Search Results (41)

Cabbage (Brassica oleracea var. capitata), a member of the Brassicaceae family, is an important vegetable crop grown worldwide. Self-incompatibility (SI) in cabbage is a key trait that prevents self-fertilization and inbreeding, thereby maintaining genetic diversity within populations. Although several genes related to SI have been reported, its genetic control remains unclear. In this study, we developed an F₂ population from the highly self-compatible (SC) cabbage line 87-534 and the highly self-incompatible (SI) line 01-20, both of which exhibit the S5 haplotype. The segregation analysis of the F₂ population revealed the possible control of SI by a major gene with additional modifying genetic factors. Bulk segregant analysis sequencing (BSA-Seq) and RNA sequencing (RNA-Seq) were performed on SI and SC samples selected from the F₂ population. BSA-Seq revealed a candidate region on chromosome 7 (C07: 7.45 Mb to 8.93 Mb), including 32 differentially expressed genes (DEGs). RNA-Seq identified a total of 2400 DEGs between the two pools, and Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses suggested that plant hormone biosynthesis and signaling, plant immune response were significantly enriched and may be involved in SI. The combined analysis of BSA-Seq and RNA-Seq identified six candidate genes associated with SI, and their expression was confirmed using quantitative real-time PCR (qRT-PCR). Among them, Bol023956 encodes fructokinase, Bol023986 is involved in plant defense response, Bol024018 is related to pollen development, Bol024012 encodes a transport protein for phytohormones, Bol023943 encodes chorismate mutase 3, and Bol012515 is an important regulatory gene for chloroplast synthesis. These six genes, potentially linked to SI, should be targets for further validation. These findings provide insights into the molecular mechanisms of SI in cabbage and the selection of superior cabbage varieties. Full article

The introduction of Super-High-Density (SHD) olive orchards represents a crucial innovation in modern olive growing, enhancing sustainability. However, the long-term success of these planting systems depends strongly on cultivar selection, combining suitable vegetative and reproductive traits. This three-year field study investigated key floral biology parameters—flowering phenograms, gynosterility, and self-compatibility—of ten olive cultivars grown under irrigated conditions in southern Italy: ‘Arbequina’, ‘Arbosana’, ‘Cima di Bitonto’, ‘Coratina’, ‘Don Carlo’, ‘Frantoio’, ‘Favolosa’ (=‘Fs-17’), ‘I-77’, ‘Koroneiki’, and ‘Urano’ (=‘Tosca’). Flowering phenograms varied significantly across years and cultivars, showing temporal shifts related to chilling accumulation and yield of the previous year. Early blooming cultivars (‘Arbequina’, ‘Arbosana’, and ‘Coratina’) exhibited partial flowering overlap with mid-season ones, enhancing cross-pollination opportunities. Quantitative analysis of flowering overlap revealed that most cultivar combinations exceeded the 70% threshold required for effective pollination, although specific genotypes (‘Coratina’, ‘Fs-17’, and especially ‘I-77’) showed critical mismatches, while ‘Frantoio’ and ‘Arbequina’ emerged as the most reliable pollinizers. Gynosterility exhibited statistical differences among cultivars and canopy positions: ‘I-77’ showed the highest values (71.4%), while ‘Coratina’ and ‘Cima di Bitonto’ showed the lowest ones (7.3 and 8.4%, respectively). The median portions of the canopies generally displayed a greater number of sterile flowers (29.4%), reflecting the combined effect of genetic and environmental factors such as light exposure. In the inflorescence, the majority of gynosterile flowers were concentrated in the lower part, for all canopy portions (modal value). Self-compatibility tests were performed considering a fruit set of 1% as a threshold to discriminate. For open pollination, the fruit set was highly variable among cultivars, ranging from 0.5% in ‘I-77’ to 4.7% in ‘Arbosana’. Apart from ‘I77’, all varieties achieved a fruit set greater than 1%. Instead, for the self-pollination, only ‘Arbequina’, ‘Koroneiki’, ‘Frantoio’, and ‘Cima di Bitonto’ could be identified as pseudo-self-compatible, whereas ‘Coratina’, ‘Fs-17’, and the others were clearly self-incompatible and therefore unsuitable for monovarietal orchards in areas with limited availability of pollen. By integrating self-compatibility and gynosterility data, the cultivars were ranked according to reproductive aptitude, identifying ‘Cima di Bitonto’ and ‘Frantoio’ as the most fertile genotypes, whereas ‘Don Carlo’ and particularly ‘I-77’ showed severe genetic sterility constraints. The findings underline the critical role of floral biology in defining reproductive efficiency and varietal adaptability in SHD systems. This research provides valuable insights for optimizing cultivar selection, orchard design, and management practices, contributing to the development of sustainable, climate-resilient olive production models for Mediterranean environments. Full article

