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Keywords = shiitake

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13 pages, 1674 KiB  
Article
Impact of Substrate Amount and Fruiting Induction Methods in Lentinula edodes Cultivation
by Bruno de Souza Rocha, Wagner Gonçalves Vieira Junior, Adriano Taffarel Camargo de Paula, Asser Botelho Santana, Marcos Antônio da Silva Freitas, Milton Mineo Hirai, Lucas da Silva Alves and Diego Cunha Zied
Horticulturae 2025, 11(8), 915; https://doi.org/10.3390/horticulturae11080915 (registering DOI) - 4 Aug 2025
Abstract
Mushroom production is a sustainable practice but requires improvements, such as in Lentinula edodes (Berk) Pegler cultivation, which has high water and labor demands. In this context, this study proposed replacing the traditional primordia induction method by submersion with a water injection method. [...] Read more.
Mushroom production is a sustainable practice but requires improvements, such as in Lentinula edodes (Berk) Pegler cultivation, which has high water and labor demands. In this context, this study proposed replacing the traditional primordia induction method by submersion with a water injection method. Two primordia induction methods (submersion and injection) and two cultivation block formats were compared: rectangular cube (2 kg) and cylindrical (3.5 kg). The substrate, composed of eucalyptus sawdust (72%), wheat bran (12.5%), rice bran (12.5%), CaCO3 (1%), and CaSO4 (2%), was inoculated with strain LED 19/11 and incubated for 80 days at 26 ± 5 °C and 85 ± 15% humidity. After this period, the blocks were washed and transferred to the production environment. Fruiting was induced either by submersion or water injection, and production was evaluated over four harvest flushes. The 2 kg blocks had higher yields with submersion (16.62%), while the 3.5 kg blocks responded better to injection (13.01%), showing more homogeneous production. Increasing the substrate quantity contributes to greater harvest stability across production cycles. Water injections proved to be a viable alternative, reducing handling and facilitating large-scale production. The use of this technique demonstrates great importance in reducing water use and also the need for labor in cultivation. Full article
(This article belongs to the Section Vegetable Production Systems)
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21 pages, 848 KiB  
Review
Food-Derived Phytochemicals: Multicultural Approaches to Oxidative Stress and Immune Response
by Eiger Gliozheni, Yusuf Salem, Eric Cho, Samuel Wahlstrom, Dane Olbrich, Brandon Shams, Michael Alexander and Hirohito Ichii
Int. J. Mol. Sci. 2025, 26(15), 7316; https://doi.org/10.3390/ijms26157316 - 29 Jul 2025
Viewed by 275
Abstract
This review will focus on how ethnic consumption of foods such as shiitake, ginseng, turmeric, black seeds, berries, rosemary, moringa and holy basil can help act as antioxidants and immune modulators in fighting many diseases. We will investigate how these foods act on [...] Read more.
This review will focus on how ethnic consumption of foods such as shiitake, ginseng, turmeric, black seeds, berries, rosemary, moringa and holy basil can help act as antioxidants and immune modulators in fighting many diseases. We will investigate how these foods act on pathways like Nrf2/Keap1 to increase endogenous antioxidant capacity and help in reducing ROS production, based on publications found in PubMed between 1994 and 2024. In addition, we will show how these plants can cause immune system shifts by changing the makeup of the ratio of Th1/Th2 cells, reduce inflammation, and have antiangiogenic effects on cancer. This review will also show how plants can alter the gut microbiota and lead to a further decrease in oxidative stress. Overall, it will show how plants and their metabolites can potentially create a path forward for creating novel therapeutic approaches and help lead to an improved redox balance, support immune function, and enhance long-term health outcomes. Full article
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14 pages, 4818 KiB  
Article
Utilizing Agrobyproducts: Potential Alternative Substrates for Cultivation of Lentinula edodes
by Zhiguo Zhou, Guohui Cheng, Wenjie Chen, Chunyan Xie, Guisen Hou and Xiaoya An
Fermentation 2025, 11(5), 245; https://doi.org/10.3390/fermentation11050245 - 30 Apr 2025
Viewed by 856
Abstract
This study evaluated six agrobyproducts (oak, jujube, apple, pear, peach, black locust) as alternative substrates for Lentinula edodes cultivation to mitigate oak dependency. Twelve substrate formulations were tested, including individual and mixed sawdust combinations. Results demonstrated successful mycelial colonization across all treatments, with [...] Read more.
