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Search Results (1,345)

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Keywords = plant pathways modeling

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29 pages, 2859 KB  
Article
α-Linolenic Acid Alleviates Diabetic Cardiomyopathy by Activating AMPK-STAT3 Pathway to Inhibit Ferritinophagy and Enhance SLC7A11-GPX4 Antioxidant Axis
by Ziqian Zhang, Xue Bai, Qian Du and Jianhong Yang
Molecules 2026, 31(1), 79; https://doi.org/10.3390/molecules31010079 (registering DOI) - 24 Dec 2025
Abstract
Diabetic cardiomyopathy (DCM) is a severe complication of diabetes, in which ferroptosis is a key pathogenic mechanism. This study examines how alpha-linolenic acid (ALA), a plant-derived omega-3 polyunsaturated fatty acid, protects against damage from ferroptosis in DCM. Using an in vitro model of [...] Read more.
Diabetic cardiomyopathy (DCM) is a severe complication of diabetes, in which ferroptosis is a key pathogenic mechanism. This study examines how alpha-linolenic acid (ALA), a plant-derived omega-3 polyunsaturated fatty acid, protects against damage from ferroptosis in DCM. Using an in vitro model of H9C2 cardiomyocytes treated with high glucose/palmitate, combined with a high-fat diet and mouse model of low-dose streptozotocin (STZ)-induced diabetes, this research demonstrates for the first time that ALA significantly alleviates cardiac dysfunction and prevents ferroptosis. Mechanistically, ALA inhibits STAT3 phosphorylation by activating the AMPK signaling pathway, thereby reducing NCOA4-mediated ferritinophagy and mitigating mitochondrial iron overload and reactive oxygen species accumulation. It also enhances the function of the SLC7A11/GSH/GPX4 axis, reducing lipid peroxidation (LPO)-induced ferroptosis. Collectively, these findings indicate that ALA protects against diabetic cardiomyopathy by coordinating the regulation of ferritinophagy and antioxidant defense through the AMPK-STAT3 pathway, offering a potential therapeutic strategy for disease management. Full article
13 pages, 3394 KB  
Article
Resveratrol Prevents Breast Cancer Metastasis by Inhibiting Wnt/β-Catenin Pathway-Mediated Epithelial–Mesenchymal Transition
by Xue Fang, En Ma, Runshu Wang, Jingwei Zhang, Yirong Tang, Jinxiao Chen, Weidong Zhu, Da Wo and Dan-ni Ren
Pharmaceuticals 2026, 19(1), 41; https://doi.org/10.3390/ph19010041 - 23 Dec 2025
Abstract
Background: Breast cancer is the most prevalent cancer in women, and metastatic breast cancer remains a major cause of cancer-related deaths. Resveratrol (RSV) is a natural compound found in various plants and is known to exhibit various anti-cancer effects. The present study [...] Read more.
Background: Breast cancer is the most prevalent cancer in women, and metastatic breast cancer remains a major cause of cancer-related deaths. Resveratrol (RSV) is a natural compound found in various plants and is known to exhibit various anti-cancer effects. The present study aims to investigate the therapeutic effects and mechanisms of RSV in inhibiting breast cancer metastasis in a murine model of 4T1 breast tumor that shares close molecular features with human triple negative breast cancer. Methods: Murine breast cancer 4T1 cells were used to examine the effects of RSV on breast cancer metastasis and epithelial–mesenchymal transition (EMT). In vitro cell proliferation and Transwell migration assays and in vivo 4T1 tumor transplantation models were established in female Balb/c mice to determine the anti-metastatic effects of RSV and its mechanism of action. Results: RSV significantly inhibited 4T1 tumor cell migration and significantly decreased expression levels of EMT markers Snail and Vimentin, as well as the nuclear translocation of β-catenin both in vitro and in vivo. Knockdown of β-catenin similarly reduced the expression levels of EMT markers. RSV significantly decreased the number of lung metastases in 4T1-implanted mice by inhibiting Wnt/β-catenin signaling pathway activation. RSV (150 mg/kg/day) reduced the number of visible tumor metastatic nodules and the histological count of metastatic lung carcinomas by 51.82% and 62.58%, respectively, compared to vehicle administration. Conclusions: Our study provides important new mechanistic insight into the strong anti-cancer effects of RSV in inhibiting 4T1 breast cancer metastasis by preventing Wnt/β-catenin signaling pathway-mediated epithelial–mesenchymal transition. These findings suggest the therapeutic potential of RSV as a promising drug in the treatment of metastatic breast cancer. Full article
(This article belongs to the Section Medicinal Chemistry)
30 pages, 4254 KB  
Article
Holistic Dynamic Modeling of Open-Cathode PEM Fuel Cells for Sustainable Hydrogen Propulsion in UAVs
by Teresa Donateo, Andrea Graziano Bonatesta and Antonio Ficarella
Sustainability 2026, 18(1), 163; https://doi.org/10.3390/su18010163 - 23 Dec 2025
Abstract
The adoption of proton exchange membrane fuel cells (PEMFCs) in unmanned aerial vehicles (UAVs) offers a sustainable pathway to zero-emission propulsion, supporting aviation decarbonization by replacing battery or fossil fuel systems with efficient hydrogen technology. This work presents the development, validation, and application [...] Read more.
