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16 pages, 5660 KiB  
Article
A Revision of Dispersal Strategies in Freshwater Sponges: The Journey of the Ponto-Caspian Sponge Rosulaspongilla rhadinaea (Porifera: Spongillidae), a New Alien Species for Europe
by José Luis Carballo, José Antonio Cruz-Barraza and José Carlos García-Gómez
Limnol. Rev. 2024, 24(4), 577-592; https://doi.org/10.3390/limnolrev24040034 - 3 Dec 2024
Viewed by 1290
Abstract
Alien species constitute one of the main threats to freshwater ecosystems, negatively impacting biodiversity, economy, and ecosystem services. Here, we use morphological and genetic data to show the presence of a new alien freshwater sponge in Europe, Rosulaspongilla rhadinaea, a Ponto-Caspian species [...] Read more.
Alien species constitute one of the main threats to freshwater ecosystems, negatively impacting biodiversity, economy, and ecosystem services. Here, we use morphological and genetic data to show the presence of a new alien freshwater sponge in Europe, Rosulaspongilla rhadinaea, a Ponto-Caspian species which recently has been found in the fluvial port of Seville (Guadalquivir River, Spain). We also reviewed the mechanisms and adaptations of freshwater sponges for dispersal. The gemmule is the key structure for understanding their life history, evolution, and dispersal capacity, since their high salinity tolerance may have made possible the spreading of these sponges on the hulls of ocean-going ships that frequent freshwater ports. Once established, they are dispersed via river currents and intraregional boat traffic through the network of interconnected channels, which act as invasion corridors. Transport via phoresy attached to mobile animal vectors such as birds (especially migrating birds) has also been demonstrated in several sponge species. Gemmules may be attached on the feathers and scales, or even to be transported in the guts of these animals, followed by defecation of viable gemmules. Transport associated with other invasive freshwater species, such as mussels, cannot be ruled out. The scarcity of taxonomic studies of freshwater sponges in the Iberian Peninsula might explain why the species had not been recorded. Full article
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16 pages, 6300 KiB  
Article
Ecological Risk Assessment of Saltwater Intrusion and Urban Ecosystem Management in Shenzhen City
by Rencai Dong, Yue Cai, Xueye Chen, Cunjin Wang and Anxin Lian
Land 2024, 13(9), 1338; https://doi.org/10.3390/land13091338 - 23 Aug 2024
Cited by 2 | Viewed by 1750
Abstract
With continued sea level rise and over-exploitation, saline water extends farther inland, causing changes in soil salinity and water quality and leading to permanent land salinization and ecosystem damage. Saltwater intrusion (SWI), causing numerous ecosystem problems and disasters, brings risk to urban ecosystems [...] Read more.
With continued sea level rise and over-exploitation, saline water extends farther inland, causing changes in soil salinity and water quality and leading to permanent land salinization and ecosystem damage. Saltwater intrusion (SWI), causing numerous ecosystem problems and disasters, brings risk to urban ecosystems in coastal cities. Ecological risk, in the Greater Bay Area in China, should be assessed based on the effect of SWI status on ecosystem health. In this study, we built a new ecological risk-assessment model based on the geographic information system (GIS) technique and spatial data. At the conceptual level, four main stressors were identified based on literature reading and fieldwork. Four stress factors (SFs) were thoroughly investigated, namely, SF1: the intensity gradient immersed in saltwater; SF2: the mountain phreatic water supply; SF3: the salinity tolerance of urban greenbelt vegetation; and SF4: the supply capacity of irrigation water to suppress saline water. After a comprehensive evaluation using GIS and the analytic hierarchy process (AHP), we mapped and assessed the ecological risk level of the urban greenbelt for the SWI. Our results showed that the area of urban green space affected by the SWI was approximately 49.31 km2, almost 12.05%. Ecological risk was sorted into five ranks: (1) very low risk 47.53%, (2) low risk 26.29%, (3) medium risk 22.92%, (4) high risk 2.45%, and (5) very high risk (0.8%). The ecological infrastructure of sponges should include freshwater conservation in coastal cities, and more attention should be paid to fresh groundwater discharge from coastal ecosystems in Shenzhen. Full article
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22 pages, 7692 KiB  
Article
Micro-Catchments, Macro Effects: Natural Water Retention Measures in the Kylldal Catchment, Germany
by Silke M. Nauta, Maarten J. Waterloo, Anouk I. Gevaert, Jos de Bijl and Paul Brotherton
Water 2024, 16(5), 733; https://doi.org/10.3390/w16050733 - 29 Feb 2024
Cited by 1 | Viewed by 2980
Abstract
Floods are among the most devastating and financially burdensome natural disasters in Europe. The combined impact of climate change and land use change is expected to exacerbate and intensify the destructive consequences of river floods. In this study, we analysed the effects of [...] Read more.
