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Search Results (185)

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Keywords = respirable fraction

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17 pages, 3246 KiB  
Article
Rosemary Extract Reduces Odor in Cats Through Nitrogen and Sulfur Metabolism by Gut Microbiota–Host Co-Modulation
by Ziming Huang, Miao Li, Zhiqin He, Xiliang Yan, Yinbao Wu, Peiqiang Mu, Jun Jiang, Xu Wang and Yan Wang
Animals 2025, 15(14), 2101; https://doi.org/10.3390/ani15142101 - 16 Jul 2025
Viewed by 685
Abstract
Odors from pet cats can negatively affect the quality of life of cat owners. The diverse bioactive compounds in plant extracts make them a promising candidate for effective odor reduction. This study evaluated twelve plant extracts for deodorizing efficacy via in vitro fermentation [...] Read more.
Odors from pet cats can negatively affect the quality of life of cat owners. The diverse bioactive compounds in plant extracts make them a promising candidate for effective odor reduction. This study evaluated twelve plant extracts for deodorizing efficacy via in vitro fermentation tests. Rosemary extract and licorice extract exhibited better deodorizing effects, with fractions of rosemary extract below 100 Da demonstrating the most effective deodorizing performance. Based on these findings, subsequent feeding trials were conducted using rosemary extract and its fractions below 100 Da. In the feeding trial, adult British Shorthair cats were divided into three groups (Control Check, RE, and RE100) and housed in a controlled-environment respiration chamber for 30 days. Measurements included odor emissions, fecal and blood physicochemical parameters, immune parameters, microbiota composition based on 16S rRNA sequencing, and metabolome analysis. The results of the feeding trial indicated that rosemary extract significantly reduced ammonia and hydrogen sulfide emissions (46.84%, 41.64%), while fractions below 100 Da of rosemary extract achieved even greater reductions (55.62%, 53.87%). Rosemary extract regulated the intestinal microbial community, significantly increasing the relative abundance of the intestinal probiotic Bifidobacterium (p < 0.05) and reducing the population of sulfate-reducing bacteria (p < 0.05). It also significantly reduced urease and uricase activities (p < 0.05) to reduce ammonia production and inhibited the degradation of sulfur-containing proteins and sulfate reduction to reduce hydrogen sulfide emissions. Furthermore, rosemary extract significantly enhanced the immune function of British Shorthair cats (p < 0.05). This study suggests that rosemary extract, particularly its fractions below 100 Da, is a highly promising pet deodorizer. Full article
(This article belongs to the Section Companion Animals)
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8 pages, 830 KiB  
Communication
Differential N2O-Producing Activity of Soil Fungi Across Agricultural Systems: High in Vegetable Fields and Vineyards, Low in Paddies
by Shutan Ma, Jintao Zhang, Ting Wu, Yuqing Miao, Hua Fang, Haitao Wang, Huayuan Niu and Lan Ma
Nitrogen 2025, 6(3), 57; https://doi.org/10.3390/nitrogen6030057 - 11 Jul 2025
Viewed by 203
Abstract
The substrate-induced respiration-inhibition (SIRIN) method has been used to estimate fungi-derived N2O emissions, but its contribution to soil N2O emissions remains unclear. There is a need to quantify the fungal fraction of N2O production more precisely. Here, [...] Read more.
The substrate-induced respiration-inhibition (SIRIN) method has been used to estimate fungi-derived N2O emissions, but its contribution to soil N2O emissions remains unclear. There is a need to quantify the fungal fraction of N2O production more precisely. Here, using isotopocule analysis, we assessed the relative contribution of fungi to soil N2O production potential under denitrifying conditions, where key limiting factors of denitrification (soil moisture, soil NO3, and electron donor) were removed. The result showed that the ratio of fungi-derived N2O emissions (RF) was 0.83~4.28% in paddy soils, 13.80~23.21% in vineyard soils, and 15.34~65.94% in vegetable field soils, respectively. This indicated that the bacteria were the dominator of soil N2O production potential in most cases, but fungal pathways could be significant in vegetable field soils. The experiment with bactericide addition showed that inhibitors could affect non-target microorganisms in the SIRIN method. Our further analyses suggest that it is worth to explore the effect of soil organic carbon and microbial synergies on fungi-derived N2O emissions. Full article
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21 pages, 2631 KiB  
Article
Characterization of a Periplasmic D-Malate:Cytochrome c Oxidoreductase from Ectopseudomonas oleovorans CECT 5344 and Its Role in Extracytoplasmic Respiration and Cyanide Detoxification
by Faustino Merchán, Ana G. Población, María Isabel Guijo, Mar Gómez-Ortega, Felipe Morales-Durán, Irene Alonso-Ríos, Rubén Sánchez-Clemente and Rafael Blasco
Int. J. Mol. Sci. 2025, 26(14), 6575; https://doi.org/10.3390/ijms26146575 - 8 Jul 2025
Viewed by 292
Abstract
A periplasmic D-malate:cytochrome c oxidoreductase (DMCO) was identified in Ectopseudomonas oleovorans CECT5344, utilizing 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyl tetrazolium chloride (INT) as an artificial electron acceptor. The assay was adapted for a spectrophotometric or native polyacrylamide gel electrophoresis (PAGE) analysis. The DMCO-encoding gene (BN5_4044) was cloned and [...] Read more.
