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Keywords = microbats

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16 pages, 3808 KB  
Article
Endogenous Bornavirus-like Elements in Bats: Evolutionary Insights from the Conserved Riboviral L-Gene in Microbats and Its Antisense Transcription in Myotis daubentonii
by Muriel Ritsch, Tom Eulenfeld, Kevin Lamkiewicz, Andreas Schoen, Friedemann Weber, Martin Hölzer and Manja Marz
Viruses 2024, 16(8), 1210; https://doi.org/10.3390/v16081210 - 27 Jul 2024
Cited by 1 | Viewed by 1499
Abstract
Bats are ecologically diverse vertebrates characterized by their ability to host a wide range of viruses without apparent illness and the presence of numerous endogenous viral elements (EVEs). EVEs are well preserved, expressed, and may affect host biology and immunity, but their role [...] Read more.
Bats are ecologically diverse vertebrates characterized by their ability to host a wide range of viruses without apparent illness and the presence of numerous endogenous viral elements (EVEs). EVEs are well preserved, expressed, and may affect host biology and immunity, but their role in bat immune system evolution remains unclear. Among EVEs, endogenous bornavirus-like elements (EBLs) are bornavirus sequences integrated into animal genomes. Here, we identified a novel EBL in the microbat Myotis daubentonii, EBLL-Cultervirus.10-MyoDau (short name is CV.10-MyoDau) that shows protein-level conservation with the L-protein of a Cultervirus (Wuhan sharpbelly bornavirus). Surprisingly, we discovered a transcript on the antisense strand comprising three exons, which we named AMCR-MyoDau. The active transcription in Myotis daubentonii tissues of AMCR-MyoDau, confirmed by RNA-Seq analysis and RT-PCR, highlights its potential role during viral infections. Using comparative genomics comprising 63 bat genomes, we demonstrate nucleotide-level conservation of CV.10-MyoDau and AMCR-MyoDau across various bat species and its detection in 22 Yangochiropera and 12 Yinpterochiroptera species. To the best of our knowledge, this marks the first occurrence of a conserved EVE shared among diverse bat species, which is accompanied by a conserved antisense transcript. This highlights the need for future research to explore the role of EVEs in shaping the evolution of bat immunity. Full article
(This article belongs to the Special Issue Antiviral Immune Responses of Bat)
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10 pages, 2572 KB  
Article
Characterization and Comparison of Ocular Surface Microbiome in Newborns
by Francesco Petrillo, Arianna Petrillo, Maddalena Marrapodi, Carlo Capristo, Maria Francesca Gicchino, Paolo Montaldo, Elisabetta Caredda, Michele Reibaldi, Lara M. V. Boatti, Federica Dell’Annunziata, Veronica Folliero and Marilena Galdiero
Microorganisms 2022, 10(7), 1390; https://doi.org/10.3390/microorganisms10071390 - 10 Jul 2022
Cited by 9 | Viewed by 2919
Abstract
The ocular microbiome is of fundamental importance for immune eye homeostasis, and its alteration would lead to an impairment of ocular functionality. Little evidence is reported on the composition of the ocular microbiota of term infants and on the impact of antibiotic prophylaxis. [...] Read more.
The ocular microbiome is of fundamental importance for immune eye homeostasis, and its alteration would lead to an impairment of ocular functionality. Little evidence is reported on the composition of the ocular microbiota of term infants and on the impact of antibiotic prophylaxis. Methods: A total of 20 conjunctival swabs were collected from newborns at birth and after antibiotic treatment. Samples were subjected to 16S rRNA sequencing via system MiSeq Illumina. The data were processed with the MicrobAT software and statistical analysis were performed using two-way ANOVA. Results: Antibiotic prophylaxis with gentamicin altered the composition of the microbiota. In detail, a 1.5- and 2.01-fold reduction was recorded for Cutibacterium acnes (C. acnes) and Massilia timonae (M. timonae), respectively, whereas an increase in Staphylococcus spp. of 6.5 times occurred after antibiotic exposure. Conclusions: Antibiotic prophylaxis altered the ocular microbiota whose understanding could avoid adverse effects on eye health. Full article
(This article belongs to the Special Issue Ocular Infections and Microbiota in Health and Disease)
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19 pages, 2344 KB  
Article
Tolerance and Persistence of Ebola Virus in Primary Cells from Mops condylurus, a Potential Ebola Virus Reservoir
by Marcel Bokelmann, Uwe Vogel, Franka Debeljak, Ariane Düx, Silke Riesle-Sbarbaro, Angelika Lander, Annette Wahlbrink, Nicole Kromarek, Stuart Neil, Emmanuel Couacy-Hymann, Joseph Prescott and Andreas Kurth
Viruses 2021, 13(11), 2186; https://doi.org/10.3390/v13112186 - 29 Oct 2021
Cited by 8 | Viewed by 4127
Abstract
Although there have been documented Ebola virus disease outbreaks for more than 40 years, the natural reservoir host has not been identified. Recent studies provide evidence that the Angolan free-tailed bat (Mops condylurus), an insectivorous microbat, is a possible ebolavirus reservoir. [...] Read more.