The adoption of proton exchange membrane fuel cells (PEMFCs) in unmanned aerial vehicles (UAVs) offers a sustainable pathway to zero-emission propulsion, supporting aviation decarbonization by replacing battery or fossil fuel systems with efficient hydrogen technology. This work presents the development, validation, and application of a comprehensive dynamic model of a 1 kW open-cathode PEMFC system, including complete balance of plant (BOP) and control logic for four cooling fans, a purge valve, and a short-circuit unit (SCU). The model was validated through extensive experiments with step, triangular, and real-world UAV current profiles. Under steady-state conditions, it reproduces stack voltage with a <1 V average error and a temperature of 2.5 °C. Dynamic modeling accurately predicts fan behavior, purge/SCU events, and transient voltage drops. Applied to a 25 min UAV flight, the model quantifies reactant-management impacts: purge events increase H2 usage by 4.8%, with SCU raising total to 5.6% above stoichiometric consumption. Altitude analysis shows ambient temperature reduction dominates the oxygen partial pressure effects, yielding net cell voltage increase under current-based fan control. These insights underscore explicit BOP and ambient modeling for accurate UAV endurance estimation and strategy optimization, providing a basis for future altitude-chamber validation. By enabling precise BOP dynamics simulation and H2 optimization, this model advances the achievement of affordable clean energy, facilitating an extended endurance with minimal environmental impact. Full article
(This article belongs to the Special Issue Advances in Sustainability in Air Transport and Multimodality)
22 pages, 8602 KB  
Article
Modeling Impacts of Climate Change and Adaptation Measures on Rice Growth in Hainan, China
by Rongchang Yang, Yahui Guo, Jiangwen Nie, Wei Zhou, Ruichen Ma, Bo Yang, Jinhe Shi, Jing Geng, Wenxiang Wu, Ji Liu, W. M. W. W. Kandegama and Mario Cunha
Sustainability 2026, 18(1), 115; https://doi.org/10.3390/su18010115 - 22 Dec 2025
Abstract
Rising temperatures, extreme precipitation events such as excessive or insufficient rainfall, increasing levels of carbon dioxide, and associated climatic factors will persistently impact crop growth and agricultural production. The warming temperatures have reduced the agricultural crop yields. Rice (Oryza sativa L.) is [...] Read more.
Rising temperatures, extreme precipitation events such as excessive or insufficient rainfall, increasing levels of carbon dioxide, and associated climatic factors will persistently impact crop growth and agricultural production. The warming temperatures have reduced the agricultural crop yields. Rice (Oryza sativa L.) is the major food crop, which is particularly susceptible to the effects of climate change. It is very important to accurately evaluate the impacts of climate change on rice growth and rice yield. In this study, the rice growth during 1981–2018 (baseline period) and 2041–2100 (future period) were separately simulated and compared within the CERES-Rice model (v4.6) using high-quality weather data, soil, and field experimental data at six agro-meteorological stations in Hainan Province. For the climate data of the future period, the SSP1-2.6, SSP3-7.0, and SSP5-8.5 scenarios were applied, with carbon dioxide (CO2) fertilization effects considered. The adaptation strategies such as adjusting planting dates and switching rice cultivars were also assessed. The simulation results indicated that the early rice yields in the 2050s, 2070s, and 2090s were projected to decrease by 6.2%, 11.8%, and 20.0% when the CO2 fertilization effect was not considered, compared with the results of the baseline period, respectively, while late rice yields would decline by 9.9%, 23.4%, and 36.3% correspondingly. When accounting for the CO2 fertilization effect, the yields of early rice and late rice in the 2090s increased 16.9% and 6.2%, respectively. Regarding adaptation measures, adjusting planting dates and switching rice cultivars could increase early rice yields by 22.7% and 43.3%, respectively, while increasing late rice yields by 20.2% and 34.2% correspondingly. This study holds substantial scientific importance for elucidating the mechanistic pathways through which climate change influences rice productivity in tropical agro-ecosystems, and provides a critical foundation for formulating evidence-based adaptation strategies to mitigate climate-related risks in a timely manner. Cultivar substitution and temporal shifts in planting dates constituted two adaptation strategies for attenuating the adverse impacts of anthropogenic climate change on rice. Full article
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16 pages, 2642 KB  
Article
Reciprocal BLUP: A Predictability-Guided Multi-Omics Framework for Plant Phenotype Prediction
by Hayato Yoshioka, Gota Morota and Hiroyoshi Iwata
Plants 2026, 15(1), 17; https://doi.org/10.3390/plants15010017 - 20 Dec 2025
Viewed by 101
Abstract
Sustainable improvement of crop performance requires integrative approaches that link genomic variation to phenotypic expression through intermediate molecular pathways. Here, we present Reciprocal Best Linear Unbiased Prediction (Reciprocal BLUP), a predictability-guided multi-omics framework that quantifies the cross-layer relationships among the genome, metabolome, and [...] Read more.
