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41 pages, 2121 KB  
Review
Polyphenol Composition, Antioxidant Properties, and Health Benefits of Moroccan-Cultivated Raspberries, Blackberries, and Blueberries: A Comprehensive Review
by Abderrahim Alahyane, Samira El Qarnifa, Abdoussadeq Ouamnina, Bouchra El Hayany, Imane El ateri, Abdelaziz Mounir, Hassan Alahyane, Mourad Ouhammou and Mohamed Abderrazik
Foods 2026, 15(8), 1356; https://doi.org/10.3390/foods15081356 - 13 Apr 2026
Viewed by 168
Abstract
Despite Morocco’s emergence as the world’s fourth-largest berry exporter, no comprehensive review has evaluated the polyphenol composition, antioxidant properties, and health benefits of raspberries (Rubus idaeus), blackberries (Rubus fruticosus), and blueberries (Vaccinium corymbosum) specifically within the Moroccan [...] Read more.
Despite Morocco’s emergence as the world’s fourth-largest berry exporter, no comprehensive review has evaluated the polyphenol composition, antioxidant properties, and health benefits of raspberries (Rubus idaeus), blackberries (Rubus fruticosus), and blueberries (Vaccinium corymbosum) specifically within the Moroccan cultivation context. This narrative review synthesized evidence from phytochemical analyses, in vitro and in vivo studies, randomized controlled trials (RCTs), meta-analyses, and epidemiological data sourced from PubMed, Scopus, and Web of Science. Blackberries exhibited the highest total polyphenol content (149 μmol GAE/L) and antioxidant capacity, driven primarily by anthocyanin concentration and diversity. Antioxidant mechanisms included free radical scavenging, transition metal chelation, and upregulation of endogenous antioxidant enzymes. Pooled RCT data demonstrated that regular consumption (150–300 g/day) significantly reduced systolic blood pressure (−2.72 mmHg), LDL cholesterol (−0.21 mmol/L), and fasting glucose (−2.70 mg/dL). Additional benefits included neuroprotection via blood-brain barrier crossing and brain-derived neurotrophic factor (BDNF) elevation, prebiotic modulation of Bifidobacterium, Lactobacillus, and Akkermansia populations, and anti-cancer activity via nuclear factor-kappa B (NF-κB) and mitogen-activated protein kinase (MAPK) inhibition. Processing significantly affected bioactive retention: freezing preserved phenolic compounds effectively, while conventional drying reduced anthocyanin content by up to 49%. These findings support the integration of Moroccan-cultivated berries—particularly from the Gharb, Loukkos, and Souss-Massa regions—into evidence-based dietary and functional food strategies. Priority research gaps include bioavailability assessment, dose-response characterization, and cultivar-specific phytochemical profiling under Moroccan agro-climatic conditions. Full article
14 pages, 1248 KB  
Article
Physiological and Biochemical Responses of Pearl Millet and Mustard to Cut-Soiler-Based Shallow Subsurface Drainage Under Saline Irrigation
by Gajender Yadav, Neha, Ashwani Kumar, Bhawna Babal, Arvind Kumar Rai, Junya Onishi, Keisuke Omori and Rajender Kumar Yadav
Agronomy 2026, 16(8), 779; https://doi.org/10.3390/agronomy16080779 - 10 Apr 2026
Viewed by 314
Abstract
Inadequate drainage and the application of salty irrigation waterinduced salinity stress, poses a major constraint to agricultural productivity, especially in saline–arid regions. Shallow subsurface drainage has emerged as a potential technique for salinity management; however, its implications for crop physiological and biochemical responses [...] Read more.