This study evaluated six agrobyproducts (oak, jujube, apple, pear, peach, black locust) as alternative substrates for Lentinula edodes cultivation to mitigate oak dependency. Twelve substrate formulations were tested, including individual and mixed sawdust combinations. Results demonstrated successful mycelial colonization across all treatments, with treatment PAS (78% pear sawdust, 20% wheat bran, 1.5% gypsum, and 0.5% lime) exhibiting the fastest mycelial growth (4.70 mm/day) and full colonization in 105 days. Treatment BLS (78% black locust sawdust, 20% wheat bran, 1.5% gypsum, and 0.5% lime) achieved the highest biological efficiency (97.26%) and productivity (0.85 kg/bag). Nutrient analysis revealed substrate-specific enhancements: PAS maximized vitamin C (4.88 mg/100 g) and iron, while PAS + OS (39% peach sawdust, 39% oak sawdust, 20% wheat bran, 1.5% gypsum, and 0.5% lime) elevated protein (3.88%), phosphorus, and zinc. PCA highlighted distinct nutritional profiles for BLS- and jujube-based mushrooms. Correlation analyses identified the third (r = 0.838) and fourth flushes (r = 0.922) as critical for total yield, with selenium and zinc significantly linked to growth rates. Black locust and peach substrates outperformed or complemented oak, offering sustainable alternatives. These findings underscore the potential of agrowaste utilization to reduce ecological strain while maintaining high yields and nutritional quality, aligning with global agricultural sustainability goals. Full article
(This article belongs to the Section Industrial Fermentation)
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11 pages, 1434 KiB  
Article
Development of a Simple HPLC Method for the Analysis of Ergosterol and UV-Enriched Vitamin D₂ in Mushroom Powders
by Judit Bajzát, András Misz, József Rácz, Máté Vágvölgyi, Csaba Csutorás and Csaba Vágvölgyi
Appl. Sci. 2025, 15(7), 4058; https://doi.org/10.3390/app15074058 - 7 Apr 2025
Viewed by 962
Abstract
In this study, a straightforward and cost-effective HPLC-UV method was developed for the rapid determination of vitamin D2 and ergosterol in mushrooms. These bioactive components are known to play a significant role in the nutritional value of mushrooms, particularly in the production [...] Read more.
In this study, a straightforward and cost-effective HPLC-UV method was developed for the rapid determination of vitamin D2 and ergosterol in mushrooms. These bioactive components are known to play a significant role in the nutritional value of mushrooms, particularly in the production of mushroom-based food supplements. The method, designed for routine analysis, involves a simple sample preparation process combining saponification and solid–liquid extraction, followed by HPLC-UV detection. High recovery rates (97–99%) were achieved by the method, with limits of detection (LOD) and quantitation (LOQ) of 0.1 mg/kg dry weight and 0.5 mg/kg dry weight, respectively. The enrichment of vitamin D₂ content in mushroom powders through UV irradiation was also investigated. In Agaricus bisporus, vitamin D₂ levels increased from an initial 1.92 mg/kg to 4.66 mg/kg following heat treatment at 100 °C, and reached a maximum of 28.13 mg/kg when heat treatment was combined with UV irradiation. In contrast, Lentinula edodes exhibited an initial vitamin D₂ content of 7–8.5 mg/kg, with the highest levels achieved through UV treatment alone, which also preserved ergosterol content. These findings highlight species-specific differences in vitamin D₂ conversion and present an effective approach for enhancing the nutritional profile of mushroom-based products, while providing a reliable analytical tool for quality control. Full article
(This article belongs to the Section Chemical and Molecular Sciences)
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19 pages, 644 KiB  
Review
Essential Amino Acids and Fatty Acids in Novel Foods: Emerging Nutritional Sources and Implications
by Lucia Maddaloni, Lorenzo Maria Donini, Laura Gobbi, Luca Muzzioli and Giuliana Vinci
Dietetics 2025, 4(2), 14; https://doi.org/10.3390/dietetics4020014 - 2 Apr 2025
Viewed by 1160
Abstract
Essential amino acids and essential fatty acids are vital nutrients that must be obtained from the diet. However, traditional sources face limitations amid increasing global food security and sustainability challenges. This study aims to evaluate the nutritional potential of novel foods, including microalgae [...] Read more.
