Search Results (4,676)

The LOCAL project, ‘Biodiversity and enhancement of local sheep and goat genotypes with a predominant aptitude for milk production’, was developed in the Apulia region of Southern Italy. It adopted a multidisciplinary scientific approach to address the conservation of native sheep and goat breeds, and it aimed to engage a wide and diverse audience to contribute to the development of the territory. This work outlines some of the project’s objectives and, in particular, the activities relating to the historical documentation, census and morphological characteristics of four breeds: the Gentile di Puglia sheep and the Grigia del Subappennino Dauno, Capestrano Pugliese and Antica Murgiana goat breeds. The project’s results enabled the four breeds to be registered in the Regional Register of Animal Genetic Resources, paving the way for further initiatives aimed at implementing in situ and ex situ conservation of the breeds’ genetic heritage. Furthermore, the paper presents actions aimed at raising awareness of the importance of animal biodiversity and native populations, with a particular focus on education, tourism, and productive services. Full article

Sheep farming length of stay in the feedlot directly influences system profitability, mainly due to the high cost of feed. Thus, the use of predictive models based on body measurements is an important tool to define the optimal slaughter point and the ideal feedlot period. Thus, the aim was to evaluate predictive models of meat cuts and tissue carcasses concerning weight at slaughter (WS), loin eye area (LEA), and subcutaneous fat thickness (SFT) obtained by ultrasound of the lumbar region of lambs. The WS and ultrasound measurements were obtained from a pre-slaughter collection of 45 lambs, divided into five groups, each weighing 15, 20, 25, 30, or 35 kg, with nine replications per group. Three regression models were evaluated: WS, LEA, and SFT (independent variables) and the cuts yield or tissue composition (dependent variable). Increasing WS resulted in greater carcass weight and commercial cuts. Above 15 kg body weight, bone weight showed little or no increase (allometric coefficient = 0.06), whereas muscle and fat tissues increased steadily, with allometric coefficients of 0.25 and 0.12, respectively. The commercial cuts showed a high and significant correlation with WS and LEA. The muscle and bone proportion of the leg had a significant (p < 0.10) correlation with SFT. For the weight of commercial cuts estimates, the inclusion of LEA and/or SFT with WS did not improve the coefficient of determination but made the predictions equivalent to the measured values. There were high determination coefficients when WS was only used to predict muscle, fat, and bone weight, but it was not efficient in predicting the muscle/fat and muscle/bone ratios and the percentage of tissues. The WS was the variable that best explained the weight and tissue content. The inclusion of LEA and/or SFT made little improvement to the predictive models. Full article

The reference genome serves as a fundamental resource for sheep genetic research and molecular breeding, and iterative improvements in assembly quality have directly driven advances in these fields. A systematic literature review was conducted by retrieving relevant studies from major scientific databases using predefined keywords related to sheep reference genomes and genome assembly technologies, followed by structured screening and comparative analysis of eligible publications. This review systematically summarizes the developmental trajectory of the sheep reference genome from early fragmented assemblies to telomere-to-telomere (T2T) genome assembly approaches. Different genome versions are comparatively analyzed from multiple perspectives, including assembly strategies, quality metrics, and functional annotation. Importantly, we propose a genome-resolution-driven analytical framework that explicitly links successive improvements in reference genome completeness with paradigm shifts in sheep genetic analysis, ranging from marker-based studies to structural variation- and multi-omics-enabled trait dissection. Particular emphasis is placed on the potential applications and biological research value of T2T genomes in assembly methodologies and multi-omics integrative analyses. Furthermore, the practical significance of different reference genome versions in genetic dissection, trait mapping, and breeding applications is reviewed, and future directions for sheep genome research are discussed. This review provides both a systematic synthesis and a forward-looking conceptual roadmap for advancing sheep molecular genetics and precision breeding in the T2T genomics era. Full article

This study investigates the typology of the pastoral farming systems in the arid region of southern Tunisia, with a particular focus on the governorate of Tataouine. A field survey was conducted among 111 livestock farmers distributed across different agro-ecological zones. The typology of breeding systems was established using a Factor Analysis of Mixed Data (FAMD), which identified eleven dimensions explaining 69.74% of the total data variance. The first three dimensions accounted for 15.91%, 8.79%, and 7.67% of the variability, respectively, and were defined by herd composition, resource availability, and management strategies, including variables such as the number of goats, sheep, and camels, distance to water sources, infrastructure, reproductive practices, and workforce availability. Hierarchical clustering revealed three distinct systems: System 1, regrouping “Small Urban Farmers”, defined by small-scale operations relying on family labor, localized feed resources, and market-driven production targeting urban consumers; System 2, representing large livestock, composed of professionalized operations with improved infrastructure, hired labor, and transhumance practices to optimize resource use and productivity; and System 3, for herds with camels, characterized by extensive systems utilizing collective rangelands and camels to adapt to arid conditions and ensure ecological resilience. The results emphasize how ecological constraints, infrastructure, and spatial organization shape the diversity of these systems. This typology provides critical insights into the challenges and potential of livestock farming in arid environments and offers a foundation for designing targeted interventions to support the sustainability of pastoral systems under increasing environmental and economic pressures. Full article

