Search Results (10)

Climate change is becoming an important driver of biodiversity loss by altering the habitat, distribution and interspecific relationships of species. Japanese yew (Taxus cuspidata) is a first class protected plant in China, which has important ecological significance and occupies a certain position in the feeding habit of wapiti (Cervus elaphus) and Siberian roe deer (Capreolus pygargus). Due to human and animal damage, the number of Japanese yew has gradually decreased. Therefore, understanding the potential distribution of Japanese yew and the suitable areas for deer to browse on it under climate change will help to further protect these three species in Northeast China, especially migrate to more suitable areas in different scenarios in the future. From July 2021 to July 2024, we collected the information of species distribution and the variables associated with the species’ ecological limits in Muling National Nature Reserve to cross-reflect the current and future distribution and feeding area of the two species to assess each other’s impacts with Maximum entropy model (MaxEnt). The results showed that under the SSP2-4.5 and SSP5-8.5 scenarios, feeding pressure, driest quarter precipitation (BIO17) and seasonal temperature variation coefficient (BIO4) were the main variables affecting the distribution of Japanese yew, and the driest quarter precipitation (BIO17) and annual precipitation (BIO12) were the main variables affecting wapiti and Siberian roe deer foraging them. Under SSP2-4.5 and SSP5-8.5 scenarios, the suitable area of Japanese yew and the feeding area of the two species of deer gradually decreased from 2041 to 2100. Compared with wapiti, Siberian roe deer has a greater impact on the distribution range of Japanese yew, and the suitable feeding area is wider. It is expected that the potential centroid of Japanese yew, wapiti and Siberian roe deer will migrate to higher latitudes in the future. These findings provide a scientific basis for the reserve to develop relevant measures and plans and effectively protect the three species. Full article

Wild herbivore responses to anthropogenic climate change are often projected to be habitat and geographic range shifts as warmer conditions reduce the quantity and nutritional quality of forage plants, which makes species presence/absence a focus. Since 1978, herbivore abundances at the National Bison Range, MT, USA, were measured for grasshoppers (catch-effort), microtine rodents (runway density), and ungulates (drives and round-ups), along with climate and vegetation quantity (biomass) and quality (nitrogen content and chemical solubility related to digestibility). Counter to expectation with warming and drying, forage biomass increased as grass biomass increased more than dicot biomass decreased, and forage quality (solubility) increased. Consequently, herbivores that consume a grass diet (>25% grass: certain grasshoppers, microtines, bighorn sheep, elk, bison) increased in abundance, while herbivores consuming less grass declined (certain grasshoppers, pronghorn, whitetail, and mule deer). The result is an 18% increase in herbivore abundance and herbivory, counter to climate change expectations. Historically, grasshoppers consumed 46% more vegetation than mammals; now, they consume only 14% more, as grasshoppers did not increase as expected with climate change. Therefore, herbivores respond rapidly to climate-induced vegetation changes, and this is not a simple loss/addition of species, but changing trophic dynamics, which requires more knowledge of ecosystem dynamics. Full article

Quaking aspen (Populus tremuloides Michx.) landscapes are valued for their biodiversity, water retention, fire mitigation, aesthetics, and recreation opportunities. Across North America, some aspen populations are experiencing population declines as they face uninhibited ungulate browsing, drought, fire suppression, insects, disease, and inappropriate management. Increased human development and recreational use within aspen landscapes can serve as additive stressors, though there is a dearth of literature examining these elements. At a popular recreational area in Utah, USA, identifying the cause of apparent decline within a larger aspen community is complicated by development upstream and recreation-related activities. We sought to (1) assess the overall condition of the aspen at the site, (2) understand key variables that influence aspen conditions, and (3) elucidate how aspen fitness varies across the site. We collected data from forty-five plots using established aspen sampling methods, including ungulate presence, tree characteristics, soil chemistry, and environmental descriptors. Results suggest that a combination of higher levels of browsing and elevated soil sodium may be causing premature mortality and limiting aspen recruitment in a portion of the study area. These findings will inform future management at this site, as well as similar recreational forest settings experiencing compound stressors. Full article

