Search Results (106)

Game-farmed quails that are currently raised in captivity and released in hunting preserves are not attractive for many hunters because of their low antipredator instinct, which is due to the fact that in most cases, these farm-reared quails are hybrids between European common (Coturnix coturnix) and Japanese (Coturnix japonica) quails, with the latter having been selectively bred for docility. This study aimed at assessing the antipredator response of game-farmed and Japanese quails by performing three tests: human approach test, simulated aerial predator approach test and tonic immobility test. Thirty game-farmed quails (average body weight: 133 g) and thirty Japanese quails (323 g) were subjected to the tests. For each genotype of quail, fifteen males and fifteen females were used. In the human approach test, the distance at which quails moved was greater for game-farmed quails than for Japanese ones (37.4 vs. 19.6 m, p < 0.001). In the simulated aerial predator approach test, female quails of the Japanese species crouched down at the longest distance with respect to the predator (9.83 m), whereas no significant difference existed for this trait among the other three groups (6.84 m, on average). The percentage of quails flying when the predator got closer was higher for the Japanese species than for the game-farmed quails (23.3 vs. 3.33%, p = 0.023). Fewer inductions were needed to cause tonic immobility in the game-farmed quails than in the Japanese ones (3.10 vs. 4.10, p = 0.009), but then, the duration of the tonic immobility response did not differ significantly between the two genotypes. No effect of sex was detected in the human approach and tonic immobility tests. In conclusion, as compared with Japanese quails, game-farmed quails showed more fearful behaviour when confronted with a human being. Full article

Metformin is one of the most commonly used medications to treat type 2 diabetes. In addition to lowering blood sugar, it can also promote the regeneration of certain organs or tissues. Planarian Dugesia japonica, with its remarkable regenerative capacity, has become an important model organism for studying pharmacology and regenerative medicine. Planarian eyespot regeneration involves precise tissue regeneration via mechanisms like cell proliferation, differentiation, and gene regulation following body damage. Experiments on planarian eyespot regeneration have confirmed that 1 mM metformin significantly promotes regeneration. Through analysis of the regenerating planarian miRNA database and the metformin-treated transcriptome database, combined with target gene prediction by TargetScan, the DjmiR-27b/DjPax6 axis was finally determined as the research focus. qPCR showed that metformin significantly affects the expression levels of DjmiR-27b and DjPax6. DjPax6 was identified as the target gene of DjmiR-27b through dual luciferase reporter gene analysis. Functional experiments revealed that metformin regulates the expression of DjPax6 via DjmiR-27b, thereby influencing the regeneration of planarian eyespots. In situ hybridization showed that both DjmiR-27b and DjPax6 are expressed throughout the entire body. This study reveals the molecular mechanism of metformin regulating planarian regeneration through miRNA, providing further insights into its role in the field of regeneration. Full article

The combination of Chinsurah Boro II (BT)-type cytoplasmic male sterility (CMS) and Rf1, the main fertility restorer gene (Rf) for CMS-BT, has been extensively utilized for the production of three-line commercial japonica hybrid seeds. The identification of new Rf genes holds significance for the breeding of BT-type restorer lines, aiming to enhance the heterosis level of BT-type japonica hybrids. In the present study, ‘02428’, a wide-compatibility japonica variety, was observed to partially restore fertility to BT-type CMS lines. Genetic analysis revealed that ‘02428’ carries a dominant Rf gene, Rf21(t), responsible for the fertility restoration of BT-type CMS lines. Leveraging bulked segregant analysis (BSA) resequencing technology and molecular markers, the Rf21(t) locus was identified, and mapped within a candidate interval of 6–12.5 Mb on chromosome 2. Using the iso-cytoplasmic restorer populations, Rf21(t) was ultimately mapped to an interval of approximately 77 kb, encompassing 12 predicted genes, including LOC_Os02g17360, encoding a PPR-domain-containing protein and LOC_Os02g17380 (Rf2), a cloned Rf for Lead-rice-type CMS. A comparative sequence analysis, gene expression profiling and gene knockout experiments confirmed that LOC_Os02g17360 and LOC_Os02g17380 are the most likely candidates of Rf21(t). Furthermore, Rf21(t) showed the dosage effect on the fertility restoration of BT-type CMS lines. This newly identified Rf21(t) represents a valuable genetic resource for the breeding of BT-type japonica restorer lines. Our findings offer practical insights for breeders interested in advancing BT-type japonica hybrid development. Full article

