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12 pages, 4442 KiB  
Article
Morphological Plasticity and Abundance Patterns of Arrhenia antarctica in the South Shetland Islands: Implications for Fungal Ecology in a Warming Antarctica
by Fernando Augusto Bertazzo-Silva, Jair Putzke, João Lindolfo Meira, Marisa Terezinha Lopes Putzke and Carlos Ernesto Gonçalves Reynaud Schaefer
Diversity 2025, 17(7), 489; https://doi.org/10.3390/d17070489 - 17 Jul 2025
Viewed by 279
Abstract
The formation and development of mushrooms depend on suitable conditions of humidity, substrate, and temperature. These environmental factors are directly influenced by ongoing climate change, which may alter fungal growth patterns, distribution, and morphology. However, these attributes remain inadequately investigated in Antarctic mushrooms. [...] Read more.
The formation and development of mushrooms depend on suitable conditions of humidity, substrate, and temperature. These environmental factors are directly influenced by ongoing climate change, which may alter fungal growth patterns, distribution, and morphology. However, these attributes remain inadequately investigated in Antarctic mushrooms. In this study, we examined 334 basidiomes of Arrhenia antarctica, discovered on Livingston Island in 2023. The morphological characteristics of these basidiomes were analyzed to explore how recent variations may be linked to and explained by climatic changes. Comparing the original description from over 60 years ago with the recent literature on the subject, we observed a larger pileus diameter (47.3% of basidiomes with diameters exceeding 23 mm, up to 75 mm) than previously documented (reported as up to 23 mm). Additionally, there were changes in pileus morphology, with not all of them exhibiting an umbilicate form, contrary to the references. We propose that these morphological variations may be attributed to climatic changes. The basidiomata were also found in association with pure Antarctic grass banks, prompting the question of whether Arrhenia antarctica is indeed a moss parasite. The information presented in this study aims to support ongoing research on the taxonomy and diversity of Agaricales fungi in Antarctica. Full article
(This article belongs to the Section Microbial Diversity and Culture Collections)
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13 pages, 1618 KiB  
Article
Abundance and Diversity of Endolithic Fungal Assemblages in Granite and Sandstone from Victoria Land, Antarctica
by Gerardo A. Stoppiello, Carmen Del Franco, Lucia Muggia, Caterina Ripa and Laura Selbmann
Life 2025, 15(7), 1028; https://doi.org/10.3390/life15071028 - 27 Jun 2025
Viewed by 325
Abstract
The Antarctic continent hosts highly specialized microbial ecosystems, particularly within endolithic habitats, where microorganisms colonize the interior of rocks in order to withstand conditions that otherwise cannot support life. Previous studies have characterized the composition and abundance of these communities, as well as [...] Read more.
The Antarctic continent hosts highly specialized microbial ecosystems, particularly within endolithic habitats, where microorganisms colonize the interior of rocks in order to withstand conditions that otherwise cannot support life. Previous studies have characterized the composition and abundance of these communities, as well as their different degrees of stress power; furthermore, the effect of different lithic substrates in shaping their associated bacterial assemblages has been extensively investigated. By contrast, how rock typology exerts fungal endolithic colonization still remains unexplored. In this study, we have considered and compared fungal communities inhabiting granite and sandstone rocks collected across Victoria Land, Antarctica, using high-throughput sequencing of the Internal Transcribed Spacer (ITS) region. Our analyses revealed that both rock types were dominated by Ascomycota, with a marked prevalence of lichen-forming fungi, particularly within the class Lecanoromycetes. However, granite-supported communities exhibited significantly higher species richness, likely driven by the structural heterogeneity of the substrate and the presence of fissures enabling chasmoendolithic colonization. In contrast, sandstone communities were more specialized and dominated by strict cryptoendolithic taxa capable of surviving within the rock’s pore spaces. Differential abundance analysis identified key species associated with each substrate, including the lichen Buellia frigida in granite and the black fungus Friedmanniomyces endolithicus in sandstone, two endemic species in Antarctica. Moreover, the use of presence/absence- versus abundance-based diversity metrics revealed contrasting ecological patterns; substrate type had a stronger influence on species presence, whereas geographic location more significantly shaped abundance profiles, highlighting the complex interplay between both factors in determining fungal community composition. Additionally, alpha diversity analyses showed significantly higher species richness in granite compared to sandstone, suggesting that structural heterogeneity and chasmoendolithism may promote a more diverse fungal assemblage. Full article
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22 pages, 1208 KiB  
Article
A Possible Involvement of Sialidase in the Cell Response of the Antarctic Fungus Penicillium griseofulvum P29 to Oxidative Stress
by Radoslav Abrashev, Ekaterina Krumova, Penka Petrova, Rumyana Eneva, Yana Gocheva, Stefan Engibarov, Jeny Miteva-Staleva, Vladislava Dishliyska, Galina Stoyancheva, Boryana Spasova, Vera Kolyovska and Maria Angelova
Life 2025, 15(6), 926; https://doi.org/10.3390/life15060926 - 8 Jun 2025
Viewed by 629
Abstract
Sialidases/neuraminidases remove terminal sialic acid residues from glycoproteins, glycolipids, and oligosaccharides. Our previous research has revealed the distribution of sialidase in non-clinical fungal isolates from different ecological niches, including Antarctica. Fungi adapted to extremely low temperatures possess defense mechanisms necessary for their survival [...] Read more.
