Search Results (79)

Streptomycetes are vital microbial resources used in agriculture and biotechnology and are diverse secondary metabolites. The Streptomyces olivoreticuli YNK-FS0020 strain was isolated from the rhizosphere soil in Yunnan’s Wuliangshan Forest; its functions were explored via a series of experiments and genomic analysis. Indoor assays showed that this strain inhibits seven plant pathogens (including Fusarium oxysporum f. sp. cubense Tropical Race 4) and exhibits phosphorus solubilization, siderophore production, and plant-growth promotion. Genomic analysis revealed 47 secondary metabolite biosynthetic gene clusters: 12 shared over 60% similarity with known clusters (4 exhibited 100% similarity, involving antimycin and ectoine), while 19 showed low similarity or unknown functions, indicating the strain’s potential in the development of novel compounds. Genes related to tryptophan-IAA synthesis, phosphate metabolism, and siderophore systems were annotated, while metabolomics detected indole-3-acetic acid and kitasamycin, revealing mechanisms like hormonal regulation and antimicrobial secretion. In summary, YNK-FS0020 has potential for use in plant-growth promotion and disease control, aiding agricultural microbial resource utilization. Full article

Zinc (Zn) deficiency poses a major global health challenge, and wheat grains generally contain low Zn concentrations. In this study, the wheat cultivar ‘Zhongmai 175’ was identified as zinc-efficient. Hydroponic experiments demonstrated that Zn deficiency induced the secretion of oxalic acid and malic acid in root exudates and significantly increased total root length in ‘Zhongmai 175’. To elucidate the underlying regulatory mechanisms, transcriptome profiling via RNA sequencing was conducted under Zn-deficient conditions. A total of 2287 and 1935 differentially expressed genes (DEGs) were identified in roots and shoots, respectively. Gene Ontology enrichment analysis revealed that these DEGs were primarily associated with Zn ion transport, homeostasis, transmembrane transport, and hormone signaling. Key DEGs belonged to gene families including VIT, NAS, DMAS, ZIP, tDT, HMA, and NAAT. KEGG pathway analysis indicated that phenylpropanoid biosynthesis, particularly lignin synthesis genes, was significantly downregulated in Zn-deficient roots. In shoots, cysteine and methionine metabolism, along with plant hormone signal transduction, were the most enriched pathways. Notably, most DEGs in shoots were associated with the biosynthesis of phytosiderophores (MAs, NA) and ethylene. Overall, genes involved in Zn ion transport, phytosiderophore biosynthesis, dicarboxylate transport, and ethylene biosynthesis appear to play central roles in wheat’s adaptive response to Zn deficiency. These findings provide a valuable foundation for understanding the molecular basis of Zn efficiency in wheat and for breeding Zn-enriched varieties. Full article

Reducing the application of chemical fertilizers and remediating heavy metal pollution in soil are important directions in current agricultural research. Utilizing the plant-growth-promoting and remediation capabilities of bacteria can provide more environmentally friendly assistance to agricultural production. In this study, the Burkholderia alba YIM B08401 strain was isolated and identified from rhizospheric soil, subjected to whole-genome sequencing and analysis, and its Cd²⁺ adsorption efficiency and characteristics were confirmed using multiple experimental methods, including atomic absorption spectrometry (AAS), Fourier transform infrared spectroscopy (FTIR), and scanning electron microscopy with energy-dispersive X-ray spectroscopy (SEM-EDS). The results showed that the genome of strain YIM B08401 has a total length of 7,322,157 bp, a GC content of 66.39%, and predicts 6504 protein-coding sequences. It contains abundant functional genes related to nutrient conversion (phosphate solubilization, sulfur metabolism, zinc solubilization, siderophore production), plant hormone regulation (indole-3-acetic acid secretion, ACC deaminase production), phenolic acid degradation, root colonization, heavy metal tolerance, pathogen antagonism, and the production of antagonistic secondary metabolites. Additionally, strain YIM B08401 can specifically bind to Cd²⁺ through various functional groups on the cell surface, such as C-O-C, P=O, and O-H, enabling biosorption. In conclusion, strain YIM B08401 is an excellent strain with plant-growth-promoting, disease-resistant, and bioremediation capabilities, warranting further development as a biofertilizer for agricultural applications to promote green and sustainable agricultural development. Full article