Surveillance of endoparasites at the host community level is rarely reported for ungulates. Yet, changes in the composition and abundance of species in ungulate assemblages, coupled with environmental and climate change, bring into focus the need for baseline data on endoparasite occurrence in host species at the community level. We investigated the prevalence and intensity of eggs of endoparasites in feces of a dynamic boreal ungulate community in Yukon, Canada, that included reintroduced bison (Bison bison), as well as introduced elk (Cervus canadensis), naturally colonizing mule deer (Odocoileus hemionus), and resident populations of caribou (Rangifer tarandus), moose (Alces americanus), and thinhorn sheep (Ovis dalli). We also examined the change in endoparasite prevalence and intensity in bison fecal samples collected eight years apart. The prevalence of eggs detected in feces differed across species for most endoparasite groups. We also provide new records of several endoparasites in novel hosts or new geographic records. We detected a substantially greater prevalence and intensity of trichostrongyle-type eggs in bison feces between samples collected eight years apart. Our data emphasize the need for targeted pathogen surveillance programs to monitor the movement of various ungulate and associated endoparasites. This is particularly pertinent since our data potentially supports evidence for the continued northward expansion and host switching of protostrongylid species, which may have health implications for animals at a new interface. Full article

Nutrition underpins survival and reproduction in animal populations; reliable nutritional biomarkers are therefore requisites to understanding environmental drivers of population dynamics. Biomarkers vary in scope of inference and sensitivity, making it important to know what and when to measure to properly quantify biological responses. We evaluated the repeatability of three nutritional biomarkers in a large, iteroparous mammal to evaluate the level of intrinsic and extrinsic contributions to those traits. During a long-term, individual-based study in a highly variable environment, we measured body fat, body mass, and lean mass of mule deer (Odocoileus hemionus) each autumn and spring. Lean mass was the most repeatable biomarker (0.72 autumn; 0.61 spring), followed by body mass (0.64 autumn; 0.53 spring), and then body fat (0.22 autumn; 0.01 spring). High repeatability in body and lean mass likely reflects primary structural composition, which is conserved across seasons. Low repeatability of body fat supports that it is the primary labile source of energy that is largely a product of environmental contributions of the previous season. Based on the disparate levels in repeatability among nutritional biomarkers, we contend that body and lean mass are better indicators of nutritional legacies (e.g., maternal effects), whereas body fat is a direct and sensitive reflection of recent nutritional gains and losses. Full article

There is a demand for more progressive restoration directives to regenerate forest ecosystems impacted by harvesting, wildfire, insect outbreaks, and mineral resource extraction. Forest restoration may take many decades and even centuries without active silvicultural intervention to grow large trees that provide suitable habitat for various wildlife species. We tested the hypotheses (H) that, compared with unmanaged (unthinned and old-growth) stands, large-scale precommercial thinning (heavy thinning to <500 stems/ha) of young lodgepole pine (Pinus contorta var. latifolia), at 20–25 years post-treatment, would enhance: (H₁) the architecture of large overstory trees (e.g., diameter, height, and crown dimensions); (H₂) mean (i) total abundance and species diversity of forest-floor small mammals, (ii) abundance of tree squirrels; and (H₃) relative habitat use by mule deer (Odocoileus hemionus). There were three levels of thinning with mean densities of crop trees/ha: 353 (low), 712 (medium) and 1288 (high), an unthinned, and old-growth stand replicated at three areas in south-central British Columbia, Canada. Mammal abundance and habitat use were measured during the period 2013 to 2015. Mean diameter of crop trees was significantly different among stands with the low-density, medium-density, and old-growth stands having diameters larger than the high-density and unthinned stands. Mean height of crop trees was highest in the old-growth stands. Mean crown volume of crop trees was significantly different among stands with the low-density stands 2.1 to 5.8 times higher than the high-density, unthinned, and old-growth stands, and hence partial support for H₁. Mean total abundance of forest-floor small mammals was significantly different among stands with the low-density and old-growth stands 1.9 to 2.4 times higher than the other three treatment stands. Mean abundances per stand of the red squirrel (Tamiasciurus hudsonicus) (range of 4.8 to 12.0) and the northern flying squirrel (Glaucomys sabrinus) (range of 3.2 to 4.3) were similar among stands. Mean relative habitat use by mule deer was similar among stands, but variable with counts of pellet-groups/ha in the thinned stands were 3.8 to 4.2 and 2.1 to 2.3 times higher than the unthinned and old-growth stands, respectively. Thus, mean total abundance of forest-floor small mammals of H₂ was supported, but species diversity and abundance of tree squirrels was not. Enhanced relative habitat use by mule deer (H₃) was not supported. To our knowledge, this is the first concurrent measurement of several mammal species in heavily thinned, unthinned, and old-growth forest across three replicate study areas at 20–25 years post-treatment. Although not all mammal responses were significant, there was a strong indication that restored forests via heavy thinning (<500 trees/ha) produced large overstory trees (at least for diameter and crown dimensions) in stands 33 to 42 years old. Comparable old-growth stands, albeit with crop trees of greater height and merchantable volume, ranged from 120 to 167 years of age. Restored forests with large trees capable of supporting at least these mammal species may be achieved in decades rather than centuries. Full article

