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31 pages, 21545 KB  
Article
Impact of Seafloor Morphology on Regional Sea Level Rise in the Japan Trench Region
by Magdalena Idzikowska, Katarzyna Pajak and Kamil Kowalczyk
Water 2025, 17(23), 3433; https://doi.org/10.3390/w17233433 - 3 Dec 2025
Viewed by 1281
Abstract
Seafloor morphology forms regional sea level rise (SLR), affecting ocean circulation. Although many studies have examined global sea level rise, there remains a lack of analyses that show how seafloor morphology modifies the rate and character of regional SLR. Previous studies have rarely [...] Read more.
Seafloor morphology forms regional sea level rise (SLR), affecting ocean circulation. Although many studies have examined global sea level rise, there remains a lack of analyses that show how seafloor morphology modifies the rate and character of regional SLR. Previous studies have rarely investigated the geophysical interactions between seafloor morphology and sea level modulation, leaving a gap in explaining the spatial variability of sea level trends and accelerations. The aim of the study is to assess the impact of seafloor morphology on the regional rate and character of Sea Level Rise (SLR) in the western Pacific, in the Japan Trench region. Seafloor morphology, through its interactions with gravity and circulation processes, is a major factor in how SLR trends and accelerations are determined across different locations. The analysis is based on hybrid datasets: numerical models, bathymetric data, and altimetric time series of sea level anomalies (SLA) from 1993 to 2023. SLR trends, seasonal and nodal cycles were determined at 78 virtual stations. Regional rates of sea level changes were estimated using linear regression, harmonic analysis, Continuous Wavelet Transform (CWT), and Kalman filtering. Future SLR was simulated using a modified Monte Carlo method with an AR(1) autoregressive model and a block bootstrap technique. The results indicated that SLR trends are positively correlated (r ≈ 0.9) with mean dynamic topography (MDT) and negatively correlated with depth (r ≈ –0.4), confirming the impact of ocean circulation and seafloor morphology on regional SLR. The strong, positive correlation of trends with the amplitude of the 18.61-year nodal cycle (r > 0.8) indicates the important role of long-term tidal components. The highest SLR accelerations (up to 1.7 mm/yr2) were observed in locations of seamounts and subduction zones, while in the ocean trench, the rate of change stabilized or inversed locally. The results confirm the research hypothesis—the regional rate of sea level rise depends on the morphology of the seafloor and the associated geophysical and dynamic processes. The results have wide global application, supporting the implementation of the UN Sustainable Development Goals, the development of marine protection and management policies, infrastructure planning and coastal safety. Full article
(This article belongs to the Special Issue Climate Risk Management, Sea Level Rise and Coastal Impacts)
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19 pages, 3250 KB  
Article
The Enigmatic Hadal Ophiuroid Has Found Its Place: A New Family Abyssuridae Links Ultra-Abyssal and Shallow-Water Fauna
by Alexander Martynov and Tatiana Korshunova
Diversity 2025, 17(12), 827; https://doi.org/10.3390/d17120827 - 28 Nov 2025
Viewed by 1146
Abstract
Severely understudied and poorly known ultra-abyssal (hadal) brittle-stars of the genus Abyssura were collected during a recent expedition to the Japan Trench at depths between 6183 and 6539 m and were examined for the first time for both their molecular and detailed morphological [...] Read more.