A periplasmic D-malate:cytochrome c oxidoreductase (DMCO) was identified in Ectopseudomonas oleovorans CECT5344, utilizing 2-(4-iodophenyl)-3-(4-nitrophenyl)-5-phenyl tetrazolium chloride (INT) as an artificial electron acceptor. The assay was adapted for a spectrophotometric or native polyacrylamide gel electrophoresis (PAGE) analysis. The DMCO-encoding gene (BN5_4044) was cloned and expressed in Escherichia coli, enabling a partial purification and biochemical characterization. In addition to D-malate, the enzyme oxidizes D-2-hydroxyglutarate and, to a lesser extent, D-lactate, with cytochrome c also serving as an electron acceptor. DMCO requires Zn2+ for activity and exists as a dimer, as determined by gel filtration. The in vitro reconstitution of the electron transfer from D-malate to oxygen was achieved using spheroplasts, enriched periplasmic fractions, and cytochrome c. This extracytoplasmic respiration, unique among homologs of this protein, may eliminate the need for a dedicated inner membrane transporter, thereby avoiding potential upstream respiratory bottlenecks. In the context of bioremediation, and particularly regarding the cyanide metabolism, this D-malate oxidation to oxaloacetate facilitates detoxification by forming the corresponding cyanohydrin, which can be subsequently assimilated for growth. Full article
(This article belongs to the Special Issue Current Advances and Perspectives in Microbial Genetics and Genomics)
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17 pages, 22603 KiB  
Article
High-Fat Diet-Induced Diabetic Cardiomyopathy in Female Zebrafish: Cardiac Pathology and Functional Decline Mediated by Type 2 Diabetes
by Shuaiwang Huang, Zhanglin Chen, Haoming Li, Yunyi Zou, Bihan Wang, Wenjun Zhao, Lan Zheng, Zuoqiong Zhou, Xiyang Peng and Changfa Tang
Nutrients 2025, 17(13), 2209; https://doi.org/10.3390/nu17132209 - 2 Jul 2025
Viewed by 531
Abstract
Background: Diabetic cardiomyopathy (DCM) is characterized by progressive cardiac dysfunction, metabolic dysregulation, myocardial fibrosis, and mitochondrial impairment. Existing animal models, such as streptozotocin (STZ)-induced models, suffer from high mortality and fail to replicate chronic metabolic dysregulation induced by high-fat diets (HFD), whereas HFD [...] Read more.
