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Search Results (343)

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2 pages, 1085 KB  
Correction
Correction: Chen et al. VdPT1 Encoding a Neutral Trehalase of Verticillium dahliae Is Required for Growth and Virulence of the Pathogen. Int. J. Mol. Sci. 2024, 25, 294
by Lihua Chen, Xiaohu Ma, Tiange Sun, Qian-Hao Zhu, Hongjie Feng, Yongtai Li, Feng Liu, Xinyu Zhang, Jie Sun and Yanjun Li
Int. J. Mol. Sci. 2026, 27(11), 5110; https://doi.org/10.3390/ijms27115110 - 5 Jun 2026
Viewed by 123
Abstract
In the original publication [...] Full article
(This article belongs to the Section Molecular Plant Sciences)
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26 pages, 410 KB  
Article
A Pilot Feasibility Study of a Group-Based Program Addressing Fear of Falling and Its Consequences on Activity Levels Among Older Adults Living in Low-Income Housing
by Roxane De Broux Leduc, Nathalie Bier, Jacqueline Rousseau, Samuel Turcotte, Dahlia Kairy, Thien Thanh Dang-Vu, Kami Sarimanukoglu, François Dubé, Elwige Angèle Ngapa and Johanne Filiatrault
J. Ageing Longev. 2026, 6(2), 45; https://doi.org/10.3390/jal6020045 - 4 Jun 2026
Viewed by 178
Abstract
Falls among older adults are a major public health concern. Older adults living in low-income housing (LIH) are at higher risk of falls due to disadvantages linked to social determinants of health, yet remain underrepresented in research. This study aimed to assess the [...] Read more.
Falls among older adults are a major public health concern. Older adults living in low-income housing (LIH) are at higher risk of falls due to disadvantages linked to social determinants of health, yet remain underrepresented in research. This study aimed to assess the feasibility of a program addressing fear of falling and its consequences on activity levels among older adults living in LIH in Côte-des-Neiges (Montreal, QC, Canada). A mixed-methods pilot feasibility study was conducted using Bowen et al.’s framework, drawing on data collected through questionnaires, observation grids, attendance records, and semi-structured interviews. The program consisted of six 90 min sessions designed to enhance participants’ confidence in preventing falls while promoting engagement in activities. Fourteen older adults (mean age = 75.5 years) were recruited. Outcome data on fall-related psychological factors, activity engagement, and knowledge about falls were collected before and after the program. Moreover, older participants’ perceived benefits were assessed following program completion. Post-program interviews with older adults, facilitators, and a community field worker were conducted to further explore program feasibility, including its acceptability, implementation, and integration. The program showed strong acceptability and a high attendance rate (95%). Although no statistically significant pre-post changes were observed in the outcome variables, older participants reported several benefits at post-test, including improved knowledge about fall prevention (100%) and greater confidence in their ability to avoid falls (85%). These findings support the feasibility of implementing this culturally adapted fall prevention program in similar LIH settings and provide valuable insights for its refinement and future research. Further investigation is warranted to examine the program’s feasibility across other LIH settings and linguistic groups, as well as to assess its effectiveness. Full article
11 pages, 2140 KB  
Article
Inhibitory Effects and Mode of Action of Pure Eugenol Versus Clove Essential Oil on Key Phytopathogenic Fungi
by Francisca Sempere-Ferre, Josefa Roselló and María Pilar Santamarina
Int. J. Mol. Sci. 2026, 27(11), 5083; https://doi.org/10.3390/ijms27115083 - 4 Jun 2026
Viewed by 108
Abstract
The use of natural products as alternatives to synthetic fungicides has gained increasing importance in crop protection. Among these, clove (Syzygium aromaticum) and its active compound, eugenol, are well known for their antifungal properties. However, it remains unclear whether the antifungal [...] Read more.