Floods are among the most devastating and financially burdensome natural disasters in Europe. The combined impact of climate change and land use change is expected to exacerbate and intensify the destructive consequences of river floods. In this study, we analysed the effects of wetland restoration on peak and base flows and on water quality in the Kylldal catchment of the Kyll River in the German Middle Mountains using the Soil and Water Assessment Tool+ (SWAT+). Monthly median daily discharge increases varied between 3% and 33% in the studied (micro)catchments. The higher median flow rates show that discharge peaks were attenuated and distributed over a longer period, making both extreme peak flows and low flows less common. Peak flows tended to decrease, with the largest effects between late fall and early spring when peak flow values decreased by up to 18%. The annual maximum peak flows in each of the three micro-catchments decreased by 12–24% on average. The occurrence of daily average flow rates larger than 1 m3 s−1 was up to 45% lower after wetland restoration. Low flows increased by up to 21% and 13% in the summer and fall, respectively, which suggests that drought risk also decreases after wetland restoration. Average nitrogen exports decreased by 38–50% in the project areas and by 20% at the catchment level. Average phosphorus exports decreased by 52–67% in the project areas and by 25% at the catchment level. The study highlights the potential of wetland restoration for improving hydrological services, mitigating flood risks, and enhancing water quality. Restoring and maintaining freshwater ecosystems and their natural sponge functions is crucial for effectively managing water resources and addressing the challenges posed by climate change and land use changes. Full article
(This article belongs to the Special Issue The Impact of Climate Change and Land Use on Water Resources)
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13 pages, 9942 KiB  
Article
Anomalies of Sponge Spicules: Exploring Links to Environmental Pollution
by Stefan Andjus, Bojana Tubić, Božica Vasiljević, Vera Nikolić and Momir Paunović
Water 2024, 16(2), 332; https://doi.org/10.3390/w16020332 - 19 Jan 2024
Cited by 1 | Viewed by 2601
Abstract
The aim of this study was to assess the frequency of spicule malformations in freshwater sponges in relation to selected environmental parameters of the streams and the presence of river pollutants. A total of 50 sponge samples were collected from ten rivers in [...] Read more.
The aim of this study was to assess the frequency of spicule malformations in freshwater sponges in relation to selected environmental parameters of the streams and the presence of river pollutants. A total of 50 sponge samples were collected from ten rivers in Serbia. Selected parameters of the water varied considerably at every site where sponges were found. After spicule preparation, the samples were subjected to morphological analysis by light and scanning electron microscopy, and the number of anomalies were recorded (spicules with bulbous enlargements, sharply bent, bifurcated, scissor- and cross-like, and t-shaped). The frequencies and types of malformations within the analyzed specimens varied from 1 to 100 per 1000 spicules, with an average number of 12 per 1000. The main types of anomalies were single- and double-bent spicules. The highest number of anomalies was found in a specimen of Eunapius fragilis collected at Markovac (Velika Morava River), and the lowest number was found in a specimen of Ephydatia fluviatilis from Kanjiža (Tisa River). The sites with the lowest and the highest numbers of anomalies showed statistically significant differences in concentrations of ammonia, orthophosphates, sodium, chloride, manganese, and lead. This study indicates that several pollutants potentially affect the occurrence of spicule anomalies. Full article
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17 pages, 3624 KiB  
Review
Freshwater Sponges as a Neglected Reservoir of Bacterial Biodiversity
by Angelina Lo Giudice and Carmen Rizzo
Microorganisms 2024, 12(1), 25; https://doi.org/10.3390/microorganisms12010025 - 22 Dec 2023
Cited by 7 | Viewed by 2710
Abstract
Freshwater sponges (Spongillida: Demospongiae), including more than 240 described species, are globally distributed in continental waters (except for Antarctica), where they cover both natural and artificial surfaces. However, fragmentary studies have targeted their microbiome, making it difficult to test hypotheses about sponge-microbe specificity [...] Read more.
