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Keywords = zebra finches (Taeniopygia guttata)

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6 pages, 2629 KiB  
Case Report
Mycobacterium avium Subspecies Hominissuis-Induced Fatal Vasculitis in Zebra Finches (Taeniopygia guttata), USA
by Kelly Chenoweth, Carey Laster, Subarna Barua and Chengming Wang
Int. J. Mol. Sci. 2025, 26(15), 7555; https://doi.org/10.3390/ijms26157555 - 5 Aug 2025
Viewed by 18
Abstract
Mycobacterium avium subsp. hominissuis (MAH) is a zoonotic pathogen with a broad host range and diverse clinical manifestations. We report here the first documented case of MAH-induced fatal vasculitis in zebra finch (Taeniopygia guttata). Histopathological examination revealed acid-fast bacilli within macrophages [...] Read more.
Mycobacterium avium subsp. hominissuis (MAH) is a zoonotic pathogen with a broad host range and diverse clinical manifestations. We report here the first documented case of MAH-induced fatal vasculitis in zebra finch (Taeniopygia guttata). Histopathological examination revealed acid-fast bacilli within macrophages and endothelial cells, primarily affecting the heart and aorta. Mycobacterial DNA was detected in cloacal swabs from affected finches and environmental samples from their housing facility. PCR targeting the rpoB gene and insertion elements IS1245 and IS901, followed by sequencing, confirmed MAH infection. MAH DNA was identified in 4 of 13 finch cloacal swabs and 7 of 28 environmental samples. This study describes a novel, highly pathogenic manifestation of MAH in birds and underscores the potential for avian involvement in environmental and zoonotic transmission. Full article
(This article belongs to the Special Issue Molecular Research in Infective Mycobacteria)
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11 pages, 481 KiB  
Article
Prenatal Valproic Acid Exposure Affects Song Learning in Zebra Finches: A Potential Model for Vocal Development in Autism
by Estifanos Ghebrihiwet Tewelde, Boglárka Morvai, Gergely Zachar and Ákos Pogány
Life 2025, 15(7), 1058; https://doi.org/10.3390/life15071058 - 1 Jul 2025
Viewed by 376
Abstract
Autism spectrum disorder (ASD) encompasses a range of neurodevelopmental conditions characterized by impairments in social abilities and communication. Studying appropriate animal models can enhance our understanding of the neural mechanisms underlying these conditions, potentially leading to improved treatment and intervention strategies. Modeling impairments [...] Read more.
Autism spectrum disorder (ASD) encompasses a range of neurodevelopmental conditions characterized by impairments in social abilities and communication. Studying appropriate animal models can enhance our understanding of the neural mechanisms underlying these conditions, potentially leading to improved treatment and intervention strategies. Modeling impairments in linguistic development and vocal communication caused by autism had been a challenging goal for a long time. Prenatal valproic acid (VPA) treatment has been successfully used to induce ASD-like behavioral symptoms in several vertebrate species including birds. Applying VPA-treatment on songbirds, therefore, offers a promising research paradigm to model ASD. In this study, we investigated the effect of embryonic VPA treatment on song learning in the highly social zebra finch (Taeniopygia guttata). Fertilized eggs were injected with either 0.45 µmol VPA or a saline solution on day 9 of incubation, and hatchlings were allowed to stay with their parents until day 35 post-hatching to facilitate song learning from the father. Once male offsprings reached adulthood, their songs were recorded and compared to those of their fathers. VPA-exposed males exhibited significantly greater similarity to their fathers’ songs compared to control males (74% vs. 31%, respectively), suggesting a reduced ability to modify and develop their own vocal patterns as subadults. Additionally, they showed higher entropy in their songs compared to controls (−1.4 vs. −1.7), indicating more disorganized vocalizations. These findings suggest that prenatal VPA exposure disrupts typical song learning and vocal development in zebra finches, likely by affecting neural mechanisms involved in vocal learning and crystallization of the songs. Our study suggests VPA treatment in songbirds provides a useful tool to model and investigate linguistic developmental disorders related to ASD in humans. Full article
(This article belongs to the Section Animal Science)
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10 pages, 721 KiB  
Article
Zebra Finch Females Avoided the Scent of Males with Greater Body Condition
by Luisa Amo and Isabel López-Rull
Birds 2024, 5(1), 127-136; https://doi.org/10.3390/birds5010009 - 6 Feb 2024
Cited by 3 | Viewed by 2100
Abstract
The role of chemical communication in the social relationships of birds is receiving growing attention, but our knowledge is still scarce compared to that of other taxa. Previous evidence suggests that chemical cues emitted by birds may carry information about their characteristics, which [...] Read more.
