Search Results (7)

Coastal zones are critical areas of marine ecosystems, where biodiversity is a key ecological element for maintaining ecosystem stability and ensuring the sustainability of fishery resources. The Shengsi Ma’an Archipelago Marine Special Reserve features heterogeneous habitats such as rocky reefs, seaweed beds, and artificial aquaculture areas, which are significantly affected by human activities. This study focused on the nearshore waters of Lvhua Island within the reserve. Based on the degree of human disturbance, the study area was divided into five typical habitat types: cage culture area (A), intertidal seaweed bed (B), marine platform area (C), open waters (D), and mussel culture area (E). Environmental DNA (eDNA) technology was employed to analyze the characteristics of eukaryotic community structures across these habitats and their coupling mechanisms with environmental factors. The results showed that a total of 767,360 valid sequences were obtained from 15 seawater samples. Clustering into operational taxonomic units (OTUs) yielded 811 OTUs, taxonomically covering 50 phyla, 104 classes, 220 orders, 334 families, 435 genera, and 530 species. The number of OTUs shared across all habitats was 387. The intertidal seaweed bed (B) had the highest proportion of unique OTUs (4.8%) and showed significant differences (0.01 < p < 0.05) in OTU composition compared to the marine platform area (C) and the mussel culture area (E). Among the major dominant phyla, the abundance of Dinoflagellata across sites was A (74.56%) > E (68.32%) > B (62.15%) > C (58.74%) > D (55.21%). The abundance of Arthropoda across sites was D (27.34%) > C (19.98%) > B (17.89%) > E (9.17%) > A (8.25%). Each of the other sites had 1-2 dominant phyla. Among the major dominant genera, the abundance of an unclassified genus of Dinophyceae was B (41.39%) > C (23.31%) > D (22.03%) > E (19.27%) > A (18.56%). The genus Noctiluca was endemic to Site A, with an abundance of 39.98%. The genus Calanus was dominant in site D (26.17%). The genus Meganyctiphanes was unique to sites C (12.12%) and D (8.76%). The genus Ectopleura was unique to site A. The genus Botrylloides was unique to site E. The remaining genera were evenly distributed across sites without significant habitat specificity. Alpha diversity analysis revealed that the marine platform area (C) had the highest Shannon index (3.32 ± 0.22) and Pielou index (0.54 ± 0.04), while the mussel culture area (E) had the highest Chao1 index (578.96 ± 10.25). All diversity indices were lowest in the cage culture area (A). Principal coordinate analysis (PCoA) and ANOSIM tests indicated significant differences (p < 0.05) in eukaryotic community structures among different habitats. Samples from the seaweed bed clustered separately and were distant from other habitats. Redundancy analysis (RDA) showed that pH was the key environmental factor driving the differentiation of eukaryotic community structure. Temperature was negatively correlated with dissolved oxygen, while salinity was positively correlated with pH. The combined differences in environmental factors were the main drivers of eukaryotic community structure differentiation. In conclusion, this study clarifies the regulatory role of habitat type on the eukaryotic community structure in the nearshore waters of Ma’an Archipelago, confirming a negative correlation between human activity intensity and biodiversity, and a positive correlation between natural habitat complexity and biodiversity. The research findings provide scientific support for assessing the health of the marine ecosystem and formulating ecological conservation and management strategies in this region. Full article

Stocking and replenishing fish are crucial for the ecological restoration of aquatic biological resources. Since 2017, a long-term stocking program of Hypophthalmichthys molitrix and Aristichthys nobilis has been underway in the Xixi River basin of the Jiulong River. To understand the status of fishery resources following this long-term stocking program, field surveys were conducted every two months from October 2023 to October 2024. Traditional netting, resource assessment and environmental DNA (eDNA) analysis methods were used to conduct a comprehensive assessment of resource abundance, stocking contribution and ecological adaptability. The research revealed that the annual survival rates for H. molitrix and A. nobilis were 40.25% and 48.19%, respectively. The current numerical ratio of H. molitrix to A. nobilis stands at 1.97:1, indicating that the survival number of H. molitrix is better than that of A. nobilis. No mature gonads were observed in any sampled individuals, demonstrating that the current population is highly dependent on artificial replenishment. This study provides valuable data support for aquatic resource restoration and ecological management in the Jiulong River Basin. Full article

Assessing fishery resources is crucial for sustainable marine ecosystem management and the operation of fisheries. This study integrates trawl surveys, environmental DNA (eDNA) analysis, and scientific echo sounder techniques to analyze the fishery resource distribution of and seasonal variations in the East China Sea. Surveys were conducted in April, July, August, and November 2022, utilizing bottom trawl sampling, eDNA metabarcoding, and acoustic data collection. The results revealed temporal differences in species composition, with crustaceans dominating in terms of abundance and fish species in biomass. The integration of eDNA analysis provided broader species detection, including cryptic and pelagic species, while acoustic techniques enabled large-scale resource assessment. However, discrepancies between methods highlighted the need for methodological refinement. Dominant species exhibited seasonal variation, with Portunus trituberculatus prevailing in spring (April), Trachurus japonicus and Scomber japonicus in summer (July–August), and Pampus argenteus in late autumn (November). A comparative analysis revealed that eDNA is sensitive to pelagic and cryptic species, trawl surveys effectively detect demersal fish, and acoustics allow for broad-scale biomass estimation, highlighting the complementary value of method integration. Full article

