Search Results (39)

The objective of this study was to investigate the epidemiology of Fasciola hepatica in Cervus elaphus kept in natural conditions in the Riaño Regional Hunting Reserve, north-west of Spain, where several species of domestic and wild animals coexist. One hundred red deer were examined and classified according to age, sex, and sampling season. After the necropsy of the animals, the liver was removed and inspected to obtain the adult parasites of F. hepatica. Faecal samples were collected and processed using the coprological sedimentation technique. The prevalence of this trematode by necropsy was 12%, with a low number of specimens per animal ($\overline{\mathrm{x}}$ = 2.7 ± 1.5; range 1–6). The young animals and the males had a higher prevalence than the adults and the females, finding statistically significant differences only according to the host age. Significant variations were also observed when considering the seasons of the year, with the highest number of infected animals in spring. The histopathological study revealed the presence of lesions compatible with a chronic fasciolosis similar to that found in domestic animals. The shedding of F. hepatica eggs was quite low in terms of prevalence (6%) and mean intensity of infection ($\overline{\mathrm{x}}$ = 27.3 ± 20.6, range 4–60 epg), being in young animals, in males, and in spring, where the greatest excretion of eggs was observed. These results suggest that the deer are suitable definitive hosts for F. hepatica in the northwest of the Iberian Peninsula, but they are unusual hosts. The serum samples were analysed using a native excretory/secretory antigen (FhES) and a 2.9 kDa recombinant protein (FhrAPS) used for diagnosis of early and current fasciolosis in livestock. A commercial kit for serodiagnosis of F. hepatica in sheep and cattle, based on a monoclonal antibody (BIO K 211), was also evaluated in red deer. The seroprevalence of seropositivity of F. hepatica by FhES-ELISA was 32%, by FhrAPS-ELISA 13%, and by BIO K 211, 9%. In the three serological tests, the seroprevalence obtained was higher in adult animals, in males, and in spring. In the three serological tests used to understand the epidemiology of F. hepatica in red deer, we have observed that the sensitivity was low, perhaps due to the use of an anti-bovine IgG1 as a conjugate, so in future immunodiagnostic tests, it would be more desirable to obtain an anti-deer IgG, probably achieving better results. Due to these results, it is essential to investigate other serological or molecular tests that allow us to know the real importance of F. hepatica in deer and other wild animals. The role of deer as a reservoir of this trematode does not appear to be very important. Full article

To genetically characterise an epidemic isolate of feline panleukopenia virus (FPLV) harbouring the Ala91Ser mutation in China, a clinical strain (accession number: OR921195.1), named FPLV-CC19-02, was isolated from a PCR-positive faecal swab sample. Phylogenetic analysis revealed that it is far removed from all current commercial vaccine strains and differs from the FPLV prototype strain Cu-4 (M38246.1), specifically the vaccine strain of Fel-O-Vax^® PCT, at positions 91 (Ala91Ser) and 101 (Ile101Thr) within the VP2 protein. This virus can induce the typical cytopathic effect seen in parvovirus infection in feline kidney cells, resulting in severe clinical symptoms in cats, including haematochezia and hyperthermia. Furthermore, infected cats died of virus infection within 5–10 days post-infection (dpi) (100% morbidity and 83% mortality), indicating that FPLV-CC19-02 is a strain with increased virulence. Additionally, it demonstrated good immunogenicity in cats. Overall, these findings may help us to better understand the molecular prevalence of feline panleukopenia virus in cats and provide valuable basic data for the development of effective, locally adapted feline panleukopenia virus vaccines in China. Full article

