Search Results (108)

In this paper, cultivable actinobacteria were isolated, cultured, and identified from the heavily algal-bloomed waters of Taihu Lake using 16S rRNA gene sequencing. Among the isolates, a single strain exhibiting vigorous cyanocidal activity against Microcystis aeruginosa FACHB-905 was selected for further investigation. The cyanocidal efficacy and underlying mechanisms of this strain, designated TH05, were assessed through using chlorophyll content, cyanobacterial inhibition rate, and cyanobacterial cell morphology measurements. In addition, oxidative stress responses, expression of key functional genes in FACHB-905, and variations in microcystin concentrations were comprehensively evaluated. Cyanobacterial blooms caused by Microcystis aeruginosa pose serious ecological and public health threats due to the release of microcystins (MCs). In this study, we evaluated the cyanocidal activity and mechanism of a novel actinomycete strain, Streptomyces sp. TH05. Optimization experiments revealed that a light–dark cycle of 12 h/12 h, temperature of 25 °C, and pH 7 significantly enhanced cyanocidal efficacy. Under these conditions, TH05 achieved an 84.31% inhibition rate after seven days of co-cultivation with M. aeruginosa. Scanning electron microscopy revealed two distinct cyanocidal modes: direct physical attachment of TH05 mycelia to cyanobacterial cells, causing cell wall disruption, and indirect membrane damage via extracellular bioactive compounds. Biochemical analyses showed increased levels of malondialdehyde (MDA), superoxide dismutase (SOD), and catalase (CAT) during the first five days, peaking at 2.47-, 2.12-, and 1.91-fold higher than control levels, respectively, indicating elevated oxidative stress. Gene expression analysis using elf-p as a reference showed that TH05 modulated key genes associated with photosynthesis (PsaB, PstD1, PstD2, RbcL), DNA repair and stress response (RecA, FtsH), and microcystin biosynthesis (McyA, McyD). All genes were upregulated except for RbcL, which was downregulated. In parallel, microcystin content peaked at 32.25 ng/L on day 1 and decreased to 16.16 ng/L by day 9, which was significantly lower than that of the control group on day 9 (29.03 ng/L). These findings suggest that strain TH05 exhibits potent and multifaceted cyanocidal activity, underscoring its potential for application in the biological control of cyanobacterial blooms. Full article

Understanding the processes of organic nitrogen (N) mineralization to ammonium (NH₄⁺) and NH₄⁺ oxidation to nitrate (NO₃⁻), which, together, supply soil inorganic N (the sum of NH₄⁺ and NO₃⁻), is of great significance for guiding the restoration of degraded ecosystems. This study used space-for-time substitution to investigate the dynamic changes in the rates of organic N mineralization (M_Norg) and nitrification (O_NH4) in soil at different vegetation restoration stages. Soil samples were collected from grassland (3–5 years), shrub-grassland (7–8 years), early-stage shrubland (15–20 years), late-stage shrubland (30–35 years), early-stage woodland (45–50 years), and late-stage woodland (70–80 years) in the subtropical karst region of China during the dry (December) and rainy (July) seasons. The M_Norg and O_NH4 were determined using the ¹⁵N labeling technique. The soil microbial community was determined using the phospholipid fatty acid method. Soil organic carbon (SOC), total nitrogen (TN), NH₄⁺, NO₃⁻, and inorganic N contents, as well as the soil moisture content (SMC) were also measured. Our results showed that SOC and TN contents, and the SMC, as well as microbial community abundances increased markedly from grassland to the late-stage shrubland. Especially in the late-stage shrubland, the abundance of the total microbial community, bacteria, fungi, actinomycetes, and AMF in soil was significantly higher than other restoration stages. These results indicate that vegetation restoration significantly increased soil nutrient content and microbial community abundance. From grassland to the late-stage shrubland, the soil NH₄⁺, NO₃⁻, and inorganic N contents increased significantly, and the NH₄⁺:NO₃⁻ ratios changed from greater than 1 to less than 1, indicating that vegetation restoration significantly influenced soil inorganic N content and composition. As restoration progressed, the M_Norg and O_NH4 increased significantly, from 0.04 to 3.01 mg N kg⁻¹ d⁻¹ and 0.35 to 2.48 mg N kg⁻¹ d⁻¹ in the dry season, and from 3.26 to 7.20 mg N kg⁻¹ d⁻¹ and 1.47 to 10.7 mg N kg⁻¹ d⁻¹ in the rainy season. At the same vegetation restoration stage, the M_Norg and O_NH4 in the rainy season were markedly higher than those in the dry season. These results indicate that vegetation restoration and seasonal variations could significantly influence M_Norg and O_NH4. Correlation analysis showed that the increase in M_Norg during vegetation restoration was mainly attributed to the increase in SOC and TN contents, as well as the total microbial community, bacterial, fungal, actinomycetes, and AMF abundances, and that the increase in O_NH4 was mainly attributed to the increase in M_Norg and the decrease in the F: B ratio. Moreover, the M_Norg and O_NH4 showed a strong positive correlation with inorganic N content. This study clarifies that vegetation restoration in karst regions could significantly increase M_Norg and O_NH4 through enhancing soil carbon and N contents, as well as microbial community abundances, thereby increasing the available soil N supply, which could provide a theoretical basis for soil fertility regulation in future rocky desertification management. Full article