This study investigated how nitrogen fertilizer management influences the yield and grain quality of two rice cultivars, Nanjing 9108 (a late-maturing medium japonica) and Ming 1 Youzhenzhan (a three-line indica hybrid). Three field experiments were conducted to assess different nitrogen application strategies, including total nitrogen reduction, panicle-stage nitrogen reduction, and substitution of chemical fertilizer with compound fertilizer. The experiments analyzed changes in rice nitrogen uptake and transport efficiency, yield and its components, and quality and its components under different nitrogen application treatments, and fitted a function based on the effect of total nitrogen fertilizer on quality. Taking into account four quality indicators and ensuring yield reduction is less than 30%, replacing 100% chemical fertilizer with compound fertilizer in Nanjing 9108 was the optimal strategy for significantly improving quality. Reducing panicle fertilizer by 50% or omitting it also significantly improved quality. Replacing chemical fertilizers with 50% compound fertilizer also maintained nutritional quality. Reducing total nitrogen fertilizer by 25% in Ming 1 Youzhenzhan was the optimal strategy for significantly enhancing quality. Replacing chemical fertilizer with 100% compound fertilizer significantly improved quality. Reducing panicle fertilizer by 50% and substituting 50% of chemical fertilizer with compound fertilizer also significantly improved quality. Taking into account the synergistic effects of nitrogen application measures on rice yield and quality, the performance of the two rice varieties is not identical. The results showed that nitrogen fertilizer management significantly affected both yield and quality, with responses varying between the two varieties. But the two varieties can ensure optimal quality under yield conditions by reducing panicle fertilizer application by 50% and replacing chemical fertilizers with compound fertilizers. Full article

In a hypothetical climate change scenario, zoysiagrass species could be a good choice for turfgrass areas due to their adaptation to heat conditions and the great variability in species and cultivars. Knowledge of the root system’s characteristics is paramount for predicting cultivar adaptation to different heat–drought scenarios and therefore for designing proper turfgrass management programs, especially irrigation. A field experiment was conducted in the Mediterranean environment of Valencia (Spain) to study the root weight density (RWD), root length density (RLD), and average root diameter (RDI) at three different soil depths (0–5, 5–15, and 15–30 cm) of five new zoysiagrass genotypes (Zoysia matrella (L.) Merr., Zoysia japonica Steud., and their hybrid), relating these parameters to the performance of these experimental lines during their establishment. All the tested experimental lines had a higher RWD and RLD in the upper soil layer (0–5 cm), while the RDI was higher in the lowest layer of the sampled soil profile (0.269 mm compared with 0.249 mm and 0.241 mm in the upper layers). All the tested genotypes showed the same RWD and RLD, while the Zoysia matrella experimental line A showed a higher RDI value (0.2683 mm) than those for the Z. japonica (0.2369 mm) and the hybrid (0.2394 mm) genotypes. This last finding could have influenced its more rapid establishment, although it was not linked to its NDVI values during autumn. In conclusion, different morphological root characteristics were detected among new zoysiagrass genotypes and soil depths, which could have affected their canopy performance, and they are expected to affect irrigation management in a possible future drought scenario. Full article