Sialidases/neuraminidases remove terminal sialic acid residues from glycoproteins, glycolipids, and oligosaccharides. Our previous research has revealed the distribution of sialidase in non-clinical fungal isolates from different ecological niches, including Antarctica. Fungi adapted to extremely low temperatures possess defense mechanisms necessary for their survival such as the response against oxidative stress. The relationship between oxidative stress and sialidase synthesis has been studied extremely sparsely. The aim of the present study was to investigate the involvement of sialidase in the cell response of the Antarctic strain P. griseofulvum P29 against oxidative stress induced by long- and short-term exposure to low temperatures. The changes in growth temperatures for 120 h (long-term stress) affected biomass accumulation, glucose consumption, sialidase synthesis, and the activity of the antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT). The short-term temperature downshift (6 h) caused oxidative stress, evidenced by changes in the levels of biomarkers, including lipid peroxidation, oxidatively damaged proteins, and the accumulation of reserve carbohydrates. Simultaneously, a sharp increase in SOD and CAT activity was found, which coincided with a significant increase in sialidase activity. This study marks the first demonstration of increased sialidase activity in filamentous fungi isolated from extreme cold environments as a response to oxidative stress. Full article
(This article belongs to the Special Issue Sialic Acid and Sialic Acid Derivatives in Biomedicine)
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41 pages, 3877 KiB  
Review
Cell Response to Oxidative Stress in Antarctic Filamentous Fungi
by Radoslav Abrashev, Jeny Miteva-Staleva, Yana Gocheva, Galina Stoyancheva, Vladislava Dishliyska, Boryana Spasova, Ekaterina Krumova and Maria Angelova
Appl. Sci. 2025, 15(9), 5149; https://doi.org/10.3390/app15095149 - 6 May 2025
Cited by 2 | Viewed by 749
Abstract
Antarctica, with its harsh environmental conditions, is home to a wide variety of microorganisms, including filamentous fungi. The survival of Antarctic mycoflora has led to increasing interest in their adaptation. Extreme low temperatures, low water availability, frequent freeze–thaw cycles, strong winds, ultraviolet radiation, [...] Read more.