Inadequate drainage and the application of salty irrigation waterinduced salinity stress, poses a major constraint to agricultural productivity, especially in saline–arid regions. Shallow subsurface drainage has emerged as a potential technique for salinity management; however, its implications for crop physiological and biochemical responses remain unclear. Therefore, a two-year lysimetric study was undertaken in a split-split plot design investigating cut-soiler-based preferential shallow subsurface drainage (PSSD), soil type (saline sandy loam and normal silty clay loam), and irrigation water salinity levels (4, 8 and 12 dS m−1) to evaluate the effectiveness of rice-residue-filled cut-soiler PSSD in mitigating salinity stress in pearl millet and mustard crops. The cut-soiler PSSD reduced root-zone salinity to around 60.0% by the end of experimentation. Lower root-zone salinity under cut-soiler PSSD alleviated osmotic and ionic stress by reducing hydrogen peroxide (11.0–14.6%), membrane injury (22.7–40.8%), lipid peroxidation (20.0–25.0%), proline accumulation (26.0–37.0%) and improving the Na+/K+ ratio (44.0%). Antioxidant enzyme activities were also significantly moderated under the cut-soiler PSSD. These physiological and biochemical improvements resulted in significant increases in grain and seed yield of pearl millet (23.5%) and mustard (31.4%), respectively. The findings of this study indicate that cut-soiler PSSD is an effective strategy to mitigate salinity stress at the physiological and biochemical level and offers sustainable management strategies for salt-affected agro-ecosystems. Full article
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15 pages, 1688 KB  
Article
Dissection of the Genetic Basis of Maize Plant Architecture and Candidate Gene Mining Based on the MAGIC Population
by Xiaoming Xu, Kang Zhao, Yukang Zeng, Shaohang Lin, Nadeem Muhammad, Wenhui Gao, Jiaojiao Ren and Penghao Wu
Genes 2026, 17(4), 399; https://doi.org/10.3390/genes17040399 - 31 Mar 2026
Viewed by 325
Abstract
Background/Objectives: Plant architecture is a critical determinant of high-density tolerance and yield potential in maize (Zea mays L.), yet the genetic networks orchestrating these complex traits require deeper elucidation. Methods: In this study, we utilized a Multi-parent Advanced Generation Inter-cross (MAGIC) population [...] Read more.
Background/Objectives: Plant architecture is a critical determinant of high-density tolerance and yield potential in maize (Zea mays L.), yet the genetic networks orchestrating these complex traits require deeper elucidation. Methods: In this study, we utilized a Multi-parent Advanced Generation Inter-cross (MAGIC) population comprising 935 recombinant inbred lines (RILs) derived from 16 diverse elite founders. A comprehensive phenotypic characterization of six pivotal architectural traits—plant height (PH), ear height (EH), ear leaf length (LL), ear leaf width (LW), tassel main axis length (TL), and tassel branch number (TBN)—was conducted across three distinct agro-ecological environments. Results: Phenotypic analysis revealed substantial natural variation and high broad-sense heritability (H2 ranging from 60% to 86%), with TBN exhibiting the most pronounced variability. Correlation architecture demonstrated a strong coupling between vertical growth traits (PH and EH, r = 0.73), while lateral leaf expansion (LW) and tassel complexity (TBN) showed significant genetic independence. Using a mixed linear model (MLM) for genome-wide association studies (GWAS), we identified 21 significant SNP–trait associations, including distinct chromosomal clusters on chromosome 8 for EH and chromosome 7 for TBN. By integrating genomic intervals with tissue-specific expression profiling, 23 core candidate genes were prioritized. Notably, Zm00001d042528 (FAS1), involved in chromatin assembly, was implicated in modulating meristematic cell division for plant stature. Other key regulators included Zm00001d020537 (O5) and Zm00001d025360 (F-box protein), which were associated with reproductive organ development and leaf elongation, respectively. Conclusions: These results indicate that maize plant architecture is regulated by a modular genetic framework, with specific loci independently regulating canopy structure and source–sink components. It should be noted that the findings of this study are based solely on statistical models identifying significant associations between genetic loci and phenotypes; the biological regulatory functions of the candidate genes have not yet been experimentally validated. Nevertheless, this study provides new insights into the molecular mechanisms underlying maize morphogenesis and lays a solid theoretical foundation for molecular design breeding aimed at developing high-yielding varieties tolerant of high planting densities. Full article
(This article belongs to the Topic Recent Advances in Plant Genetics and Breeding)
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21 pages, 3359 KB  
Article
Analysis of Selected Biotransformation Processes Considering Enzyme Deactivation
by Justyna Miłek, Joanna Liszkowska and Marcin Wróblewski
Catalysts 2026, 16(3), 281; https://doi.org/10.3390/catal16030281 - 20 Mar 2026
Viewed by 592
Abstract
Agro-industrial waste impacts populations worldwide. Food waste, in turn, is a major source of complex lipids, carbohydrates, and other substances. Therefore, it is crucial to convert food waste into products that reduce environmental problems. Enzymatic hydrolysis has advantages over chemical hydrolysis. Examples include [...] Read more.