Geosmin (GSM) and 2-methylisoborneol (2-MIB), microbial-derived terpenoid compounds prevalent in aquaculture systems, impair fillet quality and disrupt physiological homeostasis in aquatic species by inducing oxidative stress and lipid peroxidation. Despite their significant impact, effective strategies for eliminating these compounds from fish tissues remain underexplored. In this study, we employed primer-mediated PCR amplification to identify strains that produce 2-MIB and GSM and evaluated the efficacy of Bacillus licheniformis strain BL23 (BL23) in suppressing S. thermocarboxydus (ST), a key contributor to terpenoid synthesis. Experimental fish were allocated to three groups (n = 30 per group): Group C (control, standard feed), Group T1 (BL23-supplemented feed), and Group T2 (BL23 + ST coculture). Probiotic concentrations in the tanks were maintained at 10⁶ CFU/mL under controlled conditions (30 °C). Tissue and aqueous samples were collected at intervals for the analysis of texture, growth performance, and terpenoid concentrations, with measurements in triplicate. Subsequently, B. licheniformis strain BL23 (BL23), which exhibits inhibitory effects against S. thermocarboxydus (ST) growth, was cultured and introduced into both fish specimens and aqueous systems. The outcomes of strain inoculation and cultivation experiments demonstrated the emergence of an inhibition zone surrounding the actinomycetes inoculated with BL23. The results from liquid coculture assays revealed a reduction in the concentration of ST from 10⁶ CFU/mL at 48 h to 10¹ CFU/mL at 72 h post-coculture with BL23 for an initial 48 h period. An analysis of fish tissue and aqueous samples confirmed that BL23 exhibited a significant inhibitory effect on the growth of ST, leading to a substantial decrease in GSM content (p < 0.05). However, no statistically significant improvements were observed in fish growth performance (weight gain, feed conversion rate) or meat texture quality parameters (hardness, elasticity). These findings present a novel approach to mitigating geosmin-induced off-flavors in aquaculture products, highlighting its potential utility in water management and aquatic food production systems. The results are particularly pertinent for the development of biological control strategies targeting microbial-derived odorants in recirculating aquaculture systems. Full article

