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21 pages, 1784 KiB  
Article
Toxic Threats from the Fern Pteridium aquilinum: A Multidisciplinary Case Study in Northern Spain
by L. María Sierra, Isabel Feito, Mª Lucía Rodríguez, Ana Velázquez, Alejandra Cué, Jaime San-Juan-Guardado, Marta Martín, Darío López, Alexis E. Peña, Elena Canga, Guillermo Ramos, Juan Majada, José Manuel Alvarez and Helena Fernández
Int. J. Mol. Sci. 2025, 26(15), 7157; https://doi.org/10.3390/ijms26157157 - 24 Jul 2025
Viewed by 236
Abstract
Pteridium aquilinum (bracken fern) poses a global threat to biodiversity and to the health of both animals and humans due to its toxic metabolites and aggressive ecological expansion. In northern Spain, particularly in regions of intensive livestock farming, these risks may be exacerbated, [...] Read more.
Pteridium aquilinum (bracken fern) poses a global threat to biodiversity and to the health of both animals and humans due to its toxic metabolites and aggressive ecological expansion. In northern Spain, particularly in regions of intensive livestock farming, these risks may be exacerbated, calling for urgent assessment and monitoring strategies. In this study, we implemented a multidisciplinary approach to evaluate the toxicological and ecological relevance of P. aquilinum through four key actions: (a) quantification of pterosins A and B in young fronds (croziers) using ultra-high-performance liquid chromatography coupled with tandem mass spectrometry (UHPLC-MS/MS); (b) analysis of in vivo genotoxicity of aqueous extracts using Drosophila melanogaster as a model organism; (c) a large-scale survey of local livestock farmers to assess awareness and perceived impact of bracken; and (d) the development and field application of a drone-based mapping tool to assess the spatial distribution of the species at the regional level. Our results confirm the consistent presence of pterosins A and B in croziers, with concentrations ranging from 0.17 to 2.20 mg/g dry weight for PtrB and 13.39 to 257 µg/g for PtrA. Both metabolite concentrations and genotoxicity levels were found to correlate with latitude and, importantly, with each other. All tested samples exhibited genotoxic activity, with notable differences among them. The farmer survey (n = 212) revealed that only 50% of respondents were aware of the toxic risks posed by bracken, indicating a need for targeted outreach. The drone-assisted mapping approach proved to be a promising tool for identifying bracken-dominated areas and provides a scalable foundation for future ecological monitoring and land management strategies. Altogether, our findings emphasize that P. aquilinum is not merely a local concern but a globally relevant toxic species whose monitoring and control demand coordinated scientific and policy-based efforts. Full article
(This article belongs to the Special Issue The Transcendental World of Plant Toxic Compounds)
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65 pages, 28754 KiB  
Article
A Palynological Atlas of the Amazon canga Vegetation
by Luiza de Araújo Romeiro, Edilson Freitas da Silva, Luiza Santos Reis, Léa Maria Medeiros Carreira, Tarcísio Magevski Rodrigues, Delmo Fonseca da Silva, Tereza Cristina Giannini, Markus Gastauer, Pedro Walfir Martins e Souza-Filho, Lourival Tyski and José Tasso Felix Guimarães
Plants 2025, 14(9), 1319; https://doi.org/10.3390/plants14091319 - 27 Apr 2025
Viewed by 644
Abstract
cangas are iron-rich outcrops where rupestrian fields develop in the Carajás Mountain Range (CMR). canga formations are ancient ecosystems characterized by high levels of endemic and threatened plant species that thrive on iron-rich substrates in the southeastern Amazon uplands. The recent taxonomic validation [...] Read more.