Sustainable improvement of crop performance requires integrative approaches that link genomic variation to phenotypic expression through intermediate molecular pathways. Here, we present Reciprocal Best Linear Unbiased Prediction (Reciprocal BLUP), a predictability-guided multi-omics framework that quantifies the cross-layer relationships among the genome, metabolome, and microbiome to enhance phenotype prediction. Using a panel of 198 soybean accessions grown under well-watered and drought conditions, we first evaluated four direction-specific prediction models (genome → microbiome, genome → metabolome, metabolome → microbiome, and microbiome → metabolome) to estimate the predictability of individual omics features. We evaluated whether subsets of features with high cross-omics predictability improved phenotype prediction. These cross-layer models identify features that play physiologically meaningful roles within multi-omics systems, enabling the prioritization of variables that capture coherent biological signals enriched with phenotype-relevant information. Consequently, metabolome features were highly predictable from microbiome data, whereas microbiome predictability from metabolomic data was weaker and more environmentally dependent, revealing an asymmetric relationship between these layers. In the subsequent phenotype prediction analysis, the model incorporating predictability-based feature selection substantially outperformed models using randomly selected features and achieved prediction accuracies comparable to those of the full-feature model. Under drought conditions, the phenotype prediction models based on metabolomic or microbiomic kernels (MetBLUP or MicroBLUP) outperformed the genomic baseline (GBLUP) for several biomass-related traits, indicating that the environment-responsive omics layers captured phenotypic variations that were not explained by additive genetic effects. Our results highlight the hierarchical interactions among genomic, metabolic, and microbial systems, with the metabolome functioning as an integrative mediator linking the genotype, environment, and microbiome composition. The Reciprocal BLUP framework provides a biologically interpretable and practical approach for integrating multi-omics data, improving phenotype prediction, and guiding omics-based feature selection in plant breeding. Full article
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17 pages, 5230 KB  
Article
Retrieving Woody Components from Time-Series Gap-Fraction and Multispectral Satellite Observations over Deciduous Forests
by Woohyeok Kim, Jaese Lee, Yoojin Kang, Jungho Im, Bokyung Son and Jiwon Lee
Remote Sens. 2026, 18(1), 10; https://doi.org/10.3390/rs18010010 - 19 Dec 2025
Viewed by 97
Abstract
Leaf area index (LAI) is essential for understanding vegetation dynamics, ecosystem processes, and land–atmosphere interactions. Various measurement methods exist, but gap-fraction-based indirect methods are preferred due to their reduced labor and field survey time in comparison to direct methods. However, gap-fraction-based field observations, [...] Read more.