The use of natural products as alternatives to synthetic fungicides has gained increasing importance in crop protection. Among these, clove (Syzygium aromaticum) and its active compound, eugenol, are well known for their antifungal properties. However, it remains unclear whether the antifungal activity of clove is primarily driven by its major constituent, eugenol, or whether the whole essential oil exhibits greater or synergistic efficacy. Addressing this question is crucial for optimizing their application as biofungicidal agents; The chemical composition of clove essential oil was characterized using gas chromatography–flame ionization detection (GC-FID) and gas chromatography–mass spectrometry(GC-MS). The antifungal activity of the essential oil and pure eugenol (300 µg/mL) was evaluated in vitro against Botryotinia fuckeliana, Rhizoctonia solani, and Verticillium dahliae on potato dextrose agar (PDA). Mycelial growth inhibition was quantified, and data were analyzed using two-way analysis of variance (ANOVA) followed by Tukey’s honestly significant difference (HSD) test (α = 0.05); Eugenol exhibited higher antifungal activity than the essential oil across all tested species. V. dahliae was completely inhibited (100%) by eugenol, while the essential oil showed lower efficacy. Despite the high eugenol content (87.3%) in the oil, its reduced activity suggests that minor constituents may modulate overall antifungal performance. These findings demonstrate that eugenol is more effective than clove essential oil as an antifungal agent. This highlights that the biological activity of clove is largely driven by its major active component, providing key insights for the development of more efficient biofungicidal strategies. Full article
(This article belongs to the Special Issue Antifungal Potential of Botanical Compounds)
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18 pages, 3087 KB  
Article
Whole-Genome Identification of the Kunitz Trypsin Inhibitor (CaKTI) Gene Family in Capsicum annuum and Its Response to Verticillium dahliae Infection
by Ying Wang, Liner Zhuo, Jinyi Wu, Xiaotong Wang, Hengfei Lv, Xinmin Huang and Qinqin He
Int. J. Plant Biol. 2026, 17(6), 42; https://doi.org/10.3390/ijpb17060042 - 28 May 2026
Viewed by 141
Abstract
Verticillium wilt caused by Verticillium dahliae poses a severe threat to pepper (Capsicum annuum) production worldwide. Kunitz trypsin inhibitors (KTIs) play crucial roles in plant disease resistance, yet research on the CaKTI gene family in pepper, especially regarding its regulatory functions [...] Read more.
Verticillium wilt caused by Verticillium dahliae poses a severe threat to pepper (Capsicum annuum) production worldwide. Kunitz trypsin inhibitors (KTIs) play crucial roles in plant disease resistance, yet research on the CaKTI gene family in pepper, especially regarding its regulatory functions in resistance to V. dahliae, remains limited. In this study, members of the CaKTI gene family were systematically identified in the pepper genome, followed by comprehensive analyses of their physicochemical properties, phylogeny, chromosomal localization, conserved motifs, cis-acting elements in promoters, and expression profiles. A total of 22 CaKTI genes were identified, all harboring the beta-trefoil_STI superfamily domain. They were unevenly distributed across four chromosomes, with evident tandem duplication events, and exhibited tissue-specific and developmental stage-specific expression patterns. In the Verticillium-resistant pepper cultivar, five candidate CaKTI genes (CaKTI9, CaKTI6, CaKTI17, CaKTI18, and CaKTI22) were significantly induced and upregulated, particularly in roots, and their expression might be modulated by the methyl jasmonate signaling pathway. This study reveals the molecular features, evolutionary conservation, and defense-associated expression patterns of CaKTI genes in pepper and provides a preliminary exploratory basis for future research on disease resistance and molecular breeding. Full article
(This article belongs to the Section Plant Biochemistry and Genetics)
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20 pages, 3196 KB  
Article
Simplified Procedure for Isolation and Culture of Neuronal Cells from Brains of Sickle Cell Mice
by Yugal Goel, Mya A. Arellano, Kendall O’Daniel, Donovan A. Argueta, Reina Lomeli, Naomi Lomeli, Dahlia A. Ordaz, Daniela A. Bota, Vidhya Kumaresan and Kalpna Gupta
Cells 2026, 15(11), 976; https://doi.org/10.3390/cells15110976 - 26 May 2026
Viewed by 328
Abstract
Primary neuronal cultures from the brain are critical for investigating disease-specific cellular and molecular mechanisms in mouse models. Current methods for obtaining primary cultures require embryonic brains that are affected by embryonic lethality and genotypic characterization in severe disease models such as sickle [...] Read more.
