One Health Perspectives on Pathogenic Amoebae: Infections and Environmental Detection

A special issue of Tropical Medicine and Infectious Disease (ISSN 2414-6366). This special issue belongs to the section "One Health".

Deadline for manuscript submissions: 14 August 2026 | Viewed by 1510

Special Issue Editors


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Guest Editor
Instituto Tecnológico de Sonora, Ciudad Obregon, Mexico
Interests: free-living amoeba; genomics; bioinformatics; Balamuthia mandrillaris; Acanthamoeba spp.; genotypes; transcriptomics; molecular biology

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Guest Editor
Departamet of Agronomic Sciences and Veterinary, Instituto Tecnológico de Sonora, Ciudad Obregón 85000, Sonora, Mexico
Interests: parasitology; microbiology; free-living amoeba; clinical parasitology; Naegleria fowleri; Balamuthia mandrillaris; Acanthamoeba spp.
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Special Issue Information

Dear Colleagues,

Pathogenic, free-living amoebae such as Acanthamoeba spp., Naegleria fowleri, Balamuthia mandrillaris, and Vermamoeba vermiformis, as well as other emerging taxa, deserve renewed attention within the One Health framework, where human, animal, and environmental health overlap. Infections are uncommon, yet when these organisms invade the central nervous system, the eyes, the skin, or other organs, outcomes can be severe, including high mortality, slow or missed diagnoses, and few reliably effective treatments. Their persistent presence in soil, dust, natural and recreational waters, engineered and household water systems, biofilms and built environments highlights their status as overlooked environmental threats that call for coordinated, evidence-driven surveillance and control.

This Special Issue, “One Health Perspectives on Pathogenic Amoebae: Infections and Environmental Detection”, invites original research, reviews, short communications and case reports that bridge clinical, veterinary, environmental and public health viewpoints. We are particularly interested in studies on epidemiology, clinical presentation, host–pathogen and host–microbiome interactions, and quantitative risk assessment across recreational, domestic, industrial and agricultural settings.

Contributions that utilize molecular typing and omics approaches, including genomics, transcriptomics, proteomics, metabolomics, and metagenomics, together with advanced bioinformatics, are encouraged for species identification, virulence and resistance profiling, outbreak investigation, and population-structure or evolutionary analyses. Submissions describing innovative diagnostic workflows, point-of-care assays, practical environmental monitoring tools, surveillance strategies and evaluations of disinfection or water-treatment interventions will be especially welcome.

We also seek opportunities in research on amoeba-associated microorganisms, polymicrobial interactions, and co-infections, as well as studies on drug discovery, repurposing, anti-amoebic screening platforms, and experimental in vitro or in vivo models. By gathering diverse perspectives from different regions and health systems, this Special Issue aims to build a stronger evidence base for earlier detection, prevention and better management of pathogenic amoebae, and to support research that informs practical policies and reduces the global impact of these underrecognized infections.

Dr. Libia Zulema Rodriguez Anaya
Dr. Fernando Lares-Villa
Guest Editors

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Keywords

  • free-living amoeba
  • omics
  • comparative genomics
  • One Health
  • drug discovery
  • transcriptomics
  • metabolomics
  • molecular characterization

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Published Papers (1 paper)

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Research

15 pages, 2032 KB  
Article
Genetic Classification of a Novel Genotype of the Genus Acanthamoeba Isolated from Tap Water in Mexico
by Paloma Camacho-Aguilar, Leobardo Daniel Gonzalez-Zuñiga, Jose Reyes Gonzalez-Galaviz, Fernando Lares-Villa, Luis Fernando Lares-Jiménez, Luis Fernando Lozano Aguirre Beltrán, Alejandro Otero-Ruiz and Libia Zulema Rodriguez-Anaya
Trop. Med. Infect. Dis. 2026, 11(4), 93; https://doi.org/10.3390/tropicalmed11040093 - 1 Apr 2026
Viewed by 1169
Abstract
Acanthamoeba is a free-living amoeba (FLA) that causes the majority of human infections. It is found predominantly in aquatic environments and is classified according to morphology or genotype (T1-T23). Research on this FLA aims to monitor its distribution, identify existing genotypes, assess its [...] Read more.
Acanthamoeba is a free-living amoeba (FLA) that causes the majority of human infections. It is found predominantly in aquatic environments and is classified according to morphology or genotype (T1-T23). Research on this FLA aims to monitor its distribution, identify existing genotypes, assess its infectious potential, and identify factors that contribute to its recurrence. This study performed a molecular characterisation of Acanthamoeba strains isolated from tap water in Cajeme, Sonora, Mexico, to classify their genotypes. This was complemented by whole-genome sequencing and mapping of the 18S rRNA region in a divergent strain, LUDO1, to obtain higher-resolution data for more reliable assessment of its divergence from known genotypes. Genotypes T4, T5, T11, and T15 were identified in the Acanthamoeba-specific amplimer S1 (ASA.S1) region using the maximum-likelihood method. The inclusion of the 18S rRNA region from strain LUDO1 enabled its classification as a new genotype (T24), with a dissimilarity exceeding 5% compared with the 23 known genotypes. Additionally, culture analysis revealed notable variation in trophozoite size among strains that correlated with phylogenetic sub-branching. This analysis contributed to the epidemiological understanding of Acanthamoeba’s high resistance to treatments and infection systems and demonstrated a broadening of the phylogenetic distribution within the genus. Full article
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