Leaf area index (LAI) is essential for understanding vegetation dynamics, ecosystem processes, and land–atmosphere interactions. Various measurement methods exist, but gap-fraction-based indirect methods are preferred due to their reduced labor and field survey time in comparison to direct methods. However, gap-fraction-based field observations, often referred to as plant area index (PAI), frequently overestimate LAI because they include woody components. To mitigate this issue, the woody-to-total-area ratio (α) can be utilized to exclude these woody components from PAI, yielding more accurate LAI estimates (hereafter referred to as LAIadjusted). In this study, we demonstrate a novel method to estimate α using Sentinel-2-based normalized difference vegetation index (NDVI) and time-series PAI measurements. The α estimates effectively reduce the influence of woody components in PAI within deciduous broadleaf forests (DBF). Moreover, LAIadjusted shows good agreement with the Sentinel-2 LAI, which represents effective LAI derived from the PROSAIL model. Notably, the spatial distribution of α effectively captured the expected seasonal dynamics across various forest types. In DBF, α values increased during winter due to leaf fall when compared to the growing season, while seasonal variations were relatively small in evergreen needleleaf forest (ENF). We further confirmed that our method demonstrates greater robustness with NDVI than with other vegetation indices that are more susceptible to topographic variation. Ultimately, this framework presents a promising pathway to mitigate biases in most gap-fraction-based PAI measurements, thereby enhancing the accuracy of vegetation structural assessments and supporting broader ecological and climate-related applications. Full article
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29 pages, 2731 KB  
Article
Study on the Improvement in Nuclear Generation Flexibility Under a Unified Electricity Market with a High Share of Renewables
by Ge Qin, Dongyuan Li, Kexin Hu, Qianying Gao, Jiaoshen Xu, Hui Ren and Jinling Lu
Processes 2026, 14(1), 7; https://doi.org/10.3390/pr14010007 - 19 Dec 2025
Viewed by 183
Abstract
China’s nuclear power plants traditionally operate to meet baseload needs, with minimal involvement in peak load regulation. However, as the share of renewable energy generation rapidly increases, the volatility of the power system and the demand for peak load regulation have significantly risen, [...] Read more.
China’s nuclear power plants traditionally operate to meet baseload needs, with minimal involvement in peak load regulation. However, as the share of renewable energy generation rapidly increases, the volatility of the power system and the demand for peak load regulation have significantly risen, necessitating greater nuclear power flexibility to meet the new power system’s requirements. Our study forecasts the energy structure and load demand for the Province of Liaoning in Northeastern China in 2035. Under this vision, it analyzes the flexibility challenges faced by nuclear generation units. A joint clearing model for spot electricity and ancillary services, along with an energy storage revenue model, was established. Based on this, this study analyzed the clearing results for various typical scenarios in the Province of Liaoning in 2035. The simulation results demonstrate that nuclear units will participate in peak shaving by the target year. This study demonstrates the feasibility of solid-state thermal storage in improving both flexibility and economic efficiency of nuclear generation. Based on these findings, policy recommendations are proposed, including improving regulation compensation mechanisms and promoting multi-energy coupling, providing crucial theoretical and practical support for the role transformation of nuclear generation entities in the new power system. This study establishes a full lifecycle economic assessment model for combined heat and power revenue versus thermal storage investment costs, considering integrated nuclear power–solid thermal energy storage heating systems as the primary technical pathway. Taking a configuration plan with a 715 MW heating capacity and a 6000 MWh thermal storage capacity as an example under Liaoning Province’s 2035 long-term scenario, the simulation results indicate that introducing solid thermal energy storage can significantly improve the revenue structure of nuclear units while meeting deep peak shaving demands, reducing the project’s static payback period to under 11 years. Full article
(This article belongs to the Special Issue Optimal Design, Control and Simulation of Energy Management Systems)
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23 pages, 1253 KB  
Review
Advances in Bioactive Compounds from Plants and Their Applications in Alzheimer’s Disease
by Steve Pavlov, Santosh Kumar Prajapati, Dhananjay Yadav, Andrea Marcano-Rodriguez, Hariom Yadav and Shalini Jain
Biomolecules 2026, 16(1), 7; https://doi.org/10.3390/biom16010007 - 19 Dec 2025
Viewed by 261
Abstract
Alzheimer’s disease (AD), the leading cause of dementia worldwide, is characterized by progressive neuronal loss, amyloid-β (Aβ) aggregation, tau hyperphosphorylation, oxidative stress, neuroinflammation, cholinergic dysfunction, and gut–brain axis dysregulation. Despite advances in anti-amyloid therapeutics, current interventions provide only modest symptomatic relief and face [...] Read more.