Background/Objectives: To overcome the limitations imposed by bacterial blight on widely adopted indica–japonica hybrid rice, this study employed molecular design breeding strategies to develop a resistant germplasm. Methods: Through conventional backcross breeding combined with molecular-marker-assisted selection, the Xa23-carrying material XR39 was hybridized with the wide-compatibility restorer line R5315 harboring the S5n gene. Progeny selection integrated evaluations of agronomic traits, disease resistance identification, and test-crossing with sterile lines. Results: Five wide-compatibility restorer lines simultaneously incorporating the Xa23 and S5n genes were successfully developed, demonstrating outstanding bacterial blight resistance and restoration ability. The selected hybrid combinations, A3/RP1, A1/RP4, and A4/RP4, exhibited yield increases of 2.6–8.6% compared to the control. Conclusions: This study not only established a novel germplasm for developing bacterial blight-resistant indica–japonica hybrid rice varieties, but also established a model for gene design breeding for rice improvement. Full article

Against the background of increasing global soil salinity, exogenous salicylic acid (SA) and melatonin (MT) have attracted much attention for their potential in regulating plant stress tolerance and have become an important research direction for the development of green and sustainable agriculture. In this study, the alleviating effects of different concentrations of SA (100–900 μM) and MT (100–900 μM) on salt stress (50 mM NaCl) and their physiological mechanisms were systematically investigated using the Tianjin specialty rice, Xiaozhan rice, as the research object. The results showed that salt stress significantly inhibited the germination and seedling growth of the two varieties, in which the salt-sensitive variety Jinchuan No. 1 showed significantly higher decreases in root length, plant height, and biomass (54.7–69.1%) than the salt-tolerant variety Jindao 919 (4.0–28.9%). Exogenous SA and MT were effective in mitigating salt stress injury, but there were genotypic differences in their pathways of action. For the first time in japonica rice, the genotype specificity of the SA/MT response was clearly revealed: SA dominated the response of salt-tolerant varieties by enhancing antioxidant defences, whereas MT optimized the overall performance of the salt-sensitive varieties through scavenging of reactive oxygen species, and in addition, it was further determined that SA and MT exhibited optimal mitigating effects on both varieties in the 300–700 μM concentration range, showing the best mitigation effect for both varieties. This finding provides an important theoretical basis and technological paradigm for precision stress tolerance cultivation of saline rice, and the application of appropriate concentrations of SA/MT according to genotype specificity to reduce the dependence on agrochemicals is of practical value in promoting green and sustainable production in saline agriculture. Full article

Camellia’s ornamental value is constrained by its natural winter–spring flowering period. Although the discovery of Camellia azalea provides important germplasm resources for developing cultivars with year-round flowering, the molecular mechanisms underlying flowering time variation remain unclear. Here, we investigated three germplasms with distinct flowering patterns: winter–spring flowering Camellia japonica ‘Tieke Baozhu’, summer–autumn flowering Camellia azalea, and their hybrid Camellia ‘Lingnan Yuanbao’ inheriting the latter’s flowering traits. Integrated transcriptomic and metabolomic analyses revealed that differentially expressed genes (DEGs) and metabolites (DAMs) were mainly enriched in the pathways related to photoperiod regulation, plant hormone synthesis and signal transduction and flavonoid synthesis. The transcription factor (TF) analysis revealed that the bHLH and MYB TF families were significantly differentially expressed in different Camellia germplasm, suggesting their potential involvement in the regulation of flowering time through the plant hormone signal transduction and photoperiod pathway. Meanwhile, photoperiod regulation related genes, including Cryptochrome circadian regulator (CRY), Timing of CAB expression 1 (TOC1), and phytochrome interacting factor 3 (PIF3), showed significant expression differences, further confirming the photoperiod pathway’s crucial regulatory function. In terms of plant hormone levels, there were significant differences in the levels of gibberellin (GA), abscisic acid (ABA), and jasmonic acid (JA) among Camellia germplasm. The differential expression characteristics of DELLA (Asp-Glu-Leu-Leu-Ala) proteins indicated that the GA signal transduction pathway was one of the key factors regulating flowering time in Camellia. Additionally, metabolomics analyses showed significant differences in flavonoid metabolite content among Camellia germplasm, which was significantly correlated with the different developmental stages of the buds. Our findings provide a theoretical basis for the molecular breeding of everblooming Camellia cultivars, advancing the understanding of flowering regulation mechanism in ornamental species. Full article