High Nature Value (HNV) mountain grasslands in the Eastern Carpathians are highly sensitive to changes in management intensity, particularly fertilization. This study assessed the effects of contrasting organic and mineral fertilization regimes on floristic composition, vegetation types, and diversity in an oligotrophic Nardus stricta grassland within an experimental framework established in 2021. The analysis is based on vegetation data collected over three consecutive years (2022–2024) from nine treatments, including an unfertilized control, organic fertilization with manure (10–30 t ha⁻¹ applied in autumn or spring), and mineral fertilization with nitrocalcar (Nitrocalc_20—200 kg ha⁻¹ calcium ammonium nitrate and Nitrocalc_30—300 kg ha⁻¹ calcium ammonium nitrate). Vegetation responses were evaluated using hierarchical cluster analysis, principal coordinates analysis (PCoA), multi-response permutation procedures (MRPP), indicator species analysis (ISA), and α-diversity indices. Six floristic types were identified along a pronounced trophic gradient ranging from oligotrophic to eutrophic communities. Low to moderate organic fertilization (10–20 t ha⁻¹) maximized species richness, diversity, and community evenness, maintaining a stable assemblage of oligotrophic and mesotrophic species. In contrast, high manure inputs (30 t ha⁻¹) and mineral fertilization resulted in rapid floristic simplification, loss of oligotrophic indicators, and dominance of competitive grasses. These results indicate that moderate organic fertilization represents an effective adaptive management option for conserving HNV mountain grasslands, whereas intensive mineral fertilization is incompatible with biodiversity conservation objectives. Full article

Climate change is jeopardizing global food security, with at least 713 million people facing hunger. To face this challenge, legumes as common beans could offer a nature-based solution, sourcing nutrients and dietary fiber, especially for rural communities in Latin America and Africa. However, since common beans are generally heat and drought susceptible, it is imperative to speed up their molecular introgressive adaptive breeding so that they can be cultivated in regions affected by extreme weather. Therefore, this study aimed to couple an advanced panel of common bean (Phaseolus vulgaris L.) × tolerant Tepary bean (P. acutifolius A. Gray) interspecific lines with Bayesian regression algorithms to forecast adaptation to the humid and dry sub-regions at the Caribbean coast of Colombia, where the common bean typically exhibits maladaptation to extreme heat waves. A total of 87 advanced lines with hybrid ancestries were successfully bred, surpassing the interspecific incompatibilities. This hybrid panel was genotyped by sequencing (GBS), leading to the discovery of 15,645 single-nucleotide polymorphism (SNP) markers. Three yield components (yield per plant, and number of seeds and pods) and two biomass variables (vegetative and seed biomass) were recorded for each genotype and inputted in several Bayesian regression models to identify the top genotypes with the best genetic breeding values across three localities on the Colombian coast. We comparatively analyzed several regression approaches, and the model with the best performance for all traits and localities was BayesC. Also, we compared the utilization of all markers and only those determined as associated by a priori genome-wide association studies (GWAS) models. Better prediction ability with the complete SNP set was indicative of missing heritability as part of GWAS reconstructions. Furthermore, optimal SNP sets per trait and locality were determined as per the top 500 most explicative markers according to their β regression effects. These 500 SNPs, on average, overlapped in 5.24% across localities, which reinforced the locality-dependent nature of polygenic adaptation. Finally, we retrieved the genomic estimated breeding values (GEBVs) and selected the top 10 genotypes for each trait and locality as part of a recommendation scheme targeting narrow adaption in the Caribbean. After validation in field conditions and for screening stability, candidate genotypes and SNPs may be used in further introgressive breeding cycles for adaptation. Full article

This study investigates the seasonal and floral phenology, breeding strategies, and floral morphology of Azorina vidalii, an Azorean endemic Campanulaceae with hermaphroditic, protandrous flowers, dichogamy and secondary pollen presentation. Seasonal phenology was recorded in four field populations and floral phenology in a garden population. Reproductive strategies were assessed via controlled hand pollinations in one field population. Floral morphometrics were analysed using 23 floral and five pollen traits from 121 flowers across fourteen populations throughout the Azores archipelago. Non-parametric and parametric tests, discriminant analysis, and reproductive indices were used to infer answers to this study’s goals. Results showed that temperature and humidity influenced vegetative and reproductive phenophases. The male phase was shorter than the female, likely due to pollen dynamics, and some functional overlap suggested incomplete dichogamy. Geographic variation in floral traits indicated morphological differentiation across subarchipelagos, presumably linked to environmental factors or isolation. Reproductive indices suggested a mixed mating system, partial self–incompatibility and signs of inbreeding depression. Fertilisation was absent without pollinators, and spontaneous selfing was excluded due to an absence of pollen–pistil contact during stigma retraction. These findings contribute to understanding the reproductive biology and morphologic variation in A. vidalii. The implications of these findings for the conservation of this insular plant are discussed. Full article

