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25 pages, 871 KB  
Article
Integrating Land Use and Poaching Impacts for Sustainable Wildlife Management in the Atlantic Forest of Misiones, Argentina
by Delfina Sotorres, Carina F. Argüelles, Orlando M. Escalante, Miguel A. Rinas and Karen E. DeMatteo
Sustainability 2026, 18(9), 4329; https://doi.org/10.3390/su18094329 (registering DOI) - 27 Apr 2026
Abstract
Misiones, Argentina, holds one of the largest remnants of the Atlantic Forest, with almost 1.4 million hectares of native forest, representing a critical landscape for sustainable biodiversity conservation. However, connectivity across this ecoregion is increasingly threatened by habitat conversion, landscape fragmentation, and poaching [...] Read more.
Misiones, Argentina, holds one of the largest remnants of the Atlantic Forest, with almost 1.4 million hectares of native forest, representing a critical landscape for sustainable biodiversity conservation. However, connectivity across this ecoregion is increasingly threatened by habitat conversion, landscape fragmentation, and poaching pressures that extend beyond protected area boundaries, undermining long-term sustainability of wildlife populations. Using conservation detection dogs, we located, collected, and genetically confirmed 198 scats belonging to four game species: 20 lowland tapir (Tapirus terrestris), 72 white-lipped peccary (Tayassu pecari), 55 collared peccary (Pecari tajacu), and 51 Azara’s agouti (Dasyprocta azarae). Analyses examining species-specific habitat associations emphasized the importance of extending inference beyond point locations to encompass species’ home ranges, with native forest consistently identified as a key component of habitat use. The high prevalence of scats in mosaics of human-modified habitats outside protected areas, especially along their borders, underscores the importance of managing these areas as part of a broader sustainable landscape matrix. While native forest fragments outside of protected areas may serve as important refugia supporting species persistence, their contribution to sustainable management depends on reducing poaching pressure across these landscapes. There is an urgent need to expand antipoaching efforts beyond protected areas and across the Atlantic Forest in the Green Corridor of Misiones while preventing ongoing deforestation and the expansion of monoculture plantations. Achieving sustainable wildlife management in this region will require integrated strategies that promote sustainable land use, conservation planning, and rural development. Full article
20 pages, 6620 KB  
Article
Soil-Driven Adaptive Strategies: Functional Trait Variation in Dominant Plants of a Karst Plateau Lake Shoreline Wetlands
by Yang Wang, Jintong Ren, Wanchang Zhang, Hong Zhao, Li Li, Ying Deng and Xiaohui Xue
Diversity 2026, 18(5), 260; https://doi.org/10.3390/d18050260 (registering DOI) - 27 Apr 2026
Abstract
Wetland ecosystems have been a central focus of ecological research for an quite some time. Nevertheless, the degradation of wetland riparian zones has markedly accelerated due to anthropogenic activities, climate change, and habitat heterogeneity. The objective of this paper is to investigate the [...] Read more.
Wetland ecosystems have been a central focus of ecological research for an quite some time. Nevertheless, the degradation of wetland riparian zones has markedly accelerated due to anthropogenic activities, climate change, and habitat heterogeneity. The objective of this paper is to investigate the differences in functional traits of riparian plants under changing wetland environments on a karst plateau, as well as to elucidate the adaptive strategies of wetland plants across different habitats. This study examines the Caohai Wetland located on the Guizhou karst plateau, selecting the leaves of four dominant plant species (Phragmites australis, Onopordum acanthium, Galium odoratum, Paspalum distichum) in the Caohai Wetland lakeshore zone and analyzes the influence of soil factors on the variation of plant functional traits within the wetland riparian zone. The results reveal that: (1) significant differences exist in the functional traits of dominant plants in the riparian zones of karst plateau wetlands, with complex interrelationships among these traits; (2) the coefficients of variation for magnesium (Mg) and calcium (Ca) in the soil are notably high (79.53% and 67.21%, respectively), whereas soil oxidation-reduction potential (ORP) exhibits the lowest coefficient of variation (4.36%)—furthermore, the convergent variation in specific leaf area (SLA) and leaf dry