Search Results (132)

Ectomycorrhizal symbiosis is a cornerstone of ecosystem health, facilitating nutrient uptake, stress tolerance, and biodiversity maintenance in trees. Optimizing Pinus armandii–Tuber indicum mycorrhizal synthesis enhances the ecological stability of coniferous forests while supporting high-value truffle cultivation. This study conducted a pot experiment to compare the effects of three root nutrient regulations—Aolu 318S (containing N-P₂O₅-K₂O in a ratio of 15-9-11 (w/w%)), Aolu 328S (11-11-18), and Youguduo (19-19-19)—on the mycorrhizal synthesis of P. armandii–T. indicum. The results showed that root nutrient supplementation significantly improved the seedling crown, plant height, ground diameter, biomass dry weight, and mycorrhizal infection rate of both the control and mycorrhizal seedlings, with the slow-release fertilizers Aolu 318S and 328S outperforming the quick-release fertilizer Youguduo. The suitable substrate composition in this experiment was as follows: pH 6.53–6.86, organic matter content 43.25–43.49 g/kg, alkali-hydrolyzable nitrogen 89.25–90.3 mg/kg, available phosphorus 83.69–87.32 mg/kg, available potassium 361.5–364.65 mg/kg, exchangeable magnesium 1.17–1.57 mg/kg, and available iron 33.06–37.3 mg/kg. It is recommended to mix the Aolu 318S and 328S solid fertilizers evenly into the substrate, with a recommended dosage of 2 g per plant. These results shed light on the pivotal role of a precise N-P-K ratio regulation in fostering sustainable ectomycorrhizal symbiosis, offering a novel paradigm for integrating nutrient management with mycorrhizal biotechnology to enhance forest restoration efficiency in arid ecosystems. Full article

Forest ecosystems represent a natural repository of biodiversity, bioenergy, food, timber, water, medicine, wildlife shelter, and pollution control. In many countries, forests offer great potential to provide biogenic resources that could be utilized for large-scale biotechnological synthesis and products. The evolving nanotechnology could be an excellent platform for the transformation of forest products into value-added nanoparticles (NPs). It also serves as a tool for commercial production, placing the forest at the heart of conservation and sustainable management strategies. NPs are groups of atoms with a size ranging from 1 to 100 nm. This review analyzes the scholarly articles published over the last 25 years on the forest and woody plant-based green synthesis of NPs, highlighting the plant parts and applications discussed. The biosynthesis of nanomaterials from plant extracts provides inexpensiveness, biocompatibility, biodegradability, and environmental nontoxicity to the resultant NPs. The leaf is the most critical organ in woody plants, and it is widely used in NP biosynthesis, perhaps due to its central functions of bioactive metabolite production and storage. Most biosynthesized NPs from tree species have been used and tested for medical applications. For sustainable advancements in forest-based nanotechnology, broader species coverage, expanded applications, and interdisciplinary collaboration are essential. Full article

This study provides a bibliometric analysis of 926 scientific publications on Argania spinosa, representing the first investigation covering all aspects of the argan tree. By combining bibliometric performance indicators and scientific mapping, based on commonly used approaches in previous studies, the analysis examines the evolution, structure, and gaps in argan-related research. The results reveal that scientific production accelerated after 1996 during an industrial exploitation period, driven by the emergence of women’s cooperatives, international certifications, and national development programs. Morocco dominates the argan research landscape, benefiting from targeted policy support, international collaborations, and the species’ endemic status. Two major research aspects were identified: the valuation of argan oil, focusing on its chemical and therapeutic properties; and ecological restoration, encompassing genetic diversity, reforestation practices, and climate adaptation strategies. Despite these advancements, critical gaps remain in operational reforestation, assisted migration, post-plantation monitoring, and the integration of ecological modeling. Research remains skewed toward oil valuation, with insufficient attention to long-term forest sustainability under climate change. Future efforts should adopt a multidisciplinary framework that integrates genomics, nursery innovation, biotechnology, molecular genetics, digital monitoring tools, and socio-institutional governance. Research should also emphasize optimizing by-product use, enhancing climate resilience, and promoting gender-equitable, community-based forest management. Full article