Cytokinins, plant hormones derived from adenine, are best known for regulating growth and stress responses in plants. Recent findings suggest they may also influence microbial viability, yet their direct antimicrobial potential remains underexplored. This study evaluates the antimicrobial activities of four natural cytokinins (iPA, B, K, and p-T) and their N⁹-ribosides (iPAR, BR, KR, and p-TR) against selected human pathogens. Using the broth microdilution method, we assessed their effects on Gram-positive and Gram-negative bacteria, as well as fungal strains. While Gram-negative species showed no susceptibility, all tested compounds exhibited bacteriostatic activity against Bacillus subtilis and Enterococcus faecalis. Most notably, kinetin (K) and kinetin riboside (KR) displayed strong antifungal activity against Candida albicans, with MIC values comparable to the reference drug nystatin. Molecular docking studies supported these findings by showing that K and KR form favorable interactions with two validated antifungal targets in Candida albicans: secreted aspartic proteinase 3 (SAP3) and dihydrofolate reductase (DHFR). This is, to our knowledge, the first report linking natural cytokinins to direct antifungal action against C. albicans supported by in silico evidence. These findings highlight the potential of K and KR as promising leads for the development of cytokinin-based antifungal agents. Full article

Background: The GhA01EP1 gene in upland cotton encodes an epidermal-specific secreted glycoprotein, whose functional characterization remains unexplored beyond our initial discovery of its water deficit resistance association. Therefore, we further designed experiments to investigate the functional role of GhA01EP1. Methods: We sequenced and analyzed the transcriptomes of wild-type (Col-0) and GhA01EP1-transgenic Arabidopsis thaliana. The differences in morphological and biochemical indicators were examined. In addition, the proteins interacting with GhA01EP1 in Arabidopsis were screened using a glutathione-S-transferase pull-down assay. Results: The GhA01EP1-transgenic Arabidopsis plants flowered earlier, produced more branches, and had a higher seed yield than Col-0. Transcriptome analysis revealed that differentially expressed genes detected in the comparison of GhA01EP1-transgenic and Col-0 Arabidopsis under the water treatment (the control) were associated especially with circadian rhythm regulation, photoperiodic flowering reaction, hormone metabolism, glyoxalase I synthesis, antioxidant pathway, branching development, and carbon-nitrogen allocation. Under water-sufficient or water-deficient treatments, the glyoxalase I activity and lignin content of GhA01EP1-transgenic Arabidopsis were significantly higher. Under water deficit stress, the malondialdehyde and starch contents were significantly lower, while peroxidase activity and protein content were significantly higher than those of Col-0. Conclusions: GhA01EP1 synergistically improved the precocity, water deficit tolerance, and seed yield of GhA01EP1-transgenic Arabidopsis. Analysis of GhA01EP1 function provides a molecular basis for breeding improved cotton varieties. Full article

Plant growth-promoting bacteria (PGPB) are free-living microorganisms that actively reside in the rhizosphere and affect plant growth and development. These bacteria employ their own metabolic system to fix nitrogen, solubilize phosphate, and secrete hormones to directly impact the metabolism of plants. Generating sustainable agricultural production under various environmental stresses requires a detailed understanding of mechanisms that bacteria use to promote plant growth. In the present study, Pseudomonas aeruginosa (MW843625), a PGP soil bacterium with a minimum inhibitory concentration (MIC) of 150 mM against fluoride (F), was isolated from agricultural fields of Chhattisgarh, India, and was assessed for remedial and PGP potential. This study concentrated on biomass accumulation, nutrient absorption, and oxidative stress tolerance in plants involving antioxidative enzymes. By determining MDA accumulation and ROS (O₂•⁻ and H₂O₂) in Oryza sativa L. under F (50 ppm) stress, oxidative stress tolerance was assessed. The results showed that inoculation with P. aeruginosa enhanced the ability of O. sativa L. seedlings to absorb nutrients and increased the amounts of total chlorophyll (Chl), total soluble protein, and biomass. In contrast to plants cultivated under F-stress alone, those inoculated with P. aeruginosa along with F showed considerably reduced concentrations of F in their roots, shoots, and grains. The alleviation of deleterious effects of F-stress on plants owing to P. aeruginosa inoculation has been associated with improved activity/upregulation of antioxidative genes (SOD, CAT, and APX) in comparison to only F-subjected plants, which resulted in lower O₂•⁻, H₂O₂, and MDA content. Additionally, it has also been reflected from our study that P. aeruginosa has the potential to increase the activities of soil enzymes such as urease, phosphatase, dehydrogenase, nitrate reductase, and cellulase. Accordingly, the findings of the conducted study suggest that P. aeruginosa can be exploited not only as an ideal candidate for bioremediation but also for enhancing soil fertility and the promotion of growth and development of O. sativa L. under F contamination. Full article