matter content (LDMC) directly reflects the strong environmental filtering imposed by this habitat—and (3) redundancy analysis (RDA) indicates that leaf length (LL), specific leaf area (SLA), leaf area (LA), and plant carbon content (PCC) are particularly sensitive to environmental changes, while soil calcium (Ca), total nitrogen (TN), water-dispersible clay (WDR), soil organic matter (SOM), soil moisture content (SPMC), and total potassium (TK) constitute the principal soil factors influencing plant adaptive strategies in karst plateau wetlands. In conclusion, this study demonstrates that adaptation to karst wetland habitats is mediated through trade-offs in the allocation of photosynthetic products and the regulation of carbon (C), nitrogen (N), and phosphorus (P) nutrient balances under calcium-enriched and phosphorus-limited conditions, thereby reflecting the response characteristics of functional traits in karst plateau wetland plants to environmental changes. Full article
21 pages, 2542 KB  
Article
Integrated Metabolomics and Transcriptomics Reveal the Influence of Natural and Cultivation-Managed Habitats on Metabolic Divergence and Flavonoid Enrichment in Anoectochilus roxburghii
by Erli Wang, Weicheng Gao, Peng Wang and Xiaoping Wang
Metabolites 2026, 16(5), 294; https://doi.org/10.3390/metabo16050294 (registering DOI) - 27 Apr 2026
Abstract
Background/Objectives: Environmental conditions in natural and cultivation-managed habitats strongly influence plant physiology and medicinal quality. However, the molecular mechanisms underlying metabolic differentiation in Anoectochilus roxburghii remain poorly understood. This study aimed to elucidate the metabolic and transcriptional differences between wild and cultivated [...] Read more.
Background/Objectives: Environmental conditions in natural and cultivation-managed habitats strongly influence plant physiology and medicinal quality. However, the molecular mechanisms underlying metabolic differentiation in Anoectochilus roxburghii remain poorly understood. This study aimed to elucidate the metabolic and transcriptional differences between wild and cultivated A. roxburghii and to identify the regulatory mechanisms driving habitat-associated variation in metabolite profiles. Methods: We applied integrated non-targeted metabolomics and transcriptomics to compare metabolic profiles and gene expression in the leaves and stems of 15-month-old wild and cultivated A. roxburghii plants. Gene–metabolite correlation analysis was performed to identify coordinated correlation networks associated with key biosynthetic pathways. Results: Our analyses revealed clear differences in metabolite composition and transcriptional patterns between habitat types, suggesting distinct strategies of metabolic resource allocation. Wild plants showed significant enrichment of amino acids and other primary metabolites, whereas cultivated plants accumulated higher levels of flavonoids. Gene–metabolite correlation analysis indicated that multiple flavonoid metabolites were closely associated with key structural genes, including F3H, C12RT1, and HHT1, forming a tightly connected correlation network. In addition, several transcription factor families, including MYB, bHLH, WRKY, and AP2/ERF, showed strong correlations with genes involved in the flavonoid pathway, suggesting that flavonoid accumulation in cultivated plants may be associated with coordinated transcriptional control. Conclusions: Taken together, these findings suggest that habitat conditions are associated with differences in metabolic networks and resource allocation in A. roxburghii. This work provides new insight into the metabolic plasticity of this medicinal plant and highlights potential factors associated with molecular mechanisms that may contribute to variation in medicinal quality. Full article
(This article belongs to the Section Pharmacology and Drug Metabolism)
38 pages, 1186 KB  
Review
Sensor-Based Precision Feeding Systems in Animal Production: Technologies and Applications
by Francesco Giannico, Claudia Carbonara, Anna Caputi Jambrenghi, Marco Ragni, Abdelfattah Zeidan Mohamed Salem, Simona Tarricone, Maria Selvaggi and Maria Antonietta Colonna
Animals 2026, 16(9), 1333; https://doi.org/10.3390/ani16091333 - 27 Apr 2026
Abstract
Despite the productivity and economic limitations imposed by environmental and climatic conditions, livestock systems play a fundamental role in preserving habitats and high-conservation-value species, while delivering a broad spectrum of ecosystem services to rural populations. Breeders need timely information to produce safe, inexpensive, [...] Read more.