cangas are iron-rich outcrops where rupestrian fields develop in the Carajás Mountain Range (CMR). canga formations are ancient ecosystems characterized by high levels of endemic and threatened plant species that thrive on iron-rich substrates in the southeastern Amazon uplands. The recent taxonomic validation of these species enables more accurate distribution modeling across past, present, and future time scales. This work presents a comprehensive palynological database for the Amazon canga vegetation, resulting from extensive field and herbarium surveys, as well as the compilation and taxonomic validation of species in the Carajás Mountain Range (CMR). This atlas includes 204 plant species: 10 ferns and lycophytes, 62 monocots, and 132 eudicots and magnoliids (mainly herbs, lianas, and trees). Most flowering plants are pollinated by bees, with secondary pollination by other insects and wind. The taxa co-occur in two geoenvironments: (1) forested slopes and caves over plinthosols and ferralsols and (2) slopes with canga vegetation over plinthosols. Seventeen species are potential domesticates used by Indigenous peoples. This highlights canga vegetation as a unique and diverse ecosystem with various survival strategies, emphasizing the need for precise habitat definitions in paleoenvironmental and paleoclimate reconstructions. This atlas provides a valuable reference for palynological studies, enhancing the vegetation reconstruction, climate history analysis, pre-Columbian influences on vegetation patterns, and ecological monitoring. Full article
(This article belongs to the Special Issue Floral Biology, 4th Edition)
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22 pages, 4669 KiB  
Article
Evaluation of Sustainable Development Objectives in the Production of Protected Geographical Indication Legumes
by Betty Carlini, Javier Velázquez, Derya Gülçin, Cristina Lucini and Víctor Rincón
Land 2025, 14(3), 636; https://doi.org/10.3390/land14030636 - 18 Mar 2025
Viewed by 591
Abstract
The Mediterranean Diet is a highly sustainable diet, and legumes are among the products that best characterize this concept. This study evaluates the environmental sustainability of the Protected Geographical Indication (PGI) legume Phaseolus vulgaris L. cultivated in the Asturias region, Spain. Employing a [...] Read more.
The Mediterranean Diet is a highly sustainable diet, and legumes are among the products that best characterize this concept. This study evaluates the environmental sustainability of the Protected Geographical Indication (PGI) legume Phaseolus vulgaris L. cultivated in the Asturias region, Spain. Employing a multi-indicator approach, the study aims to define and measure certain biodiversity indicators useful for assessing the ecological quality and sustainability of the agroecosystems under consideration. Spatial analyses were conducted with GIS-based methodologies, integrating the Analytic Hierarchy Process (AHP) to generate a Sustainability Index (SI). The study found that a significant positive spatial autocorrelation was observed using Moran’s I test (Moran’s I = 0.74555, p < 0.01), indicating that the SI values were not equally distributed but clustered around particular regions. Furthermore, the Getis-Ord Gi* analysis determined statistically significant hotspots, mainly distributed in the western and southwestern areas, including regions near Cangas del Narcea and Tineo. This paper highlights the importance of integrating spatial analysis for environmental assessments to develop sustainability approaches. Soil quality, water use, biodiversity, and land management are some of the factors that affect sustainability outcomes in the region. The results underscore the role of PGI in promoting sustainable agricultural practices by meeting geographical and quality requirements for local production. Full article
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24 pages, 3754 KiB  
Article
Effectiveness of the SYNCHRONIZE + Brief Intervention in Improving Mediterranean Diet Adherence, Nutritional Quality and Intake Pattern in Persons with Fibromyalgia and Chronic Fatigue Syndrome
by Noèlia Carrasco-Querol, Lorena Cabricano-Canga, Nerea Bueno Hernández, Carme Martín-Borràs, Alessandra Queiroga Gonçalves, Anna Vila-Martí, Blanca Ribot, Judit Solà, Carme Valls-Llobet, Rosa Caballol Angelats, Pilar Montesó-Curto, Elisabet Castro Blanco, Macarena Pozo Ariza, Sandra Carreres Rey, Laura Pla Pagà, Mònica Dearos Sanchís, José Fernández-Sáez, M. Rosa Dalmau Llorca and Carina Aguilar Martín
Nutrients 2025, 17(1), 11; https://doi.org/10.3390/nu17010011 - 24 Dec 2024
Cited by 1 | Viewed by 2216
Abstract
Background: Multidisciplinary lifestyle interventions are being researched to treat fibromyalgia. However, the impact of nutrition as a key treatment component is little studied. This study aimed to evaluate the effectiveness of the SYNCHRONIZE + lifestyle multidisciplinary intervention in improving adherence to the Mediterranean [...] Read more.
