Search Results (73)

The paper presents the results of a microfossil study of Holocene sediments in the Yana River flow zone in the southeastern part of the Laptev Sea. A rich diatom flora (242 species and intraspecific taxa, of which 177 species are freshwater) was revealed; additionally, five species of marine tintinnids (planktonic ciliates) and 15 species of freshwater testate amoebae (testacean) were discovered for the first time in the sea sediments. Three assemblages of microfossils reflecting the phases of environmental changes during the Holocene transgression are distinguished in the studied sediments of core LV83-32. Assemblage 1 was formed under terrestrial conditions (assemblage of diatoms Eunotia-Pinnularia and testacean Difflugia-Cylindrifflugia-Centropyxis), assemblage 2 in the zone of mixing of sea and fresh waters (assemblages of diatoms Cyclotella striata-Aulacoseira, Thalassiosira hyperborea-Chaetoceros and T. hyperborea-Aulacoseira, testacean Cyclopyxis kahli, tintinnids Tintinnopsis fimbriata), and assemblage 3 reflects modern conditions in the inner shelf of the Laptev Sea under the strong influence of river runoff (assemblage of diatoms T. hyperborea-Aulacoseira-M. arctica and tintinnids Tintinnopsis ventricosoides). Changes in the natural environment in the coastal part of the Laptev Sea shelf during the Holocene, established by microfossil assemblages, are confirmed by geochemical data. Full article

With rapid economic and social development, eutrophication in coastal areas is currently one of the most severe environmental problems worldwide. However, our understanding of the response of the phytoplankton community structure to the intensification of coastal eutrophication is still relatively limited. Here, seasonal phytoplankton, environmental factors, and nutrients were investigated in 2009 and 2019 in Zhanjiang Bay, where eutrophication has intensified in recent years, to analyze the variation in nutrient structure and its impact on the phytoplankton community. The results revealed that the DIP and DSI concentrations in 2019 were higher than those in 2009. However, dissolved inorganic nitrogen (DIN) has decreased substantially over the past several decades, which is due mainly to the decrease in anthropogenic nitrogen emissions, the substantial increase in the intrusion of high-salinity seawater, and the high-phosphorus wastewater discharged from urban industries. This resulted in a decrease in phytoplankton cell abundance, phytoplankton composition, and species diversity (H′) in 2019 compared with 2009. In addition, the superior N transport, storage, and response strategy to a low N supply of diatoms, especially Skeletonema and Chaetoceros, might benefit the growth of diatoms under low DIN conditions. The lower DIN/DIP ratio in 2019 favored the growth of diatoms, especially Skeletonema and Chaetoceros, leading diatoms to dominate the phytoplankton assemblage. This study demonstrates how changes in nutrient structure alter the community structure of phytoplankton, providing new insights into deepening our understanding of eco-environmental evolution. Full article

Mangrove forests are vital ecosystems along tropical coasts, playing crucial roles in water purification and biodiversity conservation. Diatoms, as sensitive ecological indicators, were employed in this study to evaluate the health of the mangrove forests along the Sanya River. The research involved analyzing the community structure of planktonic diatoms and water physicochemical properties during spring and winter, as well as carrying out a comprehensive assessment of the ecological health of the region in terms of four seasonal–spatial–environmental–biological indices. A total of 22 genera of planktonic diatoms were identified. In winter, Melosira sp. (34.94%), Skeletonema sp. (25.50%), and Chaetoceros sp. (15%) were dominant, with relative abundances of 34.94%, 25.50%, and 15.00%. In spring, Melosira sp. became the absolutely dominant species, averaging 70.16%. Diatom cell abundance shows both significant seasonal and spatial variation. In winter, it ranged from 0.53 to 17.4 × 10⁹ cells-L⁻¹, peaking in the midstream region, whereas in spring, it ranged from 2.48 to 21.0 × 10⁹ cells-L⁻¹, peaking at the mouth of the estuary. A higher abundance of diatoms in spring strengthens primary productivity and supports the subsequent functioning of the food chain. Diatom indices (Shannon–Wiener index H’, Pielou evenness index J, and Margalef richness index D) indicated an intermediate ecological health level for the Sanya River mangrove forests. Diversity was higher in winter than in spring, with the lowest values recorded in the midstream region. Redundancy analysis (RDA) indicated that T, pH, and PO₄³⁻ were the primary environmental drivers of diatom community succession. In spring, pH was positively correlated with T and PO₄³⁻, respectively. They drove the succession of diatom communities from diverse assemblages in winter to a single dominant species. Full article