Despite the productivity and economic limitations imposed by environmental and climatic conditions, livestock systems play a fundamental role in preserving habitats and high-conservation-value species, while delivering a broad spectrum of ecosystem services to rural populations. Breeders need timely information to produce safe, inexpensive, environmentally, and welfare-friendly food products. Information on feeding and nutrition is of particular importance since it represents a significant percentage of animal breeding costs. Automating the collection, analysis, and use of production-related information on livestock feeding systems represents one of the central challenges facing the sector. Precision feeding systems (PFSs) have deeply changed farm management by providing new information on the health status of animals, their welfare, and nutritional requirements. PFSs encompass modern electronic and ICT-related (information and communication technologies) technologies that facilitate the electronic measurement of critical components, ensuring optimum efficiency of both resource use and animal productivity. This review analyzes the current state and potential applications of precision feeding systems for sustainable livestock production. The implementation and feasibility of PFSs have been investigated across the major animal production species and contexts. Based on the available literature, real-time monitoring and control systems can improve the production efficiency of livestock farms. However, further research is needed, as several components of PFSs are still at different stages of development and commercial readiness. Full article
(This article belongs to the Section Animal Nutrition)
22 pages, 2160 KB  
Article
Distance-Dependent Patterns of Metcalfa pruinosa (Say, 1830) Across a Forest–Crop Interface in an Agricultural Landscape
by Denisa-Daliana Sfirculus and Ioana Grozea
Agronomy 2026, 16(9), 878; https://doi.org/10.3390/agronomy16090878 (registering DOI) - 27 Apr 2026
Abstract
Invasive polyphagous insects are an increasing concern in agricultural landscapes, particularly where forest and crop habitats occur in close proximity. The invasive planthopper Metcalfa pruinosa (Say, 1830) has expanded widely across Europe, yet its distribution across forest–crop interfaces remain insufficiently documented. This study [...] Read more.
Invasive polyphagous insects are an increasing concern in agricultural landscapes, particularly where forest and crop habitats occur in close proximity. The invasive planthopper Metcalfa pruinosa (Say, 1830) has expanded widely across Europe, yet its distribution across forest–crop interfaces remain insufficiently documented. This study examined the population dynamics of M. pruinosa along a forest–crop gradient in western Romania during the 2024–2025 growing seasons. Monitoring was conducted in a deciduous forest habitat and in adjacent crop systems located at increasing distances from the forest edge. In the forest habitat, adult abundance was consistently higher near the forest margin, while nymphs were recorded in the forest interior, indicating local development. In adjacent crop systems, both adult and nymph abundance showed a clear distance-dependent decline, with higher values recorded closer to the forest edge. Crop-level incidence and seasonal severity generally followed the same spatial pattern, with higher infestation levels in sites located nearer to the forest margin. These findings show a consistent spatial association between forest proximity and variation in M. pruinosa abundance and infestation levels across the forest–crop interface. Full article
(This article belongs to the Section Pest and Disease Management)
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24 pages, 3020 KB  
Review
A Narrative Review of Microplastics in Terrestrial Ecosystems: Impacts on Wild Herbivores and Emerging Conservation Priorities, Supported by Evidence from Livestock and Experimental Mammals
by Subrata Saha, Rachita Saha, Manjil Gupta, Debangana Saha, Ananya Paul, Surovi Roy, Alolika Bose, Sulagna Chandra, Koustav Kundu, Elena I. Korotkova, Muhammad Saqib and Pradip Kumar Kar
Microplastics 2026, 5(2), 79; https://doi.org/10.3390/microplastics5020079 (registering DOI) - 27 Apr 2026
Abstract
Microplastic (MP) and nanoplastic (NP) pollution has emerged as a pervasive and still insufficiently quantified pressure on terrestrial ecosystems, yet its consequences for wild herbivores remain incompletely understood. As key links between primary producers and higher trophic levels, wild herbivores occupy a critical [...] Read more.