Background/Objectives: Long-term spaceflight in a microgravity environment frequently results in gastrointestinal dysfunction, presenting substantial challenges to astronauts’ health. Hericium erinaceus, a plant recognized for its dual use as food and medicine, contains a key functional component called Hericium erinaceus polysaccharide (HEP), which is purported to promote gastrointestinal health. This study aims to investigate the protective effects of HEP against gastrointestinal disturbances induced by simulated weightlessness and to elucidate its regulatory mechanisms. Methods: Sprague Dawley rats subjected to a tail suspension model were administered either a standard diet or a diet supplemented with 0.125% HEP over a period of 4 weeks (the intake of HEP is approximately 157.5 mg/kg bw/d, n = 8), metagenomics and targeted metabolomics to investigate the effects of HEP on gastrointestinal hormone secretion disorders, gut microbiota dysbiosis, and intestinal barrier damage induced by simulated weightlessness. Results: Dietary supplementation with HEP was observed to significantly alleviate weightlessness-induced gastrointestinal hormone disruptions, enhancing motility and intestinal barrier function while reducing inflammation. In addition, HEP improved gut microbiota by boosting beneficial bacteria as Oscillibacter sp.1-3, Firmicutes bacterium ASF500, and Lactobacillus reuteri, while reducing harmful bacteria like Escherichia coli and Mucispirillum schaedleri at the species level. Furthermore, HEP altered the serum metabolic profile of the rats, reducing inflammation by upregulating the tryptophan metabolism pathway and enhancing the production of short-chain fatty acids. Conclusions: HEP effectively protects against gastrointestinal dysfunction induced by simulated weightlessness by regulating hormone secretion and maintaining intestinal homeostasis. Full article

Melatonin is a natural hormone synthesized mainly by the pineal gland of vertebrates, and, secondarily, by other tissues and organs as well. It is deemed a bioactive molecule due to the multiple roles and functions it performs in animals and humans. Research conducted up to 2024 has reported the presence of melatonin in a wide variety of plants and bacteria, as well. This review aims to collect some of the scientific data to identify and describe the main sources of melatonin, and to document the functions and roles it plays in animal organisms. It also includes a description of the main technological and nutritional factors that can positively or negatively influence the synthesis and secretion process of melatonin, which is subsequently transported from the animal body into some food products, such as milk. This paper also includes information on the interaction between melatonin and other bioactive compounds present in animal and human bodies, with the aim of identifying what other functions and roles this hormone performs, and whether it interacts with other substances present in the vertebrate organism. Full article

Plants require adequate water for growth, development, and reproduction. Peptides play a key role in plant growth and development and act in a similar manner to plant hormones. However, only a few peptides have been identified to play a role in abiotic stress tolerance in potato. In this study, we identified fourteen members of the epidermal patterning factor (EPF) family in potato, which were designated as StEPF1-14 according to their chromosomal locations. We also conducted a comprehensive analysis of their chromosomal distribution, gene structures, physicochemical properties, phylogenetic relationships, and tissue-specific expression patterns. RT-qPCR analysis revealed that the StEPF4 gene is significantly induced by drought stress, suggesting its potential role as a negative regulator in the plant’s response to drought. Furthermore, multiple cis-regulatory elements associated with drought-responsive regulation were identified within the promoter region of the StEPF genes. Here, we isolated an EPF secreted Cys-rich small peptide StEPF4 from ‘Atlantic’ and explored its mechanism in plant response to drought stress. We found that StEPF4 was greatly induced by dehydration treatment in potato. To investigate its potential biological functions, StEPF4 was knocked down in potato. The StEPF4 knocked down lines (KdStEPF4) significantly decreased stomatal density, resulting in a decrease in the transpiration rate. KdStEPF4 lines maintained a higher photosynthetic rate and lowered the water loss rate of leaves compared with the control, resulting in increased drought resistance. Taken together, this study provides detailed information about StEPFs, and our findings also show that StEPF4 plays an essential role in regulating drought resistance by reducing stomatal density in potato. Full article