Alzheimer’s disease (AD), the leading cause of dementia worldwide, is characterized by progressive neuronal loss, amyloid-β (Aβ) aggregation, tau hyperphosphorylation, oxidative stress, neuroinflammation, cholinergic dysfunction, and gut–brain axis dysregulation. Despite advances in anti-amyloid therapeutics, current interventions provide only modest symptomatic relief and face limitations in accessibility, cost, and long-term efficacy. Plant-derived bioactive compounds, rooted in traditional medicine systems such as Ayurveda and Traditional Chinese Medicine, have gained increasing attention as multi-target therapeutic agents due to their pleiotropic actions, relative safety, and ability to cross the blood–brain barrier. This review synthesizes mechanistic and translational evidence on major phytochemicals, including withanolides (Withania somnifera), curcumin (Curcuma longa), ginkgolides and bilobalide (Ginkgo biloba), bacosides (Bacopa monnieri), ginsenosides (Panax ginseng), crocin/safranal (Crocus sativus), epigallocatechin-3-gallate (Camellia sinensis), rosmarinic acid (Salvia officinalis, Melissa officinalis), and asiaticosides (Centella asiatica). These compounds exert neuroprotective effects by inhibiting Aβ aggregation, reducing tau phosphorylation, scavenging reactive oxygen species, attenuating NF-κB-mediated inflammation, modulating cholinergic signaling, enhancing synaptic plasticity via brain-derived neurotrophic factor/cAMP response element-binding protein (BDNF/CREB) activation, and regulating gut microbiota. Multi-target approach analyses underscore their synergistic potential in targeting interconnected AD pathways. However, translation remains hindered by poor oral bioavailability, rapid metabolism, and variability in clinical outcomes. Advances in delivery platforms, including liposomes, bilosomes, solid lipid nanoparticles, and nanostructured lipid carriers, are improving stability, blood–brain penetration, and therapeutic efficacy in preclinical models. Collectively, plant-derived phytochemicals serve as promising, affordable, and multi-modal candidates for reshaping AD management, bridging traditional knowledge with modern therapeutic innovation. Full article
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23 pages, 8882 KB  
Article
Genome-Wide Identification, Structural Characterization, and Stress-Responsive Expression of the PsPP2C Gene Family in Pea (Pisum sativum)
by Zhi-Wei Wang, Min Liu, Yun-Zhe Cong, Wen-Jiao Wang, Tao Zhang, Hui-Tong Sang, Song Hou, Zi-Meng Sun, Guan Li, Ru-Mei Tian, Yong-Yi Yang, Kun Xie, Longxin Wang, Kai-Hua Jia and Na-Na Li
Agronomy 2025, 15(12), 2920; https://doi.org/10.3390/agronomy15122920 - 18 Dec 2025
Viewed by 156
Abstract
Protein phosphatase 2Cs (PP2Cs) constitute a widespread family of signaling regulators in plants and play central roles in abscisic acid (ABA)-mediated stress signaling; however, the PP2C gene family has not yet been systematically identified and characterized in pea (Pisum sativum), a [...] Read more.
Protein phosphatase 2Cs (PP2Cs) constitute a widespread family of signaling regulators in plants and play central roles in abscisic acid (ABA)-mediated stress signaling; however, the PP2C gene family has not yet been systematically identified and characterized in pea (Pisum sativum), a salt-sensitive legume crop. In this study, we identified 89 PsPP2C genes based on domain features and sequence homology. These genes are unevenly distributed across seven chromosomes and classified into ten subfamilies, providing a comparative framework for evaluating structural and regulatory diversification within the PsPP2C family. The encoded proteins vary substantially in length, physicochemical properties, and predicted subcellular localization, while most members contain the conserved PP2Cc catalytic domain. Intra- and interspecies homology analyses identified 19 duplicated gene pairs in pea and numerous orthologous relationships with several model plants; all reliable gene pairs exhibited Ka/Ks < 1, indicating pervasive purifying selection. PsPP2C genes also showed broad variation in exon number and intron phase, and their promoter regions contained diverse light-, hormone-, and stress-related cis-elements with heterogeneous positional patterns. Expression profiling across 11 tissues revealed pronounced tissue-specific differences, with generally higher transcript abundance in roots and seeds than in other tissues. Under salt treatment, approximately 20% of PsPP2C genes displayed concentration- or time-dependent transcriptional changes. Among them, PsPP2C67 and PsPP2C82—both belonging to the clade A PP2C subfamily—exhibited the most pronounced induction under high salinity and at early stress stages. Functional annotation indicated that these two genes are involved in ABA-related processes, including regulation of abscisic acid-activated signaling pathway, plant hormone signal transduction, and MAPK signaling pathway-plant. Collectively, this study provides a systematic characterization of the PsPP2C gene family, including its structural features, evolutionary patterns, and transcriptional responses to salt stress, thereby establishing a foundation for future functional investigations. Full article
(This article belongs to the Special Issue Cultivar Development of Pulses Crop—2nd Edition)
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25 pages, 948 KB  
Review
Heat Shock Transcription Factors as Central Integrators of Plant Stress Responses: From Thermotolerance to Multi-Stress Resilience
by Yuan Li, Kang Gong, Xinyi Wang, Zhihong Sun and Fei Ding
Biology 2025, 14(12), 1800; https://doi.org/10.3390/biology14121800 - 18 Dec 2025
Viewed by 181
Abstract
Heat shock transcription factors (HSFs) have long been recognized for their essential role in mediating thermotolerance via the activation of heat shock proteins (HSPs). Recent studies, however, have significantly broadened this view, revealing that HSFs function as versatile transcriptional regulators orchestrating plant adaptation [...] Read more.