Microplastic (MP) and nanoplastic (NP) pollution has emerged as a pervasive and still insufficiently quantified pressure on terrestrial ecosystems, yet its consequences for wild herbivores remain incompletely understood. As key links between primary producers and higher trophic levels, wild herbivores occupy a critical ecological position and may serve both as exposed receptors and as biological vectors of plastic contamination. This manuscript presents a narrative review that synthesizes recent advances in understanding the physiological, behavioural, and ecological implications of MP and/or NP exposure in free-ranging herbivorous mammals, integrating evidence from field surveys, experimental studies, ecological modelling, and supportive mechanistic findings from livestock and experimental mammalian systems. Available evidence indicates that MPs and NPs are consistently detected in wild herbivores from both human-modified and protected landscapes, demonstrating widespread terrestrial exposure. Reported biological effects include oxidative stress, digestive dysfunction, inflammatory and immune responses, altered gut microbial communities, impaired nutrient assimilation, and organ-level damage, although much of the mechanistic evidence derives from controlled laboratory or livestock-based studies rather than direct wildlife investigations. Behavioural responses remain comparatively underexplored, particularly in large-bodied herbivores, with limited evidence for altered foraging, habitat use, and stress-related behaviours. At the ecosystem level, emerging studies suggest that herbivores may contribute to the landscape-scale redistribution of MPs and NPs through movement and faecal deposition, with potential downstream effects on soil processes, nutrient cycling, and plant–herbivore interactions. However, the current evidence base is constrained by major methodological and conceptual limitations, including the lack of standardized detection and reporting protocols, limited ecological realism in exposure studies, taxonomic and geographic biases, and poor resolution of long-term population-level and food-web consequences. Overall, the available literature indicates that MP and NP pollution represent a multifaceted and emerging risk to wild herbivores and the ecosystems they inhabit. Future research should prioritize standardized contamination-controlled monitoring, non-invasive faecal surveillance, ecologically realistic chronic exposure studies, and integrated conservation frameworks that recognize wild herbivores as sentinel species for terrestrial plastic pollution. Full article
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16 pages, 2240 KB  
Article
A Study on the Environmental Adaptation Mechanism of Plants in Hanzhong Tiankeng
by Shuang Li and Jiankuo Du
Appl. Sci. 2026, 16(9), 4242; https://doi.org/10.3390/app16094242 (registering DOI) - 26 Apr 2026
Abstract
Tiankeng ecosystems are characterized by strong microenvironmental gradients that influence plant adaptation; however, the molecular mechanisms underlying plant responses to altitudinal variation remain poorly understood. In this study, transcriptome sequencing and bioinformatic analyses were conducted to investigate the environmental adaptation mechanisms of three [...] Read more.
Tiankeng ecosystems are characterized by strong microenvironmental gradients that influence plant adaptation; however, the molecular mechanisms underlying plant responses to altitudinal variation remain poorly understood. In this study, transcriptome sequencing and bioinformatic analyses were conducted to investigate the environmental adaptation mechanisms of three representative plant species (Hydrangea strigosa Rehder, Pilea martini, and Pilea sinofasciata) distributed along the vertical gradient of the Hanzhong Tiankeng in Shaanxi Province, China. Differential gene expression and functional enrichment analyses were performed to explore transcriptional responses under different altitude conditions. The results showed that flower coloration in Hydrangea strigosa Rehder was associated with the activation of sugar metabolism and triterpenoid biosynthesis pathways, suggesting potential indirect roles in modulating cellular metabolism and physiological conditions linked to flower coloration, while poor growth at the tiankeng bottom was associated with enhanced cellular respiration under low-light conditions, suggesting a potential link between energy metabolism and growth performance. In contrast, Pilea martini and Pilea sinofasciata exhibited better growth in the pit-bottom environment. Pilea martini promoted growth through enhanced carbohydrate metabolism and tricarboxylic acid cycle activity, whereas Pilea sinofasciata responded to environmental stress through hormone signaling, triterpenoid biosynthesis, and light signaling pathways. These findings reveal species-specific molecular strategies for plant adaptation to altitude-related environmental gradients in tiankeng ecosystems and provide insights into plant survival mechanisms in karst habitats. Full article
(This article belongs to the Section Agricultural Science and Technology)
17 pages, 2679 KB  
Article
Genetic Variation and Spatial Genetic Structure of Eleocharis ussuriensis Zinserl. in South Korea: Implications for Ecological Monitoring and Resource Management
by Eun-Hye Kim, Kang-Rae Kim, Mi-Hwa Lee, Jaeduk Goh and Jeong-Nam Yu
Genes 2026, 17(5), 513; https://doi.org/10.3390/genes17050513 (registering DOI) - 26 Apr 2026
Abstract
Background/Objectives: Eleocharis ussuriensis Zinserl. is a perennial riparian sedge widely distributed in Northeast Asia and a dominant component of freshwater vegetation in South Korea. However, the intraspecific genetic structure of this species across contrasting hydrological habitats remains insufficiently understood. This study aimed [...] Read more.