Background: Diabetic cardiomyopathy (DCM) is characterized by progressive cardiac dysfunction, metabolic dysregulation, myocardial fibrosis, and mitochondrial impairment. Existing animal models, such as streptozotocin (STZ)-induced models, suffer from high mortality and fail to replicate chronic metabolic dysregulation induced by high-fat diets (HFD), whereas HFD or HFD/STZ-combined rodent models require high maintenance costs. This study aimed to establish a zebrafish HFD-DCM model to facilitate mechanistic exploration and drug discovery. Methods: Eighty wild-type female zebrafish were divided into normal diet (N, 6% fat) and HFD (H, 24% fat) groups and fed the diet for 8 weeks. Metabolic phenotypes were evaluated using intraperitoneal glucose tolerance tests and insulin level analysis. Cardiac function was assessed by using echocardiography (ejection fraction, E peak). Structural, metabolic, and oxidative stress alterations were analyzed by histopathology (H&E, Masson, and Oil Red O staining), molecular assays (RT-qPCR, Western blotting), and mitochondrial structure/function evaluations (respiratory chain activity, transmission electron microscopy, and DHE staining). Results: HFD-fed zebrafish developed obesity, insulin resistance, and impaired glucose tolerance. Echocardiography revealed cardiac hypertrophy, reduced ejection fraction, and diastolic dysfunction. Excessive lipid accumulation, upregulated fibrosis/inflammatory markers, impaired mitochondrial respiration, elevated reactive oxygen species levels, and a disrupted redox balance were observed. Conclusions: We established a female zebrafish HFD model that recapitulates human DCM features, including hypertrophy, metabolic dysregulation, fibrosis, inflammation, and mitochondrial dysfunction. This model offers novel insights into DCM pathogenesis and serves as a valuable platform for mechanistic studies and targeted drug screening. Full article
(This article belongs to the Special Issue The Diabetes Diet: Making a Healthy Eating Plan)
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12 pages, 602 KiB  
Article
Effects of SGLT2 Inhibitors on Sleep Apnea Parameters and Cheyne–Stokes Respiration in Patients with Acute Decompensated Heart Failure: A Prospective Cohort Study
by Petar Kalaydzhiev, Tsvetelina Velikova, Yanitsa Davidkova, Gergana Voynova, Angelina Borizanova, Natalia Spasova, Neli Georgieva, Radostina Ilieva, Elena Kinova and Assen Goudev
Biomedicines 2025, 13(6), 1474; https://doi.org/10.3390/biomedicines13061474 - 14 Jun 2025
Viewed by 642
Abstract
Background: Sleep-disordered breathing (SDB), particularly Cheyne–Stokes respiration (CSR), is highly prevalent among patients hospitalized with acute decompensated heart failure (ADHF) and is associated with worse clinical outcomes. Sodium-glucose cotransporter-2 inhibitors (SGLT2i) have demonstrated cardiorenal benefits in heart failure, but their effects on nocturnal [...] Read more.
Background: Sleep-disordered breathing (SDB), particularly Cheyne–Stokes respiration (CSR), is highly prevalent among patients hospitalized with acute decompensated heart failure (ADHF) and is associated with worse clinical outcomes. Sodium-glucose cotransporter-2 inhibitors (SGLT2i) have demonstrated cardiorenal benefits in heart failure, but their effects on nocturnal respiratory parameters remain underexplored. Objectives: This study aims to evaluate the impact of SGLT2i therapy on key respiratory and cardiac indices including CSR burden, oxygenation, and right heart function in patients with ADHF and reduced left ventricular ejection fraction. Methods: In this single-center prospective cohort study, 60 patients with ADHF, LVEF < 40%, and a baseline apnea–hypopnea index (AHI) > 5 were assessed before and three months after the initiation of SGLT2i therapy. Sleep respiratory parameters were measured using home polygraphy (ApneaLinkTM), while cardiac and renal indices were evaluated by echocardiography, NT-proBNP, and the estimated glomerular filtration rate (eGFR). Structural and functional echocardiographic changes were analyzed both at baseline and following the 3-month treatment period. Patient-reported outcomes were assessed using the Epworth Sleepiness Scale (ESS) and Kansas City Cardiomyopathy Questionnaire (KCCQ). Results: After 3 months of SGLT2i therapy, significant improvements were observed in daytime sleepiness (ESS: −2.68 points; p < 0.001), CSR index (−5.63 events/h; p < 0.001), AHI (−3.07 events/h; p < 0.001), ODI (−6.11 events/h; p < 0.001), and mean nocturnal SpO2 (+1.95%; p < 0.001). KCCQ scores increased by 9.16 points (p < 0.001), indicating improved quality of life. Cardiac assessments revealed reductions in NT-proBNP (−329.6 pg/mL; p < 0.001) and E/e′ ratio (−1.08; p < 0.001), with no significant change in LVEF or chamber dimensions. Right ventricular function improved, as evidenced by the increased TAPSE/sPAP ratio (+0.018; p < 0.001). Renal function remained stable, with a non-significant upward trend in eGFR. Conclusions: This exploratory study suggests that SGLT2 inhibitors may be associated with the attenuation of Cheyne–Stokes respiration and an improvement in right heart function in patients with ADHF, warranting further investigation in controlled trials. These findings highlight the potential of SGLT2is to address overlapping cardio-respiratory dysfunction in this high-risk population. Full article
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27 pages, 5053 KiB  
Article
Microbially Mediated Carbon Regulation by Straw Mulching in Rainfed Maize Rhizosphere
by Lei Pang, Haimei Wu, Jianlong Lu, Haofei Zheng, Xiaohua Wang, Muhammad Zahid Mumtaz and Yanli Zhou
Agronomy 2025, 15(6), 1412; https://doi.org/10.3390/agronomy15061412 - 8 Jun 2025
Viewed by 501
Abstract
Soil carbon dynamics and microbial communities are critical to soil health. However, the specific effects of mulching on soil microbial community and carbon dynamics in semi-arid rainfed regions remain insufficiently understood. This study aims to identify optimal mulching practices that promote soil carbon [...] Read more.