Severely understudied and poorly known ultra-abyssal (hadal) brittle-stars of the genus Abyssura were collected during a recent expedition to the Japan Trench at depths between 6183 and 6539 m and were examined for the first time for both their molecular and detailed morphological data. To date, family-level assignment of the genus Abyssura remains a complete enigma, despite a recent major reorganization of ophiuroid classification. In this study, we infer an all-family level phylogeny of the class Ophiuroidea and find phylogenetic placement for Abyssura, which turns out to be a sister taxon of another little-known ophiuroid genus, Ophiambix, found in hot-vent and cold-seep environments in association with sunken wood at depths between 146 and 5315 m. The sister relationship between the hadal genus Abyssura and the shallow-water-to-abyssal genus Ophiambix is robustly supported by our molecular data, and both external and micromorphological data for these genera are highly consistent. No similar taxa have been found in any of the currently recognized 34 ophiuroid families. Therefore, the genera Abyssura and Ophiambix are assigned to the new family, Abyssuridae fam. nov. This new family shows features of paedomorphic reduction and elucidates the linkage between fauna from both the shallower and the deepest parts of the world’s oceans and provides new insights into the global bathymetric, biogeographic, and diversity patterns of organisms. Full article
(This article belongs to the Special Issue 2025 Feature Papers by Diversity’s Editorial Board Members)
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15 pages, 3801 KB  
Article
Distribution of Suitable Habitats for Soft Corals (Alcyonacea) Based on Machine Learning
by Minxing Dong, Jichao Yang, Yushan Fu, Tengfei Fu, Qing Zhao, Xuelei Zhang, Qinzeng Xu and Wenquan Zhang
J. Mar. Sci. Eng. 2024, 12(2), 242; https://doi.org/10.3390/jmse12020242 - 30 Jan 2024
Cited by 3 | Viewed by 2769
Abstract
The soft coral order Alcyonacea is a common coral found in the deep sea and plays a crucial role in the deep-sea ecosystem. This study aims to predict the distribution of Alcyonacea in the western Pacific Ocean using four machine learning-based species distribution [...] Read more.
The soft coral order Alcyonacea is a common coral found in the deep sea and plays a crucial role in the deep-sea ecosystem. This study aims to predict the distribution of Alcyonacea in the western Pacific Ocean using four machine learning-based species distribution models. The performance of these models is also evaluated. The results indicate a high consistency among the prediction results of the different models. The soft coral order is primarily distributed in the Thousand Islands Basin, Japan Trench, and Thousand Islands Trench. Water depth and silicate content are identified as important environmental factors influencing the distribution of Alcyonacea. The RF, Maxent, and XGBoost models demonstrate high accuracies, with the RF model exhibiting the highest prediction accuracy. However, the Maxent model outperforms the other three models in data processing. Developing a high-resolution, high-accuracy, and high-precision habitat suitability model for soft corals can provide a scientific basis and reference for China’s exploration and research in the deep sea field and aid in the planning of protected areas in the high seas. Full article
(This article belongs to the Section Marine Ecology)
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36 pages, 13567 KB  
Article
Additions to the Pacific Fauna of Haplomunnidae (Isopoda: Asellota) with Descriptions of Three New Species from the Kuril–Kamchatka Trench Region
by Olga A. Golovan, Marina V. Malyutina and Svetlana N. Sharina
Diversity 2023, 15(7), 850; https://doi.org/10.3390/d15070850 - 12 Jul 2023
Cited by 1 | Viewed by 3067
Abstract
Three new species of the rare deep-sea family Haplomunnidae are described from the abyssal of the Northwestern (NW) Pacific adjacent to the Kuril–Kamchatka Trench (KKT) based on material collected during the deep-sea expeditions KuramBio (2012) and SokhoBio (2015). Previously, only three species of [...] Read more.