Freshwater sponges (Spongillida: Demospongiae), including more than 240 described species, are globally distributed in continental waters (except for Antarctica), where they cover both natural and artificial surfaces. However, fragmentary studies have targeted their microbiome, making it difficult to test hypotheses about sponge-microbe specificity and metabolic relationships, along with the environmental factors playing key roles in structuring the associated microbial communities. To date, particular attention has been paid to sponges (family Lubomirskiidae) that are endemic to Lake Baikal. Few other freshwater sponge species (e.g., Ephydatia spp., Eunapius spp., and Spongilla lacustris), from lakes and rivers spanning from Europe to South and North America, have been targeted for microbiological studies. Representatives of the phyla Proteobacteria, Bacteroidetes, and Actinobacteria largely predominated, and high differences were reported between the microbiome of freshwater and marine sponges. Several bacterial strains isolated from freshwater sponges can produce bioactive compounds, mainly showing antibiotic activities, with potential application in biotechnology. Understanding the roles played by sponge microbiomes in freshwater ecosystems is still in its infancy and has yet to be clarified to disentangle the ecological and evolutionary significance of these largely under-investigated microbial communities. This review was aimed at providing the main available information on the composition and biotechnological potential of prokaryotic communities associated with healthy freshwater sponges, as a neglected component of the global sponge microbiome, to stimulate researchers interested in the field. Full article
(This article belongs to the Special Issue Latest Review Papers in Environmental Microbiology 2023)
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20 pages, 6487 KiB  
Article
The RNA Viruses in Samples of Endemic Lake Baikal Sponges
by Tatyana V. Butina, Igor V. Khanaev, Ivan S. Petrushin, Artem N. Bondaryuk, Olga O. Maikova and Yurij S. Bukin
Diversity 2023, 15(7), 835; https://doi.org/10.3390/d15070835 - 4 Jul 2023
Cited by 3 | Viewed by 1724
Abstract
Sponges are unusual representatives of the animal kingdom; their viromes, as part of the associated community, began to be studied quite recently, and, accordingly, these studies are gaining momentum. The diversity of viruses in sponges is high, and they most likely play a [...] Read more.
Sponges are unusual representatives of the animal kingdom; their viromes, as part of the associated community, began to be studied quite recently, and, accordingly, these studies are gaining momentum. The diversity of viruses in sponges is high, and they most likely play a significant role in the composition of the sponge holobiont, especially under stress conditions. The objects of our metagenomic study were RNA viruses of two common endemic species of Baikal sponges, Lubomirskia baikalensis and Baikalospongia bacillifera. As a result of viral RNA sequencing, we were able to identify fragments of viral genomes related to those from the RefSeq NCBI complete viral genome database. Most of the similar genomes belonged to viruses isolated from various invertebrates; some of the scaffolds were related to known plant viruses, and one of them was related to a vertebrate virus. The similarity of the putative proteins of viral scaffolds from the Baikal sponges with proteins of known viruses turned out to be low (20.7–67.3%), indicating the detection of novel viruses. The samples of diseased and visually healthy sponges were clustered separately, suggesting a shift in sponge virome composition during the course of the disease. In a comparative analysis, the viromes of the Baikal and marine sponges differed significantly, demonstrating the influence of the host species, habitat, and geographical location on virome composition in the sponge holobiont. Full article
(This article belongs to the Special Issue Viral Diversity in Marine and Freshwater)
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23 pages, 5712 KiB  
Review
Landscape and Climate Changes in Southeastern Amazonia from Quaternary Records of Upland Lakes
by José Tasso Felix Guimarães, Prafulla Kumar Sahoo, Pedro Walfir Martins e Souza-Filho, Marcio Sousa da Silva, Tarcísio Magevski Rodrigues, Edilson Freitas da Silva, Luiza Santos Reis, Mariana Maha Jana Costa de Figueiredo, Karen da Silva Lopes, Aline Mamede Moraes, Alessandro Sabá Leite, Renato Oliveira da Silva Júnior, Gabriel Negreiros Salomão and Roberto Dall’Agnol
Atmosphere 2023, 14(4), 621; https://doi.org/10.3390/atmos14040621 - 24 Mar 2023
Cited by 8 | Viewed by 2853
Abstract
The upland lakes (ULs) in Carajás, southeastern Amazonia, have been extensively studied with respect to their high-resolution structural geology, geomorphology, stratigraphy, multielement and isotope geochemistry, palynology and limnology. These studies have generated large multiproxy datasets, which were integrated in this review to explain [...] Read more.