Primary neuronal cultures from the brain are critical for investigating disease-specific cellular and molecular mechanisms in mouse models. Current methods for obtaining primary cultures require embryonic brains that are affected by embryonic lethality and genotypic characterization in severe disease models such as sickle cell disease (SCD). Furthermore, these neuronal cultures require about 14 days in vitro (DIVs) for neurite outgrowth to mature. We adapted and optimized a relatively simplified and reproducible method using brains from postnatal day 1 mouse pups for isolating and culturing hippocampal and cortical neurons. This approach produces viable neurons that attach, extend neurites, and express key synaptic markers by 7 DIV and also minimizes glial outgrowth. We successfully applied this approach to isolating and culturing hippocampal and cortical neurons from the brains of one-day-old (P1) pups of humanized transgenic homozygous BERK sickle cell and control mice. Morphological observations at 3, 7, and 14 DIVs demonstrated robust neuronal attachment, neurite outgrowth, and overall structural development in both male and female hippocampal and cortical neurons. Neurons in culture expressed key markers including neuronal nuclear protein (NeuN/Rbfox3), neurofilament 200 (NF200), microtubule-associated protein 2 (MAP2), vesicular glutamate transporter 1 (VGLUT1), postsynaptic density protein 95 (PSD 95), and glutamate N-methyl-D-aspartate receptor subunit 2B (GluN2B). Notably, male SCD hippocampal neurons evinced a higher density of PSD 95 puncta on dendritic spines compared to controls on 7 as well as 14 DIVs. Incubation of male hippocampal neurons in a sickle cell-like microenvironment with TNF-α and heme further increased the density of PSD 95 puncta and colocalization of GluN2B with PSD 95, supporting the utility of this culture system for examining disease-relevant structural and molecular responses. This optimized culture system provides a simplified and reproducible platform to investigate the mechanisms involving neuronal dysfunction in challenging mouse models of brain disorders. Full article
(This article belongs to the Special Issue Molecular Therapeutic Advances for Neurodegenerative Diseases)
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20 pages, 15979 KB  
Article
Functional Analysis of GhEXLB2 in Regulating Cotton Resistance to Verticillium Wilt
by Xuechi Li, Madad Allah, Xuehan Zhu, Junwei Wang, Ran Zhong, Jianting Feng, Haohua Chen, Manhong Wang, Fei Wang, Shandang Shi and Hongbin Li
Plants 2026, 15(11), 1616; https://doi.org/10.3390/plants15111616 - 25 May 2026
Viewed by 255
Abstract
Verticillium wilt (VW), caused by the soil-borne fungus Verticillium dahliae, is a major disease that markedly compromises both the yield and fiber quality of cotton. In this study, we explored the function and underlying mechanism of the cotton expansin gene GhEXLB2 in [...] Read more.
Verticillium wilt (VW), caused by the soil-borne fungus Verticillium dahliae, is a major disease that markedly compromises both the yield and fiber quality of cotton. In this study, we explored the function and underlying mechanism of the cotton expansin gene GhEXLB2 in response to VW infection. Expression profiling revealed that members of the GhEXL family exhibit distinct patterns across tissues and under various biotic and abiotic stresses. Notably, GhEXLB2, which encodes an extracellular protein, showed the strongest induction following V. dahliae challenge. Ectopic expression of GhEXLB2 in Arabidopsis thaliana promoted root elongation and root hair formation, and was associated with improved resistance to the pathogen. In contrast, silencing GhEXLB2 in cotton via virus-induced gene silencing (VIGS) led to pronounced vascular browning, increased pathogen recovery, and a lower level of disease resistance. In addition, RNA-seq profiling of GhEXLB2-silenced (VIGS) cotton plants revealed that most differentially expressed genes were enriched in pathways related to phytohormone signaling and plant–pathogen interactions, with salicylic acid (SA) signaling and WRKY transcription factors emerging as central regulatory components. Analysis of the GhEXLB2 promoter further identified multiple cis-acting elements associated with stress and hormone responsiveness. When integrated with protein–protein interaction (PPI) prediction data, these results suggest that GhEXLB2 may be modulated by a network of transcription factors and signaling pathways. Collectively, the evidence supports a positive association between GhEXLB2 and VW resistance. This study provides a framework for understanding expansin functions in cotton defense against VW. Full article
(This article belongs to the Special Issue Omics in Plant Development and Stress Responses)
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18 pages, 6008 KB  
Article
The GhWRKY70-GhAOS1 Axis Integrates Jasmonate Pathway Signaling to Regulate Cotton Immunity Against Verticillium dahliae
by Huiting Weng, Chao Zhang, Suoxian Li, Huiming Guo, Hongmei Cheng, Wenfang Guo and Xiaofeng Su
Int. J. Mol. Sci. 2026, 27(11), 4713; https://doi.org/10.3390/ijms27114713 - 23 May 2026
Viewed by 222
Abstract
Verticillium wilt (VW), caused by the soil-borne phytopathogen Verticillium dahliae, is a devastating vascular disease that severely threatens global cotton production and causes substantial economic losses. Jasmonic acid (JA) signaling plays a crucial role in plant innate immunity; however, the molecular mechanisms [...] Read more.