Agro-industrial waste impacts populations worldwide. Food waste, in turn, is a major source of complex lipids, carbohydrates, and other substances. Therefore, it is crucial to convert food waste into products that reduce environmental problems. Enzymatic hydrolysis has advantages over chemical hydrolysis. Examples include the enzymatic hydrolysis of starch by α-amylase and the hydrolysis of inulin by inulinase, which occur under milder environmental and temperature conditions than acid hydrolysis of starch or inulin. Despite these milder temperature conditions, during substate hydrolysis, enzyme deactivation occurs under exposure to temperature. As temperature increases above Topt (which maximizes catalytic activity), enzyme deactivation becomes more pronounced, leading to a decrease in enzyme activity. Therefore, determining the rate constant of deactivation kd, during biotransformation is an important aspect in understanding enzyme kinetics. Most experimental studies focus on changes in enzyme activity with time and temperature. However, enzyme deactivation also occurs during enzymatic reactions conducted at different temperatures, and this process is characterized by specific deactivation parameters. The study is to present the rate constants of deactivation kd, for selected biotransformation processes. The selected biotransformation processes are hydrolysis of olive oil by lipase, hydrolysis of inulin by inulinase, and hydrolysis of starch by α-amylase. Given the widespread use of enzymes in industry, the information on enzyme deactivation presented in this study can be used by engineers involved in modeling and optimizing enzymatic processes. This knowledge is also essential for the effective and sustainable use of enzymes in industrial applications. It is important to emphasize that the deactivation parameters discussed in this study also carry significant economic, social, and environmental implications. Full article
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22 pages, 2802 KB  
Article
Exploring the Potential of Post-Consumer Agroindustrial Subproducts for Nanocellulose-Biobased Adhesives
by Consuelo Fritz, Bastián Muñoz, Juan Francisco Olivera and Paulo Díaz-Calderón
Polysaccharides 2026, 7(1), 35; https://doi.org/10.3390/polysaccharides7010035 - 13 Mar 2026
Viewed by 535
Abstract
The valorization of agro-industrial byproducts as sources of functional polysaccharides is a promising strategy for developing sustainable materials. In this study, cellulose was extracted and purified from rice husk and apple pomace through sequential alkaline and bleaching treatments. Then it was chemically modified [...] Read more.
The valorization of agro-industrial byproducts as sources of functional polysaccharides is a promising strategy for developing sustainable materials. In this study, cellulose was extracted and purified from rice husk and apple pomace through sequential alkaline and bleaching treatments. Then it was chemically modified via TEMPO-mediated oxidation to obtain cellulose nanofibers (TOCNFs) with cellulose yields ranging from 23.8 to 32.4% for rice husk and 9.3–13.8% for apple pomace. Owing to its higher recovery and structural regularity, rice husk was selected for surface modification with 3-aminopropyltriethoxysilane (APTES). The resulting TOCNFs exhibited an average width of 8 nm and a carboxyl content of 0.48 mmol g−1. Fourier-transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), and nitrogen determination (1.72 mg g−1) confirmed the presence of aminosilane functionalities. APTES-modified TOCNFs were incorporated as active components to develop hybrid poly(vinyl acetate) (PVA) adhesives synthesized via in situ heterogeneous water-based polymerization. The influence of TOCNF surface chemistry and sodium dodecyl sulfate (SDS) on latex particle size, rheological behavior, and adhesive performance was systematically investigated. Latex particle size increased from 193 nm (PVA-SDS) to 625 nm with TOCNF-APTES and decreased to 247 nm upon SDS addition. Rheological analysis revealed pronounced shear-thinning behavior associated with the formation of percolated nanofibrillar networks, with low-shear viscosity increasing up to 477 Pa·s for TOCNF–APTES and decreasing to 370 Pa·s with SDS. Lap-shear testing (ASTM D905) showed substantial improvements in adhesive strength, reaching up to 250 kPa compared to PVA-SDS. These results demonstrate that surface-modified CNFs act not only as mechanical reinforcements but also as interfacially active components governing polymerization behavior, rheology, and adhesive performance. This exploratory study provides a proof-of-concept for the development of sustainable wood adhesives from agro-industrial byproducts. Full article
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18 pages, 4846 KB  
Article
Valorization of Sugarcane Bagasse Ash (SCBA) in Cementitious Composites: Hydration Behavior, Nanomodification and Sustainability Performance
by Javier Rodrigo Nahuat-Sansores, Karla del Carmen García-Uitz, Julio César Cruz-Argüello, Carlos Andrés Ramírez-Pinto, Ricardo Enrique Vega-Azamar, Danna Lizeth Trejo-Arroyo and Yazmin Vidal Valdez
Recycling 2026, 11(3), 54; https://doi.org/10.3390/recycling11030054 - 5 Mar 2026
Viewed by 495
Abstract
Sugarcane bagasse ash (SCBA) has been widely studied as a partial supplementary cementitious material; nonetheless, its hydration behavior and performance when combined with nanoscale modifiers remain insufficiently understood. The aim of this study is to assess the pozzolanic potential of SCBA, the hydration [...] Read more.
