Structural Insights into the Redox Potential of Curcumin Derivatives in Litopenaeus vannamei
Abstract
1. Introduction
2. Results
2.1. Bioactivity in CUR Derivatives
2.2. Correlation Between EA vs. pKi
2.3. Comparative Analysis Between GSH (Co-Crystallized) and CUR (Comparative Control)
2.4. NMA-Based Dynamic
2.5. Ecotoxicological Analysis
3. Discussion
3.1. Inhibition Potential vs. Selectivity
3.2. Behavior of Biochemical Interactions via LvGSTmu
3.3. Molecular Dynamics (NMA-Mode)
3.4. Exposure Acute and ChV Analysis
4. Materials and Methods
4.1. Curcumin Derivatives Analyzed
4.2. PASS Online Predictions of Biological Activity
4.3. Ecotoxicological Analysis
BCFBAF Analysis
4.4. Statistical Analysis
4.5. Molecular Docking Simulations
4.5.1. Ligand Preparation and Optimization
4.5.2. Obtaining and Preparation of Protein Structures
4.5.3. General Docking Procedures
4.6. NMA-Model Molecular Dynamics
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| WSSV | White Spot Syndrome Virus |
| QSAR | Quantitative Structure–Activity Relationship |
| MMFF94 | Merck Molecular Force Field 94 |
| LvGSTmu | Glutathione S-Transferase from shrimp L. vannamei |
| PDB | Protein Data Bank |
| NOS | Nitric oxide scavenger |
| ROS | Reactive oxygen species |
| GST | Glutathione S-Transferase |
| GSH | Glutathione (co-crystallized) |
| CUR | Curcumin |
| NMA | Normal Mode Analysis |
| EA | Affinity energy |
| RMSD | Root Mean Square Deviation |
| ChV | Chronic Toxicity |
| BCF | Bioconcentration factors |
| DM | Daphnia magna |
| BAF | Bioaccumulation factors |
| logKow | Octanol-water partition coefficient |
| nP | non-persistent |
| P | Persistent |
| vP | Very persistent |
| NOEC | No observed effect concentrations |
| LOEC | Lowest observed effect concentrations |
| LC50 | Lethal concentration |
| EC50 | Effective concentration |
| NMA | Multilevel Neighborhoods of Atoms |
| PASS | Prediction of Activity Spectra for Substances |
| pKi | Negative logarithm of the inhibition constant |
Appendix A
| Compd | Inter. Type | Residues/Distances (Å) |
|---|---|---|
| CURH | Hydrophobic | Y7 (4.70), A12 (4.71), L13 (4.76), K43 (4.12), L60 (3.77), F112 (4.77), F112 (3.38), F112 (3.53), Y116 (3.58), Y116 (4.03), Y116 (3.54), Y116 (3.67), E117 (3.93) |
| H-bond | Y7 (3.46), W8 (4.06), W46 (1.92), K50 (3.08), L60 (3.96), T113 (3.04), N208 (3.46) | |
| π-Stacking | W8 (5.43) | |
| CUROH | Hydrophobic | Y7 (4.64), A12 (4.47), L13 (4.93), L13 (3.93), L60 (3.53), F112 (3.90), F112 (4.17), F112 (3.44), Y116 (3.60), Y116 (4.12), Y210 (4.63) |
| H-bond | Y7 (2.32), W8 (3.59), K43 (1.82), W46 (2.54), T113 (3.56), T113 (3.68), E117 (3.82), E117 (3.17), Y210 (3.44) | |
| π-Stacking | W8 (4.93), Y116 (3.87) | |
| CURBr | Hydrophobic | Y7 (4.94), W8 (4.19), W46 (4.61), L60 (3.36), F112 (3.67), F112 (3.62), Ty116 (4.39), Ty116 (3.70), Ty116 (4.13), Ty116 (3.61) |