The upland lakes (ULs) in Carajás, southeastern Amazonia, have been extensively studied with respect to their high-resolution structural geology, geomorphology, stratigraphy, multielement and isotope geochemistry, palynology and limnology. These studies have generated large multiproxy datasets, which were integrated in this review to explain the formation and evolution of the ULs. These ULs evolved during the Pliocene–Pleistocene periods through several episodes of a subsidence of the lateritic crust (canga) promoted by fault reactivation. The resulting ULs were filled under wet/dry and warm/cool paleoclimatic conditions during the Pleistocene period. The multielement geochemical signature indicates that the detrital sediments of these ULs were predominantly derived from weathered canga and ferruginous soils, while the sedimentary organic matter came from autochthonous (siliceous sponge spicules, algae, macrophytes) and allochthonous (C3/C4 canga and forest plants and freshwater dissolved organic carbon) sources. Modern pollen rain suggests that even small ULs can record both the influence of canga vegetation and forest signals; thus, they can serve as reliable sites to provide a record of vegetation history. The integrated data from the sedimentary cores indicate that the active ULs have never dried up during the last 50 ka cal BP. However, subaerial exposure occurred in filled ULs, such as the Tarzan mountain range during the Last Glacial Maximum (LGM) and the Bocaína and S11 mountain ranges in the mid-Holocene period, due to the drier conditions. Considering the organic proxies, the expansion of C4 plants has been observed in the S11 and Tarzan ULs during dry events. Extensive precipitation of siderite in UL deposits during the LGM indicated drier paleoenvironmental conditions, interrupting the predominantly wet conditions. However, there is no evidence of widespread forest replacement by savanna in the Carajás plateau of southeastern Amazonia during the late Pleistocene and Holocene. Full article
(This article belongs to the Special Issue Paleoclimate Reconstruction)
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20 pages, 2338 KiB  
Article
Toxic Effect of Anionic Surfactants on Freshwater Sponge Lubomirskia baikalensis and Its Endosymbiotic Microalgae Chlorella sp.
by Alyona Alexandrovna Nikonova, Igor Borisovich Mizandrontsev, Boris Nikolaevich Bazhenov, Igor Veniaminovich Khanaev, Olesya Viktorovna Shabalina, Alexandra Alexandrovna Afanasyeva, Tatiana Nikolaevna Avezova, Anna Nikolaevna Chindyavskaya, Alexander Nikolaevich Bityutsky, Andrey Yurievich Kan, Leonid Gennadievich Karikh, Kristina Sergeevna Dubrova, Svetlana Semyonovna Vorobyeva and Olga Yurievna Glyzina
Diversity 2023, 15(1), 77; https://doi.org/10.3390/d15010077 - 6 Jan 2023
Cited by 8 | Viewed by 2747
Abstract
A number of reports on sponge diseases, including from Lake Baikal, have increased dramatically all over the world in recent years. Herewith, there are various hypotheses for sponge mortality. Lubomirskia baikalensis (phylum Porifera, order Spongillida) is a unique endemic freshwater sponge of Lake Baikal [...] Read more.