Dongshan Bay is a typical subtropical semi-enclosed bay characterized by abundant fish resources. We aimed to assess fish diversity and its seasonal variation in Dongshan Bay and to provide a scientific basis for the sustainable management and conservation of the fishery’s resources. In this study, we employed environmental DNA (eDNA) metabarcoding technology to analyze fish diversity in the bay during winter 2023 and summer 2024. A total of 76 fish species were detected across 12 sampling sites, with 43 species identified in summer and 45 species seen in winter. Overall, 13 species were detected in both the winter and summer. Non-significant differences were observed in Alpha diversity among the sampling sites. Fish species richness at the HXH2 site was the lowest among all the sampling sites for the reason that this sampling site was near to the effluent outlet of the Zhangzhou nuclear power plant and notably influenced by the thermal discharge. In general, fish diversity and abundance were higher in winter than in summer. RDA test analysis revealed that water temperature and dissolved oxygen were the primary environmental factors influencing fish distribution in summer. In winter, the influence of various factors is relatively balanced, with chlorophyll and Blue Green Algae Phycoerythrin (BGA PE) having a relatively greater impact than other factors. Our results offer valuable insights into enhancing fish diversity management in Dongshan Bay. Full article

As the largest lake in South China, Wanlv Lake is also an important drinking water source for Guangdong and Hong Kong and is responsible for water supplying of more than 40 million people in the Guangdong-Hong Kong-Macao Greater Bay Area. The study of fish diversity in Wanlv Lake can help us to effectively understand the changes and states of its aquatic ecosystem and provide scientific basis for natural ecological protection, biodiversity, sustainable use and scientific management of fishery resources. However, research on the lake’s fish is scarce. The high throughput environmental DNA metabarcoding technology (eDNA technology) of the mitochondrial 12S rRNA gene sequence was herein used to conduct a preliminary exploration of Wanlv Lake fish diversity. A total of 10 sampling sites were set up to monitor fish diversity and analyze the composition and richness of the species. The results revealed a total of 83 genera in 42 families and 17 orders of fish in the lake, with the highest proportion found in Cypriniformes (38 species), accounting for 45.24% of the total. Five alien species and eight rare and endangered species were also detected. The proportion of invasive species was 5.95%, and the combined proportion of rare and endangered species was 9.52%. The results indicated that Wanlv Lake serves as an important drinking water source, and overall, the condition of fish is satisfactory. However, proactive measures should be implemented to control the overpopulation of invasive species, as their unchecked proliferation may lead to a decline in species abundance, particularly among endangered species. This was the first overall assessment report on fish of the Wanlv Lake via 12S rRNA; the results herein lay a foundation for water quality assessment of Wanlv Lake as a drinking water source. Full article

Fenneropenaeus chinensis is an important economic species in the north of China, and plays an important role in both marine fishing and aquaculture. Long-term overfishing has led to the rapid decline of wild F. chinensis resources. The traditional trawl survey could not meet the demands of the F. chinensis resource survey. In this study, environmental DNA (eDNA) technology was used to evaluate the biomass of F. chinensis in the traditional Qinghai (Qingdao Haiyang) fishing ground in the southern sea area of the Shandong Peninsula, with the purpose of verifying whether eDNA technology can provide a new resource assessment method for fisheries resource species such as F. chinensis. The eDNA quantitative results of the Qingdao water samples ranged from 1972 copies/L to 6937 copies/L, with an average of 4366 ±1691 copies/L. Those in Haiyang water samples ranged from 4795 copies/L to 8715 copies/L, with an average of 6737 ± 1348 copies/L. The concentration of eDNA in shrimp culture ponds ranged from 1.14 × 10⁶ copies/L to 7.61 × 10⁶ copies/L, with an average of 3.33 × 10⁶ ± 2.28 × 10⁶ copies/L. The amount of eDNA released by each gram of F. chinensis per 24 h was about 2.91 × 10⁶ copies. According to this calculation, it was estimated that the distribution of F. chinensis was about one shrimp in every 300 m² sea area. Similarly, it is estimated that one shrimp is distributed every 240 m² in the Haiyang sea area. The result of this study confirms the feasibility of using eDNA to evaluate the biomass of shrimps. Full article

Surveys and assessments based on environmental DNA are not only efficient and time-saving, but also cause less harm to monitoring targets. Environmental DNA has become a common tool for the assessment and monitoring of aquatic organisms. In this study, we investigated fish resources in the Yangtze River mainstream using environmental DNA, and the variations in fish during two seasons (spring and autumn) were compared. The results showed that 13 species were identified in spring, and nine species of fish were identified in autumn. The fish with higher eDNA detection were Sinibotia superciliaris, Tachysurus fulvidraco, Cyprinus carpio, Ctenopharyngodon Idella, Monopterus albus, Acanthogobius hasta, Saurogobio dabryi, Oncorhynchus mykiss, Mugil cephalus, Odontamblyopus rubicundus. Seasonal variation between spring and autumn was not significant, and the environmental factors had different effects on fish assemblages during the two seasons. Our study used the eDNA technique to monitor the composition of fish in the spring and autumn in the Yangtze River mainstream, providing a new technology for the long-term management and protection of fishery resources in the region. Of course, problems such as pollution and insufficient databases are the current shortcomings of environmental DNA, which will be the focus of our future research and study. Full article