This study reveals how microbial diversity relates to soil properties in Auricularia heimuer residue–chicken manure composting, presenting sustainable waste recycling solutions. These microbial-straw strategies are adaptable to various agroecological regions, offering flexible residue valorization approaches for local conditions, crops, and resources. This study examined the effects of composting Auricularia heimuer residue and chicken manure at three ratios (6:4, 7:3, 8:2) on soil properties, lignocellulose content, enzyme activity, microbial diversity, and maize growth. The compost was mixed into potting soil at different proportions (0:10 to 10:0). During composting, the temperature remained above 50 °C for more than 14 days, meeting safety and sanitation requirements. The composting process resulted in a pH range of 7–8, a stable moisture content of 60%, a color change from brown to gray-brown, the elimination of unpleasant odors, and the formation of loose aggregates. Lignocellulose content steadily decreased, while lignocellulosic enzyme activity and actinomycete abundance increased, indicating suitability for field application. Compared with the control (CK), total nitrogen, total phosphorus, and total potassium in the soil increased by 57.81–77.91%, 4.5–19.28%, and 301.09–577.2%, respectively. Lignin, cellulose, and hemicellulose increased 50.6–83.49%, 59.6–340.33%, and 150.86–310.5%, respectively. The activities of lignin peroxidase, cellulase, and hemicellulase increased by 9.05–36.31%, 6.7–36.66%, and 37.39–52.16%, respectively. Maize root weight, plant biomass, and root number increased by 120.87–138.59%, 117.83–152.86%, and 29.03–75.81%, respectively. In addition, composting increased the relative abundance of actinomycetes while decreasing the abundance of ascomycetes and ascomycetes. The relative abundance of Sphingomonas and Gemmatimonas increased, whereas pathogenic fungi such as Cladosporium and Fusarium decreased. Compost application also enhanced bacterial and fungal diversity, with bacterial diversity indices ranging from 6.744 to 9.491 (B1), 5.122 to 9.420 (B2), 8.221 to 9.552 (B3), and 6.970 to 9.273 (CK). Fungal diversity indices ranged from 4.811 to 8.583 (B1), 1.964 to 9.160 (B2), 5.170 to 9.022 (B3), and 5.893 to 7.583 (CK). Correlation analysis of soil physicochemical properties, lignocellulose content, enzymes, microbial community composition, and diversity revealed that total nitrogen, total phosphorus, total potassium, and lignocellulose content were the primary drivers of rhizosphere microbial community dynamics. These factors exhibited significant correlations with the dominant bacterial and fungal taxa. Additionally, bacterial and fungal diversity increased with the incorporation of Auricularia heimuer residue. In conclusion, this study elucidates the relationships between microbial diversity and soil properties across different proportions of Auricularia heimuer residue and chicken manure composting, offering alternative strategies for waste recycling and sustainable agricultural development. At present, the production of biobiotics using waste culture microorganisms is still in the laboratory research stage, and no expanded experiments have been carried out. Therefore, how to apply waste bacterial bran to the production of biocontrol biotics on a large scale needs further research. Full article

Introduction: Functional gastrointestinal disorders (FGIDs) are common comorbidities that affect the life quality of children with autism. Objective: This study investigated the link between clinical history and specific colonic fecal microbiota (CFM) markers with the pathophysiology of FGIDs in young children with autism patients. Methods: Thirty-nine young patients (2 and 18 years) were included in the study of FGIDs (+) cases (n = 18) and FGIDs (-) (n = 21) controls. Gastrointestinal disorders were diagnosed by standardized clinical tools (ROMA-IV and six-item gastrointestinal severity index), while bacterial markers, including Bacteroidetes, Firmicutes, Actinomycetes (Phyla); Lactobacillales, Clostridiales, Bifidobacteriales (Orders); B. fragilis, F. prausnitzii, B. longum, D. vulgaris and A. muciniphila (Species), were detected by targeting 16S rRNA and two-step PCR protocol. Results: The overall prevalence of FGIDs was significantly (p < 0.05) associated with cesarean delivery, the duration of milk formula consumption, and the presence of early intestinal symptoms during infancy. Furthermore, Bacteroidetes, Lactobacillales, B. longum, D. vulgaris, and A. muciniphila concentrations were significantly (p ≤ 0.03) higher in stool of patients with moderate symptoms, compared to those who were asymptomatic. Conclusions: Our results suggest that the CFM composition is a potential physiological predictor of FGID pathophysiology in a severity-dependent way in children with autism. Full article