Verticillium wilt (VW), caused by the soil-borne phytopathogen Verticillium dahliae, is a devastating vascular disease that severely threatens global cotton production and causes substantial economic losses. Jasmonic acid (JA) signaling plays a crucial role in plant innate immunity; however, the molecular mechanisms governing JA biosynthesis during cotton defense responses to V. dahliae infection remain largely elusive. In this study, we identified that GhAOS1 (allene oxide synthase 1), a key rate-limiting enzyme-encoding gene in the JA biosynthetic pathway, was rapidly and significantly induced by V. dahliae infection and exclusively localized in chloroplasts. Functional analysis in GhAOS1-silenced cotton and overexpressing Arabidopsis plants demonstrated that GhAOS1 positively regulates resistance to V. dahliae. Transcriptome analysis of GhAOS1-silenced cotton plants showed that DEGs are significantly enriched in phenylpropanoid biosynthesis, flavonoid biosynthesis, and α-linolenic acid metabolism pathways. Consistent with these findings, silencing GhAOS1 significantly reduced endogenous JA levels and suppressed the expression of defense-related genes and JA biosynthetic genes in cotton. Furthermore, we identified that the transcription factor GhWRKY70 directly binds to the W-box cis-acting element in the GhAOS1 promoter through Y1H, LUC, and EMSA, which activated GhAOS1 transcription. Silencing GhWRKY70 in cotton significantly enhanced plant susceptibility to V. dahliae and suppressed the expression of JA signaling pathway-related genes. Collectively, our results elucidate that GhWRKY70 positively regulates cotton resistance to VW by activating GhAOS1-mediated JA biosynthesis, revealing a novel GhWRKY70-GhAOS1 regulatory module that integrates JA signaling to coordinate cotton immune responses against V. dahliae. This study provides new insights into the molecular mechanism of JA-mediated defense and offers potential targets for molecular breeding of VW-resistant cotton. Full article
(This article belongs to the Special Issue Cotton Breeding and Genetics: Advances and Perspectives)
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17 pages, 2153 KB  
Article
A Conserved miR172-TOE1 Module Coordinates Immunity and Flowering to Confer Verticillium Wilt Resistance in Arabidopsis thaliana and Cotton
by Ze Yu, Le Xu, Wambui Doris Njoki, Xiaoxiao Hu, Ran Wei, Ruonan Du, Cong Sheng, Muhammad Saqib Bilal, Isashova Umida and Hongwei Zhao
Plants 2026, 15(10), 1567; https://doi.org/10.3390/plants15101567 - 21 May 2026
Viewed by 515
Abstract
Verticillium wilt, caused by Verticillium dahliae, is a devastating disease that severely threatens cotton production worldwide. The long-term survival of the pathogen in soil and the limited availability of resistant cultivars make effective control strategies challenging. Although the fungal cross-kingdom RNA VdsR-1 [...] Read more.
Verticillium wilt, caused by Verticillium dahliae, is a devastating disease that severely threatens cotton production worldwide. The long-term survival of the pathogen in soil and the limited availability of resistant cultivars make effective control strategies challenging. Although the fungal cross-kingdom RNA VdsR-1 has been reported to delay floral transition and prolong vegetative growth, the underlying plant regulatory mechanisms remain largely unclear. Here, we show that the transcription factor AtTOE1, a target of ath-miR172b-3p, displays altered expression in response to changes in ath-miR172b-3p levels during V. dahliae inoculation, coinciding with coordinated changes in plant immune-related and developmental responses. Increased AtTOE1 expression is correlated with enhanced disease resistance, reduced pathogen colonization, and delayed floral transition. Furthermore, our results indicate that the VdsR-1/AtSPL13A module is associated with modulation of AtTOE1 expression via ath-miR172b-3p, suggesting the involvement of a cross-kingdom RNA-related regulatory framework linking plant immunity and development. Notably, this regulatory relationship is also observed in cotton, indicating evolutionary conservation across plant species. Together, our findings highlight TOE1 as a potential integrator of defense and growth-related processes during pathogen challenge and provide insights that may inform strategies to improve resistance to V. dahliae in cotton and other crops. Full article
(This article belongs to the Section Plant Protection and Biotic Interactions)
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17 pages, 3309 KB  
Article
The Methyltransferase VdPRMT4 Regulates Verticillium dahliae via Regulation of Primary Metabolic Processes
by Yanqing Bi, Guoshuai Zhang, Xinyu Zhu, Yumei Su, W. G. Dilantha Fernando, Xiaofeng Su, Wenfang Guo and Yue Li
J. Fungi 2026, 12(5), 369; https://doi.org/10.3390/jof12050369 - 16 May 2026
Viewed by 630
Abstract
Cotton Verticillium wilt (VW), caused by the soil-borne fungus Verticillium dahliae (V. dahliae), is a devastating disease that poses a serious threat to sustainable cotton production worldwide. Protein methylation plays a critical role in fungal adaptation to the host environment and [...] Read more.
