Search Results (148)

Arctic shelf waters exhibit high optical variability due to terrestrial inputs and elevated colored dissolved organic matter (CDOM) concentrations, posing significant challenges for the accurate retrieval of chlorophyll-a (Chl-a) and downwelling diffuse attenuation coefficients (${{\rm K}}_{\mathrm{d}}\left(\lambda \right)$). These retrieval biases contribute to substantial uncertainties in estimates of primary productivity and upper-ocean heat flux in the Arctic Ocean. However, the performance and constraints of existing ocean color algorithms in Arctic shelf environments remain insufficiently characterized, particularly under seasonally variable and optically complex conditions. In this study, we present a systematic multi-year evaluation of commonly used empirical and semi-analytical ocean color algorithms across the western Arctic shelf, based on seven expeditions and 240 in situ observation stations. Building on these evaluations, regionally optimized retrieval schemes were developed to enhance algorithm performance under Arctic-specific bio-optical conditions. The proposed OCx-AS series for Chl-a and ${{\rm K}}_{\mathrm{d}}$-DAS models for ${{\rm K}}_{\mathrm{d}}\left(\lambda \right)$ significantly reduce retrieval errors, achieving RMSE improvements of over 50% relative to global standard algorithms. Additionally, we introduce QAA-LS, a modified semi-analytical model specifically adapted for the Laptev Sea, which addresses the strong absorption effects of CDOM and corrects the significant overestimation observed in previous QAA versions. Full article

The Dehbid region, located in the southern part of the Sanandaj–Sirjan Zone (SSZ), is a significant iron oxide mining district with over 20 iron oxide deposits (IODs) and reserves of up to 50 million tons of iron oxide ores. The region features a NW–SE oriented ductile shear zone, parallel to the Zagros thrust zone, experienced significant deformation. Detailed structural studies indicate that the iron mineralization is primarily stratiform to stratabound and hosted in late Triassic to early Jurassic silicified dolomites and schists. These ore deposits consist of lenticular iron oxide orebodies and exhibit various structures and textures, including banded, laminated, folded, disseminated, and massive forms of magnetite and hematite. The Fe₂O₃ content in the mineralized layers varies from 30 to 91 wt%, whereas MnO has an average of 3.9 wt%. The trace elements are generally low, except for elevated concentrations of Cu (up to 4350 ppm) and Zn (up to 3270 ppm). Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS) analysis of magnetite reveals high concentrations of Mg, Al, Si, Mn, Ti, Cu, and Zn, with significant depletion of elements such as Ga, Ge, As, and Nb. This study refutes the hypothesis of vein-like or hydrothermal genesis, providing evidence for a sedimentary origin based on the trace element geochemistry of magnetite and LA-ICP-MS geochemical data. The Dehbid banded iron ores (BIOs) are thought to have formed under geodynamic conditions similar to those of BIOs in back-arc tectonic settings. The combination of anoxic conditions, submarine hydrothermal iron fluxes, and redox fluctuations is essential for the formation of these deposits, suggesting that similar iron–manganese deposits can form during the Phanerozoic under specific geodynamic and oceanographic conditions, particularly in tectonically active back-arc environments. Full article

Methylparaben (MP) is an important member of the paraben family of aromatic compounds, which is under great demand in the industrial market as an antibacterial agent, preservative, and feed additive, and also has potential application value in the preparation of bio-based polyetherester materials. However, the current chemical production method of MP has various problems, such as serious environmental pollution, its dependence on petrochemical resources, and the generation of different types of waste. It is of great significance to develop an environmentally friendly MP synthesis method via synthetic biology. In this work, Saccharomyces cerevisiae was used as the host to construct the biosynthetic pathway of MP and various metabolic engineering strategies were applied to break the bottlenecks in the synthesis process, including the regulation of the rate-limiting steps in the endogenous shikimate pathway, the enhancement of central carbon flux via knocking out competitive pathways and promoting precursors synthesis, and the improvement of the exogenous enzyme expression using promoter engineering. The final engineered S. cerevisiae could produce 68.59 mg/L MP in shake flasks, which was the highest titer of MP synthesized by S. cerevisiae so far. It was indicated that the strategies applied in our work were effective in promoting the synthesis of MP, which not only laid an important foundation for the industrial production of MP, but also provided a platform for the synthesis of other aromatic compounds. Full article