This study investigates the mechanisms underlying drought adaptability in Duolang sheep, a local breed from two distinct habitats in Xinjiang—an arid southern region and a grassland northern region—aiming to identify key factors driving differential environmental adaptation. Integrated multi-omics analyses were performed, including serum biochemical assays, untargeted metabolomics of perirenal and tail fat tissues, and transcriptomic profiling of lung, liver, and kidney samples. Our results revealed notable differences: (1) serum levels of GSH-Px, IL-2, and IgG were significantly higher in the southern group (p < 0.01); (2) metabolomic analysis identified key differential metabolites, including EPA (involved in unsaturated fatty acid biosynthesis), choline (glycerophospholipid metabolism), L-serine and glutathione (cofactor biosynthesis), and taurine (sulfur metabolism); and (3) transcriptomic analysis revealed significant differential expression of genes such as FGF21 (thermogenesis), CD14 and DUSP2 (MAPK signaling pathway), GOT1 (arginine biosynthesis), and AVPR2 (vasopressin-regulated water reabsorption). Integrative correlation analysis further indicated that glutathione, EPA, GOT1, and CD14 are involved in energy and lipid metabolism, while taurine, AVPR2, and DUSP2 contribute to oxidative stress resistance and immune regulation. These molecular and metabolic adjustments collectively enhance drought adaptability in southern Xinjiang Duolang sheep. In conclusion, adaptation to arid environments requires enhanced antioxidant capacity and immune function, with metabolites such as EPA supporting lipid metabolism and genes such as FGF21 regulating fatty acid oxidation to limit triglyceride accumulation. Full article

Listeria monocytogenes (Lm) is a foodborne pathogen whose virulence depends on the coordinated action of multiple virulence factors. Although deletion of either LIPI-4 or inlB reduces the virulence of Listeria monocytogenes, it remains unknown whether these two factors are functionally or regulatory connected. Therefore, we constructed an inlB deletion mutant and its complemented strain in the Lm928 and ΔLIPI-4 backgrounds. We assessed bacterial growth, biofilm formation, motility, host cell interactions (adhesion, invasion, intracellular proliferation), plaque formation, mouse organ colonization. Growth curve analysis showed no significant differences among strains. qPCR revealed that LIPI-4 modulates inlB expression in a cell-type-specific manner: inlB was downregulated in ΔLIPI-4 under culture and HTR-8 infection, but upregulated during hCMEC/D3 infection—yet functional defects persisted in all cases. Biofilm assays showed that ΔLIPI-4 and the double mutant exhibited enhanced biofilm formation, with the double mutant exceeding ΔLIPI-4, demonstrating synergistic enhancement. Motility assays indicated that LIPI-4 dominates bacterial movement, with ΔLIPI-4 and the double mutant showing identical severe defects. Plaque formation analysis showed that LIPI-4 is essential for cell-to-cell spread, while inlB deletion unexpectedly enhanced plaque formation—an effect completely abolished in the absence of LIPI-4. Host cell assays across Caco-2, HTR-8, and hCMEC/D3 models revealed that LIPI-4 is the core determinant of adhesion, invasion, and intracellular proliferation, whereas inlB contributes in the context of LIPI-4 and its effects vary with the specific cellular process examined. In mice, LIPI-4 was essential for systemic colonization of the liver and spleen, with inlB acting as a co-factor, whereas inlB unexpectedly promoted higher bacterial burdens in the brain, suggesting that inlB modulates LIPI-4-mediated neuroinvasion. Overall, our results establish LIPI-4 as the central determinant of Lm virulence, with inlB acting as a context-dependent co-factor that modulates LIPI-4-mediated pathogenesis in a cell type- and tissue-specific manner. Full article