Cotton Verticillium wilt (VW), caused by the soil-borne fungus Verticillium dahliae (V. dahliae), is a devastating disease that poses a serious threat to sustainable cotton production worldwide. Protein methylation plays a critical role in fungal adaptation to the host environment and manipulation of plant immunity. Protein arginine methyltransferases (PRMTs) are key enzymes catalyzing arginine methylation, yet their functions in V. dahliae pathogenicity remain largely unexplored. In this study, we identified VdPRMT4 in V. dahliae through homology-based screening. qRT-PCR analysis revealed that VdPRMT4 transcript levels were significantly increased during the early stages of V. dahliae infection in cotton. HIGS assays showed that silencing VdPRMT4 markedly alleviated cotton VW symptoms and reduced fungal biomass in cotton plants. Gene knockout and complementation experiments demonstrated that deletion of VdPRMT4 did not affect hyphal growth but significantly impaired sporulation capacity and severely attenuated pathogenicity on cotton. Transcriptomic analysis further indicated that loss of VdPRMT4 profoundly affected the metabolic pathways of V. dahliae, including protein processing in the endoplasmic reticulum, purine metabolism, and glycerolipid metabolism. Collectively, this study provides the first evidence that VdPRMT4 plays a critical role in stress adaptation and pathogenicity of V. dahliae, offering new insights into fungal pathogenesis and identifying potential targets for VW control. Full article
(This article belongs to the Section Fungal Genomics, Genetics and Molecular Biology)
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24 pages, 5526 KB  
Article
Chemical Characterization and Antimicrobial Activity of Pyrolysis Liquids from Walnut Residue
by Ibrahim Koc, Erdal Ogun, Fatmagul Geven, Kerim Guney, Faruk Yildiz and Ozkan Kaya
Int. J. Mol. Sci. 2026, 27(9), 4011; https://doi.org/10.3390/ijms27094011 - 30 Apr 2026
Viewed by 338
Abstract
Pyrolysis liquid (PL) derived from biomass pyrolysis exhibits biopesticidal properties and represents a promising value-added product within the sustainable circular economy framework. However, knowledge about the antimicrobial potential of PLs produced from walnut residue at different pyrolysis temperatures remains limited. We investigated the [...] Read more.
Pyrolysis liquid (PL) derived from biomass pyrolysis exhibits biopesticidal properties and represents a promising value-added product within the sustainable circular economy framework. However, knowledge about the antimicrobial potential of PLs produced from walnut residue at different pyrolysis temperatures remains limited. We investigated the chemical composition and antimicrobial activity of PLs obtained from agricultural walnut residue (Juglans regia L.) against selected plant pathogenic bacteria and fungi. PLs were produced at four temperature ranges: 200–300 °C (W-1), 300–400 °C (W-2), 400–500 °C (W-3), and 500–600 °C (W-4). Chemical characterization was performed using Gas chromatography–mass spectrometry (GC-MS), High-performance liquid chromatography (HPLC), and Inductively coupled plasma optical emission spectrometry (ICP-OES), with determination of total phenolic and flavonoid contents. Pyrolysis temperature significantly influenced the chemical profile and bioactive compound content of the PLs, with W-4 showing the highest total phenolic and flavonoid levels. Heavy metal analysis indicated minimal contamination in all samples. Antibacterial activity was observed in stock solutions, whereas diluted applications showed limited effects. The W-4 fraction showed the strongest antibacterial activity and exhibited MIC values of 12.50 µL/mL against Clavibacter michiganensis subsp. michiganensis, Xanthomonas euvesicatoria, and Pseudomonas syringae pv. syringae, and 25.00 µL/mL against Erwinia amylovora. Antifungal activity differed markedly across temperature ranges, with W-3 and W-4 displaying superior activity against Fusarium oxysporum and Verticillium dahliae, achieving complete mycelial growth inhibition at 5%, compared to 10% for W-2 and 20% for W-1. Positive controls confirmed assay validity (ciprofloxacin for antibacterial assays and cycloheximide for antifungal assays), whereas negative controls showed no inhibitory effect. Overall, higher pyrolysis temperatures, particularly 400–600 °C, enhanced the antimicrobial potential of walnut residue-derived PLs, supporting their possible use as bio-based antifungal agents for sustainable crop protection. Full article