Integrating local, bio-sourced materials, such as earth and agricultural waste like dwarf hulls, is a sustainable solution to the challenges of climate change and increasing urbanization. The use of bio-based materials such as néré husk (Parkia biglobosa) in the manufacture of compressed earth bricks is a sustainable alternative for improving their thermal performance. This study assesses the impact of adding hulls in different forms (fine powder < 0.08 mm, aggregates from 2 mm to 5 mm, and aqueous maceration) on the thermal conductivity and effusivity of bricks. The tests were carried out using the asymmetric hot plane method, applying a constant heat flux and measuring the temperature variation via a thermocouple. Three samples of each formulation were analyzed to ensure the reliability of the results. The results show that the addition of fine powdered husk reduces the thermal conductivity of the bricks to 0.404 W/m.K and their effusivity to 922.2 W/(Km²) s¹/², compared with 0.557 W/m.K and 1000.32 W/(Km²) s¹/² for the control bricks. The addition of coarser aggregates (2 mm–5 mm) gives intermediate values (0.467 W/m.K and 907.99 W/(Km²) s¹/²). Aqueous maceration, on the other hand, results in an increase in thermal conductivity to 0.614 W/m.K. These results confirm that the shape and method of incorporation of the husk influence the thermal performance of the bricks, with fine powder offering the best thermal insulation. This approach highlights the potential of bio-based materials for eco-responsible construction. Full article

Understanding mesenchymal stem cell (MSC) behavior on glycated collagen is crucial for advancing regenerative medicine and understanding pathological mechanisms in diseases such as diabetes, cancer, and aging. While previous research has demonstrated reduced MSC interaction with glycated collagen under static conditions due to disrupted integrin signaling, these studies did not accurately replicate the dynamic mechanical environment that MSCs encounter in vivo. Here we present a comprehensive investigation comparing adipose-derived MSC (ADMSC) behavior under both dynamic flow conditions and static adhesion, revealing unexpected temporal dynamics and challenging existing paradigms of cell–matrix interactions. Using a sophisticated microfluidic BioFlux system combined with traditional static adhesion assays, we examined ADMSC interactions with native collagen for 1-day glycated (GL1), and 5-day glycated (GL5) samples. Under flow conditions, MSCs demonstrated remarkably rapid attachment—within 3–5 min—contrasting sharply with the classical 2 h static incubation protocol. This rapid adhesion was particularly enhanced on 5-day glycated collagen, though subsequent testing revealed significantly weaker adhesion strength under shear stress compared to native collagen. Static conditions also showed a distinct pattern: increased ADMSC adhesion to glycated samples within the first 30 min, followed by a progressive decrease in adhesion and compromised cell spreading over longer periods. Atomic force microscopy (AFM) analysis revealed significant changes in collagen surface properties upon glycation. These included a substantial reduction in the negative surface charge (from ~800 to 600 mV), altered surface roughness patterns (Rrms varying from 3.0 ± 0.4 nm in native collagen to 7.70 ± 0.6 nm in GL5), and decreased elasticity (Young’s modulus dropping from 34.8 ± 5.4 MPa to 2.07 ± 0.3 MPa in GL5). These physical alterations appear to facilitate rapid initial cell attachment while potentially compromising long-term stable adhesion through traditional integrin-mediated mechanisms. This study provides novel insights into the complex dynamics of MSC adhesion to glycated collagen, revealing previously unknown temporal patterns and challenging existing models of cell–matrix interactions. The findings suggest a need for revised approaches in tissue engineering and regenerative medicine, particularly in conditions where glycated collagen is prevalent. Full article