Soil carbon dynamics and microbial communities are critical to soil health. However, the specific effects of mulching on soil microbial community and carbon dynamics in semi-arid rainfed regions remain insufficiently understood. This study aims to identify optimal mulching practices that promote soil carbon sequestration and enhance soil microbial functionality. Mulching treatments were applied in furrows before maize sowing, including black plastic film (TB), white plastic film (TW), straw mulching without sowing (TC), and straw mulching with sowing (TG), and were compared with flat sowing without mulching (TN). Results revealed that TG treatment promoted soil carbon dynamics by increasing total carbon (9%), organic carbon (19%), microbial biomass carbon (100%), easily oxidized carbon (10%), particulate-associated carbon (77%), carbon stability index (7%), active carbon fraction (45%), dissolved carbon proportion (30%), and microbial quotient (34%) compared to TN. A higher abundance and composition of bacterial communities were observed compared to fungal communities. The highest bacterial abundance of Kaistobacter, iii1_15, Sinobacteraceae, and Xanthomonadaceae, and fungal abundance of unspecified fungi, Laiosphaeriaceae, and Sordariomycetes, with the dominant aerobic respiration metabolic pathway involved in organic matter decomposition, were observed in TG and TC. The results indicated that TG treatment most effectively promoted carbon fractions and microbial activity that could strengthen soil health. Full article
(This article belongs to the Section Innovative Cropping Systems)
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25 pages, 4065 KiB  
Article
Selective Enrichment of Fibrous Fragments Formed from Milled Carbon Fibers by Means of Gravitational Settling in a Liquid
by Nicolas Rodriguez y Fischer, Kerstin Kämpf, Torben Peters, Nico Dziurowitz, Carmen Thim, Daniela Wenzlaff, Asmus Meyer-Plath and Daphne Bäger
Fibers 2025, 13(6), 69; https://doi.org/10.3390/fib13060069 - 26 May 2025
Viewed by 1066
Abstract
The aim to reduce health risks of workers related to inhalative exposure to potentially toxic dusts requires the selection of appropriate measures depending on the hazard classification of the dust-composing materials. Due to their biodurability, respirable carbon fibers and their fragments can impose [...] Read more.
The aim to reduce health risks of workers related to inhalative exposure to potentially toxic dusts requires the selection of appropriate measures depending on the hazard classification of the dust-composing materials. Due to their biodurability, respirable carbon fibers and their fragments can impose such health risks but are currently lacking hazard classification. Here, a method is presented for fragmenting carbon fiber materials and enriching fibrous fragments to a level that is expected to allow differentiating between fiber and particle overload-related toxic effects. The method was applied to a commercial polyacrylonitrile-based carbon fiber. It was ground in an oscillating ball mill, homogenized in a liquid using ultrasonication and left undisturbed for gravitational settling. This way, a vertical gradient in particle size and shape formed, from which the supernatant was collected. Fragment morphologies were characterized with large ensemble statistics by semi-automated evaluation of scanning electron microscopy images employing an artificial neural network for binary semantic segmentation. The number of fibrous fragments of respirable and thus critical fiber morphology was increased from 0.36×106 to 6×106 WHO-analog fibers per mg. This corresponds to a factor of about 15 compared to the initial ground material. Since the mass percentage of non-fibrous objects was also significantly reduced, the requirements for a subsequently scheduled toxicological study with intraperitoneal application were fulfilled. Intraperitoneal testing is an accepted method for assessing the carcinogenic potential of biopersistent fibers. The developed method allows enriching fibrous fractions of concern at acceptable throughput and enables testing fiber toxicological effects of respirable fragments from disintegrated polyacrylonitrile-based carbon fibers. Full article
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15 pages, 6196 KiB  
Article
Effects of Early-Stage Treeline Shifts on Soil Microbial Biomass and Catabolic Diversity in Reserved and Grazed Subalpine Meadows
by Kristina Ivashchenko, Anastasiya Romanova, Sofia Sushko, Anna Zhuravleva, Anna Kvitkina, Anna Khodzhaeva and Nadezhda Ananyeva
Plants 2025, 14(10), 1541; https://doi.org/10.3390/plants14101541 - 20 May 2025
Viewed by 448
Abstract
Treelines are advancing upward on mountain slopes due to climate warming and reduced grazing intensity. However, the effects of initial vegetation changes on soil C, N, and P retention, microbial biomass, and catabolic diversity in the subalpine meadows during the early stages of [...] Read more.
