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4,153 Results Found

  • Review
  • Open Access
21 Citations
10,259 Views
29 Pages

Living Cell Microarrays: An Overview of Concepts

  • Rebecca Jonczyk,
  • Tracy Kurth,
  • Antonina Lavrentieva,
  • Johanna-Gabriela Walter,
  • Thomas Scheper and
  • Frank Stahl

Living cell microarrays are a highly efficient cellular screening system. Due to the low number of cells required per spot, cell microarrays enable the use of primary and stem cells and provide resolution close to the single-cell level. Apart from a...

  • Review
  • Open Access
9 Citations
10,665 Views
18 Pages

Up-to-Date Applications of Microarrays and Their Way to Commercialization

  • Sarah Schumacher,
  • Sandra Muekusch and
  • Harald Seitz

23 April 2015

This review addresses up-to-date applications of Protein Microarrays. Protein Microarrays play a significant role in basic research as well as in clinical applications and are applicable in a lot of fields, e.g., DNA, proteins and small molecules. Ad...

  • Review
  • Open Access
34 Citations
12,065 Views
19 Pages

16 December 2010

Protein microarrays are powerful tools that are widely used in systems biology research. For infectious diseases, proteome microarrays assembled from proteins of pathogens will play an increasingly important role in discovery of diagnostic markers, v...

  • Review
  • Open Access
12 Citations
8,526 Views
24 Pages

Assessing Bacterial Interactions Using Carbohydrate-Based Microarrays

  • Andrea Flannery,
  • Jared Q. Gerlach,
  • Lokesh Joshi and
  • Michelle Kilcoyne

10 December 2015

Carbohydrates play a crucial role in host-microorganism interactions and many host glycoconjugates are receptors or co-receptors for microbial binding. Host glycosylation varies with species and location in the body, and this contributes to species s...

  • Review
  • Open Access
43 Citations
9,847 Views
18 Pages

Aptamer Microarrays—Current Status and Future Prospects

  • Martin Witt,
  • Johanna-Gabriela Walter and
  • Frank Stahl

24 March 2015

Microarray technologies are state of the art in biological research, which requires fast genome, proteome and transcriptome analysis technologies. Often antibodies are applied in protein microarrays as proteomic tools. Since the generation of antibod...

  • Review
  • Open Access
26 Citations
15,215 Views
20 Pages

Data Analysis Strategies for Protein Microarrays

  • Paula Díez,
  • Noelia Dasilva,
  • María González-González,
  • Sergio Matarraz,
  • Juan Casado-Vela,
  • Alberto Orfao and
  • Manuel Fuentes

Microarrays constitute a new platform which allows the discovery and characterization of proteins. According to different features, such as content, surface or detection system, there are many types of protein microarrays which can be applied for the...

  • Review
  • Open Access
14 Citations
9,179 Views
18 Pages

Integrated Amplification Microarrays for Infectious Disease Diagnostics

  • Darrell P. Chandler,
  • Lexi Bryant,
  • Sara B. Griesemer,
  • Rui Gu,
  • Christopher Knickerbocker,
  • Alexander Kukhtin,
  • Jennifer Parker,
  • Cynthia Zimmerman,
  • Kirsten St. George and
  • Christopher G. Cooney

9 November 2012

This overview describes microarray-based tests that combine solution-phase amplification chemistry and microarray hybridization within a single microfluidic chamber. The integrated biochemical approach improves microarray workflow for diagnostic appl...

  • Review
  • Open Access
4 Citations
6,104 Views
20 Pages

Genomic-Wide Analysis with Microarrays in Human Oncology

  • Kenichi Inaoka,
  • Yoshikuni Inokawa and
  • Shuji Nomoto

16 October 2015

DNA microarray technologies have advanced rapidly and had a profound impact on examining gene expression on a genomic scale in research. This review discusses the history and development of microarray and DNA chip devices, and specific microarrays a...

  • Article
  • Open Access
5,136 Views
12 Pages

20 November 2015

This report describes an experimental procedure for constructing integrated lipid, carbohydrate, and protein microarrays. In essence, it prints liposomes on nitrocellulose-coated micro-glass slides, a biochip substrate for spotting protein and carboh...