Antarctica, with its harsh environmental conditions, is home to a wide variety of microorganisms, including filamentous fungi. The survival of Antarctic mycoflora has led to increasing interest in their adaptation. Extreme low temperatures, low water availability, frequent freeze–thaw cycles, strong winds, ultraviolet radiation, etc., are all prerequisites for accelerated production of reactive oxygen species (ROS) and the occurrence of oxidative stress (OS). Antarctic fungi have effective mechanisms to cope with the damaging effects of ROS. While the distribution, morphology, physiology, and biotechnological potential of these fungi are well documented, the role of oxidative stress in their adaptation is poorly understood. This has been one of the main research topics of our team for a long time, and a number of papers on our results have been published. This review summarizes the existing literature on the induction of oxidative stress in Antarctic psychrophilic, psychrotolerant, and mesophilic fungi by extreme conditions. The most recent and relevant studies reporting on the relationship between cold stress and OS biomarkers and the damaging effects of ROS on key intracellular biomolecules are presented. The contribution of both enzymatic and non-enzymatic antioxidant defenses to the fungal cell response is discussed. Full article
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15 pages, 2579 KiB  
Article
Carbon Dioxide Fluxes Associated with Prokaryotic and Eukaryotic Communities in Ice-Free Areas on King George Island, Maritime Antarctica
by Luiz H. Rosa, Vívian N. Gonçalves, Débora Luiza Costa Barreto, Marcio Rocha Francelino, Clara Glória Oliveira Baldi, Danilo Cesar Mello, Kárita C. R. Santos, Fabyano A. C. Lopes, Micheline Carvalho-Silva, Peter Convey and Paulo E. A. S. Câmara
DNA 2025, 5(1), 15; https://doi.org/10.3390/dna5010015 - 10 Mar 2025
Viewed by 1268
Abstract
Background and Methods: We assessed the prokaryotic and eukaryotic diversity present in non-vegetated and vegetated soils on King George Island, Maritime Antarctic, in combination with measurements of carbon dioxide fluxes. Results: For prokaryotes, 381 amplicon sequence variants (ASVs) were assigned, dominated by the [...] Read more.
Background and Methods: We assessed the prokaryotic and eukaryotic diversity present in non-vegetated and vegetated soils on King George Island, Maritime Antarctic, in combination with measurements of carbon dioxide fluxes. Results: For prokaryotes, 381 amplicon sequence variants (ASVs) were assigned, dominated by the phyla Actinobacteriota, Acidobacteriota, Pseudomonadota, Chloroflexota, and Verrucomicrobiota. A total of 432 eukaryotic ASVs were assigned, including representatives from seven kingdoms and 21 phyla. Fungi dominated the eukaryotic communities, followed by Viridiplantae. Non-vegetated soils had higher diversity indices compared with vegetated soils. The dominant prokaryotic ASV in non-vegetated soils was Pyrinomonadaceae sp., while Pseudarthrobacter sp. dominated vegetated soils. Mortierella antarctica (Fungi) and Meyerella sp. (Viridiplantae) were dominant eukaryotic taxa in the non-vegetated soils, while Lachnum sp. (Fungi) and Polytrichaceae sp. (Viridiplantae) were dominant in the vegetated soils. Measured CO2 fluxes indicated that the net ecosystem exchange values measured in vegetated soils were lower than ecosystem respiration in non-vegetated soils. However, the total flux values indicated that the region displayed positive ecosystem respiration values, suggesting that the soils may represent a source of CO2 in the atmosphere. Conclusions: Our study revealed the presence of rich and complex communities of prokaryotic and eukaryotic organisms in both soil types. Although non-vegetated soils demonstrated the highest levels of diversity, they had lower CO2 fluxes than vegetated soils, likely reflecting the significant biomass of photosynthetically active plants (mainly dense moss carpets) and their resident organisms. The greater diversity detected in exposed soils may influence future changes in CO2 flux in the studied region, for which comparisons of non-vegetated and vegetated soils with different microbial diversities are needed. This reinforces the necessity for studies to monitor the impact of resident biota on CO2 flux in different areas of Maritime Antarctica, a region strongly impacted by climatic changes. Full article
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21 pages, 3918 KiB  
Article
Biodegradation of Polyhydroxybutyrate, Polylactide, and Their Blends by Microorganisms, Including Antarctic Species: Insights from Weight Loss, XRD, and Thermal Studies
by Volodymyr Skorokhoda, Ihor Semeniuk, Taras Peretyatko, Viktoria Kochubei, Oleksandr Ivanukh, Yuriy Melnyk and Yurij Stetsyshyn
Polymers 2025, 17(5), 675; https://doi.org/10.3390/polym17050675 - 2 Mar 2025
Cited by 1 | Viewed by 1503
Abstract
This study explores the biodegradation of polyhydroxybutyrate (PHB), polylactide (PLA), and their blends by 11 bacterial species (including Antarctic strains) and 6 fungal species. Aeration significantly enhanced PHB degradation by mold fungi (Aspergillus oryzae, Penicillium chrysogenum) and bacteria (Paenibacillus [...] Read more.