The role of chemical communication in the social relationships of birds is receiving growing attention, but our knowledge is still scarce compared to that of other taxa. Previous evidence suggests that chemical cues emitted by birds may carry information about their characteristics, which may be useful in the context of sexual selection. However, experimental studies are needed to investigate the role of bird chemical cues in signalling the quality of potential partners. We performed an experimental study aimed at disentangling whether the female Zebra Finches (Taeniopygia guttata), use chemical cues to assess the body condition of potential partners. We offered focal females (N = 28) the scent of two males differing in body condition (body mass/tarsus length ratio) (N = 28 scent donor males). Our results showed that females can assess the body condition of potential partners using olfaction. However, contrary to what should be expected in a mate choice context, females avoided the scent of males with greater body condition. Our results, therefore, suggest that, despite performing the study during the breeding period, social interactions may be mediating the avoidance of the scent of the male in better condition in this gregarious species, probably to avoid a conspecific competitor with better body condition. Full article
(This article belongs to the Special Issue Feature Papers of Birds 2022–2023)
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9 pages, 1242 KiB  
Communication
Highly Conserved Microchromosomal Organization in Passeriformes Birds Revealed via BAC-FISH Analysis
by Marcelo Santos de Souza, Suziane Alves Barcellos, Victoria Tura, Vera Lúcia Bobrowski, Analía Del Valle Garnero, Ricardo José Gunski, Darren K. Griffin and Rafael Kretschmer
Birds 2023, 4(2), 236-244; https://doi.org/10.3390/birds4020020 - 16 Jun 2023
Cited by 2 | Viewed by 2140
Abstract
Passeriformes birds are widely recognized for their remarkable diversity, with over 5700 species described so far. Like most bird species, they possess a karyotype characteristic of modern birds, which includes a bimodal karyotype consisting of a few pairs of macrochromosomes and many pairs [...] Read more.
Passeriformes birds are widely recognized for their remarkable diversity, with over 5700 species described so far. Like most bird species, they possess a karyotype characteristic of modern birds, which includes a bimodal karyotype consisting of a few pairs of macrochromosomes and many pairs of microchromosomes. Although the karyotype is typically 2n = 80, the diploid number can atypically vary greatly, ranging from 56 to approximately 100 chromosomes. In this study, we aimed to understand the extent of conservation of the karyotype’s organizational structure within four species of this group using Bacterial Artificial Chromosomes via Fluorescence In Situ Hybridization (BAC-FISH) with microchromosome probes from Chicken (Gallus gallus) or Zebra Finch (Taeniopygia guttata) per microchromosomes (GGA10-28, except GGA16). By examining the chromosome complement of four passerine species—the Streaked Flycatcher (Myiodynastes maculatus), Shiny Cowbird (Molothrus bonariensis), Southern House Wren (Troglodytes aedon), and Double-collared Seedeater (Sporophila caerulescens)—we discovered a new chromosome number for Southern House Wren. Through FISH experiments, we were able to observe the same pattern of microchromosome organization as in the common ancestor of birds. As a result, we propose a new diploid number for Southern House Wren and confirm the conservation status of microchromosome organization, which may confer evolutionary advantages to this group. Full article
(This article belongs to the Special Issue Feature Papers of Birds 2022–2023)
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12 pages, 982 KiB  
Article
Relative Water Economy Is a Useful Index of Aridity Tolerance for Australian Poephiline Finches
by Philip C. Withers, Christine E. Cooper and Alexander N. Larcombe
Birds 2022, 3(2), 172-183; https://doi.org/10.3390/birds3020012 - 31 Mar 2022
Cited by 1 | Viewed by 3658
Abstract
We evaluate if the iconic Australian Zebra Finch (Taeniopygia guttata) has a unique physiology or if its metabolic, thermal and hygric physiology are similar to other Australian poephiline finches, by comparing it with three other species, the arid-habitat Painted Finch ( [...] Read more.