The Huang-huai sheep (Dorper × Small-tailed Han), certified in China in 2019, initially exhibited issues with genetic uniformity and meat quality. A six-year (2020–2025) breeding program was conducted at two core farms (collectively housing ~2400 breeding ewes representing 12 bloodlines) using the custom “Yuyang Muxin” 10 K SNP chip containing functional markers for reproduction (FecB), growth (CLPG, ACTC1), and meat quality (FABP3, CIDEa). Genotyping and marker-assisted selection were integrated with BLUP breeding values. After six years, favorable FecB genotype frequency increased from 68.97% to 82.58% (p < 0.05), while genetic diversity remained stable (F_IS < 0.05). Mixed model analysis accounting for farm and year random effects revealed significant genetic gains: 6-month ram body weight increased by 9.1% (58.50 to 63.80 kg, p < 0.05), dressing percentage improved from 56.02% to 57.8% (p < 0.05), and loin muscle area expanded by 9.4% (24.50 to 26.8 cm², p < 0.05). Meat quality was enhanced, with shear force decreasing by 14.1% (38.65 to 33.20 N, p < 0.05) and intramuscular fat increasing by 40.0% (2.0% to 2.8%, p < 0.05). Lambs weaned per ewe per year increased from 2.38 to 2.56 (p < 0.05). EBV trend analysis confirmed that improvements were primarily genetic. After Bonferroni correction, CIDEa expression was strongly correlated with intramuscular fat (r = 0.89, p < 0.001) and FABP3 expression with arachidonic acid (r = 0.70, p < 0.001). Nine months was identified as the optimal slaughter age. The “Yuyang Muxin” breeding chip effectively accelerated genetic improvement in Huang-huai sheep, enabling synergistic enhancement of multiple traits. Full article

Natural pasture, the primary feed source in sheep production, often provides insufficient levels of essential minerals and vitamins required for proper metabolic regulation during pregnancy and early development. This study aimed to analyze patent developments of mineral and vitamin complexes (MVCs) for pregnant ewes and lambs and to evaluate the biochemical and molecular relevance of their components based on scientific evidence. A search of the World Intellectual Property Organization (WIPO) database using the keywords “vitamins for sheep” and “minerals for sheep” identified 120 patents related to sheep feed additives, including 23 specifically formulated for pregnant ewes and lambs. Comparative analysis revealed that calcium, selenium, iron, copper, cobalt, sodium, manganese, zinc, and vitamins A, D, and E were the most frequently included components. These micronutrients play critical roles in enzymatic activity, regulation of gene expression, antioxidant defense systems, and mineral homeostasis. In particular, zinc and selenium function as structural and catalytic cofactors for antioxidant enzymes such as superoxide dismutase and glutathione peroxidase, while vitamins A and D regulate cellular differentiation and calcium–phosphorus metabolism through transcriptional control mechanisms. Additionally, functional additives, including amino acids and plant-derived bioactive compounds, contribute to improved mineral bioavailability and modulation of metabolic pathways. The analyzed formulations demonstrate a consistent focus on correcting mineral deficiencies, enhancing antioxidant protection, and supporting metabolic adaptation during pregnancy and early postnatal development. Overall, the findings indicate that modern MVCs are rationally formulated to improve mineral utilization, physiological stability, and reproductive outcomes, highlighting their critical role in optimizing maternal health and offspring viability in sheep production systems. Full article

Crop residues can harbor pathogens, making winter sanitation essential for sustainable viticulture. The grass–sheep–grape system could improve vineyard health through microbial optimization. To evaluate this, we assessed the effects of sheep feeding on fallen leaves on the occurrence of grape diseases through greenhouse experiments and used high-throughput-sequencing to compare microbial communities in grape fallen leaves and sheep feces, aiming to determine whether winter grazing reduces residue-borne pathogens. The results revealed that sheep grazing in vineyards significantly reduces the occurrence of grape leaf and cluster diseases, as well as a fundamental difference in microbial structures between leaves and feces, with no fungal taxa detected in the feces. The number of shared bacterial OTUs was minimal, while feces contained significantly more unique bacterial OTUs than fallen leaves. Additionally, bacterial diversity was significantly higher in feces than in fallen leaves. Sheep feces harbored a substantial number of highly efficient cellulose-degrading anaerobic bacteria, which may enhance organic matter conversion efficiency, and promote nutrient cycling in vineyards. Moreover, the grazing process directly reduced several pathogenic fungi associated with grape leaf, fruit, and root diseases. Functional analysis further indicated that fecal bacterial communities were primarily enriched in core metabolic and genetic processing functions, while leaf microbes were more involved in microbial interactions and secondary metabolism. More importantly, no function guilds of plant pathogenic fungi were present in feces. Overall, winter sheep grazing in vineyards can remove fallen leaves, not only reducing the risk of pathogen transmission but also potentially introducing beneficial bacterial communities. This study provides a feasible strategy for organic vineyard management in winter, and offers important insights for promoting sustainable vineyard production. Full article