Cotton is often threatened by Verticillium wilt caused by V. dahliae. Understanding the molecular mechanism of V. dahlia–cotton interaction is important for the prevention of this disease. To analyze the transcriptome profiles in V. dahliae and cotton simultaneously, the strongly pathogenic strain Vd592 was inoculated into cotton, and the infected cotton roots at 36 h and 3 d post infection were subjected to dual RNA-seq analysis. For the V. dahliae, transcriptomic analysis identified 317 differentially expressed genes (DEGs) encoding classical secreted proteins, which were up-regulated at least at one time point during infection. The 317 DEGs included 126 carbohydrate-active enzyme (CAZyme) and 108 small cysteine-rich protein genes. A pectinesterase gene (VDAG_01782) belonging to CAZyme, designated as VdPE1, was selected for functional validation. VdPE1 silencing by HIGS (host-induced gene silencing) resulted in reduced disease symptoms and the increased resistance of cotton to V. dahliae. For the cotton, transcriptomic analysis found that many DEGs involved in well-known disease resistance pathways (flavonoid biosynthesis, plant hormone signaling, and plant–pathogen interaction) as well as PTI (pattern-triggered immunity) and ETI (effector-triggered immunity) processes were significantly down-regulated in infected cotton roots. The dual RNA-seq data thus potentially connected the genes encoding secreted proteins to the pathogenicity of V. dahliae, and the genes were involved in some disease resistance pathways and PTI and ETI processes for the susceptibility of cotton to V. dahliae. These findings are helpful in the further characterization of candidate genes and breeding resistant cotton varieties via genetic engineering. Full article

Propolis is a sticky substance produced by honeybees (Apis mellifera) through the collection of plant resins, which they mix with secretions from their palate and wax glands. Propolis can inhibit tumor invasion and metastasis, thereby reducing the proliferation of tumor cells and inducing cell apoptosis. Previous research has shown that propolis has an inhibitory effect on skin squamous cell carcinoma A431 cells. Nevertheless, its inhibitory mechanism is unclear because of many significantly different Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways between the ethanol extract of the propolis (EEP) group and the control group of cells. In this study, the main components of EEP and the antitumor mechanism at an IC₅₀ of 29.04 μg/mL EEP were determined via untargeted metabolomics determined using ultra high-performance liquid chromatography tandem mass spectrometry (UHPLC‒MS/MS), respectively. The results revealed 43 polyphenolic components in the EEP and 1052 metabolites, with 160 significantly upregulated and 143 significantly downregulated metabolites between cells treated with EEP and solvent. The KEGG enrichment results revealed that EEP significantly inhibited A431 cell proliferation via the steroid hormone biosynthesis and linoleic acid metabolism pathways. These findings may provide valuable insights for the development of targeted therapies for the treatment of cutaneous squamous cell carcinoma. Full article

Rice allelopathy is a natural method of weed control that is regarded as an eco-friendly practice in agroecology. The root growth of allelopathic rice at the seedling stage plays an important role in its weed control. Our study characterizes a plant hormone that promotes root growth, abscisic acid (ABA), to explore its role in the induction of rice allelopathy. Increasing the root morphology traits (root length, root tip number, and root biomass) in rice using different concentrations of exogenous ABA resulted in increased inhibitory ratios against barnyard grass (Echinochloa crus-galli), both in a hydroponic experiment and pot test. In particular, the relative proportion of induced allelopathy to total allelopathy in non-allelopathic rice Lemont (Le) was higher than that in allelopathic rice PI31277 (PI). The total content of phenolic acid, which is an important allelochemical in rice, as previously reported, was significantly elevated in the root exudates of both PI and LE. The gene expression levels of OsPAL, OsC4H, and OsCOL related to phenolic acid synthesis were also up-regulated, with a higher regulatory fold in PI. ABA also increased the expression of OsKSL4 and CYP75B4 involved in the biosynthesis of momilactone B and tricin. Moreover, low concentrations of exogenous ABA mainly positively regulate the expression of OsIAA11, an AUX/IAA transcription factor gene, in the root of PI and Le. These findings suggest that the application of ABA could significantly enhance the weed-suppressive activity of both rice cultivars through regulating root growth and the synthesis of allelochemicals secreted by rice roots, providing an option for the improvement of rice allelopathy through chemical induction. Full article