We evaluate if the iconic Australian Zebra Finch (Taeniopygia guttata) has a unique physiology or if its metabolic, thermal and hygric physiology are similar to other Australian poephiline finches, by comparing it with three other species, the arid-habitat Painted Finch (Emblema pictum) and the mesic-habitat Double-barred (Taeniopygia bichenovii) and Red-browed (Neochmia temporalis) Finches. All physiological variables responded to ambient temperature as expected. There were no species differences for any of the standard physiological variables, consistent with the hypotheses that birds are pre-adapted to arid habitats, the recent development of Australian deserts has limited opportunity for physiological adaptation, and all four species share similar behavioural and ecological traits. Nevertheless, the ambient temperature where metabolic water production equals evaporative water loss (point of relative water economy) was highest for the Zebra (19.1 °C), lower for Double-barred (16.4 °C) and Painted (15.2 °C) and lowest for Red-Browed (4.1 °C) Finches, corresponding with their general patterns of habitat aridity. The point of relative water economy may be a sensitive index for assessing a species’ tolerance of aridity because it integrates individual physiological variables. We conclude that the Zebra Finch is not a physiological outlier amongst Australian finches, but is at the end of a continuum of aridity tolerance for the four study species. Full article
(This article belongs to the Special Issue Feature Papers of Birds 2021)
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21 pages, 2687 KiB  
Article
Transcriptomics of Parental Care in the Hypothalamic–Septal Region of Female Zebra Finch Brain
by Rashmi Kumari, Emese A. Fazekas, Boglárka Morvai, Edina B. Udvari, Fanni Dóra, Gergely Zachar, Tamás Székely, Ákos Pogány and Árpád Dobolyi
Int. J. Mol. Sci. 2022, 23(5), 2518; https://doi.org/10.3390/ijms23052518 - 24 Feb 2022
Cited by 4 | Viewed by 3232
Abstract
(1) Background: The objective of this study was to uncover genomic causes of parental care. Since birds do not lactate and, therefore, do not show the gene expressional changes required for lactation, we investigate gene expression associated with parenting in caring and non-caring [...] Read more.
(1) Background: The objective of this study was to uncover genomic causes of parental care. Since birds do not lactate and, therefore, do not show the gene expressional changes required for lactation, we investigate gene expression associated with parenting in caring and non-caring females in an avian species, the small passerine bird zebra finch (Taeniopygia guttata). Here, we compare expression patterns in the hypothalamic–septal region since, previously, we showed that this area is activated in parenting females. (2) Methods: Transcriptome sequencing was first applied in a dissected part of the zebra finch brain related to taking care of the nestlings as compared to a control group of social pairs without nestlings. (3) Results: We found genes differentially expressed between caring and non-caring females. When introducing a log2fold change threshold of 1.5, 13 annotated genes were significantly upregulated in breeding pairs, while 39 annotated genes were downregulated. Significant enrichments of dopamine and acetylcholine biosynthetic processes were identified among upregulated pathways, while pro-opiomelanocortin and thyroid hormone pathways were downregulated, suggesting the importance of these systems in parental care. Network analysis further suggested neuro-immunological changes in mothers. (4) Conclusions: The results confirm the roles of several hypothesized major pathways in parental care, whereas novel pathways are also proposed. Full article
(This article belongs to the Section Molecular Neurobiology)
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17 pages, 7278 KiB  
Article
Evidence That Artificial Light at Night Induces Structure-Specific Changes in Brain Plasticity in a Diurnal Bird
by Stan Moaraf, Rachel Heiblum, Monika Okuliarová, Abraham Hefetz, Inon Scharf, Michal Zeman and Anat Barnea
Biomolecules 2021, 11(8), 1069; https://doi.org/10.3390/biom11081069 - 21 Jul 2021
Cited by 14 | Viewed by 3182
Abstract
We recently reported that artificial light at night (ALAN), at ecologically relevant intensities (1.5, 5 lux), increases cell proliferation in the ventricular zone and recruitment of new neurons in several forebrain regions of female zebra finches (Taeniopygia guttata), along with a [...] Read more.