The mechanical properties of faecal sludge (FS) influence its moisture retention characteristics to a greater extent than other properties. A comprehensive fundamental characterisation of the mechanical properties is scarcely discussed in the literature. This research focused on bulk and true densities, porosity, particle size distribution and zeta-potential, extracellular polymeric substances, rheology and dilatancy, microstructure analysis, and compactibility in the context of using the FS as a substitute for soil in land reclamation and bioremediation processes. FSs from different on-site sanitation systems were collected from around Durban, South Africa. The porosity of the FSs varied between 42% and 63%, with the zeta-potential being negative, below 10 mV. Over 95% of the particles were <1000 µm. With its presence in the inner part of the solid particles, tightly bound extra-cellular polymeric substances (TB-EPSs) influenced the stability of the sludge by tightly attaching to the cell walls, with the highest being in the septic tank with the greywater sample. More proteins than carbohydrates also confirmed characterised the anaerobic nature of the sludge. The results of the textural properties using a penetrometer showed that the initial slope of the positive part of the penetration curve was related to the stiffness of the sludge sample and similar to that of sewage sludge. The dynamic oscillatory measurements exhibited a firm gel-like behaviour with a linear viscoelastic behaviour of the sludges due to the change in EPSs because of anaerobicity. The high-TS samples exhibited the role of moisture as a lubricating agent on the motion of solid particles, leading to dilatancy with reduced moisture, where the yield stress was no longer associated with the viscous forces but with the frictional contacts of solid–solid particle interactions. The filtration–compression cell test showed good compactibility, but the presence of unbound moisture even at a high pressure of 300 kPa meant that not all unbound moisture was easily removable. The moisture retention behaviour of FS was influenced by its mechanical properties, and any interventional changes to these properties can result in the release of the bound moisture of FS. Full article

Waste water treatment plants (WWTP) are considered as a hotspot for the acquisition and dissemination of antimicrobial resistance (AMR). The present study aimed to assess the AMR rate of the waste water microbiome in a selected WWTP and the treatment efficiency. Culture-dependent and PCR methods were used in the AMR study of raw and treated waste water (TWW) microbiomes. The population proportion of heterotrophic plate count (HPC) bacteria resistant to five antibiotic classes was assessed, as well as the AMR phenotype of a total of 238 Enterobacteriaceae and 259 Enterococcus spp. strains. Waste water treatment increased tetracycline- and ciprofloxacin-resistant bacteria by 67% and 61%, as well as the incidence of Enterobacteriaceae resistant to ciprofloxacin, co-trimoxazole, and cephalosporins. Multiple resistance increased, and 8.8% of TWW isolates exhibited an ESBL-producing phenotype, most often encoded by blaTEM and blaCTX-M genes. The most common resistance among Enterococcus spp. was to erythromycin and tetracycline, and despite the increased AMR rate among TWW isolates, only the increase in tetracycline resistance and the decrease in high-level gentamicin resistance were significant. All parameters analysed demonstrated limited removal of resistant HPC or faecal indicator bacteria in the studied WWTP and a positive selective effect towards some of them, most often to ciprofloxacin. Full article

Background and Aims: Lynch syndrome (LS) carries a substantial lifetime risk of colorectal cancer which is currently mitigated by biennial colonoscopy surveillance. Paramount to the surveillance programme is the removal of adenomas before malignant transformation but there is an associated service burden and morbidity of repeated endoscopy. We investigated if faecal immunochemical testing (FIT) for faecal haemoglobin has the diagnostic performance to replace colonoscopy. Methods: In this retrospective cohort study, patients due to undergo planned surveillance for LS between November 2020 and April 2022 were sent two FIT kits prior to colonoscopy. Test diagnostic performance of colorectal cancer (CRC), advanced and non-advanced adenoma detection was calculated for single and double FIT strategies. A faecal-Hb of 10 µg Hb/g was considered positive. Results: In total, 78 patients, with 45 (57.7%) female, median age 52 years (IQR 41–63), completed at least one FIT and colonoscopy. The median time from FIT to colonoscopy was 47 days. A single FIT was positive in 7/30 cases of adenoma (2/3 advanced, 5/27 non-advanced). A total of 64 (82.1% of FIT1T returners) completed a second FIT. Using the greatest of the two FITs (FIT2TMAX) 8/26 (2/3 advanced, 4/23 non-advanced), patients with adenomas were identified. There were no cases of CRC. The sensitivity for adenoma detection was 23.3% and 23.1%, respectively. Conclusions: In patients with LS awaiting colonoscopy, FIT has a low sensitivity for detecting adenomas and advanced adenomas. This is not improved by the addition of a second FIT test. Full article