Essential amino acids and essential fatty acids are vital nutrients that must be obtained from the diet. However, traditional sources face limitations amid increasing global food security and sustainability challenges. This study aims to evaluate the nutritional potential of novel foods, including microalgae (e.g., spirulina and chlorella), fungi (e.g., oyster and shiitake mushrooms), edible insects (e.g., mealworms and migratory locusts), and unconventional plants (e.g., water lentils and canihua). The study will compare their amino acid and fatty acid profiles with those of conventional animal and plant sources. The comparative analysis conducted in this study reveals that these innovative foods offer balanced and high-quality protein and lipid profiles, and contribute essential nutrients needed to prevent deficiencies and support metabolic health. Significantly, the integration of these novel foods into established dietary patterns, such as the Mediterranean diet, has the potential to enhance nutritional quality while promoting environmental sustainability. In conclusion, the adoption of these innovative food sources provides a viable strategy to meet nutritional demands and address global health and ecological challenges, paving the way toward a more resilient and sustainable food system. Full article
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22 pages, 5942 KiB  
Protocol
Development of an Application Method for Volatile Compounds Derived from Mushroom Fungi Beds as Plant Growth-Promoting Biostimulants
by Clever N. Kanga, Yui Okisaka, Shigeru Hanamata, Daijiro Ueda, Tsutomu Sato, Toshiaki Mitsui and Kimiko Itoh
Methods Protoc. 2025, 8(2), 29; https://doi.org/10.3390/mps8020029 - 7 Mar 2025
Viewed by 2636
Abstract
Volatile compounds (VCs) from fungi can promote plant growth, but their application methods are limited. Edible mushroom fungi beds (FBs) provide a readily available alternative source of fungal VCs, although their biostimulatory functions remain unvalidated. In this study, a novel, non-contact exposure method [...] Read more.
Volatile compounds (VCs) from fungi can promote plant growth, but their application methods are limited. Edible mushroom fungi beds (FBs) provide a readily available alternative source of fungal VCs, although their biostimulatory functions remain unvalidated. In this study, a novel, non-contact exposure method for applying VCs emitted from FBs to rice seedlings was developed. This marks the first evaluation of mushroom FBs as a direct source of bioactive VCs for plant growth promotion. Volatiles from two different edible mushroom FBs promoted shoot growth and increased biomass for rice seedlings. VCs from shiitake FBs significantly increased biomass by 67.4% while VCs from enokitake FBs by 39.5% compared to the control. The biomass-increasing effects were influenced by the quantity of shiitake FBs applied, with significant increases at 15 g, 30 g and 60 g applications. The VCs effects remained significant even when the FBs were covered with two types of gas-permeable polymer film. Chemical analysis of VCs from FBs identified several organic compounds and subsequent bioassays using synthetic VCs determined key bioactive VCs contributing to biomass increase at specific concentrations. This study presents a utilization method of waste mushroom FBs as sustainable, scalable, and cost-effective agricultural biostimulants. Full article
(This article belongs to the Section Biochemical and Chemical Analysis & Synthesis)
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16 pages, 18998 KiB  
Article
Lentinan Alleviated PM2.5 Exposure-Induced Epithelial–Mesenchymal Transition in Pulmonary Epithelial Cells by Inhibiting the GARP/TGF-β/Smad Pathway
by Zhi Wang, Shiqing Xu, Bohao Bian, Zhida Hu, Feiyang Wu, Siqi Zhao, Xiaohui Wang, Li Wang and Teng Ma
Toxics 2025, 13(3), 166; https://doi.org/10.3390/toxics13030166 - 26 Feb 2025
Viewed by 681
Abstract
PM2.5 (fine particulate matter) is an air pollutant widely present in urban and industrial areas, which has emerged as a significant threat to human health. Specifically, long-term exposure to PM2.5 could lead to various lung diseases, including pulmonary fibrosis and Chronic Obstructive Pulmonary [...] Read more.