We recently reported that artificial light at night (ALAN), at ecologically relevant intensities (1.5, 5 lux), increases cell proliferation in the ventricular zone and recruitment of new neurons in several forebrain regions of female zebra finches (Taeniopygia guttata), along with a decrease of total neuronal densities in some of these regions (indicating possible neuronal death). In the present study, we exposed male zebra finches to the same ALAN intensities, treated them with 5′-bromo-2′-deoxyuridine, quantified cell proliferation and neuronal recruitment in several forebrain regions, and compared them to controls that were kept under dark nights. ALAN increased cell proliferation in the ventricular zone, similar to our previous findings in females. We also found, for the first time, that ALAN increased new neuronal recruitment in HVC and Area X, which are part of the song system in the brain and are male-specific. In other brain regions, such as the medial striatum, nidopallium caudale, and hippocampus, we recorded an increased neuronal recruitment only in the medial striatum (unlike our previous findings in females), and relative to the controls this increase was less prominent than in females. Moreover, the effect of ALAN duration on total neuronal densities in the studied regions varied between the sexes, supporting the suggestion that males are more resilient to ALAN than females. Suppression of nocturnal melatonin levels after ALAN exhibited a light intensity-dependent decrease in males in contrast to females, another indication that males might be less affected by ALAN. Taken together, our study emphasizes the importance of studying both sexes when considering ALAN effects on brain plasticity. Full article
(This article belongs to the Special Issue Therapeutic Aspects of Circadian Rhythms)
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18 pages, 1771 KiB  
Article
Composition and Potential Function of Fecal Bacterial Microbiota from Six Bird Species
by Jose F. Garcia-Mazcorro, Cecilia Alanis-Lopez, Alicia G. Marroquin-Cardona and Jorge R. Kawas
Birds 2021, 2(1), 42-59; https://doi.org/10.3390/birds2010003 - 13 Jan 2021
Cited by 6 | Viewed by 5989
Abstract
Gut microbial communities play a fundamental role in health and disease, but little is known about the gut microbiota of pet bird species. This is important to better understand the impact of microbes on birds’ health but may also be relevant in a [...] Read more.
Gut microbial communities play a fundamental role in health and disease, but little is known about the gut microbiota of pet bird species. This is important to better understand the impact of microbes on birds’ health but may also be relevant in a context of zoonoses. Total genomic DNA samples from pooled fecal samples from 30 flocks (4–7 pet birds per flock) representing over 150 birds of six different species (two Passeriformes: Northern Mockingbird (Mimus polyglottos) and Zebra Finch (Taeniopygia guttata), and four Psittaciformes: Lovebird (Agapornis, different species), Cockatiel (Nymphicus hollandicus), Red-rumped Parrot (Psephotus haematonotus), and Rose-ringed Parakeet (Psittacula krameri) were used for 16S rRNA gene analysis. Several taxa were found to be different among the bird species (e.g., lowest median of Lactobacillus: 2.2% in Cockatiels; highest median of Lactobacillus: 79.4% in Lovebirds). Despite marked differences among individual pooled samples, each bird species harbored a unique fecal bacterial composition, based on the analysis of UniFrac distances. A predictive approach of metagenomic function and organism-level microbiome phenotypes revealed several differences among the bird species (e.g., a higher proportion of proteobacteria with the potential to form biofilms in samples from Northern Mockingbirds). The results provide a useful catalog of fecal microbes from pet birds and encourage more research on this unexplored topic. Full article
(This article belongs to the Special Issue Feature Papers of Birds 2021)
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12 pages, 3495 KiB  
Article
Effectivity of Two Cell Proliferation Markers in Brain of a Songbird Zebra Finch
by Lubica Kubikova, Justina Polomova, Viktoria Mikulaskova and Kristina Lukacova
Biology 2020, 9(11), 356; https://doi.org/10.3390/biology9110356 - 25 Oct 2020
Cited by 4 | Viewed by 2809
Abstract
There are two most heavily used markers of cell proliferation, thymidine analogues 5-bromo-2′-deoxyuridine (BrdU) and 5-ethynyl-2′-deoxyuridine (EdU) that are incorporated into the DNA during its synthesis. In neurosciences, they are often used consecutively in the same animal to detect neuronal populations arising at [...] Read more.