This review aims to gain insight into the major causes of hair graying (canities) and how plant-derived extracts and phytochemicals could alleviate this symptom. Research articles on human hair graying were searched and selected using the PubMed, Web of Science, and Google Scholar databases. We first examined the intrinsic and extrinsic factors associated with hair graying, such as the reduced capacity of melanin synthesis and transfer, exhaustion of melanocyte stem cells (MSCs) and melanocytes, genetics and epigenetics, race, gender, family history, aging, oxidative stress, stress hormones, systematic disorders, nutrition, smoking, alcohol consumption, lifestyle, medications, and environmental factors. We also examined various plants and phytochemicals that have shown a potential to interfere with the onset or progression of human hair graying at different levels from in vitro studies to clinical studies: the extract of Polygonum multiflorum and its major components, 2,3,5,4′-tetrahydroxystilbene-2-O-β-D-glucoside and emodin; the extract of Eriodictyon angustifolium and its major flavonoid compounds, hydroxygenkwanin, sterubin, and luteolin; the extracts of Adzuki beans (Vigna angularis), Fuzhuan brick tea (Camellia sinensis), and Gynostemma pentaphyllum; bixin, a carotenoid compound found in Bixa orellana; and rhynchophylline, an alkaloid compound found in certain Uncaria species. Experimental evidence supports the notion that certain plant extracts and phytochemicals could alleviate hair graying by enhancing MSC maintenance or melanocyte function, reducing oxidative stress due to physiological and environmental influences, and managing the secretion and action of stress hormones to an appropriate level. It is suggested that hair graying may be reversible through the following tactical approaches: selective targeting of the p38 mitogen-activated protein kinase (MAPK)–microphthalmia-associated transcription factor (MITF) axis, nuclear factor erythroid 2-related factor 2 (NRF2), or the norepinephrine–β2 adrenergic receptor (β2AR)–protein kinase A (PKA) signaling pathway. Full article

Strawberry plants have shallow roots and large leaves, which are highly sensitive to variations in water levels. To explore the physicochemical and molecular mechanisms of strawberry response to water stress, and provide new ideas for strawberry scientific irrigation, we measured the transpiration rate, fresh weight, biomass gain, and other indicators of potted “Zhangji” strawberry plants under drought and waterlogging treatments using a Plantarray system. Transcriptomic and metabolomic analyses of strawberry leaves following mild drought, moderate drought, severe drought, and rehydration treatments were performed to identify key genes and metabolites involved in the response to drought stress. Below a certain threshold, the transpiration rate of strawberry plants was significantly lower after the deficit irrigation treatment than the conventional water treatment. Transcriptome analysis revealed that genes involved in oxidoreductase activity and in sulfur and nitrogen metabolism were up-regulated, as well as starch and sucrose. Strawberry plants secrete various endogenous growth hormones to maintain their normal growth under drought stress. The syntheses of salicylic acid (SA) and abscisic acid (ABA) were up-regulated in the mild and moderate drought treatments. However, the syntheses of 1-aminocyclopropanecarboxylic acid (ACC) and indole-3-acetic acid (IAA) were down-regulated in severe drought treatment and up-regulated in rehydration after severe drought treatment. Full article

Small peptides (SPs), ranging from 5 to 100 amino acids, play integral roles in plants due to their diverse functions. Despite their low abundance and small molecular weight, SPs intricately regulate critical aspects of plant life, including cell division, growth, differentiation, flowering, fruiting, maturation, and stress responses. As vital mediators of intercellular signaling, SPs have garnered significant attention in plant biology research. This comprehensive review delves into SPs’ structure, classification, and identification, providing a detailed understanding of their significance. Additionally, we summarize recent findings on the biological functions and signaling pathways of prominent SPs that regulate plant growth and development. This review also offers a perspective on future research directions in peptide signaling pathways. Full article