Background: Multidisciplinary lifestyle interventions are being researched to treat fibromyalgia. However, the impact of nutrition as a key treatment component is little studied. This study aimed to evaluate the effectiveness of the SYNCHRONIZE + lifestyle multidisciplinary intervention in improving adherence to the Mediterranean diet, nutrition quality and dietary intake pattern in persons with fibromyalgia and chronic fatigue syndrome. Methods: A pragmatic randomized clinical trial was conducted in primary care. Data were collected using the 17-item energy-restricted Mediterranean Adherence Screener (er-MEDAS), the food frequency questionnaire (sFFQ) and the 24 h recall questionnaire (24 HR), in addition to chrono-nutritional, anthropometric, and body composition data, at baseline and 3-, 6-, and 12- month follow-up visits, and statistically analyzed. Results: A total of 158 participants were evaluated. Results showed the effectiveness of the intervention in improving adherence to the Mediterranean diet. The adherence depended on the group-time interaction being positive and significant at 3 and 6 months post-intervention in the INT group and on the participant age and educational level. Specifically, the intake of legumes, fruits, vegetables, nuts and blue fish was increased, while the intake of sweets and pastries, butter and cream and red and processed meat was reduced. Furthermore, the intake of chips and candies was also reduced, and the consumption of fermented food (yogurts, cheese, kefir) increased. Thus, general diet quality improved. Interestingly, the intake of key nutrients such as protein and iron increased. Furthermore, the number of night eaters was decreased significantly. Muscle mass index was also improved in the intervention group. These results were maintained in the medium to long term. Conclusion: SYNCHRONIZE + is a brief, low-cost, multidisciplinary intervention effective in improving adherence to the Mediterranean diet and improving nutritional and dietary intake patterns in persons with fibromyalgia and chronic fatigue syndrome. Further evaluation of the effect on quality of life and symptoms is needed. Full article
(This article belongs to the Section Nutrition Methodology & Assessment)
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13 pages, 2526 KiB  
Article
The Impact of Rhizospheric and Endophytic Bacteria on the Germination of Carajasia cangae: A Threatened Rubiaceae of the Amazon Cangas
by Daniela Boanares, Aline Figueiredo Cardoso, Diego Fernando Escobar Escobar, Keila Jamille Alves Costa, José Augusto Bitencourt, Paulo Henrique O. Costa, Silvio Ramos, Markus Gastauer and Cecilio Frois Caldeira
Microorganisms 2024, 12(9), 1843; https://doi.org/10.3390/microorganisms12091843 - 6 Sep 2024
Cited by 2 | Viewed by 1472
Abstract
Carajasia cangae (Rubiaceae) is a narrow endemic species from the canga ecosystems of the Carajás National Forest that is facing extinction due to a limited range and habitat disturbance from hydroclimatological changes and mining activities. This study examines the influence of rhizospheric and [...] Read more.
Carajasia cangae (Rubiaceae) is a narrow endemic species from the canga ecosystems of the Carajás National Forest that is facing extinction due to a limited range and habitat disturbance from hydroclimatological changes and mining activities. This study examines the influence of rhizospheric and endophytic bacteria on C. cangae seed germination to support conservation efforts. Soil samples, both rhizospheric and non-rhizospheric, as well as plant root tissues, were collected. Bacteria from these samples were subsequently isolated, cultured, and identified. DNA sequencing revealed the presence of 16 isolates (9 rhizospheric and 7 endophytic), representing 19 genera and 6 phyla: Proteobacteria, Actinobacteria, Acidobacteria, Firmicutes, Bacteroidetes, and Chloroflexi. The endophytic isolates of Bacillus and the rhizospheric isolates of Planococcus and Lysinibacillus reduced the median germination time and initiation time, while the rhizospheric isolates Serratia and Comamonas increased the germination time and decreased the germination percentage in comparison to the control sample. These findings emphasize the crucial role of endophytic bacteria in the germination of C. cangae and highlight isolates that could have beneficial effects in the following stages of plant growth. Understanding the impact of endophytic and rhizospheric bacterial isolates on seed germination can enhance conservation efforts by shortening the germination period of this species and thereby improving seedling production. Additionally, this knowledge will pave the way for future research on the role of bacteria in the establishment of C. cangae. Full article
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21 pages, 945 KiB  
Review
Nutrition and Chronobiology as Key Components of Multidisciplinary Therapeutic Interventions for Fibromyalgia and Associated Chronic Fatigue Syndrome: A Narrative and Critical Review
by Noèlia Carrasco-Querol, Lorena Cabricano-Canga, Nerea Bueno Hernández, Alessandra Queiroga Gonçalves, Rosa Caballol Angelats, Macarena Pozo Ariza, Carme Martín-Borràs, Pilar Montesó-Curto, Elisabet Castro Blanco, Maria Rosa Dalmau Llorca and Carina Aguilar Martín
Nutrients 2024, 16(2), 182; https://doi.org/10.3390/nu16020182 - 5 Jan 2024
Cited by 4 | Viewed by 8869
Abstract
Fibromyalgia (FM) is often accompanied by chronic fatigue syndrome (CFS). It is a poorly understood disorder that mainly affects women and leads to chronic pain, fatigue, and insomnia, among other symptoms, which decrease quality of life. Due to the inefficiency of current pharmacological [...] Read more.