This study explores the biodegradation of polyhydroxybutyrate (PHB), polylactide (PLA), and their blends by 11 bacterial species (including Antarctic strains) and 6 fungal species. Aeration significantly enhanced PHB degradation by mold fungi (Aspergillus oryzae, Penicillium chrysogenum) and bacteria (Paenibacillus tundrae, Bacillus mycoides), while Aspergillus awamori was most effective under non-aerated conditions. For PLA, degradation peaked under aeration with Penicillium chrysogenum and Bacillus subtilis. PHB/PLA blends degraded slower overall, with maximum degradation under aeration by Penicillium chrysogenum, Pseudoarthrobacter sp., and Flavobacterium sp. Biodegradation was assessed via weight-loss measurements, X-ray diffraction (XRD), and thermal analysis. PHB samples showed reduced crystallinity and thermal stability linked to weight loss, while PLA samples exhibited varied changes, often with increased crystallinity and stability depending on the microorganism. PHB/PLA blends displayed variable crystallinity changes, generally decreasing under microbial action. The search for effective plastic-degrading microorganisms, particularly from extreme environments like Antarctica, is vital for addressing plastic pollution and advancing sustainable polymer degradation. Full article
(This article belongs to the Section Biobased and Biodegradable Polymers)
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22 pages, 1907 KiB  
Article
Lipid Production in Cultivable Filamentous Fungi Isolated from Antarctic Soils: A Comprehensive Study
by Victor Gallardo, Jéssica Costa, Marcela Sepúlveda, Yasna Cayún, Christian Santander, Excequel Ponce, Juliana Bittencourt, César Arriagada, Javiera Soto, Romina Pedreschi, Vania Aparecida Vicente, Pablo Cornejo and Cledir Santos
Microorganisms 2025, 13(3), 504; https://doi.org/10.3390/microorganisms13030504 - 25 Feb 2025
Viewed by 904
Abstract
Antarctic soil represents an important reservoir of filamentous fungi (FF) species with the ability to produce novel bioactive lipids. However, the lipid extraction method is still a bottleneck. The objective of the present work was to isolate and identify cultivable FF from Antarctic [...] Read more.
Antarctic soil represents an important reservoir of filamentous fungi (FF) species with the ability to produce novel bioactive lipids. However, the lipid extraction method is still a bottleneck. The objective of the present work was to isolate and identify cultivable FF from Antarctic soils, to assess the most effective methods for fatty acid (FA) extraction, and to characterise the obtained lipids. A total of 18 fungal strains belonging to the Botrytis, Cladosporium, Cylindrobasidium, Mortierella, Penicillium, Pseudogymnoascus, and Talaromyces genera and the Melanommataceae family were isolated and identified. The Folch, Bligh and Dyer, and Lewis extraction methods were assessed, and methyl esters of FA (FAMEs) were obtained. The Lewis method was the best in recovering FAMEs from fungal biomass. A total of 17 FAs were identified, and their chemical compositions varied depending on fungal species and strain. Oleic, linoleic, stearic, and palmitic acids were predominant for all fungal strains in the three assessed methods. Among the analysed strains, Cylindrobasidium eucalypti, Penicillium miczynskii, P. virgatum, and Pseudogymnoascus pannorum produced high amounts of FA. This suggests that the soils of Antarctica Bay, as well as harbouring known oleaginous fungi, are also an important source of oleaginous filamentous fungi that remain poorly analysed. Full article
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18 pages, 3308 KiB  
Article
Microbial Communities in Permafrost, Moraine and Deschampsia antarctica Rhizosphere Soils near Ecology Glacier (King George Island, Maritime Antarctic)
by Daniel E. Palma, Alexis Gaete, Dariel López, Andrés E. Marcoleta, Francisco P. Chávez, León A. Bravo, Jacquelinne J. Acuña, Verónica Cambiazo and Milko A. Jorquera
Diversity 2025, 17(2), 86; https://doi.org/10.3390/d17020086 - 25 Jan 2025
Viewed by 1464
Abstract
While the recession of glaciers in the Antarctic is of global concern under climate change, the impact of deglaciation on soil microbiomes is still limited. Here, soil samples were collected from permafrost (P), moraine (M) and Deschampsia antarctica rhizosphere (R) soils near Ecology [...] Read more.