Kiwifruit, with its unique flavor, nutritional value, and economic benefits, has gained significant attention in agriculture production. Kiwifruit plants have traditionally been propagated without grafting, but recently, grafting has become a more common practice. A new and complex disease called Kiwifruit Vine Decline Syndrome (KVDS) has emerged in different kiwifruit-growing areas. The syndrome was first recognized in Italy, although similar symptoms had been observed in New Zealand during the 1990s before subsequently spreading worldwide. While kiwifruit was not initially grafted in commercial orchards, the expansion of cultivation into regions with heavy soils or other challenging environmental conditions may make grafting selected kiwifruit cultivars onto KVDS-resistant or -tolerant rootstocks essential for the future of this crop. Grafting is a common horticultural practice, widely used to propagate several commercially important fruit crops, including kiwifruits, apples, grapes, citrus, peaches, apricots, and vegetables. Grafting methods and genetic compatibility have a crucial impact on fruit quality, yield, environmental adaptability, and disease resistance. Achieving successful compatibility involves a series of steps. During grafting, some scion/rootstock combinations exhibit poor graft compatibility, preventing the formation of a successful graft union. Identifying symptoms of graft incompatibility can be challenging, as they are not always evident in the first year after grafting. The causes of graft incompatibility are still largely unknown, especially in the case of kiwifruit. This review aims to examine the mechanisms of graft compatibility and incompatibility across different fruit crops. This review’s goal is to identify potential markers and techniques that could enhance grafting success and boost the commercial production of kiwifruit. Full article

All 32 Brazilian species of Parodia Speg (Cactaceae) occurring in Rio Grande do Sul State are considered threatened, according to the IUCN criteria. Until 2021, Parodia rechensis (CR) was known by only two small populations. However, a new population with over 400 individuals was discovered in 2021, prompting the study of its reproductive biology as a way to promote its conservation. Anthesis, breeding system, and natural pollination were studied in the field. The breeding system was studied by applying controlled pollination treatments to plants excluded from pollinators (bagged). Germination features were studied at the Seed Bank of the Porto Alegre Botanical Garden under controlled temperatures (20, 25, and 30 °C). The anthesis is diurnal and lasts for up to four days. The flowers offer pollen as the sole resource to the pollinators. The study species is unable to set fruit and seed without the agency of pollinators and has self-incompatible (unable to set fruit and seeds when pollinated with pollen of the same individual) characteristics that can considerably restrict its reproduction. Native bees of Halictidae and Apidae (Hymenoptera) are the main pollinators, with a smaller contribution of Melyridae (Coleoptera) and Syrphidae (Diptera). Natural fruit set is moderate (≤64%, per individual), but the species presents vegetative growth, producing several branches from the mother plant. Seeds showed the optimum germination rate at 20 °C and an inhibition of 75% in germinability at 30 °C. Our findings suggest the need to manage the species’ habitat to guarantee the permanency of the plants and healthy populations of pollinators as well. Our findings raise concerns about the germination and establishment of new individuals in the context of rising temperatures caused by climate change. Suggestions for the possible management of the extant populations are made. Full article

Cyperus esculentus seeds are often considered irrelevant for C. esculentus spread as their fragile seedlings would not establish or survive in agricultural soils. However, the ever-increasing spread and upsurge of genetically different clonal populations in NW-Europe raises questions about the establishment of C. esculentus seeds and the reproductive performance of seedlings. Indeed, little is known about the potential of C. esculentus seedlings to grow and propagate under outdoor conditions relative to plants grown from tubers. Seeds from different clonal populations were sown outdoors in various soil types and under different irrigation levels (rainfed, irrigated) to assess seed germination and seedling establishment. Additionally, two pot experiments were conducted with three different plant types (plants originating from mother tubers and from seeds harvested on open- or self-pollinated plants) obtained from eight clonal populations. Plant performance was investigated by measuring vegetative and generative parameters. Germination under outdoor conditions was significantly affected by clonal population and was highest in irrigated sand (5.3%). Germination in sand was 4.1 times higher in irrigated plots than in rainfed plots. In irrigated plots, germination was 3.8 and 4.7 times higher in sand than in sandy loam and clay, respectively. Depending on the year, three out of five to five out of six clonal populations produced more tubers when grown from mother tubers than from seeds. Maximal tuber reproduction factors of 1:965, 1:752, and 1:618 were achieved for plants from mother tubers and seeds from open- and self-pollinated flowers, respectively. Plants originating from open-pollinated seedlings have the potential to equal or exceed the vegetative reproductive capacity of plants originating from mother tubers. As a result of their ability to establish in situ and their substantial vegetative reproductive capacity, C. esculentus seedlings are highly relevant for agriculture and merit appropriate attention in any integrated weed management system targeting C. esculentus. Full article