Keeving is the removal of nutrients from apple musts due to their binding to pectin, resulting in a slower fermentation and spontaneous arrest. The aim of this study was to determine the effect of keeving on the chemical composition of fermented apple must and on the volatile profile and sensory analysis of apple brandies. We compared the application of keeving during spontaneous fermentation with fermentation carried out by Saccharomyces cerevisiae (SafSpirit HG-1). We evaluated the impact of adding different doses of calcium chloride on various parameters of fermented musts and distillates. Calcium chloride had a greater effect on the ethanol concentration, total extract, and fermentation efficiency than on the type of fermentation used. However, a different phenomenon was observed with respect to the volatiles. The concentration of most of the higher alcohols, acetaldehyde, dodecanal, and geranylaceton, decreased after spontaneous fermentation and increased during the fermentation carried out with Saccharomyces cerevisiae SafSpirit HG-1. In general, the application of keeving contributed to a decrease in the concentration of ethyl and methyl esters, but caused an increase in the concentration of all acetate esters and terpenoids. When the amount of nutrients in the environment is limited and starvation occurs, microorganisms use the available nutrients for basic metabolic processes that allow them to survive and limit the formation of side metabolites such as volatiles. However, most of the samples fermented after the faecal depletion achieved high scores for the floral, fruity, and “overall note” parameters in the sensory analysis. This means that this method, carried out with a properly selected yeast strain, could be feasible for the distilling industry. Full article

A key functionality for cleansing wipes is their efficiency in removing dirt and microbial contamination from the skin to safe or non-detectable levels, traditionally determined using the gravimetric method, which has been reported to be prone to experimental errors. This study evaluates the efficiency of a water-based cleansing wipe, WaterWipes^® (WaterWipes, UC, Drogheda, Ireland), for removing synthetic faecal matter (Feclone^TM, SiliClone Creations LLC, Havertown, PA, United States) and Escherichia coli (NCTC 10538) from volunteers’ skin, the former using a dermal analytical device called the Antera 3D^TM camera (Miravex Ltd., Dublin, Ireland), and the latter using standard microbiological methods. Feclone^TM was applied to participants’ forearms and the Antera 3D^TM camera captured detailed images of the skin surface before and after wiping. The Antera 3D^TM camera approach was found to be effective in measuring cleaning efficiency, with the wipe removing all detectable traces of the Feclone^TM applied. The total pore area (mm²), pore count, and total pore volume (mm³) in test participants post-wiping were observed to be reduced on average by 39.05%, 34.39%, and 39.98%, respectively. The wipe removed 99.99% of E. coli (NCTC 10538) applied, as measured using the microbial plate count method. In conclusion, the Antera 3D^TM camera method was observed to be effective in evaluating removal of topically applied Feclone^TM. Full article

Hepatitis A virus (HAV) is an enteric virus mainly transmitted by the faecal–oral route. Belonging to the Picornaviridae family, HAV was first described as small naked particles, like all viruses of this family. However, for about a decade, it was demonstrated that HAV particles can exist surrounded by a lipid bilayer. This type of particle, called enveloped HAV (eHAV), acquires its lipid bilayer by hijacking a part of cell membranes during the virion egress in the last steps of the viral cycle. In vitro culture systems produce mainly eHAV, and so, to date, most of the studies on HAV have been carried out using this type of viral particle. In this study, a method based on lipid bilayer removal by chemical delipidation is proposed for the production of naked HAV particles. The resulting naked HAV particles conserve their infectivity and are therefore fully cultivable in vitro. By using this method, naked HAV particles can easily be produced in vitro and can be useful to perform further studies such as inactivation processes for the food industry, as HAV is a main concern for food safety. Full article

This longitudinal case study provides an in-detail report of the process towards the elimination of Mycobacterium avium subsp. paratuberculosis (MAP) from a closed 450-head commercial dairy herd. In parallel, two diagnostic approaches were applied to all cows in annual intervals during 2012–2022: detection of MAP in individual faecal samples by bacteriological cultivation on solid medium and detection of MAP-specific antibodies by ELISA. For each annual sampling, the kappa coefficients for test agreement and the survival rates of MAP-positive and MAP-negative cows were calculated. Applying a multivariable linear regression model revealed a significantly lower fat-corrected 305-day milk yield for MAP-positive cows. The true prevalence of MAP shedders reduced from 24.2% in 2012 to 0.4% in 2019 and during 2020–2022, no MAP shedder was identified. Test agreement was generally low and bacteriological cultivation showed positive results earlier than the ELISA. In the first years of control, the survival of MAP shedders was longer than in the final stage. In conclusion, the elimination of MAP from a dairy herd might be feasible within a decade. Changes in the test agreement must be considered. Timely removal of MAP shedders, hygienic calf rearing, and colostrum supply are key for successful control. Full article