This study investigated the effect of different culture agar media, derived from Bennett’s medium, on the antimicrobial activity of 15 Streptomyces sp. and 1 Lentzea sp. strains isolated from mining environments. The media were prepared from the standard Bennett’s medium by suppressing one, two, or three ingredients—yeast extract (YE), beef extract (BE), or casein (Cas)—while maintaining glucose (Gluc) or by substituting it with fructose (Fruc) or galactose (Gal) and keeping the same suppressions. The antimicrobial activity was investigated against Candida albicans ATCC 10231, Staphylococcus aureus ATCC 29213, Bacillus subtilis ATCC 6633, and Escherichia coli K12. The antimicrobial activity of actinomycete strains was positively influenced by media modifications, though the response was actinomycete strain and target pathogen-dependent. Unexpectedly, thirteen strains exhibited poor growth on a pure agar-agar medium, including six Streptomyces strains (AS34, AS3, BS59, BS68, BS69, and DAS104) that showed notable antimicrobial activity, with inhibition zone diameters ranging from 10.75 ± 1.06 to 18.00 ± 0.00 mm. Modifications of Bennett’s medium, including replacing glucose with fructose or galactose and maintaining yeast extract or both yeast extract and beef extract, induced and enhanced the antimicrobial activity of several actinomycete strains. Notably, the new media induced antimicrobial activity in strains that showed no activity in Bennett’s medium. They led, compared to Bennett’s medium, to the detection of eight additional active strains against S. aureus, eight against B. subtilis, six against E. coli, and four against C. albicans. This study is the first to explore the modification of Bennett’s medium, either by subtraction or substitution, in order to investigate the effect on antimicrobial activity of actinomycete strains. These results highlight the importance of the composition of culture media on inducing or boosting antimicrobial activity in Streptomyces and Lentzea. Full article

Four new kaurane-type diterpenoids, geliboluols A–D (1–4), along with one known analog (5), were isolated from the culture broth of the marine-derived rare actinomycete Actinomadura geliboluensis. The structures of compounds 1–4 were determined by spectroscopic analysis (HR-ESIMS, 1D, and 2D NMR), the MPA method, and by comparing their optical rotation values with those in the literature. The new compounds were evaluated for their cytotoxicity against seven blood cancer cell lines by a CellTiter-Glo (CTG) assay and six solid cancer cell lines by a sulforhodamine B (SRB) assay. Among the new compounds, compound 4 exhibited moderate cytotoxic activity against some blood cancer cell lines, with GI₅₀ values ranging from 2.59 to 19.64 µM, and against solid cancer cell lines with GI₅₀ values ranging from 4.34 to 7.23 µM. Full article

Salvia miltiorrhiza Bunge (S. miltiorrhiza) is one of the most commonly used bulk herbs in China; however, root rot can seriously affect its quality and yields. To minimize the use of chemical pesticides for managing this plant fungal disease, biological control utilizing microbial bio-pesticides offers a promising alternative. This study aimed to enhance the biocontrol resources available for combating S. miltiorrhiza root rot by isolating actinomycetes with antifungal activity from the rhizosphere soil of S. miltiorrhiza and identifying biocontrol actinomycetes with a preventive effect on root rot. A total of 35 actinomycetes were successfully screened from the rhizosphere soil of S. miltiorrhizae. The strain B-35 with the strongest antifungal activity was screened out through antagonizing the pathogen Fusarium solani of S. miltiorrhiza, strain morphology and 16S rRNA analysis. The antagonistic actinomycetes fermentation filtrate and crude extract could significantly destroy the mycelium and spores of Fusarium solani; the biocontrol effect of mature S. miltiorrhiza rhizome reached 83.3%, and the number of leaves, plant height and biomass in the B-35 treatment group were significantly increased compared with the control group. B-35 has a certain application potential in the biological control of root rot and the promotion of S. miltiorrhizae. The antifungal activity of actinomycetes sourced from the rhizosphere soil of S. miltiorrhiza has been demonstrated for the first time, potentially enhancing future crop quality and production. Full article