PM2.5 (fine particulate matter) is an air pollutant widely present in urban and industrial areas, which has emerged as a significant threat to human health. Specifically, long-term exposure to PM2.5 could lead to various lung diseases, including pulmonary fibrosis and Chronic Obstructive Pulmonary Disease (COPD). The Glycoprotein A Repetitions Predominant (GARP) protein, a key receptor and regulator for TGF-β1, has recently emerged as a vital cytokine in PM2.5-induced pulmonary pathological changes. As a membrane glycoprotein, GARP binds to TGF-β, keeping it in an active state. Herein, PM2.5 treatment upregulated GARP and promoted Epithelial–Mesenchymal Transition (EMT) via TGF-β/SMAD signaling pathway activation. Conversely, lentinan (a shiitake mushroom-derived polysaccharide) effectively reversed the PM2.5-induced GARP upregulation, alleviating EMT. This study elucidates the role of GARP in PM2.5-induced EMT through the TGF-β/SMAD pathway in pulmonary epithelial cells and discusses the therapeutic potential of lentinan. Full article
(This article belongs to the Special Issue Health Effects of Exposure to Environmental Pollutants)
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20 pages, 7029 KiB  
Article
Three-Dimensional Reconstruction, Phenotypic Traits Extraction, and Yield Estimation of Shiitake Mushrooms Based on Structure from Motion and Multi-View Stereo
by Xingmei Xu, Jiayuan Li, Jing Zhou, Puyu Feng, Helong Yu and Yuntao Ma
Agriculture 2025, 15(3), 298; https://doi.org/10.3390/agriculture15030298 - 30 Jan 2025
Cited by 2 | Viewed by 1210
Abstract
Phenotypic traits of fungi and their automated extraction are crucial for evaluating genetic diversity, breeding new varieties, and estimating yield. However, research on the high-throughput, rapid, and non-destructive extraction of fungal phenotypic traits using 3D point clouds remains limited. In this study, a [...] Read more.
Phenotypic traits of fungi and their automated extraction are crucial for evaluating genetic diversity, breeding new varieties, and estimating yield. However, research on the high-throughput, rapid, and non-destructive extraction of fungal phenotypic traits using 3D point clouds remains limited. In this study, a smart phone is used to capture multi-view images of shiitake mushrooms (Lentinula edodes) from three different heights and angles, employing the YOLOv8x model to segment the primary image regions. The segmented images were reconstructed in 3D using Structure from Motion (SfM) and Multi-View Stereo (MVS). To automatically segment individual mushroom instances, we developed a CP-PointNet++ network integrated with clustering methods, achieving an overall accuracy (OA) of 97.45% in segmentation. The computed phenotype correlated strongly with manual measurements, yielding R2 > 0.8 and nRMSE < 0.09 for the pileus transverse and longitudinal diameters, R2 = 0.53 and RMSE = 3.26 mm for the pileus height, R2 = 0.79 and nRMSE = 0.12 for stipe diameter, and R2 = 0.65 and RMSE = 4.98 mm for the stipe height. Using these parameters, yield estimation was performed using PLSR, SVR, RF, and GRNN machine learning models, with GRNN demonstrating superior performance (R2 = 0.91). This approach was also adaptable for extracting phenotypic traits of other fungi, providing valuable support for fungal breeding initiatives. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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19 pages, 1108 KiB  
Review
Performance of Mushrooms in Fermented Beverages: A Narrative Review
by Tiziana Di Renzo, Anna Reale, Stefania Nazzaro, Pasquale Marena, Muhamad Hafiz Abd Rahim, Nurul Aqilah Mohd Zaini, Nur ‘Aliah Daud and Wan Abd Al Qadr Imad Wan-Mohtar
Beverages 2025, 11(1), 19; https://doi.org/10.3390/beverages11010019 - 23 Jan 2025
Cited by 1 | Viewed by 3210
Abstract
Mushrooms are indeed gaining attention for their unique therapeutic and nutritional qualities, especially in fermented drinks. This trend builds on their historical use in traditional medicine, especially within Eastern practices, where mushrooms like reishi, chaga, shiitake, oyster, lion’s mane, and cordyceps are known [...] Read more.