  • Review
  • Open Access
2 Citations
9,941 Views
13 Pages

Advances in lithographic approaches to fabricating bio-microarrays have been extensively explored over the last two decades. However, the need for pattern flexibility, a high density, a high resolution, affordability and on-demand fabrication is pro...

  • Feature Paper
  • Article
  • Open Access
10 Citations
7,533 Views
17 Pages

Evaluation of Solid Supports for Slide- and Well-Based Recombinant Antibody Microarrays

  • Anna S. Gerdtsson,
  • Linda Dexlin-Mellby,
  • Payam Delfani,
  • Erica Berglund,
  • Carl A. K. Borrebaeck and
  • Christer Wingren

Antibody microarrays have emerged as an important tool within proteomics, enabling multiplexed protein expression profiling in both health and disease. The design and performance of antibody microarrays and how they are processed are dependent on sev...

  • Article
  • Open Access
22 Citations
10,504 Views
16 Pages

9 February 2012

We have developed a novel microarray technology based on total internal reflection fluorescence (TIRF) in combination with DNA and protein bioassays immobilized at the TIRF surface. Unlike conventional microarrays that exhibit reduced signal-to-backg...

  • Review
  • Open Access
8 Citations
8,775 Views
14 Pages

Chromosomal Microarrays in Prenatal Diagnosis: Time for a Change of Policy?

  • Peter Miny,
  • Friedel Wenzel,
  • Sevgi Tercanli and
  • Isabel Filges

5 December 2013

Microarrays have replaced conventional karyotyping as a first-tier test for unbalanced chromosome anomalies in postnatal cytogenetics mainly due to their unprecedented resolution facilitating the detection of submicroscopic copy number changes at a r...

  • Review
  • Open Access
12 Citations
9,878 Views
23 Pages

Microfluidic-based micromosaic technology has allowed the pattering of recognition elements in restricted micrometer scale areas with high precision. This controlled patterning enabled the development of highly multiplexed arrays multiple analyte det...

  • Review
  • Open Access
57 Citations
15,519 Views
14 Pages

Uses of Dendrimers for DNA Microarrays

  • Anne-Marie Caminade,
  • Clément Padié,
  • Régis Laurent,
  • Alexandrine Maraval and
  • Jean-Pierre Majoral

24 August 2006

Biosensors such as DNA microarrays and microchips are gaining an increasingimportance in medicinal, forensic, and environmental analyses. Such devices are based onthe detection of supramolecular interactions called hybridizations that occur betweenco...

  • Article
  • Open Access
5 Citations
7,509 Views
15 Pages

Optimization of Cyanine Dye Stability and Analysis of FRET Interaction on DNA Microarrays

  • Marcel Von der Haar,
  • Christopher Heuer,
  • Martin Pähler,
  • Kathrin Von der Haar,
  • Patrick Lindner,
  • Thomas Scheper and
  • Frank Stahl

30 November 2016

The application of DNA microarrays for high throughput analysis of genetic regulation is often limited by the fluorophores used as markers. The implementation of multi-scan techniques is limited by the fluorophores’ susceptibility to photobleaching w...

  • Article
  • Open Access
5 Citations
7,707 Views
15 Pages

23 January 2015

The ability to regenerate immobilized proteins like recombinant antigens (rAgs) on surfaces is an unsolved problem for flow-based immunoassays on microarray analysis systems. The regeneration on microarray chip surfaces is achieved by changing the pr...

  • Review
  • Open Access
147 Citations
18,416 Views
17 Pages

Label and Label-Free Detection Techniques for Protein Microarrays

  • Amir Syahir,
  • Kenji Usui,
  • Kin-ya Tomizaki,
  • Kotaro Kajikawa and
  • Hisakazu Mihara

24 April 2015

Protein microarray technology has gone through numerous innovative developments in recent decades. In this review, we focus on the development of protein detection methods embedded in the technology. Early microarrays utilized useful chromophores and...

  • Review
  • Open Access
51 Citations
11,585 Views
27 Pages

27 March 2023

Microarrays are one of the trailblazing technologies of the last two decades and have displayed their importance in all the associated fields of biology. They are widely explored to screen, identify, and gain insights on the characteristics traits of...