Sugarcane bagasse ash (SCBA) has been widely studied as a partial supplementary cementitious material; nonetheless, its hydration behavior and performance when combined with nanoscale modifiers remain insufficiently understood. The aim of this study is to assess the pozzolanic potential of SCBA, the hydration behavior of binary SCBA–cement composites and the mechanical performance of ternary mortars with silica nanoparticles (Si-NPs). SCBA reactivity was confirmed by a Chapelle index of ~300 mg Ca(OH)2/g, while hydration development in binary pastes (5–20 wt% SCBA) was quantified using TG/dTG and semi-quantitative XRD. Low SCBA replacement levels (5–10 wt%) enhanced the hydration degree by up to ~12% at 28 days compared with the reference paste. Ternary mortars incorporating 5 wt% SCBA and Si-NPs exhibited significant strength gains, with the optimal blend (2.5 wt% Si-NPs) achieving a 42% increase in 28-day compressive strength relative to the reference mortar. A sustainability assessment showed concurrent reductions in clinker intensity and CO2 intensity of approximately 33% and 32%, respectively. These findings support the sustainable and technical viability of combining agro-industrial waste and nanotechnology as complementary strategies for reducing clinker content while enhancing eco-efficiency in alternative cementitious composites. Full article
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26 pages, 11288 KB  
Article
Genomic Characterization of Pseudomonas syringae pv. syringae Populations Affecting Sweet Cherry Orchards in Chile Reveals Local Adaptation and Virulence Signatures
by Francisco Correa, Paz Millas, Rubén Almada, Franco Figueroa, Juan Pablo Martinez and Boris Sagredo
Plants 2026, 15(4), 552; https://doi.org/10.3390/plants15040552 - 10 Feb 2026
Viewed by 740
Abstract
Pseudomonas syringae pv. syringae (Pss) is an economically significant bacterial pathogen that causes canker in sweet cherry trees. In Chile, sweet cherry (Prunus avium L.) is a key crop whose exponential production growth has increased phytosanitary pressure. However, the genetic [...] Read more.
Pseudomonas syringae pv. syringae (Pss) is an economically significant bacterial pathogen that causes canker in sweet cherry trees. In Chile, sweet cherry (Prunus avium L.) is a key crop whose exponential production growth has increased phytosanitary pressure. However, the genetic diversity and adaptive mechanisms of local Pss populations have remained poorly understood. This study characterized 41 Pss isolates from major Chilean production regions. Their genomes were sequenced and compared with 152 public genomes from the PG2 phylogenetic group. The analysis revealed a predominance of the PG2d subgroup among the Chilean isolates, with a population structure defined by at least 18 genomic clusters, some of which are exclusive to Chile. A characteristic feature of this entire PG2d subgroup is the presence of indole-3-acetic acid (IAA) synthesis genes (iaaM and iaaH). Furthermore, this subgroup displayed a marked increase in ancestral gene gain and loss events, indicating extensive remodeling of the shell genome and supporting a model of lineage-specific adaptive evolution. We also identified lineage-specific orthogroups, structural variants of the T-PAI pathogenicity island, and a differential distribution of Hop-type effector proteins. Furthermore, an extended copper resistance operon (cop and cus systems) was detected in a subset of strains, and a dominant lineage was found to have a dual i1-type of T6SS system. These findings highlight the local diversification of Pss in Chile, likely driven by agro-environmental pressures. This study provides crucial insights into the evolution, adaptation, and pathogenic potential of this important pathogen in a crop of high strategic value. Full article
(This article belongs to the Special Issue Occurrence and Control of Plant Bacterial Diseases)
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16 pages, 1841 KB  
Article
Enhancing Soil Functionality Through Circular Fertilizers Derived from Agro-Industrial Wastes: Insights into Microbiological and Biochemical Dynamics
by Angela Maffia, Federica Alessia Marra, Santo Battaglia, Carmelo Mallamaci and Adele Muscolo
Environments 2026, 13(2), 93; https://doi.org/10.3390/environments13020093 - 9 Feb 2026
Viewed by 630
Abstract
The growing demand for sustainable fertilization practices has stimulated interest in circular fertilizers derived from agro-industrial and agricultural wastes. This study assessed the agronomic and biological performance of several waste-based fertilizers—produced through composting, vermicomposting, and sulfur–bentonite enrichment—on chemical and microbiological soil properties. Composts [...] Read more.