Mushrooms are indeed gaining attention for their unique therapeutic and nutritional qualities, especially in fermented drinks. This trend builds on their historical use in traditional medicine, especially within Eastern practices, where mushrooms like reishi, chaga, shiitake, oyster, lion’s mane, and cordyceps are known for their immune-boosting, anti-inflammatory, and adaptogenic properties. This narrative review highlights the growing interest in the use of mushrooms as functional ingredients in fermented beverages, emphasizing their technological and functional advantages. Fermentation significantly enhances the nutritional content and bioavailability of mushrooms, making it an ideal method to maximize the health benefits and sensory appeal of mushroom-based beverages. Microbial activity breaks down complex compounds in mushrooms, making their bioactive components more accessible for absorption; bringing unique flavors, aromas, and textures; and creating a rich-sensory experience while offering potential health benefits. Mushrooms can also improve the stability and shelf life of fermented beverages due to the presence of antimicrobial and antioxidant compounds, adding another valuable benefit to their use in functional beverages. However, despite their potential, further research is needed to fully understand their impact on health and to refine production techniques for optimal quality and consistency. This review provides a comprehensive overview of the current knowledge of mushroom-fermented beverages, highlighting both the known benefits and research gaps that require further investigation. Given the early stage of this field, the review emphasizes the importance of the additional investigation to unlock the full potential of mushrooms in functional beverage applications. Full article
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15 pages, 3259 KiB  
Article
Structure and Activity of β-Oligosaccharides Obtained from Lentinus edodes (Shiitake)
by Wei Jia, Wenhan Wang, Yanzhen Yu, Huimin Wang, Hongtao Zhang, Peng Liu, Meiyan Zhang, Qiaozhen Li, Henan Zhang, Huaxiang Li and Jingsong Zhang
Separations 2024, 11(11), 326; https://doi.org/10.3390/separations11110326 - 14 Nov 2024
Viewed by 922
Abstract
The structure and characteristics of LEOPs, β-oligosaccharides from the fruiting body of Lentinus edodes obtained via acid degradation and gel permeation chromatography, were investigated. We performed high-performance liquid chromatography, infrared spectroscopy, methylation analysis, nuclear magnetic resonance, and correlated activity experiments, including antioxidant, immunomodulatory, [...] Read more.
The structure and characteristics of LEOPs, β-oligosaccharides from the fruiting body of Lentinus edodes obtained via acid degradation and gel permeation chromatography, were investigated. We performed high-performance liquid chromatography, infrared spectroscopy, methylation analysis, nuclear magnetic resonance, and correlated activity experiments, including antioxidant, immunomodulatory, and liver injury protection to gain insights. LEOPs comprised an oligosaccharide (Mw 2445 Da) based on six β-1, 3-D-glucose residues as the main chain and six β-1, 6-D-glucose residues as the side chain. Surface plasmon resonance analysis indicated that LEOPs directly bound to dectin-1, which facilitated their immunoenhancing activity via downstream NF-κB activation. The results implied that LEOPs may be the active unit of the shiitake β-glucan. The determination of LEOPs structure was performed to reveal the anti-tumor effect and immune-regulatory function of shiitake β-glucan on a molecular level to provide a basis. Full article
(This article belongs to the Special Issue Research Progress for Isolation of Plant Active Compounds)
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24 pages, 12102 KiB  
Article
Numerical Study on the Variable-Temperature Drying and Rehydration of Shiitake
by Lizhe Zhang, Long Jiang, Meriem Adnouni, Sheng Li and Xuejun Zhang
Foods 2024, 13(21), 3356; https://doi.org/10.3390/foods13213356 - 23 Oct 2024
Viewed by 1346
Abstract
Variable-temperature convective drying (VTCD) is a promising technology for obtaining high-quality dried mushrooms, particularly when considering rehydration capacity. However, accurate numerical models for variable-temperature convective drying and rehydration of shiitake mushrooms are lacking. This study addresses this gap by employing a model with [...] Read more.