The use of faecal sludge (FS) in anaerobic digestion (AD) requires a perfect knowledge of their composition. Considered as a very heterogeneous material, the high variability of FS can disturb biodigesters’ functionality and impact biogas production. Unique in West Africa, Kossodo’s biogas plant in Ouagadougou receives sludge from septic tanks and pit latrines. To evaluate the quality of sludge discharged in this treatment plant and its ability for AD, a characterization of 130 FS trucks from several onsite sanitation facilities was carried out. Physico-chemicals, including heavy metals and microbiological parameters, were analyzed using standard protocols. A biochemical methane potential test was employed to evaluate biogas yield. Results showed that raw sludge averaged 1.12% total solids (TS), 54.74% volatile solids (VS), 9253 mg/L chemical oxygen demand (COD), and 1645 mg/L biochemical oxygen demand (BOD). Settled faecal sludge exhibited higher levels of total coliforms, E. coli, helminth eggs, and heavy metals. Heavy metal levels met AD standards defined by VDI 4630, with decreasing toxicity order: Zn > Mn > Cu > Cr > Ni > Pb > As ≥ Hg. The carbon-to-nitrogen (C/N) ratio was 6.7 ± 4.3, indicating unsuitability for AD. Sludge settling increased C/N ratio by 46%, which was still below optimal AD conditions (20–30). Methane yield of raw and settled FS averaged 61 ± 0.2 and 156 ± 3.2 NL CH₄/kg VS removed, respectively. Co-substrate addition could enhance the methanogenic yield of these sludges. This study provides a valuable database on the characteristics of FS, supporting sustainable recovery options. Full article

Ewes undergo complex metabolic changes during pregnancy. Understanding the specific process of these changes is a necessary prerequisite in ewes for regulating and intervening in order to maintain pregnancies. However, there have been relatively few studies on the specific changes that occur in nutritional metabolism in pregnant ewes during early gestation, especially for some landrace ewes in highly cold areas. Therefore, this study aimed to (1) elucidate the changes in metabolites and microbial communities in pregnant ewes during early gestation using metabolomics and 16S ribosomal RNA gene (rDNA) amplicon sequencing approaches, and to (2) discover novel early pregnancy-induced biomarkers in the blood and faeces. Rams were placed together with ewes on D0 and removed on D45. During early gestation, blood and faecal samples were collected from ewes in a highly cold area for analysing the metabolites and microbial communities; these were retrospectively classified as the early gestation pregnant (EP) ewe group or the nonpregnant (NP) ewe group based on the lambing status recorded during the expected delivery period. The differences in the plasma biochemical parameters, plasma metabolites, and faecal microbial communities of pregnant and nonpregnant ewes were characterised. The GC, IL-6, O-acetyl-l-serine, L-glutamine, and 6-acetamido-2-oxohexanoic acid were screened out as potential biomarkers for evaluating the occurrence of early pregnancy. These novel early pregnancy-induced metabolites discovered in ewes might allow for the development of technologies to detect early pregnancies in sheep in highly cold areas. Full article

Rapid water-quality monitoring methods for beach water and sand can be helpful for public health authorities to develop comprehensive beach monitoring programs. In this study, we evaluated the performance of the Enterococcus qPCR (USEPA 1609.1) method for quality monitoring of beach water and sand-porewater at two Niagara region beaches in Ontario, Canada (Lakeside and Sunset Beaches). While the USEPA 1609.1 method has been validated for beach water, its potential for assessing associated beach sands (which may function as a microbial reservoir) has not been fully explored. All beach water samples (n = 168) passed the qPCR quality control (QC). However, only 20 out of 48 (41.7%) sand-porewater samples passed the qPCR QC, potentially due to interference by soluble inhibitors. The proportion of the sand-porewater samples passing QC improved slightly to 63 out of 120 (52.5%) with a prefiltration step to remove sand and other large particles. The faecal indicator density in the sand-porewater, tested in parallel, did not correlate with the beach water faecal indicator density. Comparing beach water data for the same-day Enterococcus qPCR threshold with the previous-day E. coli culturing-based threshold across all beach days tested, Enterococcus qPCR analyses identified 3 (7%) and 7 (16%) false positive/lost beach days for Lakeside and Sunset Beaches, respectively. Additionally, of the total beach days tested, Enterococcus qPCR analyses identified 2 (5%) and 1 (2%) false negative/health-risk days for Lakeside and Sunset Beaches, respectively. Sand-porewater testing analyses identified days when faecal indicators (in the sand) exceeded beach water quality thresholds. Compared with conventional E. coli culturing, use of the same-day qPCR method would result in fewer beach postings and could identify several additional health-risk days (when the beaches may not be posted). Future studies could include additional prefiltration steps or modifications in the Enterococcus qPCR protocol to improve the method’s applicability for sand quality monitoring. Full article