The high yield potential and stability of hybrid japonica rice varieties are crucial for sustainable agricultural development and food security. Rice varieties must undergo rigorous testing through multi-site regional trials before being introduced to the market in China. The assessment of these regional trials is essential for guiding rice breeding. In this study, we evaluated the yield performance of 13 hybrid japonica rice genotypes (g1–g13) across six regional trial sites (e1–e6) in Jiangsu province, China. Variance analysis revealed that genotype (G), environment (E), and genotype-by-environment (G × E) interactions significantly influenced the yield of hybrid japonica rice varieties. The effects of G × E interactions on the yield potential and stability of these tested rice varieties were further analyzed using Genotype plus Genotype-by-Environment interaction (GGE) biplot and additive main effects and multiplicative interaction (AMMI) model analyses. The results reveal that Zhegengyou2035 (g4) and Changyou20-2 (g3) exhibited superior yield potential and stability, while Huazhongyou9413 (g12) exhibited broad adaptability. Additionally, the assessment of discrimination and representativeness among regional trial sites revealed that the Wujin Rice Research Institute (e6) served as an optimal testing location. Our findings identify the most suitable rice varieties for the area and assess their potential as initial material in the selection processes for breeding new varieties. Additionally, this work contributes to the strategic selection of optimal testing locations. Full article

‘Dianheyou615’ (DHY615) is an elite Dian (D1)-type hybrid japonica rice variety, renowned for its high yield, exceptional grain quality, and unique adaptability to both irrigated and rainfed conditions in the Yungui Plateau of southwestern China. However, the genetic mechanisms underlying the agronomic performance of the D1-type hybrid japonica rice remain unclear. In this study, a comprehensive analysis of ‘DHY615’’s agronomic performance, genetic genealogy, and molecular genetic foundation was conducted to dissect its desirable traits for upland rainfed cultivation across diverse ecological environments. The main findings indicate that ‘DHY615’ possesses 6432 heterozygous SNPs, with 57.48% and 14.43% located in the promoter and coding regions, respectively, potentially affecting key phenotypic traits. High-impact SNPs variants and numerous well-known functional genes were identified, such as OsAAP6, GS3, Sd1, Rf1, BADH2, BPh14, Rymv1, OsFRO1, NRT1.1B, SKC1, OsNCED2, and qUVR-10, which are likely linked to traits including plant architecture, grain yield, grain quality, and resistance to various biotic and abiotic stresses (e.g., disease, cold, drought, salt, high iron, and high UV radiation). Notably, ‘Nan615’ harbors a greater number of functional allele variants compared to ‘H479A’, which potentially explaining its superior grain yield and remarkable adaptability. This study offers novel and valuable insights into the molecular genetic foundation of the plateau D1-type hybrid japonica rice, underscoring its potential for sustainable rice production across diverse ecological zones, especially with its unparalleled high-altitude adaptability to rainfed upland planting. Full article