Oxidative stress (OS) is a central regulator of health and productivity in livestock, emerging from complex interactions between dietary inputs, microbiome composition, environmental stressors, and host metabolism. This narrative review synthesizes current knowledge on OS in cattle, pigs, sheep, and poultry, emphasizing mechanistic pathways, tissue-specific responses, and translational applications. We highlight the central role of redox–inflammatory signaling hubs, including nuclear factor kappa B (NF-κB), nuclear factor erythroid 2–related factor 2 (Nrf2)/Kelch-like ECH-associated protein 1 (Keap1), and inflammasomes, as integrators of metabolic and immune stress. Microbiome–metabolome interactions modulate systemic oxidative responses, influencing liver, mammary gland, gastrointestinal tract, adipose tissue, and reproductive tissues. Oxidative stress-related biochemical and molecular alterations are captured by a range of biomarkers, such as malondialdehyde (MDA), Total Antioxidant Capacity (TOAC), gluthatione peroxidase (GPx), superoxide dismutase (SOD), paraoxonase-1 (PON1), cytokines, and gene expression profiles, measurable in blood, milk, saliva, and tissues. Integrating these markers enables precision diagnostics, early disease detection, and evidence-based nutritional interventions. Furthermore, computational modeling and spatial–socioeconomic perspectives offer novel approaches to translate molecular redox insights into practical livestock management strategies. By framing OS as a regulated, context-dependent process rather than a simple imbalance of reactive oxygen species, this review advances a conceptual, cross-species framework for understanding, monitoring, and mitigating oxidative stress in livestock. This integrative perspective provides a foundation for targeted antioxidant strategies and sustainable production practices, bridging molecular mechanisms with practical applications in animal health and productivity. Full article

In this study, we investigated the genomic basis of key body measurement and weight traits in Iraqi Awassi sheep using a multi-locus genome-wide association approach. A total of 315 yearling animals were phenotyped for body length, chest depth, heart girth, withers height, and body weight, and genotyped using the Ovine 50K SNP BeadChip. Genome-wide association analyses were performed within the BLUPmrMLM framework to improve the detection of loci with moderate-to-small effects. Significant associations were identified using an LOD-based threshold (LOD ≥ 5), followed by positional annotation of nearby genes and functional enrichment analyses to infer their potential biological relevance. Multiple genomic regions were associated with the evaluated traits. Among the most biologically plausible candidate genes were DST and CFAP299 for body length, ADAMTS8 for chest depth, ZFPM1 and OST4 for heart girth, CPEB2 for body weight, and ITGBL1, RBMS3, and THSD7B for withers height. Functional enrichment analyses indicated the involvement of pathways related to integrin-mediated signaling, focal adhesion and integrin complexes, extracellular matrix organization, and post-transcriptional regulation, suggesting coordinated effects of cell–matrix interactions and gene-expression regulation on body size and conformation. Overall, these findings refine the genomic landscape underlying body weight and morphometric variation in Awassi sheep and provide a focused set of loci for future validation and possible application in marker-assisted and genomic selection programs. Full article

Biochar and plant growth-promoting rhizobacteria (PGPR) are promising for coastal saline–alkali soil remediation, but their combined effect is often limited by nutrient scarcity. This study investigated whether nutrient-laden biochar (saturated with livestock wastewater) synergizes with a PGPR inoculant (Paenibacillus mucilaginosus PM12) to enhance maize productivity by reshaping the rhizosphere microbiome. A field experiment included five treatments: control (CK), sheep manure biochar alone (BC), nutrient-laden biochar (NBC), BC + PGPR (MBC), and NBC + PGPR (MNBC). The MNBC treatment showed the most pronounced improvements, increasing maize yield by 52.5% compared to CK, while reducing soil pH by 0.30 units and enhancing soil organic matter, total nitrogen, and available phosphorus. Metagenomic analysis revealed that MNBC uniquely enriched beneficial genera (e.g., Nocardioides) and saprotrophic Basidiomycota, while suppressing pathogenic Fusarium. This restructuring elevated the genetic potential for nitrogen transformation, phosphorus solubilization, and carbon metabolism. Structural equation modeling identified increased soil available phosphorus and total nitrogen as the primary direct drivers of yield enhancement. The integration of nutrient-laden biochar and PGPR creates a synergistic system that reclaims saline–alkali soil by alleviating stress, supplying nutrients, and directing the assembly of a functional microbiome. Full article