Grapevine is one of the most economically important fruit crops cultivated worldwide. However, grapevine is highly susceptible to virus infections and exposed to the most diverse forms of viral diseases compared to other fruit crops, and virus-induced incompatibility affects plant growth to different degrees ranging from decline to death. The influence of virus-induced incompatibility could be mitigated to an acceptable level by using appropriate rootstocks. However, the viral tolerance of various grapevine rootstocks with diverse genetic backgrounds remains unclear, along with the identification of the specific viral tolerance factors. In this study, the viral tolerance of 21 grapevine rootstocks was evaluated in a green grafting system. Cabernet Franc varieties infected with a single virus [grapevine leafroll associated virus-1 (GLRaV-1)], a co-infection of two viruses (GLRaV-1 plus grapevine virus A—GVA), and no infection were used as the scions, respectively. The vegetative growth and photosynthetic function of the grafts were analyzed 4 months after grafting. The results indicated that some rootstocks could alleviate the influence of the virus infection, with vegetative growth and photosynthetic function sustained at a normal level, whereas other rootstocks were susceptible to the virus infection, resulting in a decline in the growth and photosynthetic function of the grafts. Our research provides evidence for the existence and diversity of viral tolerance among grapevine rootstocks, offering important information for appropriate rootstock selection in the establishment of new vineyards and in the breeding of grapevine rootstocks with enhanced viral tolerance. Full article

Radish (Raphanus sativus L.), a root vegetable belonging to the Brassicaceae family, is considered one of the representative crops displaying sporophytic self-incompatibility (SSI). The utilization of a self-incompatibility system in F₁ breeding can improve the efficiency of cross-combinations, leading to a reduction in breeding time and aiding in the development of novel F₁ varieties. The successful implementation of this system necessitates the rapid and accurate identification of S haplotypes in parental lines. In this study, we identified a total of nine S haplotypes among 22 elite radish lines through Sanger sequencing. Subsequently, we obtained sequences for showing a 95% similarity to nine S haplotypes, along with sequences identified by other researchers using BLAST. Following this, multiple sequence alignment (MSA) was conducted to identify SRK and SLG sequence similarities, as well as polymorphisms within the class I and II groups. Subsequently, S haplotype-specific marker sets were developed, targeting polymorphic regions of SRK and SLG alleles. These markers successfully amplified each of the nine S haplotypes. These markers will play a crucial role in the rapid and precise identification of parental S haplotypes in the radish F₁ breeding process, proving instrumental in the radish F₁ purity test. Full article

Grafting techniques represent an efficient tool to enhance plant growth and development. The study aims to explore the effects of different grafting combinations on the growth of eggplants under diverse greenhouse conditions. Eggplant cultivar Black bell (Bb) was employed as scion, while the hybrid F₁ Beaufort (Be) and Solanum torvum (To) were utilized as rootstock. The hypothesis behind this study pertains to grafting incompatibility with Beaufort F1. It postulates that this incompatibility can be mitigated by manipulating soil and greenhouse temperatures. The experimental factors encompassed plant combinations (Bb, Be/Bb and To/Bb), as well greenhouse and substrate temperature (both cold or heated). The Be/Bb combination showed higher values of plant vegetative traits, but it exhibited low grafting compatibility. Additionally, physiological analysis confirmed the presence of excessive growth and vegetative disorder within the Be/Bb combination. Examination of the xylem vessels revealed notable differences between the grafting combination involving Bb and the rootstock F1 hybrid Be/Bb, compared to the one with To/Bb and the non-grafted Bb. Specifically, the area, diameter and number of xylem vessels were approximatively 45% higher in Be/Bb than in To/Bb and the non-grafted Bb. Furthermore, a robust linear correlation was observed between plant height with morphometric and physiological traits, except fruits sets. This study lays the basis for a novel protocol for agriculture, addressing the excessive vegetative growth in rootstocks regulating air and substrate temperatures. Full article