Being essential intermediates for the biosynthesis of heme, chlorophyll, and several other biologically critical compounds, porphyrins have wide practical applications. However, up till now, their bio-based production remains challenging. In this study, we identified potential metabolic factors limiting the biosynthesis of type-III stereoisomeric porphyrins in Escherichia coli. To alleviate this limitation, we developed bioprocessing strategies by redirecting more dissimilated carbon flux toward the HemD-enzymatic pathway to enhance the production of type-III uroporphyrin (UP-III), which is a key precursor for heme biosynthesis. Our approaches included the use of antioxidant reagents and strain engineering. Supplementation with ascorbic acid (up to 1 g/L) increased the UP-III/UP-I ratio from 0.62 to 2.57. On the other hand, overexpression of ROS-scavenging genes such as sod- and kat-genes significantly enhanced UP production in E. coli. Notably, overexpression of sodA alone led to a 72.9% increase in total porphyrin production (1.56 g/L) while improving the UP-III/UP-I ratio to 1.94. Our findings highlight the potential of both antioxidant supplementation and strain engineering to mitigate ROS-induced oxidative stress and redirect more dissimilated carbon flux toward the biosynthesis of type-III porphyrins in E. coli. This work offers an effective platform to enhance the bio-based production of porphyrins. Full article

The development of ultrafiltration (UF) polymeric membranes with high flux and enhanced antifouling properties bridges a critical gap in the polymeric membrane fabrication research field. In the present work, the preparation of novel PES membranes incorporated with carrageenan (CAR), which is a natural polymer derived from edible red seaweed, is reported for the first time. The PES/CAR membranes were prepared by using the nonsolvent-induced phase separation (NIPS) method at 0.1–4.0 wt.% CAR loadings in the casting solutions. The use of dimethylsulfoxide (DMSO), which is a bio-based and low-toxic solvent, is reported. Scanning electron microscopy, atomic force microscopy, water contact angle, porosity, and zeta potential measurements were used to evaluate the surface morphology, structure, pore size, hydrophilicity, and surface charge of the prepared membranes. The filtration performance of PES/CAR membranes was tested with bovine serum albumin (BSA) solutions. It was shown that CAR incorporation in the casting solutions notably increased hydrophilicity, porosity, pore size, surface charge, and fouling resistance of the prepared membranes compared with plain PES membranes due to the hydrophilic nature and pore-forming properties of CAR. The PES/CAR membranes showed a significant reduction in irreversible and total fouling during filtration of BSA solutions by 38% and 32%, respectively, an enhancement in the flux recovery ratio by 20–40%, and an improvement in mechanical properties by 1.5-fold when compared with plain PES membranes. The findings of the present study indicate that CAR can be used as a promising additive for the development of PES UF membranes with enhanced properties and performance for water treatment applications. Full article

The fraction of absorbed photosynthetically active radiation (FAPAR) is one of the bio-geophysical Essential Climate Variables assessed through remote sensing observations and distributed globally by space and environmental agencies. Any reliable remote sensing product should be benchmarked against a reference, which is normally determined by means of ground-based measurements. They should generally be aggregated spatially to be compared with remote sensing products at different resolutions. In this work, the effectiveness of various in situ sampling methods proposed to assess FAPAR from flux measurements was evaluated using a three-dimensional radiative transfer framework over eight virtual vegetated landscapes, including dense forests (leaf-on and leaf-off models), open canopies, sparse vegetation, and agricultural fields with a nominal extension of 1 hectare. The reference FAPAR value was determined by summing the absorbed PAR-equivalent photons by either all canopy components, both branches and leaves, or by only the leaves. The incoming and upwelling PAR fluxes were simulated in different illumination conditions and at a high spatial resolution (50 cm). They served to replicate in situ virtual FAPAR measurements, which were carried out using either stationary sensor networks or transects. The focus was on examining the inherent advantages and drawbacks of in situ measurement protocols against GCOS requirements. Consequently, the proficiency of each sampling technique in reflecting the distribution of incident and reflected PAR fluxes—essential for calculating FAPAR—was assessed. This study aims to support activities related to the validation of remote sensing FAPAR products by assessing the potential uncertainty associated with in situ determination of the reference values. Among the sampling schemes considered in our work, the cross shaped sampling schemes showed a particular efficiency in properly representing the pixel scale FAPAR over most of the scenario considered. Full article