A number of reports on sponge diseases, including from Lake Baikal, have increased dramatically all over the world in recent years. Herewith, there are various hypotheses for sponge mortality. Lubomirskia baikalensis (phylum Porifera, order Spongillida) is a unique endemic freshwater sponge of Lake Baikal that contains a complex community of eukaryotic and prokaryotic endosymbiotic microorganisms. In this work, we present the first results for the effect of anionic surfactants viz. linear alkylbenzene sulphonates (LAS) at low 10 and 20 µg L−1 concentrations on Baikal sponge species and their symbiotic community as an experimental model. A new toxicity test protocol under conditions close to natural is proposed. It uses the sponge amoebocytes called as SA1-cells, which contain eukaryotic green microalgae Chlorella sp. These SA1-cells are shown to be representative indicator in assessing the impact of anionic surfactants. The acute toxic effect resulted in 97–100% sponge cell death in less than 48 h, as well as 100% symbiotic microalgae Chlorella sp. death over 72 h was noted under LAS solution (20 μg L−1) exposure during in vivo experiments. This includes the cell membrane fatty acid changes, change in the cell sizes, cell swelling, and lysis. Long term exposure to LAS solution (10 μg L−1) reflected in cellular stress (oxidative stress) and accompanied by malondialdehyde formation (0.16–2.0 μg g−1 of dry weight) during 14-day exposure was noted. Oxidative stress and mortality of L. baikalensis are associated with their low antioxidant activity. Trolox-equivalent antioxidant capacity (TEAC) found in the range from 0.00031 to 0.00077 Trolox equivalents for these freshwater sponges. Full article
(This article belongs to the Special Issue Diversity and Ecology of Freshwater Lake Microbial Communities)
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16 pages, 4023 KiB  
Article
Janthinobacterium sp. Strain SLB01 as Pathogenic Bacteria for Sponge Lubomirskia baikalensis
by Lubov Chernogor, Marina Eliseikina, Ivan Petrushin, Ekaterina Chernogor, Igor Khanaev and Sergei I. Belikov
Pathogens 2023, 12(1), 8; https://doi.org/10.3390/pathogens12010008 - 21 Dec 2022
Cited by 2 | Viewed by 2700
Abstract
Sponges (phylum Porifera) are ancient, marine and inland water, filter feeding metazoans. In recent years, diseased sponges have been increasingly occurring in marine and freshwater environments. Endemic freshwater sponges of the Lubomirskiidae family are widely distributed in the coastal zone of Lake Baikal. [...] Read more.
Sponges (phylum Porifera) are ancient, marine and inland water, filter feeding metazoans. In recent years, diseased sponges have been increasingly occurring in marine and freshwater environments. Endemic freshwater sponges of the Lubomirskiidae family are widely distributed in the coastal zone of Lake Baikal. The strain Janthinobacterium sp. SLB01 was isolated previously from the diseased sponge Lubomirskia baikalensis (Pallas, 1776), although its pathogenicity is still unknown. The aim of this study was to confirm whether the Janthinobacterium sp. strain SLB01 is the pathogen found in Baikal sponge. To address this aim, we infected the cell culture of primmorphs of the sponge L. baikalensis with strain SLB01 and subsequently reisolated and sequenced the strain Janthinobacterium sp. PLB02. The results showed that the isolated strain has more than 99% homology with strain SLB01. The genomes of both strains contain genes vioABCDE of violacein biosynthesis and floc formation, for strong biofilm, in addition to the type VI secretion system (T6SS) as the main virulence factor. Based on a comparison of complete genomes, we showed the similarity of the studied bacterial strains of Janthinobacterium spp. with the described strain of Janthinobacterium lividum MTR. This study will help expand our understanding of microbial interactions and determine one of the causes in the development of diseases and death in Baikal sponges. Full article
(This article belongs to the Section Bacterial Pathogens)
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9 pages, 1825 KiB  
Article
The Utilityof 28S rDNA for Barcoding of Freshwater Sponges (Porifera, Spongillida)
by Valeria Itskovich, Oxana Kaluzhnaya and Olga Glyzina
Diversity 2022, 14(12), 1126; https://doi.org/10.3390/d14121126 - 15 Dec 2022
Cited by 2 | Viewed by 2454
Abstract
Sponges (Porifera, Spongillida) make up the bulk of the benthic biomass in Lake Baikal and are represented by the family Lubomirskiidae, a collection of endemic species, and several species of the cosmopolitan family Spongillidae. We conducted an analysis of the D3 domain of [...] Read more.