Development of native microbial consortia is crucial for the sustainable management of plant diseases in modern agriculture. This study aimed to evaluate the antagonistic potential of various microbial isolates against Rhizoctonia bataticola, a significant soil-borne pathogen. A total of 480 bacteria, 283 fungi, and 150 actinomycetes were isolated and screened using in vitro dual plate assays. Among these, isolates 5F, 131B, 223B, and 236B demonstrated the highest antagonistic activity, with inhibition rates of 88.24%, 87.5%, 81.25%, and 81.25%, respectively. The selected isolates were further assessed for abiotic stress tolerance, revealing their ability to thrive under extreme conditions. Characterization of biocontrol and plant growth-promoting activities revealed the production of siderophores, hydrogen cyanide, ammonia, chitinase, and indole-3-acetic acid, along with the solubilization of zinc and phosphorus. Compatibility tests confirmed the potential of forming effective microbial consortia, which significantly reduced the percent disease index in cluster bean. The most effective consortium, comprising Trichoderma afroharzianum 5F, Pseudomonas fluorescens 131B, Bacillus licheniformis 223B, and Bacillus subtilis 236B, achieved a 76.5% disease control. Additionally, this consortium enhanced total phenol (92.1%), flavonoids (141.6%), and antioxidant defense enzyme activities including POX (188.5%), PPOX (116.3%), PAL (71.2%), and TAL (129.9%) in cluster bean plants over the infected control, leading to substantial improvements in systemic resistance of plants. This consortium also significantly enhanced plant height, fresh weight, dry weight, number of pods per plant, and seed yield over the infected control as well as mock control. This study underscores the potential of these robust microbial consortia as a sustainable and effective strategy for managing R. bataticola and enhancing crop productivity under extreme environmental conditions. Full article

One of the major global health threats in the present era is antibiotic resistance. Biosynthesized iron oxide nanoparticles (FeNPs) can combat microbial infections and can be synthesized without harmful chemicals. In the present investigation, 16S rRNA gene sequencing was used to discover Streptomyces sp. SMGL39, an actinomycete isolate utilized to reduce ferrous sulfate heptahydrate (FeSO₄.7H₂O) to biosynthesize FeNPs, which were then characterized using UV–Vis, XRD, FTIR, and TEM analyses. Furthermore, in our current study, the biosynthesized FeNPs were tested for antimicrobial and antibiofilm characteristics against different Gram-negative, Gram-positive, and fungal strains. Additionally, our work examines the biosynthesized FeNPs’ molecular docking and binding affinity to key enzymes, which contributed to bacterial infection cooperation via quorum sensing (QS) processes. A bright yellow to dark brown color shift indicated the production of FeNPs, which have polydispersed forms with particle sizes ranging from 80 to 180 nm and UV absorbance ranging from 220 to 280 nm. Biosynthesized FeNPs from actinobacteria significantly reduced the microbial growth of Fusarium oxysporum and L. monocytogenes, while they showed weak antimicrobial activity against P. aeruginosa and no activity against E. coli, MRSA, or Aspergillus niger. On the other hand, biosynthesized FeNPs showed strong antibiofilm activity against P. aeruginosa while showing mild and weak activity against B. subtilis and E. coli, respectively. The collaboration of biosynthesized FeNPs and key enzymes for bacterial infection exhibits hydrophobic and/or hydrogen bonding, according to this research. These results show that actinobacteria-biosynthesized FeNPs prevent biofilm development in bacteria. Full article