The performance of photovoltaic (PV) cells is significantly influenced by their operating temperature. While conventional active cooling methods are limited by economic feasibility, passive cooling strategies often face challenges related to insufficient heat dissipation capacity. This study presents a bio-inspired evaporative heat sink, modeled on the transpiration and water transport mechanisms of plant leaves, which leverages porous media flow and heat transfer. The device uses capillary pressure, generated through the evaporation of the cooling medium under sunlight, to maintain continuous coolant flow, thereby achieving effective cooling. An experimental setup was developed to validate the device’s performance under a heat flux density of 1200 W/m², resulting in a maximum temperature reduction of 5 °C. This study also investigated the effects of porous medium thickness and porosity on thermal performance. The results showed that increasing the thickness of the porous medium reduces cooling efficiency due to reduced fluid flow. In contrast, the effect of porosity was temperature-dependent: at evaporation temperatures below 67 °C, a porosity of 0.4 provided better cooling, while at higher temperatures, a porosity of 0.6 was more effective. These findings confirm the feasibility of the proposed device and provide valuable insights into optimizing porous media properties to enhance the passive cooling of photovoltaic cells. Full article

The growing antibiotic resistance of microorganisms causing postoperative infections following orthopedic surgeries underscores the urgent need for localized antiseptic and lavage delivery systems to enhance infection control. This study evaluates the in vitro effectiveness of antiseptic and lavage solutions—including polyhexanide, povidone–iodine, low-concentrated hypochlorite, Ringer’s solution, and saline—against Staphylococcus epidermidis, Staphylococcus aureus MRSA, Cutibacterium acnes, Corynebacterium amycolatum, Pseudomonas aeruginosa, and Candida albicans. Using microplate models (Minimum Inhibitory Concentration, Minimum Biofilm Eradication Concentration, and Biofilm-Oriented Antiseptic Test assays), flow-based models (Bioflux system), and surfaces relevant to orthopedic implants (e.g., stainless steel disks/screws, Co-Cr-Mo, Ti-Al-Nb orthopedic alloys, and ultra-high-molecular-weight polyethylene), as well as a bio-nano-cellulose scaffold representing tissue, we assessed the solutions’ activity. The cytotoxicity of the solutions was evaluated using osteoblast and keratinocyte cell lines, with additional in vivo insights gained through the Galleria mellonella larval model. The results show that polyhexanide-based solutions outperformed povidone–iodine in biofilm eradication in most tests applied, particularly on complex surfaces, whereas iodine demonstrated higher cytotoxicity in applied in vitro and in vivo tests. Low-concentration hypochlorite solutions exhibited minimal antibiofilm activity but also showed no cytotoxicity in cell line and G. mellonella larval models. These findings highlight the importance of careful antiseptic selection and rinsing protocols to balance infection control efficacy with tissue compatibility in orthopedic applications. Full article

The question being posed by scientists around the world is how different chemical modifications of naturally occurring compounds will affect their antimicrobial properties. In the current study, sulfur derivatives of camphor containing a sulfur atom were tested to detect their antimicrobial and antibiofilm potentials. The new compounds were tested on eight Gram-positive strains (S. aureus (3 isolates), S. epidermidis (4 isolates), and E. faecalis (1 isolate)) and eight Gram-negative strains (E. coli (6 isolates), A. baumannii (1 isolate), and P. aeruginosa (1 isolate)). The ability of the strains to eradicate a biofilm was evaluated under standard stationary and flow-through conditions using the Bioflux system. Two synthesized compounds, namely rac-thiocamphor (1a) and (S, S)-(+)-thiocamphor (2a), exhibited an effect on the 24 h biofilm formed by the Gram-positive strains. Our results are an important contribution to the science of natural compounds and allow us to classify our sulfur derivatives of camphor as potential prophylactic agents in treating skin infections, antiseptics, and disinfectants. The Gram-negative strains were excluded from further stages of the tests due to their high activity (MIC ≥ 512 µg/mL). On the other hand, the compound with the strongest antimicrobial activity against the Gram-positive strains was 2a, as it led led to a reductions in cell viability of 17–52% (for MIC), 37–66% (for 2MIC), and 40–94% (for 4MIC). In addition, the experimental retention index of thiocamphor was calculated for the first time. Full article