Migration is a valuable life history strategy for many species because it enables individuals to exploit spatially and temporally variable resources. Globally, the prevalence of species’ migratory behavior is decreasing as individuals forgo migration to remain resident year-round, an effect hypothesized to result from anthropogenic changes to landscape dynamics. Efforts to conserve and restore migrations require an understanding of the ecological characteristics driving the behavioral tradeoff between migration and residence. We identified migratory and resident behaviors of 42 mule deer (Odocoileus hemionus) based on GPS locations and correlated their locations to remotely sensed indicators of forage quality, land cover, snow cover, and human land use. The model classified mule deer seasonal migratory and resident niches with an overall accuracy of 97.8% and cross-validated accuracy of 81.2%. The distance to development was the most important variable in discriminating in which environments these behaviors occur, with resident niche space most often closer to developed areas than migratory niches. Additionally, snow cover in December was important for discriminating summer migratory niches. This approach demonstrates the utility of niche analysis based on remotely sensed environmental datasets and provides empirical evidence of human land use impacts on large-scale wildlife migrations. Full article

Since chronic wasting disease (CWD) was first identified nearly 50 years ago in a captive mule deer herd in the Rocky Mountains of the United States, it has slowly spread across North America through the natural and anthropogenic movement of cervids and their carcasses. As the endemic areas have expanded, so has the need for rapid, sensitive, and cost effective diagnostic tests—especially those which take advantage of samples collected antemortem. Over the past two decades, strategies have evolved from the recognition of microscopic spongiform pathology and associated immunohistochemical staining of the misfolded prion protein to enzyme-linked immunoassays capable of detecting the abnormal prion conformer in postmortem samples. In a history that parallels the diagnosis of more conventional infectious agents, both qualitative and real-time amplification assays have recently been developed to detect minute quantities of misfolded prions in a range of biological and environmental samples. With these more sensitive and semi-quantitative approaches has come a greater understanding of the pathogenesis and epidemiology of this disease in the native host. Because the molecular pathogenesis of prion protein misfolding is broadly analogous to the misfolding of other pathogenic proteins, including Aβ and α-synuclein, efforts are currently underway to apply these in vitro amplification techniques towards the diagnosis of Alzheimer’s disease, Parkinson’s disease, and other proteinopathies. Chronic wasting disease—once a rare disease of Colorado mule deer—now represents one of the most prevalent prion diseases, and should serve as a model for the continued development and implementation of novel diagnostic strategies for protein misfolding disorders in the natural host. Full article

Endogenous retroviruses (ERVs) are a class of transposable elements found in all vertebrate genomes that contribute substantially to genomic functional and structural diversity. A host species acquires an ERV when an exogenous retrovirus infects a germ cell of an individual and becomes part of the genome inherited by viable progeny. ERVs that colonized ancestral lineages are fixed in contemporary species. However, in some extant species, ERV colonization is ongoing, which results in variation in ERV frequency in the population. To study the consequences of ERV colonization of a host genome, methods are needed to assign each ERV to a location in a species’ genome and determine which individuals have acquired each ERV by descent. Because well annotated reference genomes are not widely available for all species, de novo clustering approaches provide an alternative to reference mapping that are insensitive to differences between query and reference and that are amenable to mobile element studies in both model and non-model organisms. However, there is substantial uncertainty in both identifying ERV genomic position and assigning each unique ERV integration site to individuals in a population. We present an analysis suitable for detecting ERV integration sites in species without the need for a reference genome. Our approach is based on improved de novo clustering methods and statistical models that take the uncertainty of assignment into account and yield a probability matrix of shared ERV integration sites among individuals. We demonstrate that polymorphic integrations of a recently identified endogenous retrovirus in deer reflect contemporary relationships among individuals and populations. Full article

In 2000, Mexico’s National Commission of Protected Areas (CONANP) was created to encourage the protection, management and restoration of natural and cultural resources and their conservation. Protected areas were recently increased by more than 3 million hectares, for a current total of more than 25 million hectares, corresponding to 174 protected areas that cover 12.90% of the country’s surface area. The information obtained by research helps us understand both biodiversity and ecological processes, as well as the social and economic phenomena that influence the use of ecosystems. In Mexico there are four species of deer: white-tailed deer, mule deer, red brocket and brown brocket. These ungulates have been an important part of the diet of indigenous people and rural communities, and represent an important resource for sport and trophy hunting. We found the best deer populations in protected areas; these can therefore maintain the gene pool and serve as source populations for other areas. These populations are also useful from a research perspective. People living in some protected areas continue to use natural resources such as deer, and also receive economic inputs to develop ecotourism programs, and support from the government for the environmental services derived from conserving biodiversity. Full article