Granulomatous lobular mastitis (GLM) is a rare benign breast inflammatory disease that affects women of childbearing age. Corynebacterium species, especially Corynebacterium kroppenstedtii, was reported as the pathogen of GLM. A recent study showed that the C. kroppenstedtii complex is composed of C. kroppenstedtii and two novel species, C. parakroppenstedtii and C. pseudokroppenstedtii. The study presents seven C. kroppenstedtii-like strains isolated from GLM patients. However, they turned out to be six strains of C. parakroppenstedtii and one strain of C. pseudokroppenstedtii according to 16sRNA sequencing. In order to conduct a phylogenetic study, we further sequenced the fusA and rpoB genes, which were frequently employed in studies of Corynebacterium species. Novel Mass Spectral Peaks (MSPs) for C. parakroppenstedtii were created with Bruker MALDI-TOF MS. Then, the identification power of the MSPs was tested by C. parakroppenstedtii strains and remotely related Corynebacterum spp. The antibiotic sensitivity tests were performed according to the CLSI M45 guidelines. All of the strains were not resistant to β-lactams, vancomycin or linezolid. However, applying erythromycin and clindamycin could be fruitless. Phenotypic identification using a Vitek2 ANC ID card proved all of the C. parakroppenstedtii strains were identified as Actinomycete naeslundii. The test of Ala-Phe-Pro arylamidase and urease could be employed as the characteristics to distinguish C. pseudokroppenstedtii from C. parakroppenstedtii. Here, we present the identification, antibiotic sensitivity tests (ASTs) and epidemiological investigation of two novel C. kroppenstedtii-like species with the purpose of improving the understanding of C. kroppenstedtii-like species and related diseases. Full article

The improper treatment of crop straw not only leads to resource wastage but also adversely impacts the ecological environment. However, the application of microorganisms can accelerate the decomposition of crop straw and improve its utilization. In this study, cellulose-degrading microbial strains were isolated from naturally decayed corn straw and screened using Congo red staining, along with assessing variations in carboxymethyl cellulase (CMCase) activity, filter paper enzyme (FPase) activity and β-glucosidase (β-Gase) activity, as well as the degradation rate. The eight strains, namely Neurospora intermedia isolate 29 (A1), Streptomyces isolate FFJC33 (A2), Gibberella moniliformis isolate FKCB-009 (A3), Fusarium fujikuroi isolate EFS3(2) (A4), Fusarium Fujikuroi isolate FZ04 (A5), Lysine bacillus macroides strain LNHL43 (B1), Bacillus subtilis strain MPF30 (B2) and Paenibacilli lautus strain ALEB-P1 (C), were identified and selected for microbial strain consortium design based on their high activities of CMCase, FPase and β-Gase. The fungi, bacteria and actinomycete strains were combined without antagonistic effects on corn straw decomposition. The results showed the A2B2 combination had a significantly higher FPase at 55.44 U/mL and β-Gase at 25.73 U/mL than the other two strain combinations (p < 0.05). Additionally, the degradation rate of this combination was 40.33%, which was considerably higher than that of the other strains/consortia. The strain combination A4B2C also had superior enzyme activity, including CMCase with a value of 35.03 U/mL, FPase with a value of 63.59 U/mL and β-Gase with a value of 26.15 U/mL, which were significantly different to those of the other three strain combinations (p < 0.05). Furthermore, seven single microbial strains with high cellulase activities were selected to construct various microbial consortiums for in situ composting in order to evaluate their potential. Taken as a whole, the results of composting, including temperature, moisture content, pH, E4/E6 value and seed germination index, indicated that the microbial strain consortium consisting of Neurospora intermediate isolate 29, Fusarium fujikuroi isolate EFS3(2), Fusarium fujikuroi isolate FZ04, Lysinibacillus macrolides, Lysinibacillus sphaericus, Bacillus subtilis and Paenibacillus lautus was advantageous for corn straw decomposition and yielded high-quality compost. The screened flora was able to effectively degrade corn straw. This study provides a novel solution for the construction of a microbial consortium for the composting of corn straw. Full article