Rainfall-induced freshwater influx is a major nutrient source in estuarine and coastal waters, often driving changes in phytoplankton community structure and blooms. In Jinhae Bay of Korea, a critical area for shellfish aquaculture, the interaction between the Nakdong River discharge and the Tsushima Warm Current creates a frontal zone conducive to phytoplankton proliferation. This study investigated the seasonal variation in phytoplankton communities, including harmful and toxin-producing species, in relation to environmental factors from February 2022 to November 2023 in Jinhae Bay. Except for the summer increase in certain dinoflagellates, diatoms, including Chaetoceros spp., Pseudo-nitzschia spp., and Skeletonema spp., dominated the phytoplankton community across seasons. In addition, nutrient influx from the Nakdong River, particularly nitrate + nitrite and silicate (p < 0.001), was a key driver of phytoplankton community structure. Spatially, phytoplankton communities differed between the inner (St. 1 and 4) and outer (St. 2 and 3) areas in the bay, likely due to the influences of seasonal river discharge, the Tsushima Warm Current, and tidal currents. Among harmful algal blooms causative species, dinoflagellate Margalefidnium polykrikoides was correlated with water temperature, exhibiting higher densities in summer. In contrast, Akashiwo sanguinea was mainly observed in winter. In addition, we found that toxin-producing dinoflagellates, such as Alexandrium catenella, Dinophysis acuminata, and Gonyaulax spinifera, were most prevalent in spring and summer, and their appearance was linked to complex interactions among freshwater influx, water temperature, and current dynamics. Our findings underscore the critical role of bay-specific oceanographic conditions, shaped by tidal and current patterns, in conjunction with riverine nutrient inputs, in driving seasonal phytoplankton blooms. This study provides valuable baseline data for understanding harmful/toxic microalgal dynamics in Jinhae Bay and offers key insights for effective coastal ecosystem management and conservation along the Korean Peninsula. Full article

This study aim to compare the extraction yield, antioxidant potential, and chemical composition of Chaetoceros costatus extracted with acetone, ethanol, and hexane. The freeze-dried diatom biomass was extracted by ultrasonication for 1 h at 40 °C. The antioxidant capacity was determined using 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging and oxygen radical absorbance capacity (ORAC), while the chemical profiles of the extracts were analyzed using high-performance liquid chromatography with high-resolution mass spectrometry with electrospray ionization (UHPLC-ESI-HRMS). The ORAC assay showed a 27% higher activity of the acetone extract, while the DPPH assay showed almost 3-fold higher DPPH inhibition. Pigments, fatty acids, sterols, and their derivatives were identified in all extracts. The chemical composition of ethanolic and acetonic extracts did not differ significantly, and hexane yielded the fewest compounds. The results of this study will contribute to extraction challenges that limit biotechnological application and exploitation of diatoms. Full article