Heat shock transcription factors (HSFs) have long been recognized for their essential role in mediating thermotolerance via the activation of heat shock proteins (HSPs). Recent studies, however, have significantly broadened this view, revealing that HSFs function as versatile transcriptional regulators orchestrating plant adaptation to a wide range of abiotic and biotic stresses. This review synthesizes current knowledge of HSF structure, activation, and canonical roles in the heat shock response, while emphasizing emerging insights into their diverse functions beyond heat stress. Evidence from both model and crop species demonstrates that many HSFs confer tolerance to a broad range of stresses, including drought, cold, salinity, oxidative stress, and pathogen attack, through intricate crosstalk with hormonal (e.g., ABA, SA, JA) and redox signaling pathways, as well as MAPK-mediated phosphorylation. We also discuss biotechnological strategies such as CRISPR/Cas-mediated genome editing, stress-inducible promoter engineering, and synthetic transcriptional circuits that offer promising avenues for fine-tuning HSF expression and enhancing multi-stress resilience in crops. A deeper understanding of HSF multifunctionality not only advances our comprehension of plant stress biology but also provides a foundation for engineering resilient crops in the context of global climate change. Full article
(This article belongs to the Special Issue Molecular Mechanisms of Plant Stress Adaptation)
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17 pages, 1421 KB  
Article
Bassia indica Attenuates Cardiotoxicity in a Rat Model via Anti-Inflammatory, Antioxidant, and Keap1/Nrf2 Modulation
by Fayyaz Anjum, Saad Touqeer, QurratUlAin Jamil, Ayesha Rida, Hafiz Muhammad Zubair, Adeel Sarfraz, Saleh Alfuraih, Waad Alrohily, Ali F. Almutairy, Ashfaq Ahmad, Mohammed Aufy and Shahid Muhammad Iqbal
Pharmaceuticals 2025, 18(12), 1907; https://doi.org/10.3390/ph18121907 - 18 Dec 2025
Viewed by 134
Abstract
Background: Drug-induced cardiotoxicity is a primary concern in clinical practice, especially in the context of oxidative stress induced by anti-cancer, antiviral, and antidiabetic drugs. Several strategies are devised to limit cardiotoxicity, which are supportive and provide symptomatic relief. This highlights the need [...] Read more.
Background: Drug-induced cardiotoxicity is a primary concern in clinical practice, especially in the context of oxidative stress induced by anti-cancer, antiviral, and antidiabetic drugs. Several strategies are devised to limit cardiotoxicity, which are supportive and provide symptomatic relief. This highlights the need to develop cardioprotective agents that circumvent the oxidative stress. Bassia indica is a cardiotonic plant with antioxidant properties traditionally used in Africa, South Asia, and China. We investigated its cardioprotective effects against doxorubicin-induced cardiotoxicity (DIC). Methods: B. indica extract (BiE) was analyzed by GC-MS and HPLC. Several antioxidant assays, including DPPH, FRAP, CUPRAC, NO, and H2O2 scavenging, were performed. In vivo attenuation of DIC was assessed in a rat model. Results: BiE contained several bioactive flavonoids, including 2-methoxy-4-vinylphenol, ferulic acid, gallic acid, kaempferol, and coumaric acid. Antioxidant assays demonstrated potent free-radical scavenging and antioxidant activity of BiE, providing mechanistic evidence for its in vivo amelioration of DIC. BiE treatment reduced myocardial oxidative stress by increasing endogenous antioxidant levels (p < 0.01), including SOD, CAT, and GSH. It upregulated Nrf2 and lowered Keap1 levels. This was also reflected in the restoration of cardiac tissue architecture and modulation of inflammatory markers, including IL-1β and TNF-α (p < 0.01). Cardiac tissue biomarkers were also improved. Conclusions: These findings conclude that BiE exerts cardiac protection by reducing oxidative stress and inflammation through modulation of the Keap1/Nrf2 pathway and decreasing the expression of IL-1β and TNF-α. Full article
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30 pages, 3804 KB  
Article
Evidence Supporting the Hydrophobic-Mismatch Model for Cytochrome b6f-Driven State Transitions in the Cyanobacterium Synechocystis Species PCC 6803
by Terezia Kovacs, Laszlo Kovacs, Mihaly Kis, Michito Tsuyama, Sindhujaa Vajravel, Eva Herman, Nia Petrova, Anelia Dobrikova, Tomas Zakar, Svetla Todinova, Sashka Krumova, Zoltan Gombos and Radka Vladkova
Membranes 2025, 15(12), 383; https://doi.org/10.3390/membranes15120383 - 17 Dec 2025
Viewed by 157
Abstract
While there is a consensus that the cytochrome b6f complex (cytb6f) in algae and plants is involved in the regulatory mechanism of oxygenic photosynthesis known as light-induced state transitions (STs), no such consensus exists for cyanobacteria. Here, [...] Read more.