Although there have been documented Ebola virus disease outbreaks for more than 40 years, the natural reservoir host has not been identified. Recent studies provide evidence that the Angolan free-tailed bat (Mops condylurus), an insectivorous microbat, is a possible ebolavirus reservoir. To investigate the potential role of this bat species in the ecology of ebolaviruses, replication, tolerance, and persistence of Ebola virus (EBOV) were investigated in 10 different primary bat cell isolates from M. condylurus. Varying EBOV replication kinetics corresponded to the expression levels of the integral membrane protein NPC1. All primary cells were highly tolerant to EBOV infection without cytopathic effects. The observed persistent EBOV infection for 150 days in lung primary cells, without resultant selective pressure leading to virus mutation, indicate the intrinsic ability of EBOV to persist in this bat species. These results provide further evidence for this bat species to be a likely reservoir of ebolaviruses. Full article
(This article belongs to the Special Issue Host Diversity and Responses to Bat-Associated Viruses)
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12 pages, 1273 KB  
Brief Report
Phenotypic Divergence of P Proteins of Australian Bat Lyssavirus Lineages Circulating in Microbats and Flying Foxes
by Celine Deffrasnes, Meng-Xiao Luo, Linda Wiltzer-Bach, Cassandra T. David, Kim G. Lieu, Lin-Fa Wang, David A. Jans, Glenn A. Marsh and Gregory W. Moseley
Viruses 2021, 13(5), 831; https://doi.org/10.3390/v13050831 - 4 May 2021
Cited by 6 | Viewed by 3179
Abstract
Bats are reservoirs of many pathogenic viruses, including the lyssaviruses rabies virus (RABV) and Australian bat lyssavirus (ABLV). Lyssavirus strains are closely associated with particular host reservoir species, with evidence of specific adaptation. Associated phenotypic changes remain poorly understood but are likely to [...] Read more.
Bats are reservoirs of many pathogenic viruses, including the lyssaviruses rabies virus (RABV) and Australian bat lyssavirus (ABLV). Lyssavirus strains are closely associated with particular host reservoir species, with evidence of specific adaptation. Associated phenotypic changes remain poorly understood but are likely to involve phosphoprotein (P protein), a key mediator of the intracellular virus–host interface. Here, we examine the phenotype of P protein of ABLV, which circulates as two defined lineages associated with frugivorous and insectivorous bats, providing the opportunity to compare proteins of viruses adapted to divergent bat species. We report that key functions of P protein in the antagonism of interferon/signal transducers and activators of transcription 1 (STAT1) signaling and the capacity of P protein to undergo nuclear trafficking differ between lineages. Molecular mapping indicates that these differences are functionally distinct and appear to involve modulatory effects on regulatory regions or structural impact rather than changes to defined interaction sequences. This results in partial but significant phenotypic divergence, consistent with “fine-tuning” to host biology, and with potentially distinct properties in the virus–host interface between bat families that represent key zoonotic reservoirs. Full article
(This article belongs to the Special Issue Lyssaviruses and Other Bat Rhabdoviruses)
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21 pages, 3536 KB  
Article
Viral Diversity of Microbats within the South West Botanical Province of Western Australia
by Diana Prada, Victoria Boyd, Michelle L. Baker, Mark O’Dea and Bethany Jackson
Viruses 2019, 11(12), 1157; https://doi.org/10.3390/v11121157 - 13 Dec 2019
Cited by 22 | Viewed by 6619
Abstract
Bats are known reservoirs of a wide variety of viruses that rarely result in overt clinical disease in the bat host. However, anthropogenic influences on the landscape and climate can change species assemblages and interactions, as well as undermine host-resilience. The cumulative result [...] Read more.