This study investigated the impact of different nitrogen sources on the growth and biochemical composition of two diatom species, Chaetoceros calcitrans and Thalassiosira weissflogii, and evaluated their use as live feed for Litopenaeus vannamei larvae. Diatoms were cultured in a Conway medium supplemented with four nitrogen sources: potassium nitrate (control), urea, ammonium sulfate, and ammonium nitrate. In a separate experiment, white-leg shrimp larvae (300 larvae/L) at stage Nauplius 6 were fed diets consisting of C. calcitrans, T. weissflogii, or a combination of both diatoms under controlled conditions. The results indicated that urea, ammonium nitrate, and ammonium sulfate significantly enhanced the growth and nutrient composition of C. calcitrans and T. weissflogii compared to the control (potassium nitrate). In C. calcitrans, ammonium nitrate significantly increased protein and lipid contents, while carbohydrate levels were the highest in the control. Similarly, urea and ammonium sulfate treatments yielded the highest lipid levels, whereas the control exhibited the lowest. For T. weissflogii, the control achieved the highest cell count on day 4, but ammonium nitrate significantly improved protein and lipid contents while reducing carbohydrate levels. A mixed diet of C. calcitrans and T. weissflogii significantly enhanced growth performance and reduced mortality rates in L. vannamei larvae compared to single-species diets. In conclusion, the findings indicated that ammonium nitrate was an efficient nitrogen source for enhancing diatom growth. Additionally, combining C. calcitrans and T. weissflogii as a diet improved growth and survival of L. vannamei larvae, offering practical implications for aquaculture. Full article

Chaetoceros muelleri and Isochrysis zhanjiangensis, known for their rapid reproduction, small size, and rich nutritional content, are commonly used as feed microalgae in aquaculture. This study aimed to sterilize these microalgal species and assess the effects of antibiotics on their algal cell density. Phycospheric bacteria were isolated and identified using the spread plate method and 16S rDNA sequencing, and antibiotic susceptibility tests were conducted using four antibiotics: ampicillin, streptomycin, kanamycin, and gentamicin sulfate. A sterile system was established for C. muelleri using ampicillin, streptomycin, and gentamicin, and for I. zhanjiangensis using kanamycin, ampicillin, and streptomycin. Based on the results, antibiotics with sterilization effects were selected and added to the algal cultures. Their effects on cell density were evaluated during a six-day co-culture. Ampicillin and streptomycin effectively inhibited bacteria associated with C. muelleri, initially increasing algal cell density but later causing a decline. For I. zhanjiangensis, kanamycin and ampicillin were effective, with kanamycin significantly promoting growth throughout the cycle, achieving a 36.92% higher cell density on day six (p < 0.05). Full article

Yap diatoms—from freshwater streams through estuaries and mangroves to the marine coral reefs—had been sampled in 1988 and 2014 and a few species from the 1988 collections described in a 2009 report. The present paper documents 168 new records, including seven new species, mostly from coral reef habitats, but including some interesting new species from mangroves, and incorporates records published in taxonomic papers. In addition, 44 Mastogloia records were published separately, bringing the taxon total to 245. In the present paper, 32 records are new for Micronesia, while many others are species described from neighboring Guam in the past 15 years. The total represents probably less than one-quarter of the species present on the reef because many specimens of Navicula, Nitzschia, Amphora, etc., have so far been identified only to genus. Floristic studies of benthic diatoms are limited partly by the shortage of taxonomic studies, and we present the taxa for which we can make reasonable arguments for identification, supporting light microscopy with scanning electron micrographs whenever possible. New taxa include Ehrenbergiopsis gen. nov. for Ehrenbergiulva hauckii; Biddulphiella cuniculopsis sp. nov.; Campylodiscus tatreauae sp. nov.; Cymatoneis belauensis from Palau and Cymatoneis yapensis from Yap; Diploneis denticulata sp. nov.; Entomoneis yudinii sp. nov.; and Nitzschia pseudohybridopsis sp. nov. Interesting new records include: Achnanthes cf. brevipes; Actinocyclus decussatus; Caloneis ophiocephala; Licmophora cf. hastata; Lyrella cf. rudiformis; and an unidentified cymatosiroid. One sediment sample included the remains of a planktonic community with Chaetoceros peruvianus, Skeletonema grevillei, Thalassiothrix gibberula and two species of Lioloma, rarely seen in the oligotrophic waters of Micronesia. Full article