Plastic, a ubiquitous part of our daily lives, has become a global necessity, with annual production exceeding 300 million tons. However, the accumulation of synthetic polymers in our environment poses a pressing global challenge. To address this urgent issue, fungi have emerged as potential agents for plastic degradation. In our previous manuscript, ‘A Review of the Fungi That Degrade Plastic’, we explored the taxonomic placement of plastic-degrading fungi across three main phyla: Ascomycota, Basidiomycota, and Mucoromycota. In this review, we built upon that foundation and aimed to further explore the taxonomic relationships of these fungi in a comprehensive and detailed manner, leaving no stone unturned. Moreover, we linked metabolic activity and enzyme production of plastic-degrading fungi to their taxonomy and summarized a phylogenetic tree and a detailed table on enzyme production of plastic-degrading fungi presented here. Microbial enzymes are key players in polymer degradation, operating intra-cellularly and extra-cellularly. Fungi, one of the well-studied groups of microbes with respect to plastic degradation, are at the forefront of addressing the global issue of plastic accumulation. Their unique ability to hydrolyze synthetic plastic polymers and produce a wide range of specific enzymes is a testament to their potential. In this review, we gather and synthesize information concerning the metabolic pathways of fungi involved in the degradation of plastics. The manuscript explores the diverse range of specific enzymes that fungi can produce for plastic degradation and the major pathways of plastic metabolism. We provide a listing of 14 fungal enzymes (Esterase, Cutinase, Laccase, Peroxidases, Manganese peroxidase, Lignin peroxidase, Oxidoreductases, Urease, Protease, Lipase, Polyesterase, Dehydrogenase, Serine hydrolase, and PETase) involved in pathways for plastic degradation alongside the relevant fungi known to produce these enzymes. Furthermore, we integrate the fungi’s enzyme-producing capabilities with their taxonomy and phylogeny. Taxonomic and phylogenetic investigations have pinpointed three primary fungal classes (Eurotiomycetes, Sordariomycetes (Ascomycota), and Agaricomycetes (Basidiomycota)) as significant plastic degraders that produce the vital enzymes mentioned earlier. This paper provides a foundational resource for recognizing fungal involvement in the biodegradation of synthetic polymers. It will ultimately advance fungal biotechnology efforts to address the global issue of plastic accumulation in natural environments. Full article

Biodesulfurization (BDS) is a clean technology that uses microorganisms to efficiently remove sulfur from recalcitrant organosulfur compounds present in fuels (fossil fuels or new-generation fuels resulting from pyrolysis and hydrothermal liquefaction). One of the limitations of this technology is the low desulfurization rates. These result in the need for greater amounts of biocatalyst and lead to increased production costs. To mitigate this issue, several approaches have been pursued, such as the use of alternative carbon sources (C-sources) from agro-industrial waste streams or the co-production of high-added-value products by microorganisms. The main goal of this work is to assess the potential of strawberry tree fruit residue (STFr) as an alternative C-source for a BDS biorefinery using Gordonia alkanivorans strain 1B, a well-known desulfurizing bacterium with high biotechnological potential. Hence, the first step was to produce sugar-rich liquor from the STFr and employ it in shake-flask assays to evaluate the influence of different pretreatments (treatments with 1–4% activated charcoal for prior phenolics removal) on metabolic parameters and BDS rates. Afterwards, the liquor was used as the C-source in chemostat assays, compared to commercial sugars, to develop and optimize the use of STFr-liquor as a viable C-source towards cost-effective biocatalyst production. Moreover, the high-market-value bioproducts simultaneously produced during microbial growth were also evaluated. In this context, the best results, considering both the production of biocatalysts with BDS activity and simultaneous bioproduct production (carotenoids and gordofactin biosurfactant/bioemulsifier) were achieved when strain 1B was cultivated in a chemostat with untreated STFr-liquor (5.4 g/L fructose + glucose, 6:4 ratio) as the C-source and in a sulfur-free mineral-minimized culture medium at a dilution rate of 0.04 h⁻¹. Cells from this steady-state culture (STFr L1) achieved the highest desulfurization with 250 mM of dibenzothiophene as a reference organosulfur compound, producing a maximum of ≈213 mM of 2-hydroxibyphenil (2-HBP) with a corresponding specific rate (q_2-HBP) of 6.50 µmol/g(_DCW)/h (where DCW = dry cell weight). This demonstrates the potential of STFr as a sustainable alternative C-source for the production of cost-effective biocatalysts without compromising BDS ability. Additionally, cells grown in STFr L1 also presented the highest production of added-value products (338 ± 15 µg/g_(DCW) of carotenoids and 8 U/mL of gordofactin). These results open prospects for a future G. alkanivorans strain 1B biorefinery that integrates BDS, waste valorization, and the production of added-value products, contributing to the global economic viability of a BDS process and making BDS scale-up a reality in the near future. Full article

