15th Anniversary of Genes: Feature Papers in the “Plant Genetics and Genomics” Section

A special issue of Genes (ISSN 2073-4425). This special issue belongs to the section "Plant Genetics and Genomics".

Deadline for manuscript submissions: 31 December 2025 | Viewed by 309

Special Issue Editors


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Guest Editor
School of Biological Sciences, The University of Western Australia, Crawley, WA 6009, Australia
Interests: crop genomics; brassica; disease resistance; pan genomics; evolutionary genomics; population genomics
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Guest Editor
Department of Agricultural Sciences, University of Bologna, Viale Fanin 44, 40127 Bologna, Italy
Interests: crop genomics; quantitative trait loci cloning; maize; durum wheat; barley; tilling; wheat pangenome: drought resistance; disease resistance; root system architecture
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Special Issue Information

Dear Colleagues,

This Special Issue, “15th Anniversary of Genes: Feature Papers in the “Plant Genetics and Genomics” Section”, will gather high-quality research articles, reviews, and communications on advances in research in plant genetics and genomics, celebrating the 15th anniversary of Genes and the 10th anniversary of the journal receiving its first impact factor. As our aim for this Special Issue is to illustrate, through selected works, frontier research in the field of plant genetics and genomics, we encourage Editorial Board Members for the “Plant Genetics and Genomics” Section to contribute feature papers reflecting the latest progress in their research field or to invite relevant senior experts and colleagues to contribute to this Special Issue. We aim to showcase our Section as an attractive open access publishing platform for plant genetics research.

Possible topics include, but are not limited to, the following:

  • Mechanisms of plant gene regulation;
  • Phylogenomics and evolutionary plant genetics;
  • Gene silencing and miRNAs;
  • QTL mapping and cloning;
  • Chromatin organization;
  • Epigenetics and epigenomics;
  • Plastid genomic studies;
  • Genetic engineering for crop production;
  • Pangenomes.

Prof. Dr. Jacqueline Batley
Prof. Dr. Roberto Tuberosa
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Genes is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2600 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • epigenetic editing
  • genetics
  • genomics
  • pangenome
  • plants
  • QTL mapping
  • QTL cloning
  • regulation of gene expression
  • transcriptome

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Published Papers (1 paper)

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Research

13 pages, 1907 KiB  
Article
Comprehensive Assembly and Comparative Analysis of Chloroplast Genome and Mitogenome of Prunus salicina var. cordata
by Ruyu Liao, Mengshi Zhao, Qin Lan, Song Peng, Fengqiang Lin and Zhaolong Li
Genes 2025, 16(6), 660; https://doi.org/10.3390/genes16060660 - 29 May 2025
Viewed by 216
Abstract
Background: Prunus plants are widely distributed across Asia and Europe, yet their intricate phylogenetic relationships pose significant challenges for systematic studies and interspecies identification. Objectives: To clarify the mitochondrial and chloroplast genomes of Prunus salicina var. cordata, and to reveal [...] Read more.
Background: Prunus plants are widely distributed across Asia and Europe, yet their intricate phylogenetic relationships pose significant challenges for systematic studies and interspecies identification. Objectives: To clarify the mitochondrial and chloroplast genomes of Prunus salicina var. cordata, and to reveal its evolutionary relationship and historical gene flow with domesticated cherries. Methods: In this study, we assembled, annotated, and analyzed the first mitochondrial and chloroplast genomes of P. salicina var. cordata, a species within the Prunus genus. Results: The mitochondrial genome was found to be 484,858 base pairs in length, exhibiting a typical circular conformation. Phylogenetic analysis revealed a close evolutionary relationship between P. domestica and P. salicina, suggesting historical gene flow between these two species last genomes; mitochondrial genomes; phylogeny analysis. Conclusions: To provide a genomic basis for resolving the phylogenetic controversies within the Li-associated plants, elucidating their evolutionary mechanisms, and formulating breeding strategies. Full article
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