Parasites are generally overdispersed among their hosts, with far-reaching implications for their population dynamics and control. The factors determining parasite overdispersion have long been debated. In particular, stochastic parasite acquisition and individual host variation in density-dependent regulation through acquired host immunity have been identified as key factors, but their relative roles and possible interactions have seen little empirical exploration in parasite populations. Here, Taylor’s power law is applied to test the hypothesis that periodic parasite removal destabilises the host-parasite relationship and increases variance in parasite burden around the mean. The slope of the power relationship was compared by analysis of covariance among 325 nematode populations in wild and domestic ruminants, exploiting that domestic ruminants are often routinely treated against parasite infections. In Haemonchus spp. and Trichostrongylus axei in domestic livestock, the slope increased with the frequency of anthelmintic treatment, supporting this hypothesis. In Nematodirus spp., against which acquired immunity is known to be strong, the slope was significantly greater in post-mortem worm burden data than in faecal egg counts, while this relationship did not hold for the less immunogenic genus Marshallagia. Considered together, these findings suggest that immunity acting through an exposure-dependent reduction in parasite fecundity stabilises variance in faecal egg counts, reducing overdispersion, and that periodic anthelmintic treatment interferes with this process and increases overdispersion. The results have implications for the diagnosis and control of parasitic infections in domestic animals, which are complicated by overdispersion, and for our understanding of parasite distribution in free-living wildlife. Parasite-host systems, in which treatment and immunity effectively mimic metapopulation processes of patch extinction and density dependence, could also yield general insights into the spatio-temporal stability of animal distributions. Full article

Full-scale pyrolysis of faecal sludge in developing nations is an emerging technology for the complete removal of pathogens and the concurrent creation of biochar, a soil amendment shown to enhance crop productivity. Currently there is little information on the effects of faecal sludge biochar on soil and crop yield. Faecal sludge biochar was applied to an acidic, sandy soil to assess its effects on plant growth and yield in Micro-Tom, a model cultivar of tomato (Solanum lycopersicum L.). We examined four soil application treatments: a control soil, fertilizer treatment, biochar treatment, and a combined biochar and fertilizer treatment. The combined treatment of biochar and fertilizer together produced a tomato yield 2980% greater than the tomato yield from control soil, whereas biochar on its own increased the yield by 1060%. There was no significant difference in plant height between the combined biochar and fertilizer application and biochar on its own; however, both treatments significantly increased plant height compared to control soil. Below ground biomass showed a similar pattern, with no significant difference between biochar alone and combined biochar and fertilizer treatments, and both treatments resulted in significantly increased below ground biomass compared to control soil. The combined biochar and fertilizer treatment resulted in significantly lower water runoff than all other treatments. These findings have great potential implications for increasing food security and the creation of more sustainable agricultural practices, especially in developing regions. Full article

Full-scale pyrolysis of faecal sludge is a credible technology for the safe removal of pathogens and the concurrent creation of biochar, which has been shown to enhance crop productivity. Faecal sludge biochar has the potential to improve acidic, low nutrient soils and crop yield in developing nations more at risk of climate change and food insecurity. Little research has been conducted into public acceptance of faecal sludge biochar as a soil enhancer in agriculture. In this study of the public in Swansea, Wales, an online survey examines their awareness of, and comfort levels of eating food grown using biosolids, wood biochar and faecal sludge biochar. Our findings show that males were almost twice as likely than females to have a positive perception of biosolids (OR 1.91, p value 0.004) and faecal sludge biochar (OR 2.02, p value 0.03). Those in the oldest age group (65+) were almost five times more likely to have a positive view of faecal sludge biochar than the youngest age group (OR 4.88, p value 0.001). Deployment of faecal sludge biochar must overcome a “disgust effect” related to its human faecal origins. This factor must be centrally taken into account when implementing management and policy decisions regarding the land application of biosolids and faecal sludge biochar. Full article