Three new species of the rare deep-sea family Haplomunnidae are described from the abyssal of the Northwestern (NW) Pacific adjacent to the Kuril–Kamchatka Trench (KKT) based on material collected during the deep-sea expeditions KuramBio (2012) and SokhoBio (2015). Previously, only three species of the genus Haplomunna Richardson, 1908 were described in the whole North Pacific, including one species from its western part. Haplomunna kurilensis Golovan and Malyutina sp. nov., closely resembling H. japonica (Gamô, 1983) from the upper hadal of the Japan Trench, was the most numerous haplomunnid species in the studied region. Thylakogaster wilsoni Malyutina and Golovan sp. nov., and Abyssaranea minuta Golovan and Malyutina sp. nov., are the first species of their genera described from the Pacific Ocean. For H. kurilensis sp. nov. and T. wilsoni sp. nov., DNA sequences were obtained for 18S rRNA and 28S rRNA genes. The phylogenetic relationship between these species, as well as their position within the Haplomunnidae, were reconstructed using 18S rDNA. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Diversity of Deep-Sea Benthic Isopods)
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13 pages, 21616 KB  
Article
Links between Ikaite Morphology, Recrystallised Ikaite Petrography and Glendonite Pseudomorphs Determined from Polar and Deep-Sea Ikaite
by Bo Pagh Schultz, Jennifer Huggett, Clemens V. Ullmann, Heidemarie Kassens and Martin Kölling
Minerals 2023, 13(7), 841; https://doi.org/10.3390/min13070841 - 22 Jun 2023
Cited by 11 | Viewed by 3023
Abstract
Petrography of recrystallised ikaite from Ocean Drilling Program material has been presented previously from Nankai Trough and Congo (ex-Zaire) deep-sea fan. This paper expands on the Nankai Trough ikaite observations, drawing on evidence from Laptev Sea, South Georgia, Okhotsk Sea, and coastal lagoon [...] Read more.
Petrography of recrystallised ikaite from Ocean Drilling Program material has been presented previously from Nankai Trough and Congo (ex-Zaire) deep-sea fan. This paper expands on the Nankai Trough ikaite observations, drawing on evidence from Laptev Sea, South Georgia, Okhotsk Sea, and coastal lagoon Point Barrow. However, even though many ikaite and glendonite sites occur at high latitudes, it cannot be that ikaite forms exclusively in polar environments, as demonstrated by the occurrences in the low latitude low temperature deep sea sediments offshore Gulf of Guinea (Angola Congo) and mid-latitude deep-sea trenches offshore Japan. Recrystallised ikaite occurs as mm large, zoned calcite crystals in all samples, along with secondary phases of calcite. Our data set is unique in that the origin, storage, and recrystallisation process of natural formed ikaite is recorded in detail and confirms that glendonite petrographic characteristics are a consequence of the structure and chemistry of recrystallising ikaite and not the physical or geochemical environment. The transformation of man-made ikaite to calcite as recorded in laboratory studies, is a process very similar to the one we have observed for natural ikaite. Most significant is that there is variation in the order of the calcite types within a single sample, leading to the conclusion that the variation is a consequence of impurities and geochemical variability in the ikaite, not the external environment. Morphological observations reveal similarities in ikaite and glendonite, this and the similarity in internal textures in glendonite and recrystallised ikaite confirms that glendonite may be used as an indicator of past presence of ikaite. Full article
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16 pages, 8678 KB  
Article
Impact of Ambiguity of Physical Properties of Three-Dimensional Crustal Structure Model on Coseismic Slip and Interseismic Slip Deficit in the Nankai Trough Region
by Sota Murakami, Tsuyoshi Ichimura, Kohei Fujita, Takane Hori and Yusaku Ohta
GeoHazards 2022, 3(2), 162-177; https://doi.org/10.3390/geohazards3020009 - 6 Apr 2022
Cited by 1 | Viewed by 3736
Abstract
Since huge earthquakes are expected along plate subduction zones such as the Japan Trench and Nankai Trough, the estimation of coseismic slip and interseismic slip deficit is essential for immediate response and preliminary measures to reduce damage. Recently, analysis considering the complex topography [...] Read more.