Fibromyalgia (FM) is often accompanied by chronic fatigue syndrome (CFS). It is a poorly understood disorder that mainly affects women and leads to chronic pain, fatigue, and insomnia, among other symptoms, which decrease quality of life. Due to the inefficiency of current pharmacological treatments, increasing interest is being directed towards non-pharmacological multicomponent therapies. However, nutrition and chronobiology are often overlooked when developing multicomponent therapies. This narrative and critical review explore the relevance of nutritional and chronobiological strategies in the therapeutic management of FM and the often-associated CFS. Reviewed literature offers scientific evidence for the association of dietary habits, nutrient levels, body composition, gut microbiota imbalance, chronobiological alterations, and their interrelation with the development and severity of symptoms. This review highlights the key role of nutrition and chronobiology as relevant and indispensable components in a multidisciplinary approach to FM and CFS. Full article
(This article belongs to the Section Nutrition and Public Health)
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16 pages, 2166 KiB  
Article
Exogenous Nitric Oxide Alleviates Water Deficit and Increases the Seed Production of an Endemic Amazonian Canga Grass
by Daniela Boanares, Cristiane J. Da-Silva, Keila Jamille Alves Costa, Joana Patrícia Pantoja Serrão Filgueira, Marina Ludmila Oliveira Conor Salles, Luiz Palhares Neto, Markus Gastauer, Rafael Valadares, Priscila Sanjuan Medeiros, Silvio Junio Ramos and Cecilio Frois Caldeira
Int. J. Mol. Sci. 2023, 24(23), 16676; https://doi.org/10.3390/ijms242316676 - 23 Nov 2023
Viewed by 1736
Abstract
Open pit mining can cause loss in different ecosystems, including damage to habitats of rare and endemic species. Understanding the biology of these species is fundamental for their conservation, and to assist in decision-making. Sporobolus multiramosus is an annual grass endemic to the [...] Read more.
Open pit mining can cause loss in different ecosystems, including damage to habitats of rare and endemic species. Understanding the biology of these species is fundamental for their conservation, and to assist in decision-making. Sporobolus multiramosus is an annual grass endemic to the Amazon canga ecosystems, which comprise rocky outcrop vegetation covering one of the world’s largest iron ore reserves. Here, we evaluated whether nitric oxide aids S. multiramosus in coping with water shortages and examined the physiological processes behind these adaptations. nitric oxide application improved the water status, photosynthetic efficiency, biomass production, and seed production and germination of S. multiramosus under water deficit conditions. These enhancements were accompanied by adjustments in leaf and root anatomy, including changes in stomata density and size and root endodermis thickness and vascular cylinder diameter. Proteomic analysis revealed that nitric oxide promoted the activation of several proteins involved in the response to environmental stress and flower and fruit development. Overall, the results suggest that exogenous nitric oxide has the potential to enhance the growth and productivity of S. multiramosus. Enhancements in seed productivity have significant implications for conservation initiatives and can be applied to seed production areas, particularly for the restoration of native ecosystems. Full article
(This article belongs to the Special Issue Nitric Oxide Signalling in Plants)
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11 pages, 3259 KiB  
Article
Multi-Trait Single-Step Genomic Prediction for Milk Yield and Milk Components for Polish Holstein Population
by Hasan Önder, Beata Sitskowska, Burcu Kurnaz, Dariusz Piwczyński, Magdalena Kolenda, Uğur Şen, Cem Tırınk and Demet Çanga Boğa
Animals 2023, 13(19), 3070; https://doi.org/10.3390/ani13193070 - 29 Sep 2023
Cited by 2 | Viewed by 1949
Abstract
The objective of our study was to evaluate the predictive ability of a multi-trait genomic prediction model that accounts for interactions between marker effects to estimate heritability and genetic correlations of traits including 305-day milk yield, milk fat percentage, milk protein percentage, milk [...] Read more.