The growing demand for sustainable fertilization practices has stimulated interest in circular fertilizers derived from agro-industrial and agricultural wastes. This study assessed the agronomic and biological performance of several waste-based fertilizers—produced through composting, vermicomposting, and sulfur–bentonite enrichment—on chemical and microbiological soil properties. Composts and vermicomposts were prepared from olive pomace, citrus residues, wood sawdust, and straw, with or without elemental sulfur obtained from petroleum gas desulfurization. Field trials were conducted on a sandy loam soil (Motta San Giovanni, Italy) to compare the different formulations. After six months, soils amended with waste-based fertilizers exhibited significant improvements in key parameters relative to both the control and mineral fertilizer treatment. Vermicompost applications (SV1, SV2) increased total organic carbon by 20–30% (up to 2.1%), total nitrogen by 35–45% (0.22–0.23%), microbial biomass carbon by ~25% (≈1090 µg C g−1), and dehydrogenase and fluorescein diacetate activities by 10–20% compared with compost or sulfur–bentonite treatments. Compost amendments (SC1, SC2) raised soil pH (8.2–8.3) and organic matter content (≈3.3–3.6%), while sulfur–bentonite formulations lowered pH to 7.1–7.3 and increased water-soluble phenols (up to 40 µg TAE g−1 d.s). The highest cation exchange capacity (22–23 cmol (+) kg−1) was observed in vermicompost-amended soils. Microbial community analysis revealed greater fungal abundance under sulfur–bentonite treatments, whereas bacteria and actinomycetes predominated in compost-amended soils. Principal Component Analysis (explaining 76% of variance) identified two main functional pathways: vermicompost treatments clustered with indicators of high biological activity (TOC, TN, MBC, and enzyme activities), while compost and sulfur–bentonite treatments were associated with pH, phenolic compounds, and fungal biomass, reflecting slower but more stable organic matter turnover. Overall, vermicompost-based fertilizers proved most effective in enhancing short-term nutrient availability and microbial activation, whereas composts favored long-term soil carbon accumulation and stability. These results highlight the potential of circular fertilizers derived from agro-industrial wastes to restore soil health, close nutrient cycles, and reduce dependence on synthetic fertilizers—thereby advancing sustainable and circular agriculture. Full article
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15 pages, 437 KB  
Article
Growing Nutrition on Waste: Exploring Pleurotus columbinus as a Sustainable Functional Food
by Marianna Dedousi, Chrysavgi Gardeli, Milena Pantić, Gordana Krstić, Vladimir Dobričić, Seraphim Papanikolaou and Panagiota Diamantopoulou
Appl. Sci. 2026, 16(3), 1548; https://doi.org/10.3390/app16031548 - 3 Feb 2026
Viewed by 359
Abstract
The present study investigated the cultivation of Pleurotus columbinus on alternative substrates derived from spent mushroom substrate combined with spent coffee grounds or wheat straw, with or without supplementation with wheat bran and soybean flour, in comparison to conventional wheat straw. All substrates [...] Read more.
The present study investigated the cultivation of Pleurotus columbinus on alternative substrates derived from spent mushroom substrate combined with spent coffee grounds or wheat straw, with or without supplementation with wheat bran and soybean flour, in comparison to conventional wheat straw. All substrates were evaluated for their effects on the nutritional composition, amino acid profile, lipid, carbohydrate contents and bioactive compounds of the harvested carposomes. Protein content ranged from 15.6 to 21.4% w/w. Methionine was identified as the first limiting amino acid and the essential amino acid index was up to 60.9%. Carbohydrate content exceeded 63.3% w/w in all samples, with glucose identified as the major monosaccharide. Lipid content was low (1.7–3.4% w/w), with polyunsaturated fatty acids predominating. Ash content ranged from 5.7 to 6.3% w/w and the energy value varied between 36.2 and 37.1 kcal/100 g f.w. Bioactive compounds, including β-glucans (35.9–44.4% w/w) and ergosterol (3.3–4.7 mg/g d.w.), along with their metabolites, were successfully quantified. Non-supplemented substrates enhanced β-glucan levels; most of them were further isolated, whereas lovastatin was not detected in any sample. Overall, P. columbinus cultivated on alternative substrates exhibited improved nutritional quality and higher bioactive compound content compared to conventional cultivation, demonstrating the potential of agro-industrial by-products as sustainable substrates for high-value mushroom production. Full article
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10 pages, 827 KB  
Article
Valorization of Agro-Industrial Waste of Cajanus cajan Shell, Plantain Peels (Musa spp.) and Zea mays Cob Husk on Rumen Degradation Kinetics and Mitigation of Greenhouse Gases Production in Ruminants
by Jorge Quintana-Zamora, Verónica Andrade-Yucailla, Rocio Yagual-De La Cruz, Katherine Contreras-Barros, Marcos Barros-Rodríguez, Carlos Guishca-Cunuhay, Jorge Iraola and Andrés Pech-Cervantes
Ruminants 2026, 6(1), 11; https://doi.org/10.3390/ruminants6010011 - 2 Feb 2026
Viewed by 513
Abstract
The aim of this research was to evaluate the effect of agro-industrial waste from C. cajan shell, plantain peels (Musa spp.), and Zea mays cob husk on in situ ruminal degradation kinetics and in vitro gas production. Rumen degradation of DM in [...] Read more.