Fish kills in Southeast Asia are frequently associated with harmful algal blooms (HABs) and cause significant ecological and economic impacts and can have negative effects on the sustainability of aquatic ecosystems and the fisheries they support. This paper serves as a review of fish-kill events with focus on those related to HABs within the region. It examines the causative algal species, known mechanisms of fish mortality, and socio-economic consequences in order to better understand and manage this threat to sustainable fisheries. Fish kills have been reported across multiple countries within Southeast Asia, with notable hotspots in the Philippines, Malaysia, Singapore, Indonesia, and Thailand. The common harmful microalgal species span a diverse group including dinoflagellates (Karenia spp., Karlodinium spp., Margalefidinium polykrikoides, Noctiluca scintillans), raphidophytes (Chattonella spp.), diatoms (Skeletonema spp. and Chaetoceros spp.), and cyanobacteria (Trichodesmium spp.). These microalgae lead to fish kills through mechanisms such as hypoxia, physical gill damage, and ichthyotoxin production. Freshwater fish kills linked to HABs have also been documented for the Philippines, but there is no or limited information for the region. Our review highlights the widespread and recurring nature of fish kills, their impact on fisheries and aquaculture, and challenges in managing and mitigating their effects. There are efforts at enhancing management and mitigation using clay and early warning systems. However, it is essential to further improve monitoring efforts, the development and deployment of early warning systems, and viable and holistic mitigation strategies to protect the region’s aquatic resources and dependent communities, especially as aquaculture and coastal development are increasing concurrent with a changing climate that can exacerbate the risks of fish kills and HABs in Southeast Asia. Full article

Adaptive movement in response to individual interactions represents a fundamental evolutionary solution found by both unicellular organisms and metazoans to avoid predators, search for resources or conspecifics for mating, and engage in other collaborative endeavors. Displacement processes are known to affect interspecific relationships, especially when linked to foraging strategies. Various displacement phenomena occur in marine plankton, ranging from the large-scale diel vertical migration of zooplankton to microscale interactions around microalgal cells. Among these symbiotic interactions, collaboration between the centric diatom Chaetoceros coarctatus and the peritrich ciliate Vorticella oceanica is widely known and has been recorded in several studies. Here, using 2D and 3D tracking records, we describe the movement patterns of the non-motile, chain-forming diatoms (C. coarctatus) carried by epibiotic ciliates (V. oceanica). The reported data on the Chaetoceros–Vorticella association illustrated the consortium’s ability to generate distinct motility patterns. We established that the currents generated by the attached ciliates, along with the variability in the contraction and relaxation of ciliate stalks in response to food concentration, resulted in three types of trajectories for the consortium. The characteristics of these distinct paths were determined using robust statistical methods, indicating that the different displacement behaviors allowed the consortium to adequately explore distributed resources and remain within the food-rich layers provided in the experimental containers. A simple mechanical–stochastic model was successfully applied to simulate the observed displacement patterns, further supporting the proposed mechanisms of collective response to the environment. Full article

Microalgae offer distinct advantages as a nutritional source for aquaculture and as a means of wastewater bioremediation. Studying the phycosphere bacteria and understanding their complex interactions is essential to optimizing high-quality biomass growth. This study aimed to isolate, characterize, and identify bacteria from the phycosphere of marine microalgae and to determine their potential to enhance growth, metabolism, and bioremediation capabilities of Chaetoceros calcitrans in stress nutrient-poor media simulating aquaculture wastewater enriched with nitrate, nitrite, or phosphorus. Bacterial characterization included tests for auxin and siderophore production, biofilm formation, amylase activity, phosphate solubilization, mobility, and antagonism evaluation. When Alteromonas macleodii, Bacillus cereus, and Marinobacter sp. were selected and then enriched (10⁷ CFU/mL) in co-culture with C. calcitrans, growth levels significantly increased in four of six Synthetic Aquaculture Wastewater (SAW) media. Pigment levels were higher in five of six SAW media, and lipid levels were higher in SAW rich in nitrite (SAWni50) and phosphorus (SAWpho50). In addition, C. calcitrans with or without the bacterial consortium demonstrated excellent phosphorus bioremediation, achieving 67.6% average removal in SAWpho50. Nitrate and nitrite assimilation rates were approximately 10% in SAWna and SAWni50. This study marks the inaugural identification of these bacteria as microalga growth-promoting bacteria (MGPB) for enhancing growth and lipid and pigment production in C. calcitrans, and it also documents a maximum of 69.13% phosphorus removal. Full article