Treelines are advancing upward on mountain slopes due to climate warming and reduced grazing intensity. However, the effects of initial vegetation changes on soil C, N, and P retention, microbial biomass, and catabolic diversity in the subalpine meadows during the early stages of treeline shifts remain poorly understood. This research aimed to better understand the direction and drivers of microbial processes related to C, N, and P cycles in the soil of subalpine natural and grazed meadows, with treatments involving meadow grasses alone (GR, control) and as a mixture with forest litter, specifically birch leaves (BLs), in a one-year microcosm experiment. The addition of BLs with GR resulted in a 12–67% decrease in the retention of C, N, and P in soil microbial biomass, but an 8–9% increase in catabolic diversity compared to the control. The most pronounced effect was observed in the N content of the soil microbial biomass (MBN) for both land uses. The increased proportion of recalcitrant plant residue fractions (acid-insoluble and non-polar extractables) contributed to the decrease in soil MBN content. This shift also reduced the microbial metabolic response to carbohydrates in total substrate-induced respiration, leading to a more balanced and catabolically diverse microbial community. These results improve our understanding of the early response of C, N, and P cycling in mountain soils to treeline shifts mediated by climate warming. Full article
(This article belongs to the Topic Plant-Soil Interactions, 2nd Volume)
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18 pages, 6278 KiB  
Article
Application of Deep Learning Techniques for Air Quality Prediction: A Case Study in Macau
by Thomas M. T. Lei, Jianxiu Cai, Wan-Hee Cheng, Tonni Agustiono Kurniawan, Altaf Hossain Molla, Mohd Shahrul Mohd Nadzir, Steven Soon-Kai Kong and L.-W. Antony Chen
Processes 2025, 13(5), 1507; https://doi.org/10.3390/pr13051507 - 14 May 2025
Viewed by 1160
Abstract
To better inform the public about ambient air quality and associated health risks and prevent cardiovascular and chronic respiratory diseases in Macau, the local government authorities apply the Air Quality Index (AQI) for air quality management within its jurisdiction. The application of AQI [...] Read more.
To better inform the public about ambient air quality and associated health risks and prevent cardiovascular and chronic respiratory diseases in Macau, the local government authorities apply the Air Quality Index (AQI) for air quality management within its jurisdiction. The application of AQI requires first determining the sub-indices for several pollutants, including respirable suspended particulates (PM10), fine suspended particulates (PM2.5), nitrogen dioxide (NO2), ozone (O3), sulfur dioxide (SO2), and carbon monoxide (CO). Accurate prediction of AQI is crucial in providing early warnings to the public before pollution episodes occur. To improve AQI prediction accuracy, deep learning methods such as artificial neural networks (ANNs) and long short-term memory (LSTM) models were applied to forecast the six pollutants commonly found in the AQI. The data for this study was accessed from the Macau High-Density Residential Air Quality Monitoring Station (AQMS), which is located in an area with high traffic and high population density near a 24 h land border-crossing facility connecting Zhuhai and Macau. The novelty of this work lies in its potential to enhance operational AQI forecasting for Macau. The ANN and LSTM models were run five times, with average pollutant forecasts obtained for each model. Results demonstrated that both models accurately predicted pollutant concentrations of the upcoming 24 h, with PM10 and CO showing the highest predictive accuracy, reflected in high Pearson Correlation Coefficient (PCC) between 0.84 and 0.87 and Kendall’s Tau Coefficient (KTC) between 0.66 and 0.70 values and low Mean Bias (MB) between 0.06 and 0.10, Mean Fractional Bias (MFB) between 0.09 and 0.11, Root Mean Square Error (RMSE) between 0.14 and 0.21, and Mean Absolute Error (MAE) between 0.11 and 0.17. Overall, the LSTM model consistently delivered the highest PCC (0.87) and KTC (0.70) values and the lowest MB (0.06), MFB (0.09), RMSE (0.14), and MAE (0.11) across all six pollutants, with the lowest SD (0.01), indicating greater precision and reliability. As a result, the study concludes that the LSTM model outperforms the ANN model in forecasting air pollutants in Macau, offering a more accurate and consistent prediction tool for local air quality management. Full article
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16 pages, 3509 KiB  
Article
Microbial Carbon Limitation Mediates Soil Organic Carbon Sequestration in Sugarcane–Watermelon Intercropping System
by Lixue Wu, Yue Fu, Tian Zhang and Tingting Sun
Microorganisms 2025, 13(5), 1049; https://doi.org/10.3390/microorganisms13051049 - 30 Apr 2025
Viewed by 399
Abstract
Intercropping is an effective approach for enhancing soil organic carbon (SOC) sequestration. However, the effects of intercropping on SOC dynamics and the underlying factors in rhizosphere and bulk soils are still unclear. In this study, we examined the impacts of sugarcane monoculture and [...] Read more.