The objective of our study was to evaluate the predictive ability of a multi-trait genomic prediction model that accounts for interactions between marker effects to estimate heritability and genetic correlations of traits including 305-day milk yield, milk fat percentage, milk protein percentage, milk lactose percentage, and milk dry matter percentage in the Polish Holstein Friesian cow population. For this aim, 14,742 SNP genotype records for 586 Polish Holstein Friesian dairy cows from Poland were used. Single-Trait-ssGBLUP (ST) and Multi-Trait-ssGBLUP (MT) methods were used for estimation. We examined 305-day milk yield (MY, kg), milk fat percentage (MF, %), milk protein percentage (MP, %), milk lactose percentage (ML, %), and milk dry matter percentage (MDM, %). The results showed that the highest marker effect rank correlation was found between milk fat percentage and milk dry matter. The weakest marker effect rank correlation was found between ML and all other traits. Obtained accuracies of this study were between 0.770 and 0.882, and 0.773 and 0.876 for MT and ST, respectively, which were acceptable values. All estimated bias values were positive, which is proof of underestimation. The highest heritability value was obtained for MP (0.3029) and the lowest heritability value was calculated for ML (0.2171). Estimated heritability values were low for milk yield and milk composition as expected. The strongest genetic correlation was estimated between MDM and MF (0.4990) and the weakest genetic correlation was estimated between MY and ML (0.001). The genetic relations with milk yield were negative and can be ignored as they were not significant. In conclusion, multi-trait genomic prediction can be more beneficial than single-trait genomic prediction. Full article
(This article belongs to the Collection Advances in Cattle Breeding, Genetics and Genomics)
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17 pages, 6715 KiB  
Article
Pollen Morphology of Convolvulaceae from Southeastern Amazonian Cangas and Its Relevance for Interaction Networks and Paleoenvironmental Studies
by Luiza de Araújo Romeiro, Edilson Freitas da Silva, Liziane Vilela Vasconcelos, Karen da Silva Lopes, Léa Maria Medeiros Carreira and José Tasso Felix Guimarães
Plants 2023, 12(12), 2256; https://doi.org/10.3390/plants12122256 - 9 Jun 2023
Cited by 7 | Viewed by 3293
Abstract
Serra dos Carajás harbors a unique open plant community in Amazonia, known as canga vegetation, with several endemic species coexisting with the potential threat of large-scale iron ore mining. In this sense, Convolvulaceae occur in a wide variety of canga geoenvironments with multiple [...] Read more.
Serra dos Carajás harbors a unique open plant community in Amazonia, known as canga vegetation, with several endemic species coexisting with the potential threat of large-scale iron ore mining. In this sense, Convolvulaceae occur in a wide variety of canga geoenvironments with multiple flower visitors, but the scarcity of data on its pollen morphology prevents the correct association between Convolvulaceae species with floral visitors, as well as the precise identification of their habitats throughout the Quaternary. Therefore, this study aims to contribute to the taxonomic knowledge and refinement of the identification of insect-plant networks of endangered plants, including Ipomoea cavalcantei. Pollen grains were examined by light and scanning electron microscopy (LM and SEM, respectively), and the morphological parameters obtained were statistically analyzed using principal component analysis. Therefore, all species were differentiated based on aperture types and exine ornamentation. The set of morphological characters indicated that echinae morphology, easily identified under LM, was effective for the identification of Ipomoea species. This work represents the first robust pollen database for a precise identification at the species level of Convolvulaceae from southeastern Amazonian cangas. Full article
(This article belongs to the Special Issue Floral Biology 2.0)
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11 pages, 3519 KiB  
Article
Ellipsometry Characterisation for the Cd1-xZnxTe1-ySey Semiconductor Used in X-ray and Gamma Radiation Detectors
by Lidia Martínez Herraiz, Jose Luis Plaza Canga-argüelles and Alejandro Francisco Braña de Cal
Crystals 2023, 13(4), 693; https://doi.org/10.3390/cryst13040693 - 18 Apr 2023
Cited by 1 | Viewed by 1688
Abstract
The study of the optical properties of the Cd1-xZnxTe1-ySey (CZTS) crystal provides a clear idea about its response to incident X-ray or gamma radiation. This is important for selecting a proper composition of CZTS to achieve [...] Read more.