Microalgae are exceptional organisms from a nutritional perspective, boasting an array of bioactive compounds that have long justified their incorporation into human diets. In this study, we explored the potential of five microalgae species: Nannochloropsis sp., Tetraselmis chuii, Chaetoceros muelleri, Thalassiosira weissflogii, and Tisochrysis lutea. We conducted comprehensive analyses of their nutritional profiles, encompassing protein content, individual amino acid composition, mineral and trace element levels, fatty acid profiles (including saturated fatty acids (SFAs), monounsaturated fatty acids (MUFAs), and polyunsaturated fatty acids (PUFAs)), polyphenol compositions, and vitamin B content. The antioxidant activity of the ethanolic extracts was evaluated using two methods: ABTS and DPPH radical scavenging assay. The total protein content of the microalgae ranged from 34.09 ± 0.39% to 42.45 ± 0.18%, with the highest concentration observed in T. weissflogii. Essential amino acids such as histidine, threonine, lysine, valine, isoleucine, leucine, phenylalanine, and methionine were present in concentrations ranging from 0.53 ± 0.02 to 12.55 ± 2.21 g/16 g N. Glutamic acid emerged as the most abundant amino acid, with concentrations ranging from 6.73 ± 0.82 to 12.55 ± 2.21 g/16 g N. Among the microalgae species, T. chuii exhibited the highest concentrations of calcium (Ca) and manganese (Mn), while C. muelleri showed prominence in magnesium (Mg), sodium (Na), and iron (Fe). T. weissflogii stood out for its potassium (K) content, and T. lutea contained notable amounts of copper (Cu), zinc (Zn), and lead (Pb). Regarding fatty acid profiles, Nannochloropsis sp. and T. chuii were predominantly composed of SFA, while C. muelleri and T. weissflogii were rich in MUFA. PUFAs dominated the fatty acid profile of T. lutea, which also exhibited the most diverse range of polyphenolic substances. We also analyzed the B vitamin content, with T. lutea displaying the highest concentrations of niacin (B₃) and riboflavin (B₂). Antioxidant activity was confirmed for all microalgae tested using DPPH and ABTS radical IC₅₀ (mg/mL) converted to Trolox equivalent (TEAC). These findings underscore the substantial potential of the examined microalgae species as sources of biologically valuable substances characterized by rapid growth and relatively undemanding cultivation conditions. Full article