Intercropping is an effective approach for enhancing soil organic carbon (SOC) sequestration. However, the effects of intercropping on SOC dynamics and the underlying factors in rhizosphere and bulk soils are still unclear. In this study, we examined the impacts of sugarcane monoculture and sugarcane–watermelon intercropping on soil properties, soil respiration, SOC fractions, and microbial C limitation with continuous two years in 2023–2024 years in the Nala area of Guangxi Province. Our results revealed that intercropping significantly decreased CO2/SOC by 25% and microbial C limitation by 21% in the rhizosphere, with more pronounced reductions observed in bulk soil by 33% and 25%, respectively. This means that the intercropping reduced soil respiration and this effect can be offset by the rhizosphere effects. Additionally, the sugarcane–watermelon intercropping increased the contents of mineral-associated organic carbon (MAOC) by 15~18% and particulate organic carbon (POC) by 34~46%. The random forest analysis indicated that enzyme activities (explaining 20~38% of variation) and soil properties (explaining 22% of variation) were the primary drivers of reduced CO2 emissions. The PLS-PM showed that intercropping decreased microbial C limitation by influencing soil pH and soil water content (SWC), and then increased MAOC, which finally led to a decline in CO2 emissions. Overall, these findings highlight the decreasing CO2 emissions during the use of the intercropping system and the importance of microbial C limitation in the soil C cycle via soil respiration and SOC fractions. Full article
(This article belongs to the Section Environmental Microbiology)
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22 pages, 7708 KiB  
Article
Top and Side Leakage Effects on Thermoregulation and Moisture Retention with Facemask Wearing
by Kian Barari, Xiuhua Si, Rozhin Hajian and Jinxiang Xi
J. Respir. 2025, 5(2), 5; https://doi.org/10.3390/jor5020005 - 3 Apr 2025
Viewed by 1185
Abstract
Background/Objectives: Mask-wearing-induced discomfort often leads to unconscious loosening of the mask to relieve the discomfort, thereby compromising protective efficacy. This study investigated how leakage flows affect mask-associated thermoregulation and vapor trapping to inform better mask designs. An integrated ambience–mask–face–airway model with various mask-wearing [...] Read more.
Background/Objectives: Mask-wearing-induced discomfort often leads to unconscious loosening of the mask to relieve the discomfort, thereby compromising protective efficacy. This study investigated how leakage flows affect mask-associated thermoregulation and vapor trapping to inform better mask designs. An integrated ambience–mask–face–airway model with various mask-wearing misfits was developed. Methods: The transient warming/cooling effects, thermal buoyancy force, tissue heat generation, vapor phase change, and fluid/heat/mass transfer through a porous medium were considered in this model, which was validated using Schlieren imaging, a thermal camera, and velocity/temperature measurements. Leakages from the top and side of the mask were analyzed in comparison to a no-leak scenario under cyclic respiration conditions. Results: A significant inverse relationship was observed between mask leakage and facial temperature/humidity. An equivalent impact from buoyancy forces and exhalation flow inertia was observed both experimentally and numerically, indicating a delicate balance between natural convection and forced convection, which is sensitive to leakage flows and critical in thermo-humidity regulation. For a given gap, the leakage fraction was not constant within one breathing cycle but constantly increased during exhalation. Persistently higher temperatures were found in the nose region throughout the breathing cycle in a sealed mask and were mitigated during inhalation when gaps were present. Vapor condensation occurred within the mask medium during exhalation in all mask-wearing cases. Conclusions: The thermal and vapor temporal variation profiles were sensitive to the location of the gap, highlighting the feasibility of leveraging temperature and relative humidity to test mask fit and quantify leakage fraction. Full article
(This article belongs to the Collection Feature Papers in Journal of Respiration)
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22 pages, 2994 KiB  
Article
HTLV-1 p13 Protein Hijacks Macrophage Polarization and Promotes T-Cell Recruitment
by Ramona Moles, Maria Omsland, Cynthia A. Pise-Masison, Jeffrey J. Subleski, Daniel W. McVicar, Sarkis Sarkis, Anna Gutowska, Luca Schifanella, Melvin Doster, Robyn Washington-Parks, Vincenzo Ciminale and Genoveffa Franchini
Viruses 2025, 17(4), 471; https://doi.org/10.3390/v17040471 - 26 Mar 2025
Viewed by 1607
Abstract
The human T-cell leukemia type-1 (HTLV-1) retrovirus establishes chronic life-long infection in a fraction of infected individuals associated with severe pathological conditions. Although the mechanism driving disease development is not fully understood, current evidence indicates the essential functions of viral regulatory proteins. Among [...] Read more.