The study of the optical properties of the Cd1-xZnxTe1-ySey (CZTS) crystal provides a clear idea about its response to incident X-ray or gamma radiation. This is important for selecting a proper composition of CZTS to achieve superior quality and high-resolution X-ray and gamma radiation detectors at room temperature and reduce their production cost. This article’s novelty is in lowering the cost of the optical and compositional characterisation of CZTS using the ellipsometry technique. The most significant successes achieved are the composition ellipsometry model determination of CZTS based on the Effective Medium Approximation (EMA) substrate of the binary compound CdTe and ZnSe with an oxide layer of CdTe and the experimental verification that the bandgap moves to lower energies with the addition of Se. Full article
(This article belongs to the Topic Advanced Structural Crystals)
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23 pages, 5712 KiB  
Review
Landscape and Climate Changes in Southeastern Amazonia from Quaternary Records of Upland Lakes
by José Tasso Felix Guimarães, Prafulla Kumar Sahoo, Pedro Walfir Martins e Souza-Filho, Marcio Sousa da Silva, Tarcísio Magevski Rodrigues, Edilson Freitas da Silva, Luiza Santos Reis, Mariana Maha Jana Costa de Figueiredo, Karen da Silva Lopes, Aline Mamede Moraes, Alessandro Sabá Leite, Renato Oliveira da Silva Júnior, Gabriel Negreiros Salomão and Roberto Dall’Agnol
Atmosphere 2023, 14(4), 621; https://doi.org/10.3390/atmos14040621 - 24 Mar 2023
Cited by 8 | Viewed by 2850
Abstract
The upland lakes (ULs) in Carajás, southeastern Amazonia, have been extensively studied with respect to their high-resolution structural geology, geomorphology, stratigraphy, multielement and isotope geochemistry, palynology and limnology. These studies have generated large multiproxy datasets, which were integrated in this review to explain [...] Read more.
The upland lakes (ULs) in Carajás, southeastern Amazonia, have been extensively studied with respect to their high-resolution structural geology, geomorphology, stratigraphy, multielement and isotope geochemistry, palynology and limnology. These studies have generated large multiproxy datasets, which were integrated in this review to explain the formation and evolution of the ULs. These ULs evolved during the Pliocene–Pleistocene periods through several episodes of a subsidence of the lateritic crust (canga) promoted by fault reactivation. The resulting ULs were filled under wet/dry and warm/cool paleoclimatic conditions during the Pleistocene period. The multielement geochemical signature indicates that the detrital sediments of these ULs were predominantly derived from weathered canga and ferruginous soils, while the sedimentary organic matter came from autochthonous (siliceous sponge spicules, algae, macrophytes) and allochthonous (C3/C4 canga and forest plants and freshwater dissolved organic carbon) sources. Modern pollen rain suggests that even small ULs can record both the influence of canga vegetation and forest signals; thus, they can serve as reliable sites to provide a record of vegetation history. The integrated data from the sedimentary cores indicate that the active ULs have never dried up during the last 50 ka cal BP. However, subaerial exposure occurred in filled ULs, such as the Tarzan mountain range during the Last Glacial Maximum (LGM) and the Bocaína and S11 mountain ranges in the mid-Holocene period, due to the drier conditions. Considering the organic proxies, the expansion of C4 plants has been observed in the S11 and Tarzan ULs during dry events. Extensive precipitation of siderite in UL deposits during the LGM indicated drier paleoenvironmental conditions, interrupting the predominantly wet conditions. However, there is no evidence of widespread forest replacement by savanna in the Carajás plateau of southeastern Amazonia during the late Pleistocene and Holocene. Full article
(This article belongs to the Special Issue Paleoclimate Reconstruction)
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13 pages, 2419 KiB  
Article
Acquiring Iron-Reducing Enrichment Cultures: Environments, Methods and Quality Assessments
by Aline Figueiredo Cardoso, Rayara do Socorro Souza da Silva, Isabelle Gonçalves de Oliveira Prado, José Augusto Pires Bitencourt and Markus Gastauer
Microorganisms 2023, 11(2), 448; https://doi.org/10.3390/microorganisms11020448 - 10 Feb 2023
Cited by 5 | Viewed by 3183
Abstract
Lateritic duricrusts cover iron ore deposits and form spatially restricted, unique canga ecosystems endangered by mining. Iron cycling, i.e., the dissolution and subsequent precipitation of iron, is able to restitute canga duricrusts, generating new habitats for endangered biota in post-mining landscapes. As iron-reducing [...] Read more.