Background/Objectives: Eleocharis ussuriensis Zinserl. is a perennial riparian sedge widely distributed in Northeast Asia and a dominant component of freshwater vegetation in South Korea. However, the intraspecific genetic structure of this species across contrasting hydrological habitats remains insufficiently understood. This study aimed to develop novel SSR markers from whole-genome data and investigate genetic variation and population structure among E. ussuriensis populations in South Korea. Methods: Twenty-one novel simple sequence repeat (SSR) markers were developed from whole-genome sequence data and applied to analyze genetic variation in 120 individuals from 6 populations. Genetic diversity, differentiation, and gene flow were estimated using allele-frequency-based metrics, and population genetic structure was further evaluated using spatial information derived from geographic coordinates. Results: A total of 201 alleles were detected, with a mean polymorphism information content (PIC) of 0.759, indicating high marker informativeness. Mean genetic diversity across populations showed observed heterozygosity (Ho = 0.360) and expected heterozygosity (He = 0.281), while multilocus genotype ratios (G/N) ranged from 0.30 to 1.00 among populations. Genetic differentiation was substantial (FST = 0.373–0.669; Jost’s D = 0.540–0.997). Mantel tests revealed that genetic differentiation was significantly correlated with geographic distance (r = 0.67, p < 0.001). Both allele-frequency-based and spatially explicit approaches suggested genetic structuring among populations. Conclusions: The results suggest spatial tendencies in genetic structure among populations, reflecting patterns of allele distribution across regions. These findings provide baseline information on genetic variation in E. ussuriensis and may contribute to a better understanding of its ecological dynamics. Full article
(This article belongs to the Special Issue Genetic and Morphological Diversity in Plants)
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14 pages, 1201 KB  
Article
Testing Climatic Stability–Endemism Relationships Using Western Balkan Endemic Beetles’ Localities and Paleoclimate Reconstructions
by Desislava Stoianova and Ivan Tomov
Ecologies 2026, 7(2), 38; https://doi.org/10.3390/ecologies7020038 (registering DOI) - 26 Apr 2026
Abstract
An association between long-term climatic stability and endemism has been suggested, but it has been tested in plants and vertebrates rather than invertebrates. Using high-resolution paleoclimate reconstructions (CHELSA-TraCE21k; 21,000 BP–present), we tested whether non-cave localities of endemic beetles in the western Balkans are [...] Read more.
An association between long-term climatic stability and endemism has been suggested, but it has been tested in plants and vertebrates rather than invertebrates. Using high-resolution paleoclimate reconstructions (CHELSA-TraCE21k; 21,000 BP–present), we tested whether non-cave localities of endemic beetles in the western Balkans are non-randomly associated with local climatic stability. For four bioclimatic variables, we quantified temporal variability using three metrics (SD, range, detrended SD) and defined stability islands as cells in the most stable quartile relative to their neighbourhood at three spatial scales (3 × 3, 5 × 5, 9 × 9). We tested whether 578 endemic-locality cells were enriched in stability islands, against elevation-matched null models. Annual mean temperature produced the highest raw frequency of endemic localities in stability islands, but this pattern was not significant after elevation control. In contrast, endemic localities showed a modest but consistent enrichment in annual precipitation stability islands (observed 9.7–10.7% vs. null 7.3–8.5%; p = 0.01–0.03) across neighbourhood sizes. At the 3 × 3 scale, 60 endemic localities fell within precipitation-stability islands; of them, 20 were outside current protected areas—indicating conservation gaps where minor boundary revisions could enable protection of endemic beetles’ habitats in precipitation-stable sites. Full article
(This article belongs to the Special Issue Advances in Community Ecology: Interactions, Dynamics, and Diversity)
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27 pages, 6585 KB  
Article
Synergistic Changes in Wetland Carbon Storage and Habitat Quality in the Western Part of Jilin Province and Their Response to Landscape Patterns
by Pengfei Bao, Yingpu Wang, Yanhui Chen and Jiping Liu
Land 2026, 15(5), 736; https://doi.org/10.3390/land15050736 (registering DOI) - 26 Apr 2026
Abstract
As a key component of ecosystems, the synergistic relationship between wetland carbon storage and habitat quality is vital for maintaining ecological functions, and its evolution is profoundly influence by changes in wetlands. This study focuses on wetlands in western Jilin Province. Based on [...] Read more.