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20 pages, 1970 KB  
Article
Comparative Evaluation of Pesticidal Potential of Five Aromatic Plants, with Emphasis on the Fungicidal Activity of Lavandula dentata and Thymus vulgaris Extracts Against the Soil-Borne Tomato Pathogens Fusarium oxysporum f.sp. radicis-lycopersici and Verticillium dahliae
by Aikaterini Gropali, Ioannis Stavrakakis, Nikolaos Remmas, Shereen Basiouni, George Tsiamis, Asma Ben Salem, Salma Lasram, Mete Yilmaz, Mevlut Emekci, Fatma Acheuk, Awad A. Shehata, Wolfgang Eisenreich, Paraschos Melidis and Spyridon Ntougias
Microorganisms 2026, 14(5), 1001; https://doi.org/10.3390/microorganisms14051001 - 29 Apr 2026
Viewed by 548
Abstract
The transition toward a sustainable agri-food system, aligned with agricultural and environmental policy objectives, has increased interest in aromatic plants as non-synthetic pesticide alternatives. This study focused on evaluating the antifungal potential of five specific aromatic plant species, particularly Lavandula dentata, Origanum [...] Read more.
The transition toward a sustainable agri-food system, aligned with agricultural and environmental policy objectives, has increased interest in aromatic plants as non-synthetic pesticide alternatives. This study focused on evaluating the antifungal potential of five specific aromatic plant species, particularly Lavandula dentata, Origanum vulgare, Thymus vulgaris, Salvia officinalis and Rosmarinus officinalis, against the phytopathogenic soil-borne fungi Fusarium oxysporum f.sp. radicis-lycopersici and Verticillium dahliae. During screening, L. dentata and T. vulgaris extracts exhibited strong in vitro fungicidal activity. Bioactive compounds previously detected in both lavender and thyme were identified in their extracts using a triple quadrupole/linear ion trap mass spectrometer. Assessment of in vitro phytoprotective action of L. dentata extract in solid and liquid growth media demonstrated inhibitory effects against F. oxysporum f.sp. radicis-lycopersici at concentrations above 1% v/v, with inhibitory effects of L. dentata extract being observed at concentrations equal to or above 2% v/v. T. vulgaris extract inhibited V. dahliae growth on solid media at concentrations at 1% v/v or above, while inhibitory effects were observed in broth media containing 2% v/v thyme extract. Seed germination tests of both L. dentata and T. vulgaris revealed a concentration-dependent reduction in their germination index (GI) at concentrations equal or above 2% v/v, apart from the effect of lavender extract on cress, where inhibition occurred at dose application above 5% v/v. In planta experiments demonstrated the complete phytoprotective action of lavender extract against F. oxysporum f.sp. radicis-lycopersici, while a marginal improvement in plant survival was observed during application of T. vulgaris extract. Full article
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21 pages, 9784 KB  
Article
Leucine-Rich Repeat Extension 7 Gene Confers Cotton Resistance to Verticillium Wilt
by Xue Du, Yanfang Li, Wankui Gong, Zhen Wei, Qiankun Liu, Aiming Zhang, Yuting Ge, Yangyang Wei, Yuling Liu, Quanwei Lu, Xianghui Xiao, Pengtao Li, Juwu Gong and Renhai Peng
Int. J. Mol. Sci. 2026, 27(9), 3852; https://doi.org/10.3390/ijms27093852 - 26 Apr 2026
Viewed by 566
Abstract
Leucine-rich repeat extensins (LRXs) are essential regulators of plant development, cell wall integrity, and stress responses. However, genome-wide LRX studies in cotton are limited. Analysis of four Gossypium species identified 29, 28, 16, and 16 LRX genes in G. hirsutum, G [...] Read more.