The aim of this research was to evaluate the effect of agro-industrial waste from C. cajan shell, plantain peels (Musa spp.), and Zea mays cob husk on in situ ruminal degradation kinetics and in vitro gas production. Rumen degradation of DM in the soluble fraction (A) was higher (p = 0.0001) in plantain peel (37.5%). The insoluble but potentially degradable fraction (B) was higher (p = 0.0001) in C. Cajan shell (71.7%). Regarding the degradation rate in percentage per hour (c: 0.13%/h), degradation potential (A + B: 86.3%) and effective degradation at the different passage rates (k) (0.02: 79.6%, 0.05: 72.4%, and 0.08: 67.3% k, respectively), it was higher (p < 0.05) in the plantain peels. Rumen NDF degradation was higher (p < 0.05) in plantain peels for all degradation parameters (A + B: 80.8, k: 0.02: 57.1%, 0.05: 44.9%, and 0.08: 37.6%, respectively). Total gas production kinetics (D; 333.3 mLgas/0.5 g degraded DM) and gas production at 24, 48, and 96 h were lower (p = 0.0001) in plantain peels. CH4 production was low (p = 0.0001) in plantain peels at all evaluated times (24 h: 32.7, 48 h: 37.9, and 96 h: 53.5 mL/0.5 g degraded DM). CO2 production was lower (p < 0.05) in C. Cajan and plantain peels at all evaluated times. Under the conditions of this study, it can be concluded that the use of plantain peels (Musa spp.) can be beneficial to animals when incorporated into the diet, as it contains a similar protein content to tropical forages, as well as low fiber content, high ruminal degradation, and secondary compounds that benefit energy maximization by mitigating enteric gas production in ruminants. Full article
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18 pages, 4528 KB  
Review
Response of Root Arbuscular Mycorrhizal Fungi Colonization Rate to Biochar, Compost, and Manure: A Global Meta-Analysis
by Haidong Wang, Zheng Yang, Minghui Cheng, Qiliang Yang and Huanhao Han
Agronomy 2026, 16(2), 263; https://doi.org/10.3390/agronomy16020263 - 22 Jan 2026
Cited by 1 | Viewed by 703
Abstract
Arbuscular mycorrhizal fungi (AMF) form symbiotic interactions with most terrestrial plants, enhancing nutrient uptake and stress resilience. Organic amendments like biochar, compost, and manure are advocated to improve soil health and promote AMF symbiosis. However, empirical evidence of their effects on root AMF [...] Read more.