While the recession of glaciers in the Antarctic is of global concern under climate change, the impact of deglaciation on soil microbiomes is still limited. Here, soil samples were collected from permafrost (P), moraine (M) and Deschampsia antarctica rhizosphere (R) soils near Ecology Glacier (Antarctic), and their soil physicochemical properties and microbial communities (bacteria, archaea and fungi) were characterized. Our analyses showed that there were significant differences in the soil properties and microbial communities between the R samples and the P and M samples. Specifically, amplicon sequencing of 16S rDNA revealed high bacterial richness and diversity in the studied soils, which were dominated mainly by the phyla Proteobacteria, Actinobacteriota and Bacteroidota. In contrast, lower richness and diversity were observed in the archaeal communities, which were dominated by the phyla Chenarchaeota (M and R) and Thermoplasmadota (M). In addition, fungal community analysis revealed a lower richness and diversity (M and R), dominated by the phylum Ascomycota. Our observations are consistent with previous reports describing the relevant changes in soil microbial communities during glacial recession, including fewer microbial groups studied in soils (archaea and fungi). However, further studies are still needed to elucidate the contributions of microbial communities to soil formation and plant colonization in ice-free soils in Antarctica under global climate change. Full article
(This article belongs to the Special Issue 2024 Feature Papers by Diversity’s Editorial Board Members)
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14 pages, 4892 KiB  
Article
Anti-Neuroinflammatory Effects of Prenylated Indole Alkaloids from the Antarctic Fungus Aspergillus sp. Strain SF-7367
by Zhiming Liu, Chi-Su Yoon, Thao Quyen Cao, Hwan Lee, Il-Chan Kim, Joung Han Yim, Jae Hak Sohn, Dong-Sung Lee and Hyuncheol Oh
Molecules 2025, 30(2), 294; https://doi.org/10.3390/molecules30020294 - 13 Jan 2025
Cited by 1 | Viewed by 1139
Abstract
Inflammation has always been considered a trigger or consequence of neurodegenerative diseases, and the inhibition of inflammation in the central nervous system can effectively protect nerve cells. Several studies have indicated that various natural products inhibit neuroinflammation. Among these, Antarctic fungal metabolites have [...] Read more.
Inflammation has always been considered a trigger or consequence of neurodegenerative diseases, and the inhibition of inflammation in the central nervous system can effectively protect nerve cells. Several studies have indicated that various natural products inhibit neuroinflammation. Among these, Antarctic fungal metabolites have pharmacological activities and a developmental value. Therefore, this study aimed to evaluate the anti-neuroinflammatory activity of an Antarctic fungus belonging to Aspergillus (strain SF-7367). Secondary metabolites of SF-7367 were isolated using high-performance liquid chromatography followed by validation of their anti-inflammatory effects in lipopolysaccharide-stimulated BV2 microglia and RAW264.7 macrophages. Chemical analysis of metabolites from the fungal strain revealed five known compounds: epideoxybrevianamide E (1), brevianamide V/W (2), brevianamide K (3), brevianamide Q (4), and brevianamide R (5). Among these compounds, brevianamide K showed significant anti-inflammatory activity against both cell types. Results of Western blotting and molecular docking showed that brevianamide K could regulate the activation of nuclear factor kappa-light-chain-enhancer of activated B cell (NF-κB) signaling. This indicates that brevianamide K present in Aspergillus sp. (strain SF-7367) can inhibit inflammatory responses by reducing lipopolysaccharide-induced nuclear translocation of NF-κB (p65). These findings suggest that Aspergillus sp. (strain SF-7367) and brevianamide K are candidate agents for treating neurodegenerative diseases. Full article
(This article belongs to the Special Issue Anti-Inflammatory Natural Compounds)
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19 pages, 3151 KiB  
Review
Germination Strategies and Seed Quality of Colobanthus quitensis: Implications for Sustainable Antarctic Ecosystems and Ex Situ Plant Conservation
by Yadiana Ontivero, Marely Cuba-Díaz, Eduardo Fuentes-Lillo and Peter Convey
Sustainability 2024, 16(23), 10726; https://doi.org/10.3390/su162310726 - 6 Dec 2024
Cited by 3 | Viewed by 1537
Abstract
The conservation of the Antarctic ecosystem is linked to scientific and tourism activities. The Colección Activa de Plantas Vasculares Antárticas at the Universidad de Concepción aims to help conserve the region’s vascular flora to support scientific research while minimizing anthropogenic pressure on natural [...] Read more.