As a key component of ecosystems, the synergistic relationship between wetland carbon storage and habitat quality is vital for maintaining ecological functions, and its evolution is profoundly influence by changes in wetlands. This study focuses on wetlands in western Jilin Province. Based on four sets of land use data from 2010 to 2023 and utilizing the InVEST model, combined with methods such as spatial autocorrelation, the Coupled Coordination Degree Model, and the GeoDetector, the study analyzed the co-variation of carbon storage and habitat quality, as well as their response to landscape patterns. The study found that between 2010 and 2023, the wetland area increased by a net 858.13 km2, and landscape fragmentation was generally alleviated, although local connectivity continued to degrade. Regional carbon storage increased by 68.1%, totaling 7.43 × 106 Mg, while the habitat quality index exhibited high spatiotemporal stability, fluctuating marginally between 0.609 and 0.621. Spatially, high-value areas remained primarily concentrated within nature reserves. Results of bivariate spatial autocorrelation analysis revealed a strengthening of spatial positive autocorrelation between carbon storage and habitat quality, with Moran’s I increasing from 0.410 to 0.501. The coupled coordination degree model further confirmed that the level of synergy between the two services exhibited a pattern of higher values in the north and lower values in the south, and that areas of high coordination expanded significantly outward following restoration projects. GeoDetector analysis indicates that the largest patch index is the core factor driving the synergistic development of ecosystem services. The results also suggest that the integrity of core wetland patches and a heterogeneous landscape pattern can promote the synergistic improvement of carbon storage and habitat quality through boundary effects and habitat complementarity. Full article
(This article belongs to the Special Issue Carbon Cycling and Carbon Sequestration in Wetlands)
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15 pages, 3268 KB  
Article
Assessing Climate-Driven Range Dynamics of Hippophae tibetana Schltdl. Using an Ensemble Modeling Approach
by Tao Ma, Biyu Liu, Danping Xu and Zhihang Zhuo
Diversity 2026, 18(5), 257; https://doi.org/10.3390/d18050257 (registering DOI) - 26 Apr 2026
Abstract
Hippophae tibetana Schltdl. is a cold-tolerant deciduous shrub endemic to the Tibetan Plateau, playing a vital ecological role in high-altitude environments. This study utilized the Biomod2 platform to model its current and future potential distribution under climate change, integrating 34 environmental variables across [...] Read more.
Hippophae tibetana Schltdl. is a cold-tolerant deciduous shrub endemic to the Tibetan Plateau, playing a vital ecological role in high-altitude environments. This study utilized the Biomod2 platform to model its current and future potential distribution under climate change, integrating 34 environmental variables across bioclimatic, topographic, edaphic, anthropogenic, and ultraviolet (UV) dimensions. Among ten candidate species distribution models (SDMs), the random forest (RF) algorithm exhibited the highest predictive accuracy and stability. An ensemble model (EM) combining RF, GBM, MARS, and FDA further improved predictive performance (ROC = 0.992, TSS = 0.923, and Kappa = 0.886). Key determinants of habitat suitability included altitude, temperature, UV radiation, and biodiversity, with RF response curves revealing distinct nonlinear thresholds. Optimal suitability occurred at around a 4000 m elevation, decreasing beyond this range, while temperature and UV exhibited similar unimodal responses. Under the SSP2-4.5 climate scenario, the suitable habitat is projected to expand from the 2050s to the 2090s, particularly in eastern Qinghai, southwestern Gansu, northwestern Sichuan, and central–southern Tibet. The species’ distribution centroid is anticipated to shift southwestward toward Qinghai Province, with more rapid migration projected after the 2050s. These findings underscore the complex interplay of environmental factors shaping H. tibetana distribution and offer valuable insights for conservation planning in the ecologically fragile Tibetan Plateau. Full article
(This article belongs to the Section Biodiversity Conservation)
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18 pages, 10471 KB  
Article
Environmental DNA Metabarcoding Reveals Hidden Fish Diversity and Strong Habitat Partitioning Across Coastal Ecosystems in the Con Dao Archipelago, Vietnam
by Hung Manh Pham, Jacques Panfili, Huy Duc Hoang, Monique Simier, Masaki Miya and Jean-Dominique Durand
Diversity 2026, 18(5), 255; https://doi.org/10.3390/d18050255 (registering DOI) - 26 Apr 2026
Abstract
The Con Dao archipelago hosts the oldest MPA in Vietnam and is recognized as a regional marine biodiversity hotspot. Here, we applied environmental DNA (eDNA) metabarcoding to assess coastal fish diversity across four major habitat types: coral reefs, seagrass beds, mangroves, and a [...] Read more.