Leucine-rich repeat extensins (LRXs) are essential regulators of plant development, cell wall integrity, and stress responses. However, genome-wide LRX studies in cotton are limited. Analysis of four Gossypium species identified 29, 28, 16, and 16 LRX genes in G. hirsutum, G. barbadense, G. arboreum, and G. raimondii, respectively. Phylogenetic analysis resolved these 89 genes into four subfamilies (I–IV). Structural annotation revealed that cotton LRX family members exhibit conserved domain architectures. This finding was corroborated by motif analysis, which revealed notable conservation in the motif compositions of most cotton LRX proteins, suggesting functional conservation across evolutionary lineages. Distinct spatiotemporal expression patterns were uncovered between G. hirsutum and G. barbadense. Prolonged exposure to extreme temperatures induced widespread down-regulation of most GhLRX genes, whereas genes in subgroup IV were significantly up-regulated under salt and drought stress conditions, respectively. Notably, GhLRX7 showed a more proactive responding profile to Verticillium wilt (VW) infection, which was therefore selected for functional validation employing virus-induced gene silencing in the cotton cultivars MBI9626 and CCRI36. Phenotypic analysis of silenced plants revealed exacerbated disease symptoms compared to wild-type controls, providing direct evidence implicating GhLRX7 as a key contributor to defense against VW. Full article
(This article belongs to the Section Molecular Plant Sciences)
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13 pages, 2172 KB  
Article
VD9136 Positively Modulates the Pathogenicity of Verticillium dahliae to Cotton
by Kailu Chen, Rui Tang, Qing Xu, Ziqi Li, Xuebin Wang, Shandang Shi, Fei Wang, Lingling Chen and Hongbin Li
Int. J. Mol. Sci. 2026, 27(8), 3558; https://doi.org/10.3390/ijms27083558 - 16 Apr 2026
Viewed by 490
Abstract
Histidine triad (HIT) family proteins contain a conserved histidine triad motif and play key roles in fungal metabolism and pathogenicity. This study focused on VD9136, a member of the HIT family in Verticillium dahliae, aiming to elucidate its biological function and [...] Read more.
Histidine triad (HIT) family proteins contain a conserved histidine triad motif and play key roles in fungal metabolism and pathogenicity. This study focused on VD9136, a member of the HIT family in Verticillium dahliae, aiming to elucidate its biological function and mechanism underlying its role in cotton pathogenesis. A systematic investigation of the VD9136 gene in V. dahliae was conducted using bioinformatics analysis, gene knockout, genetic complementation, and pathogenicity assays. The results showed that VD9136 protein consists of 136 amino acids and is a stable, neutral, and weakly hydrophilic protein that lacks transmembrane domains and signal peptides; it is localized to the extracellular space via a non-classical secretion pathway. Its secondary structure is predominantly composed of α-helices and random coils. Phylogenetic analysis revealed that VD9136 is closely related to VliHIT, a homologous protein from V. longisporum, the pathogen responsible for Verticillium wilt in rapeseed. The promoter region of VD9136 contains multiple cis-acting elements, including light-responsive, hormone-responsive, and stress-responsive elements, indicating that its transcription may be regulated by multiple signaling pathways. VD9136 was significantly upregulated during the early stage of cotton infection (6–24 h post-inoculation). Pathogenicity assays demonstrated that V. dahliae knockout mutants lacking VD9136 exhibited a significant reduction in virulence, as evidenced by a lower disease index, decreased fungal biomass within plant tissues, and attenuated vascular browning in cotton plants. The pathogenic phenotype was successfully restored in genetic complementation strains. This study identified VD9136 as a key regulatory factor in the pathogenic process of V. dahliae, and its loss of function reduces the pathogenicity of V. dahliae. The findings provide a theoretical basis for elucidating the pathogenic mechanism of cotton Verticillium wilt and for developing corresponding prevention and control strategies. Full article
(This article belongs to the Special Issue Cotton Breeding and Genetics: Advances and Perspectives)
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15 pages, 3964 KB  
Article
Assessment of the Immunohistochemical Expression of Vitamin D Receptor, β-Catenin, and Ki-67 in Urothelial Carcinoma: A Cross-Sectional Study from Egypt
by Marwa M. El-Mosely, Abdulkarim Hasan, Mohamed Tharwat, Ahmed Abdellatief, Reda Elhawary, Mahmoud Salem, Mostafa Fawzy, Dina Sakr, Salah-el-din Sayed O. Semary, Sabah Mohamed Sharaf, Heba Gamil, Ahmed Abdulwahab Bawahab, Dahlia Soleman A. Mirdad, Mohammed S. Abdelwahed and Mohamed Mahmoud Abdellah
Int. J. Transl. Med. 2026, 6(2), 14; https://doi.org/10.3390/ijtm6020014 - 30 Mar 2026
Viewed by 743
Abstract
Background: Conventional urothelial carcinoma (UC) requires accurate risk stratification, particularly differentiation between non-muscle-invasive (NMIBC) and muscle-invasive bladder cancer (MIBC) and between low- and high-grade tumors. This study evaluated immunohistochemical (IHC) expression of vitamin D receptor (VDR), β-catenin, and Ki-67 index in Egyptian patients [...] Read more.