The conservation of the Antarctic ecosystem is linked to scientific and tourism activities. The Colección Activa de Plantas Vasculares Antárticas at the Universidad de Concepción aims to help conserve the region’s vascular flora to support scientific research while minimizing anthropogenic pressure on natural ecosystems. Colobanthus quitensis is the only native dicotyledonous plant native to Antarctica and, as an extremophilic plant, is capable of withstanding extreme abiotic conditions. This species has potentially important use as a biological model to study the physiological deterioration of dormant seeds and other traits, some of which may contribute to vegetation development in Antarctica. Although studies have addressed the reproduction and germination of C. quitensis, there is no recent synthesis of information regarding its reproductive biology and seed traits that could support its conservation. This work synthesizes and critically analyzes the current knowledge of C. quitensis reproduction in natural and controlled environments, identifying factors that contribute to the decline in seed quality. We propose that growth conditions, seed morphology, and interactions with endophytic fungi influence germination and seedling establishment. We also highlight critical knowledge gaps that must be addressed to better understand the species’ phenology, the impact of biotic and abiotic factors on its development, strategies for seed conservation, and biotechnological applications. Full article
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19 pages, 3086 KiB  
Article
Native and Alien Antarctic Grasses as a Habitat for Fungi
by Sebastian Piłsyk, Urszula Perlińska-Lenart, Anna Janik, Patrycja Skalmowska, Anna Znój, Jan Gawor, Jakub Grzesiak and Joanna S. Kruszewska
Int. J. Mol. Sci. 2024, 25(15), 8475; https://doi.org/10.3390/ijms25158475 - 3 Aug 2024
Cited by 1 | Viewed by 1423
Abstract
Biological invasions are now seen as one of the main threats to the Antarctic ecosystem. An example of such an invasion is the recent colonization of the H. Arctowski Polish Antarctic Station area by the non-native grass Poa annua. This site was [...] Read more.
Biological invasions are now seen as one of the main threats to the Antarctic ecosystem. An example of such an invasion is the recent colonization of the H. Arctowski Polish Antarctic Station area by the non-native grass Poa annua. This site was previously occupied only by native plants like the Antarctic hair grass Deschampsia antarctica. To adapt successfully to new conditions, plants interact with soil microorganisms, including fungi. The aim of this study was to determine how the newly introduced grass P. annua established an interaction with fungi compared to resident grass D. antarctica. We found that fungal diversity in D. antarctica roots was significantly higher compared with P. annua roots. D. antarctica managed a biodiverse microbiome because of its ability to recruit fungal biocontrol agents from the soil, thus maintaining a beneficial nature of the endophyte community. P. annua relied on a set of specific fungal taxa, which likely modulated its cold response, increasing its competitiveness in Antarctic conditions. Cultivated endophytic fungi displayed strong chitinolysis, pointing towards their role as phytopathogenic fungi, nematode, and insect antagonists. This is the first study to compare the root mycobiomes of both grass species by direct culture-independent techniques as well as culture-based methods. Full article
(This article belongs to the Section Molecular Microbiology)
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22 pages, 17739 KiB  
Article
Endolithic Fungal Diversity in Antarctic Oligocene Rock Samples Explored Using DNA Metabarcoding
by Natana G. Rabelo, Vívian N. Gonçalves, Marcelo A. Carvalho, Sandro M. Scheffler, Gustavo Santiago, Paula A. Sucerquia, Fabio S. Oliveira, Larissa P. Campos, Fabyano A. C. Lopes, Karita C. R. Santos, Micheline C. Silva, Peter Convey, Paulo E. A. S. Câmara and Luiz H. Rosa
Biology 2024, 13(6), 414; https://doi.org/10.3390/biology13060414 - 5 Jun 2024
Cited by 3 | Viewed by 1863
Abstract
In this study, we evaluated the fungal diversity present associated with cores of Oligocene rocks using a DNA metabarcoding approach. We detected 940,969 DNA reads grouped into 198 amplicon sequence variants (ASVs) representing the phyla Ascomycota, Basidiomycota, Mortierellomycota, Chytridiomycota, [...] Read more.