Sponges (Porifera, Spongillida) make up the bulk of the benthic biomass in Lake Baikal and are represented by the family Lubomirskiidae, a collection of endemic species, and several species of the cosmopolitan family Spongillidae. We conducted an analysis of the D3 domain of the 28S rDNA of 16 freshwater sponge species. Based on molecular data, we were able to identify all of the collected Spongillidae specimens whose identification was difficult due to the lack of gemmules. Phylogenetic trees have shown that Ephydatia muelleri, Spongilla lacustris, and Eunapius fragilis formed monophyletic clades, and the D3 domain of the 28S rDNA can be used for their DNA barcoding. For the Baikal sponges, the use of this marker is important since the gemmule-less Spongillidae and Lubomirskiidae are, in some cases, indistinguishable from each other in morphology. The 28S rDNA has been shown to be useful for family and species-level identification of freshwater sponges within the Spongillida. Full article
(This article belongs to the Section Freshwater Biodiversity)
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17 pages, 4694 KiB  
Article
Aquatic Insects in Habitat-Forming Sponges: The Case of the Lower Mekong and Conservation Perspectives in a Global Context
by Nisit Ruengsawang, Narumon Sangpradub and Renata Manconi
Diversity 2022, 14(11), 911; https://doi.org/10.3390/d14110911 - 27 Oct 2022
Cited by 5 | Viewed by 3342
Abstract
Shallow water sponges settled on a raft along the Pong River (Lower Mekong Basin, Thailand) were investigated to highlight the taxonomic richness, composition, relative abundance and lifestyle of sponge-dwelling aquatic Insecta. The three-dimensional biogenic structures of the model sponges hosted 4 orders of [...] Read more.
Shallow water sponges settled on a raft along the Pong River (Lower Mekong Basin, Thailand) were investigated to highlight the taxonomic richness, composition, relative abundance and lifestyle of sponge-dwelling aquatic Insecta. The three-dimensional biogenic structures of the model sponges hosted 4 orders of Insecta, belonging to 10 families and 19 genera/species, able to strictly coexist at the level of the sponges in aquiferous canals and/or at the body surface, and/or dwelling in the extracellular matrix. On the basis of the identified 379 larvae and pupae, Trichoptera and Diptera were found to be the dominant inhabitants of Corvospongilla siamensis (Demospongiae: Spongillida), endemic to Southeast Asia. In the focused lotic ecosystem, dominated by soft bottoms, sponges play a functional role. Insecta use sponges as a substratum, nursery ground, food source, and shelter microhabitat, protecting them from predation and environmental aggression. Moreover, their feeding behavior indicates the insects’ adaptive traits to recycle sponge siliceous spicules as a source of exogenous material to strengthen the larval–pupal cases and the digestive system. The results of the Thai sponge model contribute to the inventory of global engineering species richness, ecosystem types, and biogeographic diversity, thus raising awareness for freshwater biodiversity conservation. In this regard, the present data, along with the worldwide inventory, focus on sponges as (a) key habitat-forming species for aquatic insect assemblages, (b) ecosystem engineers in river/lake/wetland ecosystems, providing water purification, the processing of organic matter, recycling of nutrients, and freshwater–terrestrial coupling, and (c) promising candidates in restoration projects of tropical freshwater ecosystems by bioremediation. Full article
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11 pages, 2949 KiB  
Article
Janus Biopolymer Sponge with Porous Structure Based on Water Hyacinth Petiole for Efficient Solar Steam Generation
by Junying Li, Sheng Chen, Cuihuan Li, Mengyao Cao, Jiahui Mu, Haq Nawaz, Zhe Ling and Feng Xu
Int. J. Mol. Sci. 2022, 23(16), 9185; https://doi.org/10.3390/ijms23169185 - 16 Aug 2022
Cited by 13 | Viewed by 3286
Abstract
Solar-driven steam generation for desalination is a facile, sustainable, and energy-saving approach to produce clean freshwater. However, the complicated fabrication process, high cost, potential environmental impact, and salt crystallization of conventional evaporators limit their large-scale application. Herein, we present a sustainable Janus evaporator [...] Read more.