In Thailand, mangrove forests form a major component of the Andaman coastal ecosystems in the southern provinces. However, studies on their microbial assemblage largely revolved around groups of bacteria, fungi, and eukaryotic microalgae, while the diversity of cyanobacteria in these regions remains almost unknown. This taxonomic study applied the polyphasic approach to examine seven cyanobacterial strains collected from different mangrove environments (including soil crust, tree bark, wood, and rock surface) across Ranong, Phang-Nga, and Phuket provinces. The comprehensive analysis combining morphology, ecology, 16S rRNA phylogenetic relationships, genetic identity, ITS secondary structure, and ITS dissimilarity resulted in the first records of the genera Picosynechococcus, Allocoleopsis, and Sirenicapillaria in Thailand, and led to the description of a new species, Picosynechococcus mangrovensis sp. nov. This new species was differentiated from the type species P. fontinalis based on the distinct 16S rRNA gene phylogenetic position, low 16S rRNA genetic similarity, its slightly halophilic nature, and ability to form pseudo-filaments with up to 160 cells. Our research significantly expands the documented cyanobacterial diversity of Southeast Asian mangrove ecosystems, establishing a critical foundation for future ecological and biotechnological investigations in these understudied yet vital tropical habitats. Full article

Drought stress substantially impacts the development and viability of Populus spp., which are essential for forestry and bioenergy production. This review summarizes and describes the functions of phytohormones, such as abscisic acid, auxins, and ethylene, in modulating physiological and molecular responses to water scarcity. Drought-induced ABA-mediated stomatal closure and root extension are essential adaptation processes. Furthermore, auxin–ABA (abscisic acid) interactions augment root flexibility, whereas ethylene regulates antioxidant defenses to alleviate oxidative stress. The advantageous function of endophytic bacteria, specifically plant growth-promoting rhizobacteria (PGPR), can augment drought resistance in spruce trees by enhancing nutrient absorption and stimulating root development. Structural adaptations encompass modifications in root architecture, including enhanced root length and density, which augment water uptake efficiency. Similarly, Arbuscular Mycorrhizal Fungi (AMF) significantly enhance stress resilience in forest trees. AMF establishes symbiotic relationships with plant roots, improving water and nutrient uptake, particularly phosphorus, during drought conditions. Furthermore, morphological alterations at the root–soil interface enhance interaction with soil moisture reserves. This review examines the complex mechanisms by which these hormones influence plant responses to water shortage, aiming to offer insights into prospective techniques for improving drought tolerance in common tree species and highlights the importance of hormone control in influencing the adaptive responses of prominent trees to drought stress, providing significant implications for research and practical applications in sustainable forestry and agriculture. These findings lay the groundwork for improving drought tolerance in Populus spp. by biotechnological means and by illuminating the complex hormonal networks that confer drought resistance. Full article

The devastating tristeza epidemic swept through South American citrus groves in the 1930s and subsequently spread to most citrus-growing regions worldwide, causing varying degrees of damage and prompting significant changes in citrus cultivation practices. The causal agent of the disease, citrus tristeza virus (CTV), belongs to the genus Closterovirus in the family Closteroviridae. CTV virions are approximately two microns long and possess the largest known positive-strand RNA genome in plants, spanning 19.3 kb. The history of tristeza disease and CTV’s molecular biology and taxonomic relationships have been extensively reviewed in the scientific literature. This paper primarily focuses on the author’s personal experiences with tristeza disease and its causal agent over the past six decades. The journey began during a period when biological indexing was the primary diagnostic tool. It later progressed through the isolation of purified CTV particles, which served as a practical diagnostic tool for CTV suppression efforts in Israel during the 1970s. However, biological indexing was first replaced by electron microscopy, followed by ELISA procedures; both were eventually abandoned after it was discovered that many ELISA-positive infections were caused by symptomless CTV isolates, even on trees grafted onto sour orange rootstocks. In retrospect, my work on CTV can be categorized into three main phases. It began with the biological phase, inherited from earlier generations of citrus virologists, followed by the isolation and partial characterization of CTV virions, and culminated in the genomic era. While we live in an age of remarkable biotechnological achievements, my recommendation for future CTV research is to integrate both biological and genomic approaches rather than viewing them as mutually exclusive. This is particularly important for economically significant pathogens such as CTV, which should be studied continuously as both biological agents and molecular pathogens. Full article