Bacterial adhesion to biotic and abiotic surfaces under fluid shear stress plays a major role in the pathogenesis of infections linked to medical implants and tissues. This study employed an automated BioFlux 200 microfluidic system and video microscopy to conduct real-time adhesion assays, examining the influence of shear stress on adhesion kinetics and spatial distribution of Staphylococcus aureus on glass surfaces. The adhesion rate exhibited a non-linear relationship with shear stress, with notable variations at intermediate levels. Empirical adhesion events were simulated with COMSOL Multiphysics^® and Python. Overall, COMSOL accurately predicted the experimental trend of higher rates of bacterial adhesion with decreasing shear stress but poorly characterized the plateauing phenomena observed over time. Python provided a robust mathematical representation of the non-linear relationship between cell concentration, shear stress, and time but its polynomial regression approach was not grounded on theoretical physical concepts. These insights, combined with advancements in AI and machine learning, underscore the potential for synergistic computational techniques to enhance our understanding of bacterial adhesion to surfaces, offering a promising avenue for developing novel therapeutic strategies. Full article

The development of bio-insultation materials has attracted increasing attention in building energy-saving fields. In tropical and hot–humid climates, building envelope insulation is important for an energy efficient and comfortable indoor environment. In this study, several experiments were carried out on a bio-insulation material, which was prepared by using rice husk as a raw material. Square rice husk-based insultation panels were developed, considering the ASTM C-177 dimensions, to perform thermal conductivity coefficient tests. The thermal conductivity coefficient obtained was 0.073 W/(m K), which is in the range of conventional thermal insulators. In a second phase of this study, two experimental enclosures (chambers) were constructed, one with rice husk-based insulation panels and the second one without this insulation. The measures of the temperatures and thermal flows through the chambers were obtained with an electronic module based on the ARDUINO platform. This module consisted of three DS18B20 temperature sensors and four Peltier plates. Daily temperature and heat flux data were collected for the two chambers during the dry season in Panama, specifically between April and May. In the experimental chamber that did not have rice husk panel insulation on the roof, a flow of up to 28.18 W/m² was observed, while in the chamber that did have rice husk panels, the presence of a flow toward the interior was rarely observed. The rice husk-based insulation panels showed comparable performance with conventional insulators, as a sustainable solution that takes advantage of a local resource to improve thermal comfort and the reduction of the environmental impact. Full article

This study explores the synergistic impact of zero flux and convective boundary conditions on the magnetohydrodynamic (MHD) boundary-layer slip flow of nanofluid over a moving surface, utilizing Buongiorno’s model. In a landscape of expanding nanofluid applications, understanding boundary condition interactions is crucial. Employing a systematic approach, we varied key parameters, including surface velocity, thermophoresis, Brownian motion, Eckert number, Prandtl number, and Lewis number, systematically investigating their effects on flow and heat transfer. Numerical simulations focused on critical metrics such as skin friction coefficients; Nusselt and Sherwood numbers; and temperature, concentration, and velocity profiles. Noteworthy findings include the amplifying effect of a magnetic field and viscous dissipation on temperature profiles and the dual impact of heightened velocity slip on temperature and velocity profiles, which result in a thicker concentration boundary layer. Beyond academia, we envision our research having practical applications in optimizing high-temperature processes, bio-sensors, paints, pharmaceuticals, coatings, cosmetics, and space technology. Full article

Biofuels’ induced land-use change (ILUC) emissions have been widely studied over the past 15 years. Many studies have addressed uncertainties associated with these estimates. These studies have broadly examined uncertainties associated with the choice of economic models, their assumptions and parameters, and a few bio-physical variables. However, uncertainties in land-use emission factors that represent the soil and vegetation carbon contents of various land types across the world and are used to estimate carbon fluxes due to land conversions are mostly overlooked. This paper calls attention to this important omission. It highlights some important sources of uncertainty in land-use emissions factors, explores the range in these factors from established data sources, and compares the influence of their variability on ILUC emissions for several sustainable aviation fuel (SAF) pathways. The estimated land-use changes for each pathway are taken from a well-known computable general equilibrium model, GTAP-BIO. Two well-known carbon calculator models (CCLUB and AEZ-EF) that represent two different sets of emissions factors are used to convert the GTAP-BIO estimated land-use changes to ILUC emissions. The results show that the calculated ILUC emissions obtained from these carbon calculators for each examined SAF pathway are largely different, even for the same amortization time horizon. For example, the ILUC emissions values obtained from the AEZ-EF and CCLUB models for producing jet fuel from corn ethanol for a 25-year amortization period are 24.9 gCO₂e/MJ and 15.96 gCO₂e/MJ, respectively. This represents a 60% difference between the results of these two carbon calculators for the same set of land-use changes. The results show larger differences for other pathways as well. Full article