  • Article
  • Open Access
8 Citations
12,811 Views
16 Pages

A Tool for Sheep Product Quality: Custom Microarrays from Public Databases

  • Silvia Bongiorni,
  • Giovanni Chillemi,
  • Gianluca Prosperini,
  • Susana Bueno,
  • Alessio Valentini and
  • Lorraine Pariset

4 December 2009

Milk and dairy products are an essential food and an economic resource in many countries. Milk component synthesis and secretion by the mammary gland involve expression of a large number of genes whose nutritional regulation remains poorly defined. T...

  • Article
  • Open Access
12 Citations
6,989 Views
17 Pages

Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays

  • Roman Jaksik,
  • Michal Marczyk,
  • Joanna Polanska and
  • Joanna Rzeszowska-Wolny

31 December 2013

High density oligonucleotide microarrays present a big challenge for statistical data processing methods which aim to separate changes induced by experimental factors from those caused by artifacts and measurement inaccuracies. Despite huge advances...

  • Article
  • Open Access
44 Citations
16,746 Views
12 Pages

Fluorescence Lifetime Imaging of Quantum Dot Labeled DNA Microarrays

  • Gerard Giraud,
  • Holger Schulze,
  • Till T. Bachmann,
  • Colin J. Campbell,
  • Andrew R. Mount,
  • Peter Ghazal,
  • Mizanur R. Khondoker,
  • Alan J. Ross,
  • Stuart W. J. Ember and
  • Jason Crain
  • + 4 authors

24 April 2009

Quantum dot (QD) labeling combined with fluorescence lifetime imaging microscopy is proposed as a powerful transduction technique for the detection of DNA hybridization events. Fluorescence lifetime analysis of DNA microarray spots of hybridized QD l...

  • Review
  • Open Access
20 Citations
6,744 Views
21 Pages

26 March 2021

The importance of microarrays in diagnostics and medicine has drastically increased in the last few years. Nevertheless, the efficiency of a microarray-based assay intrinsically depends on the density and functionality of the biorecognition elements...

  • Article
  • Open Access
9 Citations
9,921 Views
11 Pages

In an effort towards adapting new and defensible methods for assessing and managing the risk posed by microbial pollution, we evaluated the utility of oligonucleotide microarrays for bacterial source tracking (BST) of environmental Enterococcus sp. i...

  • Communication
  • Open Access
4 Citations
2,888 Views
12 Pages

20 January 2021

Significance analysis of microarrays (SAM) provides researchers with a non-parametric score for each gene based on repeated measurements. However, it may lose certain power in general statistical tests to correctly detect differentially expressed gen...

  • Review
  • Open Access
1 Citations
8,665 Views
13 Pages

Data obtained from expression microarrays enables deeper understanding of the molecular signatures of infectious diseases. It provides rapid and accurate information on how infections affect the clustering of gene expression profiles, pathways and ne...

  • Article
  • Open Access
12 Citations
6,544 Views
15 Pages

Development of Aptamer-Based TID Assays Using Thermophoresis and Microarrays

  • Tracy Kurth,
  • Sandra Witt,
  • Svenja Bolten,
  • Janice-Joy Waniek,
  • Carlotta Kortmann,
  • Antonina Lavrentieva,
  • Thomas Scheper and
  • Johanna-Gabriela Walter

14 October 2019

Aptamers are single-stranded oligonucleotides which can be used as alternative recognition elements for protein detection, because aptamers bind their targets with a high affinity similar to antibodies. Due to the target-induced conformational change...

  • Article
  • Open Access
6 Citations
8,546 Views
15 Pages

Automated and Multiplexed Soft Lithography for the Production of Low-Density DNA Microarrays

  • Julie Fredonnet,
  • Julie Foncy,
  • Jean-Christophe Cau,
  • Childérick Séverac,
  • Jean Marie François and
  • Emmanuelle Trévisiol

Microarrays are established research tools for genotyping, expression profiling, or molecular diagnostics in which DNA molecules are precisely addressed to the surface of a solid support. This study assesses the fabrication of low-density oligonucleo...