There are two most heavily used markers of cell proliferation, thymidine analogues 5-bromo-2′-deoxyuridine (BrdU) and 5-ethynyl-2′-deoxyuridine (EdU) that are incorporated into the DNA during its synthesis. In neurosciences, they are often used consecutively in the same animal to detect neuronal populations arising at multiple time points, their migration and incorporation. The effectivity of these markers, however, is not well established. Here, we studied the effectivity of equimolar doses of BrdU and EdU to label new cells and looked for the dose that will label the highest number of proliferating cells in the neurogenic ventricular zone (VZ) of adult songbirds. We found that, in male zebra finches (Taeniopygia guttata), the equimolar doses of BrdU and EdU did not label the same number of cells, with BrdU being more effective than EdU. Similarly, in liver, BrdU was more effective. The saturation of the detected brain cells occurred at 50 mg/kg BrdU and above 41 mg/kg EdU. Higher dose of 225 mg/kg BrdU or the equimolar dose of EdU did not result in any further significant increases. These results show that both markers are reliable for the detection of proliferating cells in birds, but the numbers obtained with BrdU and EdU should not be compared. Full article
(This article belongs to the Section Neuroscience)
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14 pages, 3048 KiB  
Article
Artificial Light at Night Increases Recruitment of New Neurons and Differentially Affects Various Brain Regions in Female Zebra Finches
by Stan Moaraf, Rachel Heiblum, Yulia Vistoropsky, Monika Okuliarová, Michal Zeman and Anat Barnea
Int. J. Mol. Sci. 2020, 21(17), 6140; https://doi.org/10.3390/ijms21176140 - 26 Aug 2020
Cited by 13 | Viewed by 3717
Abstract
Despite growing evidence that demonstrate adverse effects of artificial light at night (ALAN) on many species, relatively little is known regarding its effects on brain plasticity in birds. We recently showed that although ALAN increases cell proliferation in brains of birds, neuronal densities [...] Read more.
Despite growing evidence that demonstrate adverse effects of artificial light at night (ALAN) on many species, relatively little is known regarding its effects on brain plasticity in birds. We recently showed that although ALAN increases cell proliferation in brains of birds, neuronal densities in two brain regions decreased, indicating neuronal death, which might be due to mortality of newly produced neurons or of existing ones. Therefore, in the present study we studied the effect of long-term ALAN on the recruitment of newborn neurons into their target regions in the brain. Accordingly, we exposed zebra finches (Taeniopygia guttata) to 5 lux ALAN, and analysed new neuronal recruitment and total neuronal densities in several brain regions. We found that ALAN increased neuronal recruitment, possibly as a compensatory response to ALAN-induced neuronal death, and/or due to increased nocturnal locomotor activity caused by sleep disruption. Moreover, ALAN also had a differential temporal effect on neuronal densities, because hippocampus was more sensitive to ALAN and its neuronal densities were more affected than in other brain regions. Nocturnal melatonin levels under ALAN were significantly lower compared to controls, indicating that very low ALAN intensities suppress melatonin not only in nocturnal, but also in diurnal species. Full article
(This article belongs to the Special Issue Molecular Research on Light's Effects on Animals and Humans)
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17 pages, 1921 KiB  
Article
The Genome of Blue-Capped Cordon-Bleu Uncovers Hidden Diversity of LTR Retrotransposons in Zebra Finch
by Jesper Boman, Carolina Frankl-Vilches, Michelly da Silva dos Santos, Edivaldo H. C. de Oliveira, Manfred Gahr and Alexander Suh
Genes 2019, 10(4), 301; https://doi.org/10.3390/genes10040301 - 13 Apr 2019
Cited by 22 | Viewed by 7479
Abstract
Avian genomes have perplexed researchers by being conservative in both size and rearrangements, while simultaneously holding the blueprints for a massive species radiation during the last 65 million years (My). Transposable elements (TEs) in bird genomes are relatively scarce but have been implicated [...] Read more.