Platonia insignis, a native tree from the Amazon, has a high market demand due to its various uses, such as producing pulps and ice creams from its fruit and furniture from its wood. This review aims to systematize the scientific knowledge about the species and explore the potential of biotechnology to elucidate its growth, development, and fruiting mechanisms. Databases such as the Web of Science, Scopus, the Brazilian Agricultural Research Database, and PubMed were consulted using keywords like “P. insignis”, “bacuri”, and “bacurizeiro”. Of the 67 selected articles, it was observed that rigorous research on P. insignis is limited. Current management is based on empirical observations, but biotechnology could expedite the domestication process. Additionally, studying medicinal compounds from P. insignis could open new economic opportunities, encourage germplasm conservation, and drive genetic breeding. Full article

Background: The NAC transcription factor family of genes is one of the largest families of transcription factors in plants, playing important functions in plant growth and development, response to adversity stress, disease resistance, and hormone signaling. In this study, we identified the number of members of the Panax notoginseng NAC (PnNAC) gene family and conducted a comprehensive analysis of their physicochemical characteristics, chromosomal location, evolutionary features, and expression patterns both in different parts of the plant at different growth stages and in response to infection by Alternaria panax. Methods: The NAC gene family in P. notoginseng was identified using Hidden Markov Model (HMMER) and National Center of Biotechnology Information Conserved Domain Database (NCBI CDD), and their physicochemical properties were analyzed with Perl scripts. Phylogenetic relationships were determined using Clustal Omega and FastTree, and gene structures were visualized with an R script. Promoter regions were analyzed with PlantCARE, motifs with MEME and ggmotif, and transcriptome data were processed using Hical Indexing for Spliced Alignment of Transcripts (HISAT2) and HTseq. Results: This study identified 98 PnNAC genes in P. notoginseng, analyzed their characteristics (protein lengths 104–882 aa, molecular weights 11.78–100.20 kDa, isoelectric points 4.12–9.75), location (unevenly distributed on 12 chromosomes, no tandem repeats), evolution, and expression patterns (distinct in different parts, growth stages, and after A. panax infection). Conclusions: PnNAC plays an important role in the growth and development of P. notoginseng and in its response to A. panax. PnNAC could be a candidate gene for further research on and functional analysis of P. notoginseng disease resistance. Full article

Background: The phylogenetic resolution within the Gloydius halys-intermedius Complex remains debatable due to the following reasons: loci selection in previous studies varied between authors; limited dataset (1−5 mitochondrial or nuclear gene fragments); lack of sampling density; and nodal supports at specific nodes remain weak, specifically within Gloydius cognatus, G. halys, and G. stejnegeri. Objectives: To revise the taxonomic and phylogenetic relationships within the G. halys-intermedius Complex, we reconstructed the molecular phylogeny and performed species delimitation based on the complete mitochondrial genomes. Methods: In this study, twelve nomenclatural groups of Gloydius species were involved in the computation of Bayesian phylogenomic inference, five of the twelve nomenclature groups were newly sequenced, while the rest were acquired from the National Center for Biotechnology Information (NCBI). The Bayesian phylogenomic inference was constructed based on 13 mitochondrial protein-coding genes. Species delimitation was performed by two distance-based methods (ABGD and ASAP) and two tree-based methods (GMYC and bPTP). Results: This research resolved the systematic relationship within the G. intermedius Complex with the support of mitogenome-based phylogenomics, while indicating cryptic diversity within the Gloydius halys-intermedius Complex: G. intermedius samples from South Korea show as paraphyletic to the cluster of the samples from northeastern China. Species delimitation results based on four models resemble each other, supporting Gloydius caucasicus, G. cognatus, G. halys, and G. stejnegeri, each representing full species. The species delimitation results of this research also resemble the nomenclatural species based on previous morphometrical results. This research indicates that species delimitation efforts based on the phylogenomic approach would likely resolve complex evolutionary relationships. Full article