Ecophysiological stress and the grazing of diatoms are known to elicit the production of chemical defense compounds called oxylipins, which are toxic to a wide range of marine organisms. Here we show that (1) the viral infection and lysis of diatoms resulted in oxylipin production; (2) the suite of compounds produced depended on the diatom host and the infecting virus; and (3) the virus-mediated oxylipidome was distinct, in both magnitude and diversity, from oxylipins produced due to stress associated with the growth phase. We used high-resolution accurate-mass mass spectrometry to observe changes in the dissolved lipidome of diatom cells infected with viruses over 3 to 4 days, compared to diatom cells in exponential, stationary, and decline phases of growth. Three host virus pairs were used as model systems: Chaetoceros tenuissimus infected with CtenDNAV; C. tenuissimus infected with CtenRNAV; and Chaetoceros socialis infected with CsfrRNAV. Several of the compounds that were significantly overproduced during viral infection are known to decrease the reproductive success of copepods and interfere with microzooplankton grazing. Specifically, oxylipins associated with allelopathy towards zooplankton from the 6-, 9-, 11-, and 15-lipogenase (LOX) pathways were significantly more abundant during viral lysis. 9-hydroperoxy hexadecatetraenoic acid was identified as the strongest biomarker for the infection of Chaetoceros diatoms. C. tenuissimus produced longer, more oxidized oxylipins when lysed by CtenRNAV compared to CtenDNAV. However, CtenDNAV caused a more statistically significant response in the lipidome, producing more oxylipins from known diatom LOX pathways than CtenRNAV. A smaller set of compounds was significantly more abundant in stationary and declining C. tenuissimus and C. socialis controls. Two allelopathic oxylipins in the 15-LOX pathway and essential fatty acids, arachidonic acid (ARA), eicosapentaenoic acid (EPA), and docosahexaenoic acid (DHA) were more abundant in the stationary phase than during the lysis of C. socialis. The host–virus pair comparisons underscore the species-level differences in oxylipin production and the value of screening more host–virus systems. We propose that the viral infection of diatoms elicits chemical defense via oxylipins which deters grazing with downstream trophic and biogeochemical effects. Full article

The habitats of giant clams are undergoing environmental changes, and giant clam populations are declining. The present study was conducted to facilitate clam conservation. We conducted three 18-week trials to investigate the effects of nutrient, temperature, and salinity on the growth performance and survival rates (SRs) of juvenile Tridacna noae, adult Tridacna crocea, and subadult Tridacna derasa, respectively. Regarding nutrient sources, no significant differences were observed in shell length gain, specific growth rate, or SR between clams fed with Chaetoceros muelleri or commercial feed (hw nanotip) and those in a control group (juvenile phototrophs). Regarding temperature, clams cultivated at 27 °C exhibited significantly better growth performance and SR than did those cultivated at 19 °C or 31 °C (p < 0.05). By week 6, all clams in the 19 °C and 31 °C groups had died, indicating that suboptimal growth temperatures have severe adverse effects. Regarding salinity, clams cultivated at 34‰ exhibited significantly higher length gains and specific growth rates than did those cultivated at 20‰ or 25‰ (p < 0.05). SR was not significantly affected by salinity. Understanding how environmental factors affect giant clam populations may help researchers devise effective clam conservation strategies. Full article

The limited availability of phosphate, nitrogen and silicon in the growth media affects the growth, cellular processes, and metabolism of diatoms. Silicon deficiency primarily affects diatom morphology, while phosphate deficiency reduces the production of nucleic acids and phospholipids. Differences in pigment and protein composition are mainly due to nitrogen deficiency. In this study, Chaetoceros socialis and Chaetoceros costatus were cultured under phosphate, nitrogen, and silicon deprivation conditions. The diatom biomass was collected during the stationary growth phase and extracted with 70% ethanol under ultrasonication. The chemical profiles of the extracts were analyzed by high-performance liquid chromatography with high-resolution mass spectrometry with electrospray ionisation (UHPLC-ESI-HRMS), while the antioxidant capacity was determined by 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging and oxygen radical absorbance capacity (ORAC) assays. Pigments, fatty acids, sterols, and derivatives were detected in both species. The total phenolic content in the extracts ranged from 46.25 ± 1.08 to 89.38 ± 6.21 mg of gallic acid equivalent (GAE)/L and from 29.58 ± 1.08 to 54.17 ± 1.18 mg GAE/L. for C. costatus and C. socialis, respectively. Antioxidant activity was higher in C. costatus extracts, especially those obtained from nitrogen-deprived media. The results of this study contribute to the existing knowledge and the ongoing efforts to overcome application and commercialization barriers of microalgae for wide-ranging potential in different industries. Full article