Variable-temperature convective drying (VTCD) is a promising technology for obtaining high-quality dried mushrooms, particularly when considering rehydration capacity. However, accurate numerical models for variable-temperature convective drying and rehydration of shiitake mushrooms are lacking. This study addresses this gap by employing a model with thermo–hydro and mechanical bidirectional coupling to investigate five dehydration characteristics (moisture ratio, drying rate, temperature, evaporation rate, and volume shrinkage ratio) and a drying load characteristic (enthalpy difference) during VTCD. Additionally, a mathematical model combining drying and rehydration is proposed to analyze the effect of VTCD processes on the rehydration performance of shiitake mushrooms. The results demonstrate that, compared to constant-temperature drying, VTCD-dried mushrooms exhibit moderate shrinkage rates and drying time (16.89 h), along with reduced temperature variation and evaporation rate gradient (Max. 1.50 mol/(m3·s)). VTCD also improves enthalpy stability, reducing the maximum drying load by 58.84% compared to 338.15 K constant-temperature drying. Furthermore, drying time at medium temperatures (318.15–328.15 K) greatly influences rehydration performance. This study quantitatively highlights the superiority of variable-temperature convective drying, offering valuable insights for optimizing the shiitake mushroom drying processes. Full article
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21 pages, 4506 KiB  
Article
A Non-Destructive Measurement Approach for the Internal Temperature of Shiitake Mushroom Sticks Based on a Data–Physics Hybrid-Driven Model
by Xin Zhang, Xinwen Zeng, Yibo Wei, Wengang Zheng and Mingfei Wang
Agriculture 2024, 14(10), 1841; https://doi.org/10.3390/agriculture14101841 - 18 Oct 2024
Viewed by 1156
Abstract
This study aimed to develop a non-destructive measurement method utilizing acoustic sensors for the efficient determination of the internal temperature of shiitake mushroom sticks during the cultivation period. In this research, the sound speed, air temperature, and moisture content of the mushroom sticks [...] Read more.
This study aimed to develop a non-destructive measurement method utilizing acoustic sensors for the efficient determination of the internal temperature of shiitake mushroom sticks during the cultivation period. In this research, the sound speed, air temperature, and moisture content of the mushroom sticks were employed as model inputs, while the temperature of the mushroom sticks served as the model output. A data–physics hybrid-driven model for temperature measurement based on XGBoost was constructed by integrating monotonicity constraints between the temperature of the mushroom sticks and sound speed, along with the condition that limited the difference between air temperature and stick temperature to less than 2 °C. The experimental results indicated that the optimal eigenfrequency for applying this model was 850 Hz, the optimal distance between the sound source and the shiitake mushroom sticks was 8.7 cm, and the temperature measurement accuracy was highest when the moisture content of the shiitake mushroom sticks was in the range of 56~66%. Compared to purely data-driven models, our proposed model demonstrated significant improvements in performance; specifically, RMSE, MAE, and MAPE decreased by 74.86%, 77.22%, and 69.30%, respectively, while R2 increased by 1.86%. The introduction of physical knowledge constraints has notably enhanced key performance metrics in machine learning-based acoustic thermometry, facilitating efficient, accurate, rapid, and non-destructive measurements of internal temperatures in shiitake mushroom sticks. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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15 pages, 5553 KiB  
Article
Identification of a Novel Antiviral Lectin against SARS-CoV-2 Omicron Variant from Shiitake-Mushroom-Derived Vesicle-like Nanoparticles
by Joshua Wiggins, Shazeed-Ul Karim, Baolong Liu, Xingzhi Li, You Zhou, Fengwei Bai, Jiujiu Yu and Shi-Hua Xiang
Viruses 2024, 16(10), 1546; https://doi.org/10.3390/v16101546 - 30 Sep 2024
Cited by 3 | Viewed by 2076
Abstract
Lectins are a class of carbohydrate-binding proteins that may have antiviral activity by binding to the glycans on the virion surface to interfere with viral entry. We have identified a novel lectin (named Shictin) from Shiitake mushroom (Lentinula edodes)-derived vesicle-like nanoparticles [...] Read more.
Lectins are a class of carbohydrate-binding proteins that may have antiviral activity by binding to the glycans on the virion surface to interfere with viral entry. We have identified a novel lectin (named Shictin) from Shiitake mushroom (Lentinula edodes)-derived vesicle-like nanoparticles (VLNs, or exosomes) that exhibits strong activity against the SARS-CoV-2 Omicron variant with an IC50 value of 87 nM. Shictin contains 298 amino acids and consists of two unique domains (N-terminal and C-terminal domain). The N-terminal domain is the carbohydrate-binding domain (CBD) that is homologous with CBDs of other lectins, suggesting that Shictin inhibits SARS-CoV-2 infection by binding to the glycans on the virion surface to prevent viral entry. This finding demonstrates that exosomes of vegetables are a valuable source for the identification of antiviral lectins. Therefore, it is believed that lectins from vegetable VLNs have potential as antiviral therapeutic agents. Full article
(This article belongs to the Special Issue Biologics for Emerging and Reemerging Viral Infections)
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16 pages, 1876 KiB  
Article
Machine Learning Models to Classify Shiitake Mushrooms (Lentinula edodes) According to Their Geographical Origin Labeling
by Raquel Rodríguez-Fernández, Ángela Fernández-Gómez, Juan C. Mejuto and Gonzalo Astray
Foods 2024, 13(17), 2656; https://doi.org/10.3390/foods13172656 - 23 Aug 2024
Cited by 1 | Viewed by 1388
Abstract
The shiitake mushroom has gained popularity in the last decade, ranking second in the world for mushrooms consumed, providing consumers with a wide variety of nutritional and healthy benefits. It is often not clear the origin of these mushrooms, so it becomes of [...] Read more.