The use of silver nanoparticles (AgNPs) has gained importance in agriculture in recent years thanks to their unique characteristics, including their antimicrobial capacity and their ability to promote plant growth. Due to these attributes, AgNPs are considered a promising solution for the future of agriculture, offering significant potential to address the challenges the sector confronts currently. However, it is important to adjust the application conditions, depending on the target and the crop used, to improve AgNP treatment efficiency. This review compiles recent advances in the use of AgNPs for crop production, both in and ex vitro. AgNPs promote growth and alleviate biotic and abiotic stresses through different ex vitro application methods. They are also efficiently used in vitro to improve plant culture and pathogen elimination. In addition, the safety and toxicity associated with their use are discussed. AgNPs are a novel tool with great potential for the agricultural sector, but it is still necessary to continue researching the mechanisms of AgNP action in order to optimize their application in each specific case. Full article

Sweet cherry (Prunus avium L.) is a valuable fruit crop for fresh consumption. Due to its early availability in season, it achieves relatively high prices on the market. Self-fertile cultivar Lapins is one of the world’s leading sweet cherry varieties. Intensive cherry production seeks for new technologies such as using more adaptable rootstocks and microbiological products that could help plants adopt more sustainable growth in different soils/climates. The aim of this work is to determine the substrate properties, vegetative growth, leaf chlorophyll and mineral content of maiden trees grafted on three different rootstocks due to the application of growth-promoting rhizobacteria. A pot experiment was carried out on one-year-old maiden trees of cv. Lapins grafted on SL 64, MaxMa 14 and Gisela 5 and grown in 12 L plant pots filled with commercial substrate. Plant growth-promoting rhizobacteria Azospirillum brasilense was added by watering the plants with 1.12 g L⁻¹ per pot once a month (T₁) or every two months (T₂) from March to September with seven treatments in T₁ and four treatments in T₂. At the same time, control (C) plants were watered with rainwater. Plant height, trunk circumference and leaf chlorophyll content index (CCI) were measured. In addition, shoot growth and internode number were measured in three development stages (BBCH 34, 39 and 91). The substrate and leaf samples were collected and analyzed in the laboratory in accordance with established procedures. Data were processed by ANOVA and the Tukey test. Results have showed that rootstock affected substrate electrical conductivity (EC); nitrate (NO₃⁻), phosphorous (P₂O₅), calcium (Ca) and magnesium (Mg) content, including mineral nitrogen (N) content; tree height, circumference, shoot length and internode number; the leaf chlorophyll content index (CCI); and leaf potassium (K), Ca and Mg content. Furthermore, treatment significantly affected the CCI, average internode length, ammonia (NH₄⁺) and Ca content in the substrate and leaf N, Ca and Mg content. Rhizobacteria A. brasilense can be used as an additional biofertilizer in sustainable agricultural practices for obtaining healthier sweet cherry maiden trees, but microbial biotechnology rules must be respected. Full article

Mimusops zeyheri Sond. (Milkwood) is an indigenous fruit tree species with considerable ecological, cultural, and nutritional significance that remains underexploited. This review synthesizes current knowledge on its distribution, taxonomy, phytochemistry, ethnomedicinal applications, ecological functions, genetic diversity, and biotechnological potential. A systematic literature search, spanning 1949 to April 2024, yielded 87 relevant publications from an initial 155. Mimusops zeyheri plays a crucial role in supporting the cultural traditions and economic activities of Indigenous Southern African Communities. Its distribution encompasses South, East, and Southern Tropical Africa, with substantial populations across South African provinces. Ethnomedicinally, various plant parts treat conditions including wounds, gastrointestinal issues, and diabetes. The leaves (34%) and roots (32%) are used, with infusion (33%) and decoction (31%) as primary preparation methods. Oral administration (70%) is the most common, primarily addressing skin conditions (18%). Despite its nutritional richness, a standardized nutrient profile is lacking. Limited genetic diversity studies underscore the need for further research. This study highlights Mimusops zeyheri’s multifaceted importance and research gaps, particularly in other Southern African countries. Future investigations should focus on comprehensive phytochemical analysis, ethnomedicinal validation, ecological conservation, genetic diversity assessment, and biotechnological applications. Multidisciplinary collaborations are recommended to promote sustainable utilization while preserving traditional practices. Full article