Since huge earthquakes are expected along plate subduction zones such as the Japan Trench and Nankai Trough, the estimation of coseismic slip and interseismic slip deficit is essential for immediate response and preliminary measures to reduce damage. Recently, analysis considering the complex topography and underground structure of the plate subduction zone has been performed for improving the estimation performance. However, the three-dimensional (3D) crustal structural model needs to be improved continuously. In this paper, we obtained Green’s functions for 3D crustal structural models with ambiguity by 3D crustal deformation analysis, and the coseismic slip and interseismic slip deficit were estimated. Here we enabled the calculation of many Green’s functions with different physical properties of the 3D crustal structure by utilizing a GPU-based 3D crustal deformation analysis method that significantly reduces the analysis cost. The physical properties on the upper plate’s side, which are located above the plate boundary fault, were changed. We found no significant difference in the estimation performance, except for the upper crust, which most of the fault slip area is in contact with, in the case of coseismic slip estimation. In contrast, the coseismic slip estimation when the properties of the upper crust was changed had a significant error, and a negative slip was estimated at the deep part of the plate boundary where no slip was originally given. Full article
(This article belongs to the Special Issue Advanced Numerical Simulation for Earthquake Hazards and Disasters)
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33 pages, 17246 KB  
Article
Geochemical Variation of Miocene Basalts within Shikoku Basin: Magma Source Compositions and Geodynamic Implications
by Shuang-Shuang Chen, Tong Hou, Jia-Qi Liu and Zhao-Chong Zhang
Minerals 2021, 11(1), 25; https://doi.org/10.3390/min11010025 - 28 Dec 2020
Cited by 3 | Viewed by 5188
Abstract
Shikoku Basin is unique as being located within a trench-ridge-trench triple junction. Here, we report mineral compositions, major, trace-element, and Sr-Nd-Pb isotopic compositions of bulk-rocks from Sites C0012 (>18.9 Ma) and 1173 (13–15 Ma) of the Shikoku Basin. Samples from Sites C0012 and [...] Read more.
Shikoku Basin is unique as being located within a trench-ridge-trench triple junction. Here, we report mineral compositions, major, trace-element, and Sr-Nd-Pb isotopic compositions of bulk-rocks from Sites C0012 (>18.9 Ma) and 1173 (13–15 Ma) of the Shikoku Basin. Samples from Sites C0012 and 1173 are tholeiitic in composition and display relative depletion in light rare earth elements (REEs) and enrichment in heavy REEs, generally similar to normal mid-ocean ridge basalts (N-MORB). Specifically, Site C0012 samples display more pronounced positive anomalies in Rb, Ba, K, Pb and Sr, and negative anomalies in Th, U, Nb, and Ta, as well as negative Nb relative to La and Th. Site 1173 basalts have relatively uniform Sr-Nd-Pb isotopic compositions, close to the end member of depleted mantle, while Site C0012 samples show slightly enriched Sr-Nd-Pb isotopic signature, indicating a possible involvement of enriched mantle 1 (EM1) and EM2 sources, which could be attributed to the metasomatism of the fluids released from the dehydrated subduction slab, but with the little involvement of subducted slab-derived sedimentary component. Additionally, the Shikoku Basin record the formation of the back-arc basin was a mantle conversion process from an island arc to a typical MORB. The formation of the Shikoku Basin is different from that of the adjacent Japan Sea and Parece Vela Basin, mainly in terms of the metasomatized subduction-related components, the nature of mantle source, and partial melting processes. Full article
(This article belongs to the Special Issue Petrography, Mineralogy, and Geochemistry of Basalts)
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21 pages, 5078 KB  
Article
Method for Near-Real Time Estimation of Tsunami Sources Using Ocean Bottom Pressure Sensor Network (S-Net)
by Mayu Inoue, Yuichiro Tanioka and Yusuke Yamanaka
Geosciences 2019, 9(7), 310; https://doi.org/10.3390/geosciences9070310 - 12 Jul 2019
Cited by 17 | Viewed by 6400
Abstract
A dense cabled observation network, called the seafloor observation network for earthquakes and tsunami along the Japan Trench (S-net), was installed in Japan. This study aimed to develop a near-real time tsunami source estimation technique using the ocean bottom pressure data observed at [...] Read more.