| H-bond | Y7 (2.42), W46 (2.35), K50 (2.36), T113 (2.00) | |
| CURCl | Hydrophobic | Y7 (4.20), W8 (3.94), L13 (4.49), W46 (4.77), L60 (3.67), F112 (4.97), F112 (4.54), F112 (3.96), F112 (3.45), Y116 (3.73), Y116 (3.70), Y210 (4.88) |
| H-bond | Y7 (1.82), W8 (3.41), L13 (3.80), W46 (2.47), K50 (2.44), L60 (3.95), E117 (3.58), E117 (2.81), E117 (4.32), N208 (3.75) | |
| π-Stacking | Y116 (3.99) | |
| CURF | Hydrophobic | Y7 (4.39), W8 (4.92), L13 (4.87), L60 (3.82), F112 (4.85), F112 (4.62), F112 (3.65), Y116 (3.63), Y116 (3.65), Y116 (3.74), Y116 (3.93), E117 (4.80) |
| H-bond | Y7 (1.97), W8 (3.90), W46 (1.99), K50 (2.96), E117 (3.87), E117 (2.23), N208 (3.83) | |
| π-Stacking | W8 (5.35) | |
| Halogen bond | T113 (3.66) |
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| Activity | CUR | CURH | CURCH | CUROH | CURBr | CURCl | CURF | CURNO |
|---|---|---|---|---|---|---|---|---|
| Reductant | 0.86 ± 0.003 | 0.91 ± 0.003 | 0.95 ± 0.002 | 0.92 ± 0.003 | 0.62 ± 0.010 | 0.62 ± 0.010 | 0.62 ± 0.010 | 0.92 ± 0.003 |
| Antimutagenic | 0.81 ± 0.004 | 0.79 ± 0.004 | 0.76 ± 0.002 | 0.81 ± 0.004 | 0.42 ± 0.020 | 0.52 ± 0.014 | 0.46 ± 0.017 | 0.37 ± 0.027 |
| GST substrate | 0.18 ± 0.087 | 0.80 ± 0.003 | 0.80 ± 0.002 | 0.83 ± 0.001 | 0.93 ± 0.002 | 0.85 ± 0.003 | 0.74 ± 0.004 | 0.78 ± 0.004 |
| GST M substrate | 0.77 ± 0.003 | 0.80 ± 0.002 | 0.60 ± 0.005 | 0.82 ± 0.002 | 0.57 ± 0.007 | 0.65 ± 0.004 | 0.75 ± 0.003 | 0.80 ± 0.002 |
| GST A substrate | 0.78 ± 0.004 | 0.88 ± 0.004 | 0.80 ± 0.009 | 0.82 ± 0.005 | 0.87 ± 0.004 | 0.87 ± 0.004 | 0.77 ± 0.012 | 0.90 ± 0.003 |
| GST P substrate | 0.18 ± 0.096 | 0.84 ± 0.004 | 0.81 ± 0.002 | 0.84 ± 0.001 | 0.81 ± 0.002 | 0.81 ± 0.002 | 0.82 ± 0.002 | 0.83 ± 0.001 |
| Free radical scavenger | 0.76 ± 0.003 | 0.67 ± 0.004 | 0.68 ± 0.004 | 0.71 ± 0.004 | 0.46 ± 0.013 | 0.50 ± 0.010 | 0.44 ± 0.014 | 0.62 ± 0.005 |
| Chemopreventive | 0.69 ± 0.007 | 0.65 ± 0.004 | 0.61 ± 0.004 | 0.66 ± 0.004 | 0.32 ± 0.034 | 0.37 ± 0.026 | 0.36 ± 0.027 | 0.37 ± 0.025 |
| Oxygen scavenger | 0.65 ± 0.013 | 0.68 ± 0.008 | 0.68 ± 0.008 | 0.66 ± 0.011 | 0.54 ± 0.039 | 0.53 ± 0.039 | 0.441 ± 0.014 | 0.46 ± 0.064 |
| Antioxidant | 0.61 ± 0.004 | 0.63 ± 0.004 | 0.61 ± 0.004 | 0.74 ± 0.004 | 0.44 ± 0.009 | 0.47 ± 0.008 | 0.45 ± 0.009 | 0.49 ± 0.007 |
| NOS * | 0.27 ± 0.011 | 0.30 ± 0.006 | 0.26 ± 0.015 | 0.29 ± 0.009 | 0.21 ± 0.040 | 0.21 ± 0.040 | 0.21 ± 0.040 | 0.24 ± 0.021 |
| Peroxidase inhibitor | 0.55 ± 0.032 | 0.60 ± 0.025 | 0.26 ± 0.073 | 0.74 ± 0.003 | 0.46 ± 0.013 | 0.61 ± 0.005 | 0.16 ± 0.113 | 0.41 ± 0.015 |
| Complex | Energy (kcal/moL) | Ki (M) | pKi | RMSD (Å) |
|---|---|---|---|---|
| GSH/LvGSTMu | −5.4 | 1.09 × 10−4 | 3.96 | 1.960 |
| CUR */LvGSTMu | −7.2 | 5.24 × 10−6 | 5.28 | 0.789 |