The shiitake mushroom has gained popularity in the last decade, ranking second in the world for mushrooms consumed, providing consumers with a wide variety of nutritional and healthy benefits. It is often not clear the origin of these mushrooms, so it becomes of great importance to the consumers. In this research, different machine learning algorithms were developed to determine the geographical origin of shiitake mushrooms (Lentinula edodes) consumed in Korea, based on experimental data reported in the literature (δ13C, δ15N, δ18O, δ34S, and origin). Regarding the origin of shiitake in three categories (Korean, Chinese, and mushrooms from Chinese inoculated sawdust blocks), the random forest model presents the highest accuracy value (0.940) and the highest kappa value (0.908) for the validation phase. To determine the origin of shiitake mushrooms in two categories (Korean and Chinese, including mushrooms from Chinese inoculated sawdust blocks in the latter ones), the support vector machine model is chosen as the best model due to the high accuracy (0.988) and kappa (0.975) values for the validation phase. Finally, to determine the origin in two categories (Korean and Chinese, but this time including the mushrooms from Chinese inoculated sawdust blocks in the Korean ones), the best model is the random forest due to its higher accuracy value (0.952) in the validation phase (kappa value of 0.869). The accuracy values in the testing phase for the best selected models are acceptable (between 0.839 and 0.964); therefore, the predictive capacity of the models could be acceptable for their use in real applications. This allows us to affirm that machine learning algorithms would be suitable modeling instruments to determine the geographical origin of shiitake. Full article
(This article belongs to the Section Food Analytical Methods)
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15 pages, 5989 KiB  
Article
Instance Segmentation of Lentinus edodes Images Based on YOLOv5seg-BotNet
by Xingmei Xu, Xiangyu Su, Lei Zhou, Helong Yu and Jian Zhang
Agronomy 2024, 14(8), 1808; https://doi.org/10.3390/agronomy14081808 - 16 Aug 2024
Viewed by 1348
Abstract
The shape and quantity of Lentinus edodes (commonly known as shiitake) fruiting bodies significantly affect their quality and yield. Accurate and rapid segmentation of these fruiting bodies is crucial for quality grading and yield prediction. This study proposed the YOLOv5seg-BotNet, a model for [...] Read more.
The shape and quantity of Lentinus edodes (commonly known as shiitake) fruiting bodies significantly affect their quality and yield. Accurate and rapid segmentation of these fruiting bodies is crucial for quality grading and yield prediction. This study proposed the YOLOv5seg-BotNet, a model for the instance segmentation of Lentinus edodes, to research its application for the mushroom industry. First, the backbone network was replaced with the BoTNet, and the spatial convolutions in the local backbone network were replaced with global self-attention modules to enhance the feature extraction ability. Subsequently, the PANet was adopted to effectively manage and integrate Lentinus edodes images in complex backgrounds at various scales. Finally, the Varifocal Loss function was employed to adjust the weights of different samples, addressing the issues of missed segmentation and mis-segmentation. The enhanced model demonstrated improvements in the precision, recall, Mask_AP, F1-Score, and FPS, achieving 97.58%, 95.74%, 95.90%, 96.65%, and 32.86 frames per second, respectively. These values represented the increases of 2.37%, 4.55%, 4.56%, 3.50%, and 2.61% compared to the original model. The model achieved dual improvements in segmentation accuracy and speed, exhibiting excellent detection and segmentation performance on Lentinus edodes fruiting bodies. This study provided technical fundamentals for future application of image detection and decision-making processes to evaluate mushroom production, including quality grading and intelligent harvesting. Full article
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