Solar-driven steam generation for desalination is a facile, sustainable, and energy-saving approach to produce clean freshwater. However, the complicated fabrication process, high cost, potential environmental impact, and salt crystallization of conventional evaporators limit their large-scale application. Herein, we present a sustainable Janus evaporator based on a biopolymer sponge from the water hyacinth petiole (WHP) for high-performance solar steam generation. The freeze-dried WHP maintained its original porous structure and aligned channels well, and therefore holds the capability for rapid water transport due to strong capillary action. The WHP coated with carbon nanotubes/ethyl cellulose paste on its surface (WHP-C) gains a good photothermal property, thus achieving an efficient solar steam generation with a rate of 1.50 kg m−2 h−1 under 1 sun irradiation. Moreover, the WHP-C after hydrophobic modification by fluorocarbon (WHP-CH) is endowed with high water repellency and exhibits good salt resistance during long-term solar desalination. Additionally, we demonstrate that a stable wet surface that enables efficient water supply and vapor escape is also significant to the successive desalination of a solar evaporator. Our work provides new insights into the high-value utilization of biomass waste, i.e., water hyacinth, and the development of sustainable interfacial solar evaporators for the environmentally friendly production of freshwater. Full article
(This article belongs to the Special Issue Bio-Polymer Materials and Bio-Refinery)
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13 pages, 2367 KiB  
Article
Isolation and Properties of the Bacterial Strain Janthinobacterium sp. SLB01
by Lubov Chernogor, Kseniya Bakhvalova, Alina Belikova and Sergei Belikov
Microorganisms 2022, 10(5), 1071; https://doi.org/10.3390/microorganisms10051071 - 23 May 2022
Cited by 12 | Viewed by 3795
Abstract
Bacteria of the genus Janthinobacterium are widespread in soils and freshwater ecosystems and belong to the phylum Proteobacteria. The Janthinobacterium sp. SLB01 strain was isolated from diseased freshwater Lubomirskia baicalensis (Pallas, 1776) sponge, and the draft genome was published previously. However, the properties [...] Read more.
Bacteria of the genus Janthinobacterium are widespread in soils and freshwater ecosystems and belong to the phylum Proteobacteria. The Janthinobacterium sp. SLB01 strain was isolated from diseased freshwater Lubomirskia baicalensis (Pallas, 1776) sponge, and the draft genome was published previously. However, the properties of the SLB01 strain are not known. The aim of the study is to describe some properties of the Janthinobacterium sp. SLB01 strain, isolated from L. baicalensis sponge. The identification of the SLB01 strain was established as Gram-negative, motile, rod-shaped, and psychrotolerant, with growth at 3 and 22 °C. We found that the SLB01 strain has proteolytic, lipolytic, and saccharolytic activity and can use citrates and reduce nitrates. The bacteria Janthinobacterium sp. SLB01 strain can grow, form biofilms, and produce the violet pigment violacein. We identified the pigments violacein and deoxyviolacein by chromatography and mass spectrometry. These metabolites may be of interest to biotechnology in the future. The studied characteristics of the Janthinobacterium sp. SLB01 strain are an important addition to previous studies of the genome of this strain. This study will help us to understand the relationship between the microbial communities of Lake Baikal and sponges. Full article
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23 pages, 2434 KiB  
Article
Metagenomic Assessment of DNA Viral Diversity in Freshwater Sponges, Baikalospongia bacillifera
by Tatyana V. Butina, Ivan S. Petrushin, Igor V. Khanaev and Yurij S. Bukin
Microorganisms 2022, 10(2), 480; https://doi.org/10.3390/microorganisms10020480 - 21 Feb 2022
Cited by 8 | Viewed by 3126
Abstract
Sponges (type Porifera) are multicellular organisms that give shelter to a variety of microorganisms: fungi, algae, archaea, bacteria, and viruses. The studies concerning the composition of viral communities in sponges have appeared rather recently, and the diversity and role of viruses in sponge [...] Read more.