The human T-cell leukemia type-1 (HTLV-1) retrovirus establishes chronic life-long infection in a fraction of infected individuals associated with severe pathological conditions. Although the mechanism driving disease development is not fully understood, current evidence indicates the essential functions of viral regulatory proteins. Among these, the p13 protein has previously been shown to localize to the inner mitochondrial membrane in T cells, altering mitochondrial biology and T-cell function. While CD4+ T cells are the primary cell target of HTLV-1 infection, genomic viral DNA has also been detected in monocytes, macrophages, and dendritic cells, which orchestrate innate and adaptive immunity and play a critical role in protecting against virus-induce diseases by establishing the appropriate balance of pro and anti-inflammatory responses. Given the central role of mitochondria in monocyte differentiation, we investigated the effect of p13 in monocytes/macrophages and found that by localizing to mitochondria, p13 affects mitochondrial respiration. Moreover, we demonstrate that p13 expression affects macrophage polarization to favor the recruitment of CD4+ T cells, the primary target of the virus, potentially facilitating the spread of viral infection and the development of disease. Full article
(This article belongs to the Special Issue Human T-Cell Leukemia Virus (HTLV) Infection and Treatment)
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13 pages, 1966 KiB  
Article
Long-Term Effects of Biochar Application on Soil Heterotrophic Respiration in a Warm–Temperate Oak Forest
by Shinpei Yoshitake, Kakuya Enichi, Yuki Tsukimori, Toshiyuki Ohtsuka, Hiroshi Koizumi and Mitsutoshi Tomotsune
Forests 2025, 16(3), 489; https://doi.org/10.3390/f16030489 - 11 Mar 2025
Viewed by 741
Abstract
Biochar application as a soil amendment is gaining attention as a stable, long-term carbon sequestration strategy for the mitigation of climate change. However, biochar applied to the soil may increase soil carbon efflux. This study aimed to determine the long-term (8 years) effects [...] Read more.
Biochar application as a soil amendment is gaining attention as a stable, long-term carbon sequestration strategy for the mitigation of climate change. However, biochar applied to the soil may increase soil carbon efflux. This study aimed to determine the long-term (8 years) effects of biochar application to the forest floor on soil carbon effluxes (soil respiration [SR] and heterotrophic respiration [HR]) in a warm–temperate oak forest. Biochar was applied at the rate of 0, 5, or 10 Mg ha−1 to 20 m × 20 m plots (n = 4). The SR and HR rates were determined using the closed chamber method and the trenching method. The annual SR tended to increase over 8 years following biochar application, whereas a significant increase in the annual HR (+31%–37%) was observed in the short term (<3 years). The increased HR likely included CO2 emissions from the decomposition of the labile fraction of biochar carbon and from the microbial decomposition of the original soil organic matter stimulated through changes in the soil physicochemical environment, such as soil moisture and pH. The results suggest that a short-term increase in HR should be considered in the evaluation of carbon sequestration in response to biochar addition to forest ecosystems. Full article
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16 pages, 6875 KiB  
Article
Metabolomic-Based Assessment of Earthworm (Eisenia fetida) Exposure to Different Petroleum Fractions in Soils
by Meiyu Liu, Mutian Wang, Xiaowen Fu, Fanyong Song, Fangyuan Zhou, Tianyuan Li and Jianing Wang
Metabolites 2025, 15(2), 97; https://doi.org/10.3390/metabo15020097 - 5 Feb 2025
Viewed by 1268
Abstract
Background/Objectives: Petroleum contamination in soil exerts toxic effects on earthworms (Eisenia fetida) through non-polar narcotic mechanisms. However, the specific toxicities of individual petroleum components remain insufficiently understood. Methods: This study investigates the effects of four petroleum components—saturated hydrocarbons, aromatic hydrocarbons, resins, [...] Read more.