Lateritic duricrusts cover iron ore deposits and form spatially restricted, unique canga ecosystems endangered by mining. Iron cycling, i.e., the dissolution and subsequent precipitation of iron, is able to restitute canga duricrusts, generating new habitats for endangered biota in post-mining landscapes. As iron-reducing bacteria can accelerate this iron cycling, we aim to retrieve microbial enrichment cultures suitable to mediate the large-scale restoration of cangas. For that, we collected water and sediment samples from the Carajás National Forest and cultivated the iron-reducing microorganisms therein using a specific medium. We measured the potential to reduce iron using ferrozine assays, growth rate and metabolic activity. Six out of seven enrichment cultures effectively reduced iron, showing that different environments harbor iron-reducing bacteria. The most promising enrichment cultures were obtained from environments with repeated flooding and drying cycles, i.e., periodically inundated grasslands and a plateau of an iron mining waste pile characterized by frequent soaking. Selected enrichment cultures contained iron-reducing and fermenting bacteria, such as Serratia and Enterobacter. We found higher iron-reducing potential in enrichment cultures with a higher cell density and microorganism diversity. The obtained enrichment cultures should be tested for canga restoration to generate benefits for biodiversity and contribute to more sustainable iron mining in the region. Full article
(This article belongs to the Section Environmental Microbiology)
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14 pages, 2388 KiB  
Article
Determination of Non-Digestible Parts in Dairy Cattle Feces Using U-NET and F-CRN Architectures
by Cevher Özden, Mutlu Bulut, Demet Çanga Boğa and Mustafa Boğa
Vet. Sci. 2023, 10(1), 32; https://doi.org/10.3390/vetsci10010032 - 1 Jan 2023
Cited by 2 | Viewed by 2038
Abstract
Deep learning algorithms can now be used to identify, locate, and count items in an image thanks to advancements in image processing technology. The successful application of image processing technology in different fields has attracted much attention in the field of agriculture in [...] Read more.
Deep learning algorithms can now be used to identify, locate, and count items in an image thanks to advancements in image processing technology. The successful application of image processing technology in different fields has attracted much attention in the field of agriculture in recent years. This research was done to ascertain the number of indigestible cereal grains in animal feces using an image processing method. In this study, a regression-based way of object counting was used to predict the number of cereal grains in the feces. For this purpose, we have developed two different neural network architectures based upon Fully Convolutional Regression Networks (FCRN) and U-Net. The images used in the study were obtained from three different dairy cows enterprises operating in Nigde Province. The dataset consists of the 277 distinct dropping images of dairy cows in the farm. According to findings of the study, both models yielded quite acceptable prediction accuracy with U-Net providing slightly better prediction with a MAE value of 16.69 in the best case, compared to 23.65 MAE value of FCRN with the same batch. Full article
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20 pages, 654 KiB  
Article
Meat Intake, Cooking Methods, Doneness Preferences and Risk of Gastric Adenocarcinoma in the MCC-Spain Study
by Elena Boldo, Nerea Fernández de Larrea, Marina Pollán, Vicente Martín, Mireia Obón-Santacana, Marcela Guevara, Gemma Castaño-Vinyals, Jose María Canga, Beatriz Pérez-Gómez, Inés Gómez-Acebo, Guillermo Fernández-Tardón, Mercedes Vanaclocha-Espi, Rocío Olmedo-Requena, Juan Alguacil, Maria Dolores Chirlaque, Manolis Kogevinas, Nuria Aragonés and Adela Castelló
Nutrients 2022, 14(22), 4852; https://doi.org/10.3390/nu14224852 - 16 Nov 2022
Cited by 7 | Viewed by 3672
Abstract
Background: The association of meat intake with gastric adenocarcinoma is controversial. We examined the relation between white, red, and processed meat intake and gastric adenocarcinoma, considering doneness preference and cooking methods, by histological subtype and anatomical subsite. Methods: MCC-Spain is a multicase–control study [...] Read more.