Avian genomes have perplexed researchers by being conservative in both size and rearrangements, while simultaneously holding the blueprints for a massive species radiation during the last 65 million years (My). Transposable elements (TEs) in bird genomes are relatively scarce but have been implicated as important hotspots for chromosomal inversions. In zebra finch (Taeniopygia guttata), long terminal repeat (LTR) retrotransposons have proliferated and are positively associated with chromosomal breakpoint regions. Here, we present the genome, karyotype and transposons of blue-capped cordon-bleu (Uraeginthus cyanocephalus), an African songbird that diverged from zebra finch at the root of estrildid finches 10 million years ago (Mya). This constitutes the third linked-read sequenced genome assembly and fourth in-depth curated TE library of any bird. Exploration of TE diversity on this brief evolutionary timescale constitutes a considerable increase in resolution for avian TE biology and allowed us to uncover 4.5 Mb more LTR retrotransposons in the zebra finch genome. In blue-capped cordon-bleu, we likewise observed a recent LTR accumulation indicating that this is a shared feature of Estrildidae. Curiously, we discovered 25 new endogenous retrovirus-like LTR retrotransposon families of which at least 21 are present in zebra finch but were previously undiscovered. This highlights the importance of studying close relatives of model organisms. Full article
(This article belongs to the Special Issue Repetitive DNA Sequences)
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16 pages, 3179 KiB  
Article
Lateral Asymmetry of Brain and Behaviour in the Zebra Finch, Taeniopygia guttata
by Lesley J. Rogers, Adam Koboroff and Gisela Kaplan
Symmetry 2018, 10(12), 679; https://doi.org/10.3390/sym10120679 - 1 Dec 2018
Cited by 12 | Viewed by 4318
Abstract
Lateralisation of eye use indicates differential specialisation of the brain hemispheres. We tested eye use by zebra finches to view a model predator, a monitor lizard, and compared this to eye use to view a non-threatening visual stimulus, a jar. We used a [...] Read more.
Lateralisation of eye use indicates differential specialisation of the brain hemispheres. We tested eye use by zebra finches to view a model predator, a monitor lizard, and compared this to eye use to view a non-threatening visual stimulus, a jar. We used a modified method of scoring eye preference of zebra finches, since they often alternate fixation of a stimulus with the lateral, monocular visual field of one eye and then the other, known as biocular alternating fixation. We found a significant and consistent preference to view the lizard using the left lateral visual field, and no significant eye preference to view the jar. This finding is consistent with specialisation of the left eye system, and right hemisphere, to attend and respond to predators, as found in two other avian species and also in non-avian vertebrates. Our results were considered together with hemispheric differences in the zebra finch for processing, producing, and learning song, and with evidence of right-eye preference in visual searching and courtship behaviour. We conclude that the zebra finch brain has the same general pattern of asymmetry for visual processing as found in other vertebrates and suggest that, contrary to earlier indications from research on lateralisation of song, this may also be the case for auditory processing. Full article
(This article belongs to the Special Issue Left Versus Right Asymmetries of Brain and Behaviour)
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