Background/Objectives: Petroleum contamination in soil exerts toxic effects on earthworms (Eisenia fetida) through non-polar narcotic mechanisms. However, the specific toxicities of individual petroleum components remain insufficiently understood. Methods: This study investigates the effects of four petroleum components—saturated hydrocarbons, aromatic hydrocarbons, resins, and asphaltenes—on earthworms in artificially contaminated soil, utilizing a combination of biochemical biomarker analysis and metabolomics to uncover the underlying molecular mechanisms. Results: The results revealed that aromatic hydrocarbons are the most toxic fraction, with EC50 concentrations significantly lower than those of other petroleum fractions. All tested fractions triggered notable metabolic disturbances and immune responses in earthworms after 7 days of exposure, as evidenced by significant changes in metabolite abundance within critical pathways such as arginine synthesis, a-linolenic acid metabolism, and the pentose phosphate pathway. According to the KEGG pathway analysis, saturated hydrocarbon fractions induced marked changes in glycerophospholipid metabolism, and arginine and proline metabolism pathways, contributing to the stabilization of the protein structure and membrane integrity. Aromatic hydrocarbon fractions disrupted the arachidonic acid metabolic pathway, leading to increased myotube production and enhanced immune defense mechanisms. The TCA cycle and riboflavin metabolic pathway were significantly altered during exposure to the colloidal fraction, affecting energy production and cellular respiration. The asphaltene fraction significantly impacted glycolysis, accelerating energy cycling to meet stress-induced increases in energy demands. Conclusions: Aromatic hydrocarbons accounted for the highest level of toxicity among the four components in petroleum-contaminated soils. However, the contributions of other fractions to overall toxicity should not be ignored, as each fraction uniquely affects key metabolic pathways and biological functions. These findings emphasize the importance of monitoring metabolic perturbations caused by petroleum components in non-target organisms such as earthworms. They also reveal the specificity of the toxic metabolic effects of different petroleum components on earthworms. Full article
(This article belongs to the Section Environmental Metabolomics)
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15 pages, 2669 KiB  
Article
Acute Severe Hypoxia Decreases Mitochondrial Chain Complex II Respiration in Human Peripheral Blood Mononuclear Cells
by Marianne Riou, Anne-Laure Charles, Irina Enache, Charles Evrard, Cristina Pistea, Margherita Giannini, Anne Charloux and Bernard Geny
Int. J. Mol. Sci. 2025, 26(2), 705; https://doi.org/10.3390/ijms26020705 - 15 Jan 2025
Cited by 1 | Viewed by 1534
Abstract
Peripheral blood mononuclear cells’ (PBMCs) mitochondrial respiration is impaired and likely involved in myocardial injury and heart failure pathophysiology, but its response to acute and severe hypoxia, often associated with such diseases, is largely unknown in humans. We therefore determined the effects of [...] Read more.
Peripheral blood mononuclear cells’ (PBMCs) mitochondrial respiration is impaired and likely involved in myocardial injury and heart failure pathophysiology, but its response to acute and severe hypoxia, often associated with such diseases, is largely unknown in humans. We therefore determined the effects of acute hypoxia on PBMC mitochondrial respiration and ROS production in healthy volunteers exposed to controlled oxygen reduction, achieving an inspired oxygen fraction of 10.5%. We also investigated potential relationships with gene expression of key biomarkers of hypoxia, succinate and inflammation, as hypoxia and inflammation share common mechanisms involved in cardiovascular disease. Unlike global mitochondrial respiration, hypoxemia with a spO2 ≤ 80% significantly reduced PBMC complex II respiration (from 6.5 ± 1.2 to 3.1 ± 0.5 pmol/s/106 cell, p = 0.04). Complex II activity correlated positively with spO2 (r = 0.63, p = 0.02) and inversely correlated with the succinate receptor SUCNR1 (r = −0.68), the alpha-subunit of the hypoxia-inducible factor (HIF-1α, r = −0.61), the chemokine ligand-9 (r = −0.68) and interferon-stimulated gene 15 (r = −0.75). In conclusion, severe hypoxia specifically impairs complex II respiration in association with succinate, inflammation and HIF-1α pathway interactions in human PBMCs. These results support further studies investigating whether modulation of complex II activity might modify the inflammatory and metabolic alterations observed in heart failure. Full article
(This article belongs to the Special Issue Molecular Mechanisms and Pathophysiology of Myocardial Disease)
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