Deep-sea environments, as relatively unexplored extremes within the Earth’s biosphere, exhibit notable distinctions from terrestrial habitats. To thrive in these extreme conditions, deep-sea actinomycetes have evolved unique biochemical metabolisms and physiological capabilities to ensure their survival in this niche. In this study, five actinomycetes strains were isolated and identified from the Mariana Trench via the culture-dependent method and 16S rRNA sequencing approach. The antimicrobial activity of Microbacterium sp. B1075 was found to be the most potent, and therefore, it was selected as the target strain. Molecular networking analysis via the Global Natural Products Social Molecular Networking (GNPS) platform identified 25 flavonoid compounds as flavonoid secondary metabolites. Among these, genistein was purified and identified as a bioactive compound with significant antibacterial activity. The complete synthesis pathway for genistein was proposed within strain B1075 based on whole-genome sequencing data, with the key gene being CHS (encoding chalcone synthase). The expression of the gene CHS was significantly regulated by high hydrostatic pressure, with a consequent impact on the production of flavonoid compounds in strain B1075, revealing the relationship between actinomycetes’ synthesis of flavonoid-like secondary metabolites and their adaptation to high-pressure environments at the molecular level. These results not only expand our understanding of deep-sea microorganisms but also hold promise for providing valuable insights into the development of novel pharmaceuticals in the field of biopharmaceuticals. Full article

An ethyl acetate extract of a marine actinomycete strain, Nocardiopsis mentallicus SCSIO 53858, isolated from a deep-sea sediment sample in the South China Sea, exhibited anti-quorum-sensing (QS) activity against Chromobacterium violaceum CV026. Guided by the anti-QS activity, a novel active compound was isolated and purified from the extract and was identified as 2,3-dimethoxycinnamic acid (2,3-DCA) through spectral data analysis. At a concentration of 150 μg/mL, 2,3-DCA exhibited robust inhibitory effects on three QS-regulated traits of C. violaceum CV026: violacein production, swarming motility, and biofilm formation, with inhibition rates of 73.9%, 65.9%, and 37.8%, respectively. The quantitative reverse transcription polymerase chain reaction results indicated that 2,3-DCA can disrupt the QS system in C. violaceum CV026 by effectively suppressing the expression of QS-related genes, including cviR, vioA, vioB, and vioE. Molecular docking analysis revealed that 2,3-DCA hinders the QS system by competitively binding to the same binding pocket on the CviR receptor as the natural signal molecule N-hexanoyl-L-homoserine lactone. Collectively, these findings suggest that 2,3-DCA exhibits promising potential as an inhibitor of QS systems, providing a potential solution to the emerging problem of bacterial resistance. Full article

Glycosylated polyene macrolides are important antifungal agents that are produced by many actinomycete species. Development of new polyenes may deliver improved antibiotics. Here, Streptomyces nodosus was genetically re-programmed to synthesise pentaene analogues of the heptaene amphotericin B. These pentaenes are of interest as surrogate substrates for enzymes catalysing unusual, late-stage biosynthetic modifications. The previous deletion of amphotericin polyketide synthase modules 5 and 6 generated S. nodosus M57, which produces an inactive pentaene. Here, the chain-terminating thioesterase was fused to module 16 to generate strain M57-16TE, in which cycles 5, 6, 17 and 18 are eliminated from the biosynthetic pathway. Another variant of M57 was obtained by replacing modules 15, 16 and 17 with a single 15–17 hybrid module. This gave strain M57-1517, in which cycles 5, 6, 15 and 16 are deleted. M57-16TE and M57-1517 gave reduced pentaene yields. Only M57-1517 delivered its predicted full-length pentaene macrolactone in low amounts. For both mutants, the major pentaenes were intermediates released from modules 10, 11 and 12. Longer pentaene chains were unstable. The novel pentaenes were not glycosylated and were not active against Candida albicans. However, random mutagenesis and screening may yet deliver new antifungal producers from the M57-16TE and M57-1517 strains. Full article