In this study, we evaluated the fungal diversity present associated with cores of Oligocene rocks using a DNA metabarcoding approach. We detected 940,969 DNA reads grouped into 198 amplicon sequence variants (ASVs) representing the phyla Ascomycota, Basidiomycota, Mortierellomycota, Chytridiomycota, Mucoromycota, Rozellomycota, Blastocladiomycota, Monoblepharomycota, Zoopagomycota, Aphelidiomycota (Fungi) and the fungal-like Oomycota (Stramenopila), in rank abundance order. Pseudogymnoascus pannorum, Penicillium sp., Aspergillus sp., Cladosporium sp., Aspergillaceae sp. and Diaporthaceae sp. were assessed to be dominant taxa, with 22 fungal ASVs displaying intermediate abundance and 170 being minor components of the assigned fungal diversity. The data obtained displayed high diversity indices, while rarefaction indicated that the majority of the diversity was detected. However, the diversity indices varied between the cores analysed. The endolithic fungal community detected using a metabarcoding approach in the Oligocene rock samples examined contains a rich and complex mycobiome comprising taxa with different lifestyles, comparable with the diversity reported in recent studies of a range of Antarctic habitats. Due to the high fungal diversity detected, our results suggest the necessity of further research to develop strategies to isolate these fungi in culture for evolutionary, physiological, and biogeochemical studies, and to assess their potential role in biotechnological applications. Full article
(This article belongs to the Topic Extreme Environments: Microbial and Biochemical Diversity)
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15 pages, 2047 KiB  
Article
Glucose Catabolite Repression Participates in the Regulation of Sialidase Biosynthesis by Antarctic Strain Penicillium griseofulvum P29
by Radoslav Abrashev, Ekaterina Krumova, Penka Petrova, Rumyana Eneva, Vladislava Dishliyska, Yana Gocheva, Stefan Engibarov, Jeny Miteva-Staleva, Boryana Spasova, Vera Kolyovska and Maria Angelova
J. Fungi 2024, 10(4), 241; https://doi.org/10.3390/jof10040241 - 23 Mar 2024
Viewed by 1867
Abstract
Sialidases (neuraminidases) catalyze the removal of terminal sialic acid residues from glycoproteins. Novel enzymes from non-clinical isolates are of increasing interest regarding their application in the food and pharmaceutical industry. The present study aimed to evaluate the participation of carbon catabolite repression (CCR) [...] Read more.
Sialidases (neuraminidases) catalyze the removal of terminal sialic acid residues from glycoproteins. Novel enzymes from non-clinical isolates are of increasing interest regarding their application in the food and pharmaceutical industry. The present study aimed to evaluate the participation of carbon catabolite repression (CCR) in the regulation of cold-active sialidase biosynthesis by the psychrotolerant fungal strain Penicillium griseofulvum P29, isolated from Antarctica. The presence of glucose inhibited sialidase activity in growing and non-growing fungal mycelia in a dose- and time-dependent manner. The same response was demonstrated with maltose and sucrose. The replacement of glucose with glucose-6-phosphate also exerted CCR. The addition of cAMP resulted in the partial de-repression of sialidase synthesis. The CCR in the psychrotolerant strain P. griseofulvum P29 did not depend on temperature. Sialidase might be subject to glucose repression by both at 10 and 25 °C. The fluorescent assay using 4MU-Neu5Ac for enzyme activity determination under increasing glucose concentrations evidenced that CCR may have a regulatory role in sialidase production. The real-time RT-PCR experiments revealed that the sialidase gene was subject to glucose repression. To our knowledge, this is the first report that has studied the effect of CCR on cold-active sialidase, produced by an Antarctic strain. Full article
(This article belongs to the Special Issue Fungal Diversity and Ecology in Extreme Environments)
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16 pages, 2013 KiB  
Article
Expanding the Toolbox for Genetic Manipulation in Pseudogymnoascus: RNAi-Mediated Silencing and CRISPR/Cas9-Mediated Disruption of a Polyketide Synthase Gene Involved in Red Pigment Production in P. verrucosus
by Diego Palma, Vicente Oliva, Mariana Montanares, Carlos Gil-Durán, Dante Travisany, Renato Chávez and Inmaculada Vaca
J. Fungi 2024, 10(2), 157; https://doi.org/10.3390/jof10020157 - 16 Feb 2024
Cited by 2 | Viewed by 2675
Abstract
Fungi belonging to the genus Pseudogymnoascus have garnered increasing attention in recent years. One of the members of the genus, P. destructans, has been identified as the causal agent of a severe bat disease. Simultaneously, the knowledge of Pseudogymnoascus species has expanded, [...] Read more.