Bats are known reservoirs of a wide variety of viruses that rarely result in overt clinical disease in the bat host. However, anthropogenic influences on the landscape and climate can change species assemblages and interactions, as well as undermine host-resilience. The cumulative result is a disturbance of bat–pathogen dynamics, which facilitate spillover events to sympatric species, and may threaten bat communities already facing synergistic stressors through ecological change. Therefore, characterisation of viral pathogens in bat communities provides important basal information to monitor and predict the emergence of diseases relevant to conservation and public health. This study used targeted molecular techniques, serological assays and next generation sequencing to characterise adenoviruses, coronaviruses and paramyxoviruses from 11 species of insectivorous bats within the South West Botanical Province of Western Australia. Phylogenetic analysis indicated complex ecological interactions including virus–host associations, cross-species infections, and multiple viral strains circulating concurrently within selected bat populations. Additionally, we describe the entire coding sequences for five alphacoronaviruses (representing four putative new species), and one novel adenovirus. Results indicate that viral burden (both prevalence and richness) is not homogeneous among species, with Chalinolobus gouldii identified as a key epidemiological element within the studied communities. Full article
(This article belongs to the Section Animal Viruses)
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21 pages, 5742 KB  
Article
A Systematic Error Compensation Method Based on an Optimized Extreme Learning Machine for Star Sensor Image Centroid Estimation
by Xin Wei, Desheng Wen, Zongxi Song, Jiangbo Xi, Weikang Zhang, Gang Liu and Zhixin Li
Appl. Sci. 2019, 9(22), 4751; https://doi.org/10.3390/app9224751 - 7 Nov 2019
Cited by 6 | Viewed by 2550
Abstract
As an important error in star centroid location estimation, the systematic error greatly restricts the accuracy of the three-axis attitude supplied by a star sensor. In this paper, an analytical study about the behavior of the systematic error in the center of mass [...] Read more.
As an important error in star centroid location estimation, the systematic error greatly restricts the accuracy of the three-axis attitude supplied by a star sensor. In this paper, an analytical study about the behavior of the systematic error in the center of mass (CoM) centroid estimation method under different Gaussian widths of starlight energy distribution is presented by means of frequency field analysis and numerical simulations. Subsequently, an optimized extreme learning machine (ELM) based on the bat algorithm (BA) is adopted to predict the systematic error of the actual star centroid position and then compensate the systematic error from the CoM method. In the BA-ELM model, the input weights matrix and hidden layer biases parameters are encoded as microbat’s locations and optimized by utilizing the strong global search capacity of BA, which significantly improves the performance of ELM in terms of prediction accuracy. The simulation result indicates that our method can reduce the systematic error to less than 3.0 × 10−7 pixels, and its compensation accuracy is two or three orders of magnitude higher than that of other methods for estimating a star centroid location under a 3 × 3 pixel sampling window. Full article
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11 pages, 720 KB  
Brief Report
Hypsugopoxvirus: A Novel Poxvirus Isolated from Hypsugo savii in Italy
by Davide Lelli, Antonio Lavazza, Alice Prosperi, Enrica Sozzi, Francesca Faccin, Laura Baioni, Tiziana Trogu, Gian Luca Cavallari, Matteo Mauri, Anna Maria Gibellini, Chiara Chiapponi and Ana Moreno
Viruses 2019, 11(6), 568; https://doi.org/10.3390/v11060568 - 19 Jun 2019
Cited by 11 | Viewed by 4752
Abstract
Interest in bat-related viruses has increased considerably during the last decade, leading to the discovery of a rising number of new viruses in several bat species. Poxviridae are a large, diverse family of DNA viruses that can infect a wide range of vertebrates [...] Read more.
Interest in bat-related viruses has increased considerably during the last decade, leading to the discovery of a rising number of new viruses in several bat species. Poxviridae are a large, diverse family of DNA viruses that can infect a wide range of vertebrates and invertebrates. To date, only a few documented detections of poxviruses have been described in bat populations on three different continents (America, Africa, and Australia). These viruses are phylogenetically dissimilar and have diverse clinical impacts on their hosts. Herein, we report the isolation, nearly complete genome sequencing, and annotation of a novel poxvirus detected from an insectivorous bat (Hypsugo savii) in Northern Italy. The virus is tentatively named Hypsugopoxvirus (HYPV) after the bat species from which it was isolated. The nearly complete genome size is 166,600 nt and it encodes 161 genes. Genome analyses suggest that HYPV belongs to the Chordopoxvirinae subfamily, with the highest nucleotide identity (85%) to Eptesipoxvirus (EPTV) detected from a microbat Eptesicus fuscus in WA, USA, in 2011. To date, HYPV represents the first poxvirus detected in bats in Europe; thus, its viral ecology and disease associations should be investigated further. Full article
(This article belongs to the Special Issue Viruses and Bats 2019)
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9 pages, 1195 KB  
Article
Insights into Australian Bat Lyssavirus in Insectivorous Bats of Western Australia
by Diana Prada, Victoria Boyd, Michelle Baker, Bethany Jackson and Mark O’Dea
Trop. Med. Infect. Dis. 2019, 4(1), 46; https://doi.org/10.3390/tropicalmed4010046 - 11 Mar 2019
Cited by 14 | Viewed by 5813
Abstract
Australian bat lyssavirus (ABLV) is a known causative agent of neurological disease in bats, humans and horses. It has been isolated from four species of pteropid bats and a single microbat species (Saccolaimus flaviventris). To date, ABLV surveillance has primarily been [...] Read more.