With the continuous improvement in living standards, consumers’ demand for rice quality has been increasingly growing. This study analyzed the quality characteristics of different rice varieties under various cultivation methods. This study examined the rice variety Liaoxing 21 (LX21), the upland rice variety Han 9710 (H9710), and the hybrid rice variety Liaoyou 7362 (LY7362) from Liaoning Province to evaluate the effects of transplanting (TP) and direct seeding (DS) on processing, appearance, nutritional, and tasting quality. The results indicated that the planting method (PM) had a relatively minor impact on processing quality. Compared to TP, DS significantly increased grain length (GL) by 1.19%, grain width (GW) by 2.69%, appearance (A) by 2.61%, stickiness (Ss) by 7.15%, degree of balance (DB) by 3.19%, apparent amylose content (AAC%) by 6.20%, fa by 0.66%, fa/fb₃ by 5.34%, and protein content (PC) by 19.93%. However, DS significantly reduced the grain length/width ratio (GL/W) by 1.03%, chalky grain rate (CGR) by 46.00%, chalkiness (CH) by 52.76%, and fb₃ by 4.23%. Compared to DS, TP resulted in a higher peak viscosity (PV), final viscosity (FV), and pasting temperature (PaT), whereas setback (SB) was lower. Among the tested varieties, LX21 exhibited superior milled rice rate (MRR), head rice rate (HRR), GL, GL/W, A, Ss, DB, taste value (T), and FV compared to H9710 and LY7362, while demonstrating significantly lower CGR, CH, hardness (H), fa, trough viscosity (TV), and peak time (PeT). Under the same planting conditions, the conventional rice variety LX21 demonstrated excellent processing, appearance, and taste quality, whereas H9710 exhibited favorable nutritional quality and Rapid Visco Analyzer (RVA) characteristics. Meanwhile, we also analyzed the correlation between temperature/light conditions and nutritional quality, as well as RVA profiles. The results showed that variations in temperature and light were closely associated with amylopectin accumulation and starch pasting properties. This study highlights the findings that selecting the appropriate PMs and japonica rice varieties can effectively enhance overall rice quality. In the medium maturing regions of Liaoning Province, adopting DS with medium–early maturing japonica rice varieties offers an optimal production strategy for achieving high quality, high yield, and efficient utilization of temperature and light resources. Full article

The research on rice lodging resistance holds immeasurable value for achieving high yield, stable production, and superior quality of rice. To investigate the effects of mechanical properties and physicochemical characteristics of Japonica hybrid rice on its lodging resistance ability under natural field cultivation conditions, LY1052, LY9906, and GY1, which were mainly popularized in northern China, were selected as the experimental subjects, and NL313, Japonica hybrid rice prone to lodging, was taken as the control (NL313).The max bending force, breaking moment, bending section coefficient, single stem weight mass moment, bending strength, Young’s elastic modulus, inertia moment, and other mechanical indexes were measured by the bending test and tensile test, and the correlations between mechanical indexes, physicochemical indexes, and lodging index were studied. There was an extremely significant difference in the lodging index of experimental subjects and control (NL313) (p < 0.05). Therefore, it was concluded that the lower plant height and lighter panicle were not the stronger lodging resistance under appropriate cultivation conditions. Optimization of rice plant-type structure can achieve the unity of high culm and high yield. The lodging resistance of rice could be improved by shortening the internode length, increasing the tissue thickness and vascular bundle area, and increasing the content of cellulose and potassium in the stem. It was also found that the lodging resistance of rice plants was positively correlated with the maximum stem bending force, breaking moment, bending section coefficient, bending strength, and Young’s elastic modulus (p < 0.01) and negatively correlated with single stem weight mass moment and inertia moment (p < 0.01). It is feasible to select them as reference indexes of the lodging resistance of rice. The experimental results not only help to enrich the theoretical system of rice lodging resistance research but also provide an essential reference and basis for formulating scientific cultivation and management measures and breeding lodging-resistant rice varieties in practical production, which is of great significance for ensuring global food security and promoting sustainable agricultural development. Full article