  • Article
  • Open Access
3 Citations
6,267 Views
15 Pages

Microarray technologies have been the basis of numerous important findings regarding gene expression in the few last decades. Studies have generated large amounts of data describing various processes, which, due to the existence of public databases,...

  • Review
  • Open Access
4 Citations
7,581 Views
22 Pages

Allergen Microarrays and New Physical Approaches to More Sensitive and Specific Detection of Allergen-Specific Antibodies

  • Pavel Sokolov,
  • Irina Evsegneeva,
  • Alexander Karaulov,
  • Alyona Sukhanova and
  • Igor Nabiev

20 July 2024

The prevalence of allergic diseases has increased tremendously in recent decades, which can be attributed to growing exposure to environmental triggers, changes in dietary habits, comorbidity, and the increased use of medications. In this context, th...

  • Article
  • Open Access
4 Citations
3,875 Views
12 Pages

Fabrication of Microarrays for the Analysis of Serological Antibody Isotypes against Food Antigens

  • Jeahee Ryu,
  • Soyoun Kim,
  • Jaeseung Song,
  • Daeun Kim,
  • Narae Keum,
  • Wonhee Jang,
  • Hyosang Bae and
  • Youngeun Kwon

10 September 2019

Food intolerance is delayed adverse food reactions which follow consumption of specific foods. The underlying mechanisms are not well understood, but food intolerance is often considered as a type 2 hypersensitivity reaction mediated by immunoglobuli...

  • Article
  • Open Access
13 Citations
3,909 Views
11 Pages

Fluorescence Signal Enhancement in Antibody Microarrays Using Lightguiding Nanowires

  • Damiano Verardo,
  • Leena Liljedahl,
  • Corinna Richter,
  • Björn Agnarsson,
  • Ulrika Axelsson,
  • Christelle N. Prinz,
  • Fredrik Höök,
  • Carl A. K. Borrebaeck and
  • Heiner Linke

16 January 2021

Fluorescence-based detection assays play an essential role in the life sciences and medicine. To offer better detection sensitivity and lower limits of detection (LOD), there is a growing need for novel platforms with an improved readout capacity. In...

  • Article
  • Open Access
6 Citations
7,729 Views
12 Pages

Focused Screening of ECM-Selective Adhesion Peptides on Cellulose-Bound Peptide Microarrays

  • Kei Kanie,
  • Yuto Kondo,
  • Junki Owaki,
  • Yurika Ikeda,
  • Yuji Narita,
  • Ryuji Kato and
  • Hiroyuki Honda

The coating of surfaces with bio-functional proteins is a promising strategy for the creation of highly biocompatible medical implants. Bio-functional proteins from the extracellular matrix (ECM) provide effective surface functions for controlling ce...

  • Article
  • Open Access
17 Citations
11,344 Views
16 Pages

31 January 2003

We present a novel method for fabricating unimole cular double-stranded DNA microarrays on solid surfaces, which were used to probe sequence-specific DNA/protein interactions. For manufacturing the unimolecular double-stranded DNA microarrays, two ki...

  • Review
  • Open Access
7 Citations
8,114 Views
22 Pages

Reliable and sensitive pathogen detection in clinical and environmental (including food and water) samples is of greatest importance for public health. Standard microbiological methods have several limitations and improved alternatives are needed. Mo...

  • Article
  • Open Access
3 Citations
6,642 Views
11 Pages

12 February 2015

The screening of living cells using high-throughput microarrays is technically challenging. Great care must be taken in the chemical presentation of potential ligands and the number of collisions that cells make with them. To overcome these issues, w...

  • Article
  • Open Access
8 Citations
4,278 Views
13 Pages

A Reliable, Label Free Quality Control Method for the Production of DNA Microarrays with Clinical Applications

  • Elisa Chiodi,
  • Francesco Damin,
  • Laura Sola,
  • Lucia Ferraro,
  • Dario Brambilla,
  • M. Selim Ünlü and
  • Marcella Chiari

21 January 2021

The manufacture of a very high-quality microarray support is essential for the adoption of this assay format in clinical routine. In fact, poorly surface-bound probes can affect the diagnostic sensitivity or, in worst cases, lead to false negative re...