Australian bat lyssavirus (ABLV) is a known causative agent of neurological disease in bats, humans and horses. It has been isolated from four species of pteropid bats and a single microbat species (Saccolaimus flaviventris). To date, ABLV surveillance has primarily been passive, with active surveillance concentrating on eastern and northern Australian bat populations. As a result, there is scant regional ABLV information for large areas of the country. To better inform the local public health risks associated with human-bat interactions, this study describes the lyssavirus prevalence in microbat communities in the South West Botanical Province of Western Australia. We used targeted real-time PCR assays to detect viral RNA shedding in 839 oral swabs representing 12 species of microbats, which were sampled over two consecutive summers spanning 2016–2018. Additionally, we tested 649 serum samples via Luminex® assay for reactivity to lyssavirus antigens. Active lyssavirus infection was not detected in any of the samples. Lyssavirus antibodies were detected in 19 individuals across six species, with a crude prevalence of 2.9% (95% CI: 1.8–4.5%) over the two years. In addition, we present the first records of lyssavirus exposure in two Nyctophilus species, and Falsistrellus mackenziei. Full article
(This article belongs to the Special Issue One Health and Zoonoses)
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15 pages, 4876 KB  
Article
A Comparative Assessment of Predicting Daily Solar Radiation Using Bat Neural Network (BNN), Generalized Regression Neural Network (GRNN), and Neuro-Fuzzy (NF) System: A Case Study
by Mohammad Mehdi Lotfinejad, Reza Hafezi, Majid Khanali, Seyed Sina Hosseini, Mehdi Mehrpooya and Shahaboddin Shamshirband
Energies 2018, 11(5), 1188; https://doi.org/10.3390/en11051188 - 8 May 2018
Cited by 49 | Viewed by 6304
Abstract
Highly accurate estimating of daily solar radiation by developing an intelligent and robust model has been a subject of prominent concern for many researchers in the past few years. The precise prediction of solar radiation is of great interest and importance to improve [...] Read more.
Highly accurate estimating of daily solar radiation by developing an intelligent and robust model has been a subject of prominent concern for many researchers in the past few years. The precise prediction of solar radiation is of great interest and importance to improve the incorporation of solar power plants. In this study, a novel multilayer framework for a particular combination of the bat algorithm (BA) and neural networks (NN) is proposed, which is called bat neural network (BNN), aimed at predicting daily solar radiation over Iran. For appraising the performance of the proposed BNN, daily solar radiation data from four cities of Iran including Jask, Kermanshah, Ramsar, and Tehran are analyzed. The results indicate that among the tested models, BNN gains the best performance in the prediction of daily solar radiation. Among various soft computing approaches, the BA, which is inspired by the nature of microbats’ behaviour, has a significant impact on the optimization of this study. Full article
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18 pages, 485 KB  
Review
Recent Observations on Australian Bat Lyssavirus Tropism and Viral Entry
by Dawn L. Weir, Edward J. Annand, Peter A. Reid and Christopher C. Broder
Viruses 2014, 6(2), 909-926; https://doi.org/10.3390/v6020909 - 19 Feb 2014
Cited by 22 | Viewed by 13340
Abstract
Australian bat lyssavirus (ABLV) is a recently emerged rhabdovirus of the genus lyssavirus considered endemic in Australian bat populations that causes a neurological disease in people indistinguishable from clinical rabies. There are two distinct variants of ABLV, one that circulates in frugivorous bats [...] Read more.
Australian bat lyssavirus (ABLV) is a recently emerged rhabdovirus of the genus lyssavirus considered endemic in Australian bat populations that causes a neurological disease in people indistinguishable from clinical rabies. There are two distinct variants of ABLV, one that circulates in frugivorous bats (genus Pteropus) and the other in insectivorous microbats (genus Saccolaimus). Three fatal human cases of ABLV infection have been reported, the most recent in 2013, and each manifested as acute encephalitis but with variable incubation periods. Importantly, two equine cases also arose recently in 2013, the first occurrence of ABLV in a species other than bats or humans. Similar to other rhabdoviruses, ABLV infects host cells through receptor-mediated endocytosis and subsequent pH-dependent fusion facilitated by its single fusogenic envelope glycoprotein (G). Recent studies have revealed that proposed rabies virus (RABV) receptors are not sufficient to permit ABLV entry into host cells and that the unknown receptor is broadly conserved among mammalian species. However, despite clear tropism differences between ABLV and RABV, the two viruses appear to utilize similar endocytic entry pathways. The recent human and horse infections highlight the importance of continued Australian public health awareness of this emerging pathogen. Full article
(This article belongs to the Section Animal Viruses)
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