In recent years, there has been widespread cultivation of high-quality rice along the southeast coast of China, particularly in Shanghai. However, the specific changes in the yield and quality performance of rice in the Shanghai region have not been well understood. A study conducted on 194 rice varieties in the Shanghai region from 1994 to 2023 focused on yield, growth characteristics, and quality. The findings revealed significant increases in rice yield (+16.8%) and spikelets per panicle (+45.4%) in the Shanghai region over the past 30 years, along with a decrease in amylose content (−27.9%). However, parameters such as grain filling, 1000-grain weight, plant height, panicle length, chalkiness, and gel consistency showed no significant changes over the same period. Additionally, the study found that the yield, nitrogen application amount, growth period, and head rice rate of japonica rice and indica-japonica hybrid rice were higher than those of indica rice, although the panicle length was lower in comparison. Japonica inbred rice exhibited the lowest amylose content and superior taste. Correlation analyses suggested that the breeding of japonica rice varieties in the Shanghai region should focus on balancing nitrogen absorption and high chalkiness, plant biomass, and amylose content, and yield and the appearance and taste quality of rice. In addition, the potential rice yield per unit area in the Shanghai region in the future depends on the promotion of hybrid japonica rice planting and developing best management practices. Full article

Background: Rice bacterial leaf blight, caused by the Gram-negative bacterium Xanthomonas oryzae pv. Oryzae (Xoo), significantly impacts rice production. To address this disease, research efforts have focused on discovering and utilizing novel disease-resistant genes and examining their functional mechanisms. Methods and Results: In this study, a variety of bacterial strains were utilized. CX28-3, AX-11, JC12-2, and X10 were isolated from the high-altitude japonica rice-growing region on the Yunnan Plateau. Additionally, PXO61, PXO86, PXO99, and PXO339, sourced from the International Rice Research Institute (IRRI), were included in the analysis. To evaluate the resistance characteristics of Haonuoyang, artificial leaf cutting and inoculation methods were applied. Results indicated that Haonuoyang exhibited broad-spectrum resistance. Additionally, to explore the genetic mechanisms of resistance, the TFAIII-type transcription factor OsZFPH was cloned from Haonuoyang using PCR amplification. The subcellular localization method identified the precise location of the OsZFPH gene within the cell. The expression of OsZFPH was induced by Xoo stress. The overexpression of OsZFPH resulted in increased activities of enzymes, including SOD, CAT, and POD, while silencing the gene led to reduced enzyme activities. Furthermore, the hormones SA (salicylic acid), JA (jasmonic acid), and GA (gibberellin) were shown to positively regulate the gene expression. Protein interactions with OsZFPH were verified through a yeast two-hybrid system and BiFC technology. Hap5, which aligned with the sequence of Haonuoyang, was found to belong to a haplotype consisting of Jingang 30, 40 resequenced rice varieties, 18 Oryza rufipogon, and 29 Oryza granulata. Conclusions: The findings of this study emphasize the vital role of OsZFPH in rice resistance to bacterial leaf blight. The identification of broad-spectrum resistance in Haonuoyang and the understanding of OsZFPH gene functions provide valuable insights for the future development of rice varieties with improved resistance to this destructive disease. Full article

Awn length is a significant agronomic trait in rice. To analyze the genetic mechanism of awn length in the chromosome segment substitution line 29 (CSSL29) derived from 9311 (recipient) into Nipponbare (NIP, donor), an F₂ segregated population was constructed from 9311 (indica) and CSSL29. The population and candidate genes were analyzed using quantitative trait loci sequencing (QTL-seq), yeast two-hybrid assays, and 3 k and 10 k rice population databases. The results indicated that the awn length in the F₂ segregating population followed a normal distribution, and the long-awn phenotype in CSSL29 was controlled by multiple genes. Through BSA sequencing data, a major QTL qAWN4 associated with rice awn length was identified on chromosome 4, containing the cloned gene An-2. Further investigation of the CSSL29 long-awn substitution segment revealed the presence of the awn length gene An-1, with both genes exhibiting an additive effect on the regulation of the long-awn phenotype. Yeast two-hybrid experiments confirmed no interaction between An-2 and An-1, suggesting that additive effect awn length regulation is not mediated through simple protein-to-protein binding. Population genetic analysis indicated that the An-2 allele was artificially selected during domestication but did not significantly differ between indica and japonica subspecies. These findings enhance our understanding of the genetic regulation of rice awn length and the domestication of long-awn rice, laying the groundwork for future research in this area. Full article