A dense cabled observation network, called the seafloor observation network for earthquakes and tsunami along the Japan Trench (S-net), was installed in Japan. This study aimed to develop a near-real time tsunami source estimation technique using the ocean bottom pressure data observed at those sensors in S-net. Synthetic pressure waveforms at those sensors were computed for 64 earthquake tsunami scenarios with magnitude ranging between M8.0 and M8.8. The pressure waveforms within a time window of 500 s after an earthquake were classified into three types. Type 1 has the following pressure waveform characteristic: the pressure decreases and remains low; sensors exhibiting waveforms associated with Type 1 are located inside a co-seismic uplift area. The pressure waveform characteristic of Type 2 is that one up-pulse of a wave is within the time window; sensors exhibiting waveforms associated with Type 2 are located at the edge of the co-seismic uplift area. The other pressure waveforms are classified as Type 3. Subsequently, we developed a method to estimate the uplift area using those three classifications of pressure waveforms at sensors in S-net and a method to estimate earthquake magnitude from the estimated uplift area using a regression line. We systematically applied those methods for two cases of previous large earthquakes: the 1952 Tokachi-oki earthquake (Mw8.2) and the 1968 Tokachi-oki earthquake (Mw8.1). The locations of the large computed uplift areas of the earthquakes were well defined by the estimated ones. The estimated magnitudes of the 1952 and 1968 Tokachi-oki earthquakes from the estimated uplift area were 8.2 and 7.9, respectively; they are almost consistent with the moment magnitudes derived from the source models. Those results indicate that the tsunami source estimation method developed in this study can be used for near-real time tsunami forecasts. Full article
(This article belongs to the Special Issue Interdisciplinary Geosciences Perspectives of Tsunami Volume 2)
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16 pages, 2710 KB  
Article
Tsunamigenic Earthquakes at Along-dip Double Segmentation and Along-strike Single Segmentation near Japan
by Junji Koyama, Motohiro Tsuzuki and Kiyoshi Yomogida
J. Mar. Sci. Eng. 2015, 3(4), 1178-1193; https://doi.org/10.3390/jmse3041178 - 29 Sep 2015
Cited by 1 | Viewed by 8240
Abstract
A distinct difference of the earthquake activity in megathrust subduction zones is pointed out, concerning seismic segmentations in the vicinity of Japan—that is, the apparent distribution of earthquake hypocenters characterized by Along-dip Double Segmentation (ADDS) and Along-strike Single Segmentation (ASSS). ADDS is double [...] Read more.
A distinct difference of the earthquake activity in megathrust subduction zones is pointed out, concerning seismic segmentations in the vicinity of Japan—that is, the apparent distribution of earthquake hypocenters characterized by Along-dip Double Segmentation (ADDS) and Along-strike Single Segmentation (ASSS). ADDS is double aligned seismic-segmentation of trench-ward seismic segments along the Japan Trench and island-ward seismic segments along the Pacific coast of the Japan Islands. The 2011 Tohoku-oki megathrust earthquake of Mw9.0 occurred in ADDS. In the meantime, the subduction zone along the Nankai Trough, the western part of Japan, is the source region of a multiple rupture of seismic segments by the 1707 Houei earthquake, the greatest earthquake in the history of Japan. This subduction zone is narrow under the Japan Islands, which is composed of single aligned seismic-segmentation side by side along the Nankai Trough, which is typical of ASSS. Looking at the world seismicity, the 1960 and 2010 Chile megathrusts, for example, occurred in ASSS, whereas the 1952 Kamchatka and the 1964 Alaska megathrusts occurred in ADDS. These megathrusts in ADDS result from the rupture of strong asperity in the trench-ward seismic segments. Since the asperity of earthquakes in ASSS is concentrated in the shallow part of subduction zones and the asperity of frequent earthquakes in ADDS is in deeper parts of the island-ward seismic segments than those of ASSS, there must be a difference in tsunami excitations due to earthquakes in ADDS and ASSS. An analysis was made in detail of tsunami and seismic excitations of earthquakes in the vicinity of Japan. Tsunami heights of ASSS earthquakes are about two times larger than those of ADDS earthquakes with the same value of seismic moment. The reason for this different tsunami excitation is also considered in relation to the seismic segmentations of ADDS and ASSS. Full article
(This article belongs to the Special Issue Tsunami Science and Engineering)
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