Arbuscular mycorrhizal fungi (AMF) form symbiotic interactions with most terrestrial plants, enhancing nutrient uptake and stress resilience. Organic amendments like biochar, compost, and manure are advocated to improve soil health and promote AMF symbiosis. However, empirical evidence of their effects on root AMF colonization is inconsistent, and a systematic understanding of the governing factors is lacking. Here, we synthesized the responses of root AMF colonization in agricultural systems to biochar, compost, and manure input from 85 studies (663 pairs of observations) globally based on a meta-analysis. Overall, biochar and compost/manure significantly increased root AMF colonization. However, these effects were highly context-dependent. Biochar most strongly promoted colonization in coarse-textured soils with low total potassium (TK ≤ 25 g kg−1) and high total carbon (TC ≥ 11 g kg−1), particularly for fruit and tuber crops. In contrast, compost/manure were most effective in fine-textured soils with high TK (≥25 g kg−1) and low bulk density (BD ≤ 1.3 g cm−3). Notably, compost/manure suppressed colonization in neutral pH (6.5 < pH < 7.5) and high BD soils (>1.3 g cm−3). Key amendment properties drove these responses: biochar with low electrical conductivity (EC < 5 dS m−1), high sodium and low macronutrient content was most beneficial, whereas compost/manure with high total nitrogen (TN > 9 g kg−1) and low organic carbon (OC ≤ 500 g kg−1) performed best. The efficacy of organic amendments in enhancing AMF symbiosis is not universal but dictated by a complex interplay of soil properties and amendment characteristics. Our findings provide a robust, quantitative framework for tailoring amendment strategies to specific agro-ecological contexts, enabling farmers and land managers to selectively use biochar or compost/manure to harness AMF benefits for sustainable crop production. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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19 pages, 3689 KB  
Article
The Use of Monoclonal Antibodies of IgG and IgM Classes to Monitor β-D-Glucan Production from Basidiomycete Mushroom Strains in Agro-Industrial Wastes
by Amin Karmali
Processes 2026, 14(2), 300; https://doi.org/10.3390/pr14020300 - 15 Jan 2026
Viewed by 383
Abstract
A huge amount of waste is produced annually by the food processing industry which must be valorized into high-value products. Therefore, the aim of this work involves the use of such wastes for production of β-glucans from medicinal basidiomycete strains which are [...] Read more.
A huge amount of waste is produced annually by the food processing industry which must be valorized into high-value products. Therefore, the aim of this work involves the use of such wastes for production of β-glucans from medicinal basidiomycete strains which are powerful biological response modifiers in several clinical disorders. The production of β-glucans from basidiomycete strains in submerged fermentation was monitored by using monoclonal antibodies of the IgG and IgM classes as well as by Congo red assay in the presence of several agro-industrial waste products such as milk permeate, waste coffee grounds, orange peels and rice husks. Subsequently, these β-glucans were purified by using gel filtration and ion-exchange chromatography. FTIR analysis of several β-glucans was carried out to investigate their structural properties. The adsorption of β-glucans on microtiter plates was dependent on the temperature as well as on the time period of immobilization for ELISA. These mAbs can be used in a competitive ELISA for detection and quantification of β-glucans from basidiomycete mushrooms. Full article
(This article belongs to the Section Biological Processes and Systems)
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16 pages, 449 KB  
Article
Diet-Driven Modulation of Antibiotic Resistance Genes and Microbial Risk During the Bioconversion of Agro-Industrial Residues by Hermetia illucens
by Vesna Milanović, Andrea Marcelli, Alessio Ilari, Giorgia Rampanti, Kofi Armah Boakye-Yiadom, Federica Cardinali, Andrea Osimani, Cristiana Garofalo, Ester Foppa Pedretti and Lucia Aquilanti
Sci 2026, 8(1), 11; https://doi.org/10.3390/sci8010011 - 8 Jan 2026
Viewed by 496
Abstract
Background: Hermetia illucens larvae provide a sustainable bioconversion pathway that transforms agro-industrial residues into protein- and nutrient-dense biomass and frass, suitable for animal feed and soil amendment, respectively. Nevertheless, the potential spread of antibiotic resistance (AR) genes and pathogenic microorganisms poses biosafety [...] Read more.
Background: Hermetia illucens larvae provide a sustainable bioconversion pathway that transforms agro-industrial residues into protein- and nutrient-dense biomass and frass, suitable for animal feed and soil amendment, respectively. Nevertheless, the potential spread of antibiotic resistance (AR) genes and pathogenic microorganisms poses biosafety concerns. This study examined the impact of four residue-based diet formulations; peas and chickpea (D1), peas and wheat (D2), onion and wheat (D3), and wheat with digestate (D4), on microbial safety during the bioconversion process. Methods: Enterococcus spp. (viable counts), Salmonella spp. (presence/absence), and 13 AR genes associated with resistance to tetracyclines, macrolide-lincosamide-streptogramin B, β-lactams, vancomycin, and aminoglycosides were quantified in single substrates, diets, larvae, and frass using qPCR. Results: Principal component analysis revealed diet-driven AR gene profiles. D1 lowered the levels of the greatest number of tested AR genes, particularly erm(B), tetracycline, and β-lactam genes in frass, as well as tet(O) and vanB in mature larvae. In contrast, D2 increased the AR gene levels in frass. All diets except D4 eliminated Salmonella spp. Enterococcus spp. loads varied by diet and larval stage, with D2 reducing counts in frass. Conclusions: Diet composition directly shapes microbial dynamics and AR gene dissemination, indicating that legume-based substrates may enhance biosafety in bioconversion systems. Full article
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10 pages, 1994 KB  
Proceeding Paper
A Leptolyngbya-Dominated Consortium for the Optimized Biological Treatment of Mixed Agro-Industrial Effluents
by Vasiliki Patrinou, Dimitris V. Vayenas and Athanasia G. Tekerlekopoulou
Eng. Proc. 2025, 117(1), 17; https://doi.org/10.3390/engproc2025117017 - 7 Jan 2026
Viewed by 489
Abstract
Many individual wastewater streams exhibit imbalanced or poor nutrient profiles, limiting their suitability for efficient biological treatment. In regions where several agro-industrial activities coexist, these streams are often produced in small volumes and vary considerably in composition, making their combined use an effective [...] Read more.