While there is a consensus that the cytochrome b6f complex (cytb6f) in algae and plants is involved in the regulatory mechanism of oxygenic photosynthesis known as light-induced state transitions (STs), no such consensus exists for cyanobacteria. Here, we provide the first direct functional evidence for cytb6f using single-point mutation data. We introduced a PetD-Phe124Ala substitution in the cyanobacterium Synechocystis sp. PCC 6803 to test the key predictions of the hydrophobic-mismatch (HMM) model for cytb6f-driven STs in all oxygenic photosynthetic species. These predictions concern the role of the Phe/Tyr124fg-loop-PetD and the extent and kinetic characteristics of STs. The effects of PetD-F124A mutation on STs were monitored using 77K and Pulse-Amplitude-Modulated (PAM) fluorescence. For comparison, we employed a phycobilisome (PBS)-less Synechocystis mutant and wild-type (WT) strain, as well as the stn7 mutant and WT of Arabidopsis plant. The PetD-F124A mutation reduced the extent of STs and selectively affected the two-exponential kinetics components of the transitions. Under State 1 conditions, the mutant exhibited ~60% less energetic decoupling of PBS from photosystem I (PSI) compared to the WT. It is explainable by the HMM model with the inability of the PetD-F124A mutant, during the induction phase of the State 2→State 1 transition to adopt the cytb6f conformation with minimal hydrophobic thickness. PAM-derived parameters indicated that PSII electron transport function is not inhibited, and no detectable effect on cyclic electron transport around PSI was observed under low-light conditions. Circular dichroism and differential scanning calorimetry confirmed that both the PSI trimer/monomer ratio and the structural integrity of the PBSs are preserved in the mutant. The compensatory response to the mutation includes decreased PSI content and an increase in PBS rod size. In conclusion, (1) cytb6f is involved in cyanobacterial STs; (2) evidence is provided supporting the HMM model; (3) the electron transfer and signal transduction functions of cytb6f are separated into distinct domains; and (4) the signaling pathway regulating STs and pigment-protein composition in Synechocystis involves PetD-Phe124. Full article
(This article belongs to the Section Biological Membranes)
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21 pages, 5592 KB  
Article
Identification of the Populus euphratica XTHs Gene Family and the Response of PeXTH7 to Abiotic Stress
by Jing Li, Hongyan Jin, Tongrui Song, Donghui Miao, Qi Ning, Jianhao Sun, Zhijun Li, Peipei Jiao and Zhihua Wu
Plants 2025, 14(24), 3847; https://doi.org/10.3390/plants14243847 - 17 Dec 2025
Viewed by 202
Abstract
Populus euphratica Oliv. serves as a keystone species in desert riparian ecosystems. Owing to its pronounced tolerance to drought and salinity, as well as its robust reproductive capacity, it has become a pioneer species in desert oases. The xyloglucan endotransglucosylase (XET)/hydrolase (XTH [...] Read more.
Populus euphratica Oliv. serves as a keystone species in desert riparian ecosystems. Owing to its pronounced tolerance to drought and salinity, as well as its robust reproductive capacity, it has become a pioneer species in desert oases. The xyloglucan endotransglucosylase (XET)/hydrolase (XTH) gene family plays a critical role in the remodeling of plant cell walls; however, its potential biological functions in poplar remain poorly understood. In this study, we identified the XTH gene family in P. euphratica and conducted a preliminary functional analysis. A total of 33 PeXTH genes were identified, which were unevenly distributed across the chromosomes, with the highest density observed on chromosome 6. Conserved domain analysis indicated that most members contain the typical GH16 domain associated with xyloglucan endotransglucosylase activity. Phylogenetic analysis classified them into four distinct subgroups, exhibiting evolutionary conservation with the model dicot plant of Arabidopsis thaliana. Notably, the promoter analysis revealed an abundance of ABA-responsive and stress-related cis-elements, suggesting their potential involvement in response to multiple stresses. Under drought stress, PeXTH7 (PeuTF07G00088.1) exhibited a distinct expression pattern, with transcript levels significantly increasing with persistent treatment. RT-qPCR results confirmed that PeXTH7 is highly expressed in both roots and leaves. Furthermore, subcellular localization assays demonstrated that the PeXTH7 protein localizes to the secretory pathway and the cell wall, implying a role in cell wall dynamic remodeling through the regulation of xyloglucan metabolism. The PeXTH7-overexpressing transgenic lines exhibited a significant increase in root length compared to the wild-type controls. As the first systematic analysis of the XTH gene family in P. euphratica, this study fills an important knowledge gap and provides new insights into the adaptive mechanisms of desert tree species. Full article
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23 pages, 655 KB  
Article
Unlocking Demand-Side Flexibility in Cement Manufacturing: Optimized Production Scheduling for Participation in Electricity Balancing Markets
by Sebastián Rojas-Innocenti, Enrique Baeyens, Alejandro Martín-Crespo, Sergio Saludes-Rodil and Fernando A. Frechoso-Escudero
Energies 2025, 18(24), 6585; https://doi.org/10.3390/en18246585 - 17 Dec 2025
Viewed by 119
Abstract
The growing share of variable renewable energy sources in power systems is increasing the need for short-term operational flexibility—particularly from large industrial electricity consumers. This study proposes a practical, two-stage optimization framework to unlock this flexibility in cement manufacturing and support participation in [...] Read more.