Background: Conventional urothelial carcinoma (UC) requires accurate risk stratification, particularly differentiation between non-muscle-invasive (NMIBC) and muscle-invasive bladder cancer (MIBC) and between low- and high-grade tumors. This study evaluated immunohistochemical (IHC) expression of vitamin D receptor (VDR), β-catenin, and Ki-67 index in Egyptian patients with conventional UC. Methods: A cross-sectional study was conducted on 58 archived conventional UC cases diagnosed in 2023 at Al-Azhar University Hospitals. VDR positivity was defined as ≥10% cytoplasmic and/or nuclear tumor cell staining. Membranous β-catenin was considered preserved when >80% of tumor cell membranes were stained; otherwise, it was reduced. Nuclear β-catenin was considered positive when ≥5% of tumor nuclei were stained. Ki-67 was categorized as high using a ≥30% cutoff. Associations with grade, muscle invasion status, and lymphovascular invasion (LVI) were analyzed. Results: Mean age was 65.3 ± 9.3 years; 86.2% were males; 51.7% were MIBC. Compared with NMIBC, MIBC was significantly associated with high grade, non-papillary architecture, LVI, and high Ki-67. VDR positivity was detected in 82.7% of cases and showed no significant association with grade, muscle invasion, or LVI. Preserved membranous β-catenin was seen in 34.5% and was significantly associated with tumor grade but not with muscle invasion or LVI; nuclear β-catenin was absent. High Ki-67 (60.3%) was significantly associated with high grade and MIBC, with no association with age, sex, or LVI. Conclusions: In Egyptian conventional UC, Ki-67 was a significant marker for aggressive clinicopathologic features, while VDR lacked discriminatory associations and β-catenin findings were mainly grade-related. Full article
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Article
Genome-Wide Identification and Expression Analysis of the HCT Gene Family in Upland Cotton (Gossypium hirsutum L.) in Response to Verticillium wilt Infection
by Yujia Zhang, Gang Liu, Baojun Liu, Mengxue Zhang, Yang Hu, Shu Wang, Jidi Sun and Aixing Gu
Biology 2026, 15(7), 520; https://doi.org/10.3390/biology15070520 - 25 Mar 2026
Viewed by 621
Abstract
Cotton, a globally vital cash crop, is severely constrained by V. dahliae. Lignin, a core structural component of plant cell walls, plays a crucial role in physical defense, with its biosynthesis regulated by hydroxycinnamoyltransferase (HCT)—a key enzyme in the phenylpropanoid pathway. However, [...] Read more.
Cotton, a globally vital cash crop, is severely constrained by V. dahliae. Lignin, a core structural component of plant cell walls, plays a crucial role in physical defense, with its biosynthesis regulated by hydroxycinnamoyltransferase (HCT)—a key enzyme in the phenylpropanoid pathway. However, the HCT gene family in upland cotton (Gossypium hirsutum) and its role in resistance to V. dahliae remain poorly understood. In this study, we performed a genome-wide identification of the HCT gene family in G. hirsutum, identifying 74 GhHCT genes that were classified into five evolutionary subfamilies. Bioinformatics analysis revealed that GhHCT proteins exhibit conserved functional domains but diverse gene structures, with promoter regions enriched in hormone-responsive and stress-responsive cis-acting elements. Expression profiling revealed that multiple GhHCT genes were significantly induced in response to V. dahliae infection. Three genes, GhHCT2, GhHCT35, and GhHCT47, showed significantly higher expression levels in resistant cultivars than in susceptible cultivars during early infection stages, suggesting pivotal roles in defense. These three candidate genes, which contain MeJA/SA-responsive elements in their promoters, may enhance resistance by regulating lignin synthesis to strengthen the cell wall barrier. In summary, this study provides the first comprehensive characterization of the HCT gene family in upland cotton. It identifies key candidates for improving resistance to V. dahliae, offering valuable genetic resources for molecular breeding. Full article
(This article belongs to the Special Issue Advances in Plant Genomics and Genome Editing)
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