  • Article
  • Open Access
13 Citations
5,930 Views
13 Pages

28 October 2013

Mood disorders are common mental diseases, but physiological diagnostic methods are still lacking. Since much evidence has implied a relationship between mood disorders and the protein composition of blood sera, it is conceivable to develop a serolog...

  • Article
  • Open Access
2 Citations
2,618 Views
16 Pages

8 November 2022

Affinity describes the non-covalent but selective interaction between an affinity binder (e.g., proteins, antibiotics, or antibodies) and its counterpart (e.g., bacteria). These affinity binders can serve to detect bacteria and respond to the need fo...

  • Article
  • Open Access
2 Citations
1,857 Views
14 Pages

Multiplex Microarrays in 96-Well Plates Photoactivated with 4-Azidotetrafluorobenzaldehyde for the Identification and Quantification of β-Lactamase Genes and Their RNA Transcripts

  • Mariya M. Ulyashova,
  • Galina V. Presnova,
  • Anna A. Filippova,
  • Vitaly G. Grigorenko,
  • Alexey M. Egorov and
  • Maya Yu. Rubtsova

Antibiotic-resistant bacteria represent a global issue that calls for novel approaches to diagnosis and treatment. Given the variety of genetic factors that determine resistance, multiplex methods hold promise in this area. We developed a novel metho...

  • Article
  • Open Access
5 Citations
3,183 Views
23 Pages

Cell-penetrating peptides (CPPs) have distinct properties to translocate across cell envelope. The key property of CPPs to translocation with attached molecules has been utilized as vehicles for the delivery of several potential drug candidates that...

  • Article
  • Open Access
27 Citations
8,631 Views
15 Pages

Developing an Efficient and General Strategy for Immobilization of Small Molecules onto Microarrays Using Isocyanate Chemistry

  • Chenggang Zhu,
  • Xiangdong Zhu,
  • James P. Landry,
  • Zhaomeng Cui,
  • Quanfu Li,
  • Yongjun Dang,
  • Lan Mi,
  • Fengyun Zheng and
  • Yiyan Fei

16 March 2016

Small-molecule microarray (SMM) is an effective platform for identifying lead compounds from large collections of small molecules in drug discovery, and efficient immobilization of molecular compounds is a pre-requisite for the success of such a plat...

  • Article
  • Open Access
1 Citations
2,730 Views
36 Pages

Identification of Secondary Breast Cancer in Vital Organs through the Integration of Machine Learning and Microarrays

  • Faisal Riaz,
  • Fazeel Abid,
  • Ikram Ud Din,
  • Byung-Seo Kim,
  • Ahmad Almogren and
  • Shajara Ul Durar

Breast cancer includes genetic and environmental factors and is the most prevalent malignancy in women contributing to the pathogenesis and progression of cancer. Breast cancer prognosis metastasizes towards bones, the liver, brain, and lungs, and is...

  • Article
  • Open Access
1,585 Views
15 Pages

16 September 2024

Proteins form the fastest-growing therapeutic class. Due to their intrinsic instability, loss of native structure is common. Structure alteration must be carefully evaluated as structural changes may jeopardize the efficiency and safety of the protei...

  • Article
  • Open Access
26 Citations
9,373 Views
12 Pages

Analysis of Acetylcholinesterase Activity in Cell Membrane Microarrays of Brain Areas as a Screening Tool to Identify Tissue Specific Inhibitors

  • Bárbara Rienda,
  • Ane Elexpe,
  • Tarson Tolentino-Cortez,
  • Marina Gulak,
  • Cristina Bruzos-Cidón,
  • María Torrecilla,
  • Egoitz Astigarraga and
  • Gabriel Barreda-Gómez

23 March 2021

Acetylcholinesterase (AChE) is responsible for hydrolyzing the acetylcholine neurotransmitter, bringing an end point to cholinergic neurotransmission. Thus, AChE is the primary target of a wide spectrum of compounds used as pesticides, nerve agents o...

  • Article
  • Open Access
8 Citations
3,882 Views
20 Pages

28 August 2019

Antimicrobial peptides (AMPs) have potential antifungal activities; however, their intracellular protein targets are poorly reported. Proteome microarray is an effective tool with high-throughput and rapid platform that systematically identifies the...

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