The Con Dao archipelago hosts the oldest MPA in Vietnam and is recognized as a regional marine biodiversity hotspot. Here, we applied environmental DNA (eDNA) metabarcoding to assess coastal fish diversity across four major habitat types: coral reefs, seagrass beds, mangroves, and a harbour in the Con Dao archipelago. Using MiFish-U 12S primers at eight stations, we detected 282 operational taxonomic units, corresponding to 144 fish taxa. Fish assemblages exhibited strong habitat structuring: community composition differed markedly among habitats, with minimal overlap. Only three species were shared across all habitats. Multivariate analyses confirmed that habitat type, rather than spatial distance among sites, was the primary driver of community differentiation. Mangrove and seagrass supported distinct assemblages that were underrepresented in existing species checklists and MPA management frameworks. Notably, eDNA detected cryptic and non-commercial species overlooked by conventional survey methods. These results substantially expand the known fish diversity of the Con Dao Archipelago and highlight the need to incorporate habitat heterogeneity, particularly non-reef ecosystems, into MPA design and monitoring. Although eDNA metabarcoding is subject to amplification biases and limited taxonomic resolution in reference databases, it offers a powerful complement to traditional surveys for characterizing under-sampled habitats. Full article
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15 pages, 663 KB  
Article
Fitness Consequences of Urban Green Space Management in Eurasian Tree Sparrow (Passer montanus) in Madrid, Spain
by Beatriz Martínez-Miranzo, Alejandro López-García, Ana Payo-Payo, José I. Aguirre and Eva Banda
Urban Sci. 2026, 10(5), 229; https://doi.org/10.3390/urbansci10050229 (registering DOI) - 25 Apr 2026
Abstract
In urban areas, green spaces have become the main refuge for biodiversity, providing essential habitat and resources for urban-adapted species. However, scientific evidence on the fitness consequences of urban green space management for urban populations remains scarce, limiting our ability to design successful [...] Read more.
In urban areas, green spaces have become the main refuge for biodiversity, providing essential habitat and resources for urban-adapted species. However, scientific evidence on the fitness consequences of urban green space management for urban populations remains scarce, limiting our ability to design successful conservation and management strategies. Here, we assess the fitness consequences of different levels of management practices in green spaces (i.e., high for areas with continuous intervention such as regular mowing and irrigation, and low for areas with minimal, sporadic maintenance) based on a 19-year long-term monitoring of the Eurasian Tree Sparrow (Passer montanus), a species with high behavioural plasticity in response to human-altered habitats. We formulated a unistate capture–mark–recapture model to estimate age-dependent survival while accounting for uncertainty in recapture probability. Furthermore, by means of GLMMs, we tested if the level of management influences reproductive parameters (i.e., breeding failure, number of eggs, nestlings, fledglings, brood number from the same year, breeding success). We found that high urban green space management caused a decline in adult survival, but we found no effect on juvenile survival. We also found lower breeding failure, a greater number of eggs, and larger brood numbers in the low management areas, but no differences were found in the number of nestlings and fledglings. Consequently, we found no differences in overall breeding success. Our results highlight the reduction in survival in a near-threatened passerine species due to routine green urban space management, in addition to differences in reproductive parameters depending on the degree of green urban space management. Overall, we confirm that the same species show several reproductive strategies with different breeding effort to reach similar breeding success, whatever the human context is. However, birds pay the cost in adult survival, and probably in shortening life span. Therefore, the management of urban green spaces has a negative impact on biodiversity in cities. It is necessary to review the management practices of these urban areas and promote practices that are friendly to biodiversity. Full article
(This article belongs to the Special Issue Biodiversity in Urban Landscapes)
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23 pages, 9077 KB  
Article
Spatiotemporal Variations of Phytoplankton Groups and Their Relationships with Mesoscale Eddies in the Northwest Pacific
by Jian Wen, Pengchao Jin, Lichuan Zhang, Xinjun Chen, Yang Zhang and Wei Yu
J. Mar. Sci. Eng. 2026, 14(9), 789; https://doi.org/10.3390/jmse14090789 (registering DOI) - 25 Apr 2026
Abstract
The complex ocean dynamics in the Northwest Pacific high-seas fishing grounds shape phytoplankton communities, which serve as the foundation for commercially pelagic species. This study investigates how mesoscale eddies modulate phytoplankton groups’ structures by analyzing the spatiotemporal evolution of eight phytoplankton functional types [...] Read more.