Sponges (type Porifera) are multicellular organisms that give shelter to a variety of microorganisms: fungi, algae, archaea, bacteria, and viruses. The studies concerning the composition of viral communities in sponges have appeared rather recently, and the diversity and role of viruses in sponge holobionts remain largely undisclosed. In this study, we assessed the diversity of DNA viruses in the associated community of the Baikal endemic sponge, Baikalospongia bacillifera, using a metagenomic approach, and compared the virome data from samples of sponges and Baikal water (control sample). Significant differences in terms of taxonomy, putative host range of identified scaffolds, and functional annotation of predicted viral proteins were revealed in viromes of sponge B. bacillifera and the Baikal water. This is the evidence in favor of specificity of viral communities in sponges. The diversity shift of viral communities in a diseased specimen, in comparison with a visually healthy sponge, probably reflects the changes in the composition of microbial communities in affected sponges. We identified many viral genes encoding the proteins with metabolic functions; therefore, viruses in Baikal sponges regulate the number and diversity of their associated community, and also take a part in the vital activity of the holobiont, and this is especially significant in the case of damage (or disease) of these organisms in unfavorable conditions. When comparing the Baikal viromes with similar datasets of marine sponge (Ianthella basta), in addition to significant differences in the taxonomic and functional composition of viral communities, we revealed common scaffolds/virotypes in the cross-assembly of reads, which may indicate the presence of some closely related sponge-specific viruses in marine and freshwater sponges. Full article
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18 pages, 1417 KiB  
Article
Genome Analysis of the Janthinobacterium sp. Strain SLB01 from the Diseased Sponge of the Lubomirskia baicalensis
by Sergei I. Belikov, Ivan S. Petrushin and Lubov I. Chernogor
Curr. Issues Mol. Biol. 2021, 43(3), 2220-2237; https://doi.org/10.3390/cimb43030156 - 11 Dec 2021
Cited by 4 | Viewed by 3736
Abstract
The strain Janthinobacterium sp. SLB01 was isolated from the diseased freshwater sponge Lubomirskia baicalensis (Pallas, 1776) and the draft genome was published previously. The aim of this work is to analyze the genome of the Janthinobacterium sp. SLB01 to search for pathogenicity factors [...] Read more.
The strain Janthinobacterium sp. SLB01 was isolated from the diseased freshwater sponge Lubomirskia baicalensis (Pallas, 1776) and the draft genome was published previously. The aim of this work is to analyze the genome of the Janthinobacterium sp. SLB01 to search for pathogenicity factors for Baikal sponges. We performed genomic analysis to determine virulence factors, comparing the genome of the strain SLB01 with genomes of other related J. lividum strains from the environment. The strain Janthinobacterium sp. SLB01 contained genes encoding violacein, alpha-amylases, phospholipases, chitinases, collagenases, hemolysin, and a type VI secretion system. In addition, the presence of conservative clusters of genes for the biosynthesis of secondary metabolites of tropodithietic acid and marinocine was found. We present genes for antibiotic resistance, including five genes encoding various lactamases and eight genes for penicillin-binding proteins, which are conserved in all analyzed strains. Major differences were found between the Janthinobacterium sp. SLB01 and J. lividum strains in the spectra of genes for glycosyltransferases and glycoside hydrolases, serine hydrolases, and trypsin-like peptidase, as well as some TonB-dependent siderophore receptors. Thus, the study of the analysis of the genome of the strain SLB01 allows us to conclude that the strain may be one of the pathogens of freshwater sponges. Full article
(This article belongs to the Section Molecular Microbiology)
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