To address the complex challenges faced by our planet such as rapidly changing climate patterns, food and nutritional insecurities, and the escalating world population, the development of hybrid vegetable crops is imperative. Vegetable hybrids could effectively mitigate the above-mentioned fundamental challenges in numerous countries. Utilizing genetic mechanisms to create hybrids not only reduces costs but also holds significant practical implications, particularly in streamlining hybrid seed production. These mechanisms encompass self-incompatibility (SI), male sterility, and gynoecism. The present comprehensive review is primarily focused on the elucidation of fundamental processes associated with floral characteristics, the genetic regulation of floral traits, pollen biology, and development. Specific attention is given to the mechanisms for masculinizing and feminizing cucurbits to facilitate hybrid seed production as well as the hybridization approaches used in the biofortification of vegetable crops. Furthermore, this review provides valuable insights into recent biotechnological advancements and their future utilization for developing the genetic systems of major vegetable crops. Full article

Brassica vegetables are very important to human beings. Self-incompatibility (SI) is a common phenomenon in Brassica. Breeding by SI lines is an important way to utilize heterosis of Brassica vegetables. It is believed that the SI inheritance in Brassica species is controlled by three linkage genes on the S-locus, including SRK (S-locus receptor kinase), SCR (S-locus cystine-rich protein)/SP11 (S-locus protein 11), and SLG (S-locus glycoprotein). SRK is the female determinant and SCR/SP11 is the pollen S gene. The expression of SLG is necessary for SRK, and it enhances the SRK-mediated SI reaction. In addition to these three S-locus genes, some other functional molecules also have significant regulatory effects on SI, such as ARC1 (arm repeat containing 1), MLPK (M-locus protein kinase), Exo70A1 (exocyst compounds), THLl/THL2 (thioredoxin H-like), MOD (aquaporin), SLR (S-locus-related glycoprotein), BPCI (pollen calcium-binding protein I), etc. SI is also associated with the dominant/recessive relationship between S alleles. Here, the genetic elements and molecular mechanisms of SI, mainly in Brassica vegetables, are reviewed. Full article

Biological control of Cryphonectria parasitica fungus, causal agent of chestnut blight, by virus infection (hypovirulence) has been shown to be an effective control strategy against chestnut blight in Europe and some parts of North America. The most studied mycovirus is the Cryphonectria hypovirus 1 (CHV-1) type species of the Hypoviridae family. To efficiently provide biocontrol, the virus must be able to induce hypovirulence in its fungal host in chestnut trees. Here, two different CHV-1 subtype I virus strains (E-5 and L-18), gained by transmissions, were tested for their hypovirulence induction, biocontrol potential, and transmission between vegetatively compatible (VCG) and incompatible fungal isolate groups in sweet chestnut seedlings and branches. Both strains of CHV-1 showed great biocontrol potential and could protect trees by efficiently transmitting CHV-1 by hyphal anastomosis between fungal isolates of the same VCG and converting virulent to hypovirulent cankers. The hypovirulent effect was positively correlated with the virus concentration, tested by four different reverse-transcription PCRs, two end-point and two real-time methods, one of which represents a newly developed real-time PCR for the detection and quantification of CHV-1. Full article

Walnuts (Juglans sp.) are allogamous species. Seed-derived plants are not always superior to the selected parent. Clonal propagation of selected stock plants is an essential requirement for the clonal fidelity of the descendants and to maintain their genetic structure. Selection of the desired plant is realized only after reaching maturity, and characterizing and evaluating the performance of adult trees require a long time. Clonal propagation methods ensure proper transmission of characters to descendants and can be used effectively in breeding programs. The commercialization of a cultivar or rootstock depends on the success of vegetative propagation. Walnuts, like other tree species, are recalcitrant to conventional vegetative propagation methods and even non-conventional in vitro culture (micropropagation). Elucidation of factors determining the success of cloning of desired plants would contribute to understanding current limitations for most genotypes of Juglans. We outline the role of grafting and cuttings and stool layering, as well as in vitro culture on walnut multiplication. These techniques are, in practice, entirely different; nevertheless, they are affected by common factors. The incompatibility of stock-scion and the reduced ability of stem cuttings to root are the main bottlenecks for grafting and cutting, respectively. Genotype, age, and physiological status, reinvigoration or rejuvenation-treatment of donor plant, period of harvesting and processing of explants critically affect the results of methods followed. The in vitro culture technology is the most suitable for walnut cloning. This also has constraints that affect commercial propagation of most desired genotypes. We describe comprehensive results and synthesis in this review on the asexual reproduction of walnuts, providing a better comprehension of the limiting factors and the ways to overcome them, with direct implications on commercial propagation and the releasing of outstanding genotypes. Full article