The complex ocean dynamics in the Northwest Pacific high-seas fishing grounds shape phytoplankton communities, which serve as the foundation for commercially pelagic species. This study investigates how mesoscale eddies modulate phytoplankton groups’ structures by analyzing the spatiotemporal evolution of eight phytoplankton functional types (PFTs) from 2014 to 2023. Utilizing high-resolution AI-driven model data (AIGD-PFT) and a normalized radial distance grid (0–2 R), we quantified PFTs concentrations within cyclonic (CE) and anticyclonic (AE) eddies, validated by Biogeochemical Argo (BGC-Argo) and in situ measurements. Results reveal that diatoms and dinoflagellates dominate the region, accounting for 88.7% of phytoplankton with distinct seasonal peaks in spring and autumn, respectively. CE significantly enhance diatom and dinoflagellate concentration, particularly within the 0.4 R–1.2 R dynamic ring, while AE favor the aggregation of picophytoplankton, such as Prochlorococcus, in mid-to-low latitudes. Correlation analysis indicates that diatom abundance is strongly linked to dissolved oxygen and negatively correlated with sea surface height. We conclude that mesoscale eddies drive the spatial remodeling of phytoplankton communities by altering local physical and nutrient conditions. These findings provide a critical ecological context for assessing the habitat distribution and sustainable management of North Pacific fisheries across different trophic levels. Full article
(This article belongs to the Special Issue Ecology and Dynamics of Marine Plankton)
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Article
Gut Microbiota Assembly and Host Phenotypic Variation: Core Adaptive Strategies of Triplophysa yarkandensis (Cypriniformes: Nemacheilidae) to Saline–Alkaline Stress
by Huijie Chen, Weicheng Wang, Xinyuan Ye, Li Feng, Mengbo Wang, Tingyu Xie, Daoquan Ren, Yong Song, Shengao Chen, Chi Zhang and Wentao Zhu
Biology 2026, 15(9), 677; https://doi.org/10.3390/biology15090677 (registering DOI) - 25 Apr 2026
Abstract
Triplophysa yarkandensis (Cypriniformes: Nemacheilidae), a rare endemic fish in the Tarim River Basin, Xinjiang, China, plays a pivotal role in maintaining the stability of plateau saline–alkaline aquatic ecosystems, yet its survival is increasingly threatened by habitat salinization. However, the multi-dimensional synergistic adaptation mechanisms [...] Read more.
Triplophysa yarkandensis (Cypriniformes: Nemacheilidae), a rare endemic fish in the Tarim River Basin, Xinjiang, China, plays a pivotal role in maintaining the stability of plateau saline–alkaline aquatic ecosystems, yet its survival is increasingly threatened by habitat salinization. However, the multi-dimensional synergistic adaptation mechanisms linking its phenotypic variation, intestinal structure, and associated microbial communities to extreme saline–alkaline stress remain poorly understood. In this study, we innovatively integrated morphological/intestinal histological characterization, 16S rRNA gene sequencing, and microbial ecological analyses (co-occurrence networks and assembly processes) to systematically decode its adaptive strategies. Results revealed that T. yarkandensis exhibits a streamlined body shape, morphological variability, and elongated intestinal villi that may support locomotion and nutrient/ion uptake under osmotic stress. Its gut exerts a stringent selective filter, driving distinct differentiation between water and gut microbial communities—with gut-enriched core taxa (Aurantimicrobium and Aestuariivirga) and functional pathways (unsaturated fatty acid biosynthesis and ABC transporters) specialized for osmoregulation. Notably, the water microbial assembly is dominated by stochastic processes, while the gut assembly relies on host-driven deterministic selection, forming a habitat-specific adaptive pattern. These findings uncover the synergistic adaptation system of host phenotype and gut microbiota for survival in extreme saline–alkaline habitats, advancing our understanding of fish–microbe co-evolution in extreme ecosystems and providing critical theoretical support for the conservation of rare plateau fish, as well as guidance for the utilization of saline–alkaline water resources in aquaculture. Full article
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