Fungi belonging to the genus Pseudogymnoascus have garnered increasing attention in recent years. One of the members of the genus, P. destructans, has been identified as the causal agent of a severe bat disease. Simultaneously, the knowledge of Pseudogymnoascus species has expanded, in parallel with the increased availability of genome sequences. Moreover, Pseudogymnoascus exhibits great potential as a producer of specialized metabolites, displaying a diverse array of biological activities. Despite these significant advancements, the genetic landscape of Pseudogymnoascus remains largely unexplored due to the scarcity of suitable molecular tools for genetic manipulation. In this study, we successfully implemented RNAi-mediated gene silencing and CRISPR/Cas9-mediated disruption in Pseudogymnoascus, using an Antarctic strain of Pseudogymnoascus verrucosus as a model. Both methods were applied to target azpA, a gene involved in red pigment biosynthesis. Silencing of the azpA gene to levels of 90% or higher eliminated red pigment production, resulting in transformants exhibiting a white phenotype. On the other hand, the CRISPR/Cas9 system led to a high percentage (73%) of transformants with a one-nucleotide insertion, thereby inactivating azpA and abolishing red pigment production, resulting in a white phenotype. The successful application of RNAi-mediated gene silencing and CRISPR/Cas9-mediated disruption represents a significant advancement in Pseudogymnoascus research, opening avenues for comprehensive functional genetic investigations within this underexplored fungal genus. Full article
(This article belongs to the Special Issue Recent Advances in Fungal Secondary Metabolism, 2nd Edition)
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16 pages, 4574 KiB  
Article
A Novel Extracellular Catalase Produced by the Antarctic Filamentous Fungus Penicillium Rubens III11-2
by Zdravka Koleva, Radoslav Abrashev, Maria Angelova, Galina Stoyancheva, Boryana Spassova, Lyudmila Yovchevska, Vladislava Dishliyska, Jeny Miteva-Staleva and Ekaterina Krumova
Fermentation 2024, 10(1), 58; https://doi.org/10.3390/fermentation10010058 - 15 Jan 2024
Cited by 3 | Viewed by 2598
Abstract
Catalase (CAT) is an enzyme involved in the first line of cellular antioxidant defense. It plays a key role in the protection of a wide range of Antarctic organisms against cold stress. Extracellular catalase is very rare and data on it are extremely [...] Read more.
Catalase (CAT) is an enzyme involved in the first line of cellular antioxidant defense. It plays a key role in the protection of a wide range of Antarctic organisms against cold stress. Extracellular catalase is very rare and data on it are extremely scarce. The aim of the present study was to select an efficient producer of extracellular catalase from amongst Antarctic filamentous fungi. Sixty-two Antarctic filamentous fungal strains were investigated for their potential ability to synthesize intracellular and extracellular CAT. The Antarctic strain Penicillium rubens III11-2 was selected as the best producer of extracellular catalase. New information on the involvement of the extracellular antioxidant enzymes superoxide dismutase and CAT in the response of filamentous fungi against low-temperature stress was obtained. An efficient scheme for the purification of CAT from culture fluid was developed. An enzyme preparation with high specific activity (513 U/mg protein) was obtained with a yield of 19.97% and a purification rate of 98.4-fold. The purified enzyme exhibited maximal enzymatic activity in the temperature range of 5–40 °C and temperature stability between 0 and 30 °C, therefore being characterized as temperature sensitive. To our knowledge, this is the first purified extracellular cold active catalase preparation from Antarctic filamentous fungi. Full article
(This article belongs to the Special Issue New Research on Strains Improvement and Microbial Biosynthesis)
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