Many individual wastewater streams exhibit imbalanced or poor nutrient profiles, limiting their suitability for efficient biological treatment. In regions where several agro-industrial activities coexist, these streams are often produced in small volumes and vary considerably in composition, making their combined use an effective way to obtain a more balanced influent. This study aimed to identify the optimal mixing ratio of two agro-industrial wastewaters, second cheese whey (SCW) and poultry wastewater (PW), for the cultivation of a Leptolyngbya-dominated consortium. Four mixing ratios of SCW:PW (50:50%, 60:40%, 70:30%, and 85:15%) were examined based on an initial dissolved chemical oxygen demand (d-COD) concentration of 3000 mg L−1. The 70:30% ratio was led to significant biomass production (268.3 mg L−1 d−1), while simultaneously exhibiting the highest lipid content (14.0% d.w.), and the highest removal of d-COD (89.2%), total nitrogen (64%) and PO43−-P (60%). Overall, the experiments showed that using nutritionally balanced wastewater streams is a promising strategy to enhance biological treatment efficiency and lipid production. Full article
(This article belongs to the Proceedings of The 4th International Electronic Conference on Processes)
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Article
Techno-Economic Assessment of Hydrogen and CO2 Recovery from Broccoli Waste via Dark Fermentation and Biorefinery Modeling
by Carlos Eduardo Molina-Guerrero, Idania Valdez-Vazquez, Arquímedes Cruz López, José de Jesús Ibarra-Sánchez and Luis Carlos Barrientos Álvarez
Processes 2025, 13(12), 4083; https://doi.org/10.3390/pr13124083 - 18 Dec 2025
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Abstract
Broccoli waste (Brassica oleracea), comprising non-commercialized stems and leaves, represents a valuable substrate for bioenergy and commodity recovery within agro-industrial systems. This study evaluates the potential of dark fermentation (DF) to produce hydrogen (H2) and carbon dioxide (CO2 [...] Read more.
Broccoli waste (Brassica oleracea), comprising non-commercialized stems and leaves, represents a valuable substrate for bioenergy and commodity recovery within agro-industrial systems. This study evaluates the potential of dark fermentation (DF) to produce hydrogen (H2) and carbon dioxide (CO2) from unpretreated broccoli residues. Batch experiments (120 mL) yielded maximum gas production rates of up to 166 mL/L·d, with final compositions of 41.43 mol% and 58.56 mol% of H2 and CO2, respectively. Based on these results, two biorefinery models were simulated using COCO v3.10 and SuperPro Designer® v12.0, incorporating absorption and cryogenic separation technologies in the purification stage. Two scenarios were considered: Option A (169.82 kmol/day; H2: 0.5856 mol fraction, CO2: 0.4143 mol fraction) and Option B (72.84 kmol/day; H2: 0.6808 mol fraction, CO2: 0.3092 mol fraction). In both configurations, the purities of the final streams were the same, being 99.8% and 99.8% for both H2 and CO2, respectively. However, energy consumption was 43.76% higher in the cryogenic H2/CO2 separation system than in the absorption system. Noteworthily, this difference does not depend on the stream’s composition. Furthermore, from a financial standpoint, the cryogenic system is more expensive than the absorption system. These findings confirm the feasibility of designing biorefineries for H2 production with high CO2 recovery from broccoli waste. However, the economic viability of the process depends on the valorization of the secondary effluent from the fermentation reactor, which may require subsequent anaerobic digestion stages to complete the degradation of residual organic matter and enhance overall resource recovery. Full article
(This article belongs to the Special Issue Advances in Biomass Conversion and Biorefinery Applications)
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