| CURH/LvGSTMu | −7.3 | 4.43 × 10−6 | 5.35 | 1.391 |
| CURCH/LvGSTMu | −7.8 | 1.90 × 10−6 | 5.72 | 1.745 |
| CUROH/LvGSTMu | −7.7 | 2.25 × 10−6 | 5.65 | 1.155 |
| CURBr/LvGSTMu | −7.6 | 2.67 × 10−6 | 5.57 | 1.662 |
| CURCl/LvGSTMu | −7.7 | 2.25 × 10−6 | 5.65 | 1.733 |
| CURF/LvGSTMu | −7.6 | 2.67 × 10−6 | 5.57 | 1.924 |
| CURNO/LvGSTMu | −8.5 | 5.83 × 10−7 | 6.23 | 1.081 |
| Compd | Inter. Type | Residues Distances (Å) |
|---|---|---|
| GSH | H-bond | Y7 (3.82), W8 (1.15), K43 (4.00), W46 (2.19), L60 (4.23), Q72 (3.38), Q72 (2.15), S73 (1.73), K74 (3.61) |
| Salt bridge | K50 (3.83), K74 (3.61) | |
| CUR | Hydrophobic | Y7 (4.27), Y7 (4.50), W8 (4.22), L13 (4.67), W46A (4.79), L60 (3.55), F112 (4.95), F112 (4.81), F112 (3.74), Y116 (3.63), Y116 (3.93), Y210 (4.84) |
| H-bond | Y7 (2.13), W8 (3.25), W46 (2.20), K50 (3.77), L60 (4.29), T113A (3.29), E117 (3.83), E117 (2.64), N208 (3.55) | |
| π-Stacking | Y116A (4.20) |
| Compd | Inter. Type | Residues Distances (Å) |
|---|---|---|
| GSH | H-bond | Y7 (3.82), W8 (1.15), K43 (4.00), W46 (2.19), L60 (4.23), Q72 (3.38), Q72 (2.15), S73 (1.73), K74 (3.61) |
| Salt bridge | K50 (3.83), K74 (3.61) | |
| CURNO | Hydrophobic | Tyr7 (4.73), Leu13 (3.77), Leu13 (4.08), Phe112 (3.48), Phe112 (3.49), Tyr116 (4.38), Tyr116 (3.61), Tyr116 (3.70), Tyr116 (4.30) |
| H-bond | Tyr7 (1.77), Trp8 (3.21), Leu13 (4.06), Asn59 (2.48), Gln72 (2.84), Asp106 (3.10), Thr113 (2.02) |
| Classification | Acute Toxicity | ChV * Toxicity |
|---|---|---|
| Not harmful | LC50/EC50 > 100 | ChV > 100 |
| Harmful | 10 < LC50/EC50 < 100 | 1 < ChV < 10 |
| Toxic | 1 < LC50/EC50 < 10 | 0.1 < ChV < 1 |
| Very toxic | LC50/EC50 < 1 | ChV < 0.1 |
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de Sousa, D.S.; Melo Lima, J.M.L.d.; Salmito-Vanderley, C.S.B.; Marinho, E.S. Structural Insights into the Redox Potential of Curcumin Derivatives in Litopenaeus vannamei. Drugs Drug Candidates 2026, 5, 24. https://doi.org/10.3390/ddc5020024
de Sousa DS, Melo Lima JMLd, Salmito-Vanderley CSB, Marinho ES. Structural Insights into the Redox Potential of Curcumin Derivatives in Litopenaeus vannamei. Drugs and Drug Candidates. 2026; 5(2):24. https://doi.org/10.3390/ddc5020024
Chicago/Turabian Stylede Sousa, Damião Sampaio, João Miguel Lopes de Melo Lima, Carminda Sandra Brito Salmito-Vanderley, and Emmanuel Silva Marinho. 2026. "Structural Insights into the Redox Potential of Curcumin Derivatives in Litopenaeus vannamei" Drugs and Drug Candidates 5, no. 2: 24. https://doi.org/10.3390/ddc5020024
APA Stylede Sousa, D. S., Melo Lima, J. M. L. d., Salmito-Vanderley, C. S. B., & Marinho, E. S. (2026). Structural Insights into the Redox Potential of Curcumin Derivatives in Litopenaeus vannamei. Drugs and Drug Candidates, 5(2), 24. https://doi.org/10.3390/ddc5020024