The growing share of variable renewable energy sources in power systems is increasing the need for short-term operational flexibility—particularly from large industrial electricity consumers. This study proposes a practical, two-stage optimization framework to unlock this flexibility in cement manufacturing and support participation in electricity balancing markets. In Stage 1, a mixed-integer linear programming model minimizes electricity procurement costs by optimally scheduling the raw milling subsystem, subject to technical and operational constraints. In Stage 2, a flexibility assessment model identifies and evaluates profitable deviations from this baseline, targeting participation in Spain’s manual Frequency Restoration Reserve market. The methodology is validated through a real-world case study at a Spanish cement plant, incorporating photovoltaic (PV) generation and battery energy storage systems (BESS). The results show that flexibility services can yield monthly revenues of up to €800, with limited disruption to production processes. Additionally, combined PV + BESS configurations achieve electricity cost reductions and investment paybacks as short as six years. The proposed framework offers a replicable pathway for integrating demand-side flexibility into energy-intensive industries—enhancing grid resilience, economic performance, and decarbonization efforts. Full article
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Article
Multi-Objective Optimization of Socio-Ecological Systems for Global Warming Mitigation
by Pablo Tenoch Rodriguez-Gonzalez, Alejandro Orozco-Calvillo, Sinue Arnulfo Tovar-Ortiz, Elvia Ruiz-Beltrán and Héctor Antonio Olmos-Guerrero
World 2025, 6(4), 168; https://doi.org/10.3390/world6040168 - 16 Dec 2025
Viewed by 157
Abstract
Socio-ecological systems (SESs) exhibit nonlinear feedback across environmental, social, and economic processes, requiring integrative analytical tools capable of representing such coupled dynamics. This study presents a quantitative framework that integrates a compartmental model of a global human–ecosystem with two complementary optimization approaches (Fisher [...] Read more.
Socio-ecological systems (SESs) exhibit nonlinear feedback across environmental, social, and economic processes, requiring integrative analytical tools capable of representing such coupled dynamics. This study presents a quantitative framework that integrates a compartmental model of a global human–ecosystem with two complementary optimization approaches (Fisher Information (FI) and Multi-Objective Optimization (MOO)) to evaluate policy strategies for sustainability. The model represents biophysical and socio-economic interactions across 15 compartments, incorporating feedback loops between greenhouse gas (GHG) accumulation, temperature anomalies, and trophic–economic dynamics. Six policy-relevant decision variables were selected (wild plant mortality, sectoral prices (agriculture, livestock, and industry), base wages, and resource productivity) and optimized under temporal (25-year) and magnitude (±10%) constraints to ensure policy realism. FI-based optimization enhances system stability, whereas the MOO framework balances environmental, social, and economic objectives using the Ideal Point Method. Both approaches prevent the systemic collapse observed in the baseline scenario. The FI and MOO strategies reduce terminal global temperature by 11.4% and 15.0%, respectively, relative to the baseline (35 °C → 31.0 °C under FI; 35 °C → 29.7 °C under MOO). Resource-use efficiency, measured through the resource requirement coefficient (λ), improves by 8–10% under MOO (0.6767 → 0.6090) and by 6–7% under FI (0.6668 → 0.6262). These outcomes offer actionable guidance for long-term climate policy at national and international scales. The MOO framework provided the most balanced outcomes, enhancing environmental and social performance while maintaining economic viability. Overall, the integration of optimization and information-theoretic approaches within SES models can support evidence-based public policy design, offering actionable pathways toward resilient, efficient, and equitable sustainability transitions. Full article
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