Goats are important livestock species in most rural households and were amongst the first species to be domesticated. Despite this, their production is based on extensive systems, exposing them to numerous challenges affecting their productivity. This review examines the applications of precision livestock farming (PLF) and AI-driven technologies in goat management, focusing on their impacts on productivity, welfare, genetic potential, health monitoring, feeding efficiency and sustainability outcomes and identifying challenges for their adoption in smallholder and extensive systems. Unlike previous reviews that focus mainly on cattle raised under intensive systems, this review synthesizes their use in goat production and highlights technological, socio-economic and infrastructural constraints. A conventional literature review approach is used, with studies retrieved from major databases using relevant keywords. The selected studies are evaluated to assess technological applications, benefits and adoption challenges, followed by a SWOT analysis. Engineering aspects of precision livestock farming—including sensors, data connectivity, system integration, automation and scalability—are also discussed. Ideally, these technologies operate as integrated decision-support systems that jointly improve productivity, animal welfare and sustainability, rather than performing isolated tasks. However, many PLF solutions remain at low technology-readiness levels and are constrained by infrastructure gaps, sensor reliability and compatibility issues, which collectively limit adoption in smallholder systems. Future research should focus on the development of cost-effective, reliable PLF systems for smallholder producers, while policy and capacity-building initiatives are needed to enhance infrastructure, training and technology adoption for scalable implementation. Full article

This review provides a comparative examination of current methods for evaluating fertility and semen quality in mammals, with emphasis on livestock species. It is based on a structured search and analysis of 316 academic publications retrieved from major scientific databases, including Elsevier, Springer, Taylor & Francis, and MDPI, as well as other repositories, covering literature published between 1938 and 2025. This review examines advanced semen analysis techniques, including computer-assisted semen analysis (CASA) systems and assays for assessing chromatin integrity, DNA damage, seminal plasma composition, sperm membrane proteins, and functional parameters such as migration capacity, membrane integrity, acrosomal status, capacitation, morphology, viability, concentration, motility, and volume. Methods for semen collection are also outlined. The synthesis focuses on the comparative assessment of techniques and recent findings for major ruminant and monogastric livestock species: cattle (Bos taurus and Bos indicus), buffalo (Bubalus bubalis), sheep (Ovis aries), goats (Capra hircus), and pigs (Sus domesticus). A brief historical overview of assisted insemination is presented, incorporating relevant procedures and managerial factors that affect fertility outcomes. Advances in genetics related to reproductive health are also discussed. This synthesis seeks to integrate existing knowledge and guide future research in reproductive science for both animal production and human medicine. Full article

Aim: Static guided computer-assisted apicoectomy has been shown to improve the precision of periapical surgery; however, limited data are available regarding its performance and accuracy in hard bone conditions. The primary aim of this study was to collect data on how this technique functions in hard bone and to evaluate the accuracy of different guided approaches under these conditions. Specifically, the accuracy of three surgical instruments—a commercially available bone drill, a bone trephine (partially guided), and an endo-trephine with a stopper (fully guided)—was compared in hard bone. Materials and methods: Sheep mandibles were scanned using cone-beam computed tomography (CBCT) and an intraoral scanner (STL). Digital planning was performed using commercially available dental implant surgical planning software. Guided apicoectomy procedures were carried out with the aid of 3D-printed surgical guides. Following the interventions, matching metal cylinders were inserted into the prepared osteotomies, and post-operative CBCT scans were acquired. Apical deviation from the digitally planned endpoint and angular deviation were analyzed to assess accuracy in hard bone. Results: The drill demonstrated a statistically significantly higher apical deviation compared to the endo-stop trephine (p < 0.001). No statistically significant difference in apical deviation was found between the bone trephine and the endo-stop trephine. Additionally, no significant differences were observed among the three approaches in the mesiodistal (x) and buccolingual (y) directions or in angular deviation; however, a statistically significant difference was detected in the vertical (z) dimension. Conclusions: Within the limitations of this study, static guided apicoectomy proved to be a reliable technique in hard bone conditions. The fully guided trephine approach demonstrated the highest drilling accuracy, while partially guided trephination and drilling showed greater deviations. These findings provide valuable data on the behavior and precision of different endosurgical guided instruments in hard bone and support the use of fully guided systems when high accuracy is required. Full article