Background: The association of meat intake with gastric adenocarcinoma is controversial. We examined the relation between white, red, and processed meat intake and gastric adenocarcinoma, considering doneness preference and cooking methods, by histological subtype and anatomical subsite. Methods: MCC-Spain is a multicase–control study that included 286 incident gastric adenocarcinoma cases and 2993 controls who answered a food-frequency questionnaire. The association of gastric adenocarcinoma with meat intake, doneness preference and cooking methods was assessed using binary multivariate logistic regression mixed models and a possible interaction with sex was considered. Multinomial logistic regression models were used to estimate risk by tumor subsite (cardia vs. non-cardia) and subtype (intestinal vs. diffuse). Sensitivity analyses were conducted comparing models with and without data on Helicobacter pylori infection. Results: The intake of red and processed meat increased gastric adenocarcinoma risk (OR for one serving/week increase (95% CI) = 1.11 (1.02;1.20) and 1.04 (1.00;1.08), respectively), specifically among men and for non-cardia and intestinal gastric adenocarcinoma. Those who consume well done white or red meat showed higher risk of non-cardia (white: RRR = 1.57 (1.14;2.16); red: RRR = 1.42 (1.00;2.02)) and intestinal tumors (white: RRR = 1.69 (1.10;2.59); red: RRR = 1.61 (1.02;2.53)) than those with a preference for rare/medium doneness. Stewing and griddling/barbequing red and white meat, and oven baking white meat, seemed to be the cooking methods with the greatest effect over gastric adenocarcinoma. The reported associations remained similar after considering Helicobacter pylori seropositivity. Conclusions: Reducing red and processed meat intake could decrease gastric adenocarcinoma risk, especially for intestinal and non-cardia tumors. Meat cooking practices could modify the risk of some gastric cancer subtypes. Full article
(This article belongs to the Section Nutritional Epidemiology)
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14 pages, 1809 KiB  
Article
Molecular Mechanisms Underlying Mimosa acutistipula Success in Amazonian Rehabilitating Minelands
by Sidney Vasconcelos do Nascimento, Héctor Herrera, Paulo Henrique de Oliveira Costa, Felipe Costa Trindade, Isa Rebecca Chagas da Costa, Cecílio Frois Caldeira, Markus Gastauer, Silvio Junio Ramos, Guilherme Oliveira and Rafael Borges da Silva Valadares
Int. J. Environ. Res. Public Health 2022, 19(21), 14441; https://doi.org/10.3390/ijerph192114441 - 4 Nov 2022
Cited by 1 | Viewed by 2311
Abstract
Mimosa acutistipula is endemic to Brazil and grows in ferruginous outcrops (canga) in Serra dos Carajás, eastern Amazon, where one of the largest iron ore deposits in the world is located. Plants that develop in these ecosystems are subject to severe [...] Read more.
Mimosa acutistipula is endemic to Brazil and grows in ferruginous outcrops (canga) in Serra dos Carajás, eastern Amazon, where one of the largest iron ore deposits in the world is located. Plants that develop in these ecosystems are subject to severe environmental conditions and must have adaptive mechanisms to grow and thrive in cangas. Mimosa acutistipula is a native species used to restore biodiversity in post-mining areas in canga. Understanding the molecular mechanisms involved in the adaptation of M. acutistipula in canga is essential to deduce the ability of native species to adapt to possible stressors in rehabilitating minelands over time. In this study, the root proteomic profiles of M. acutistipula grown in a native canga ecosystem and rehabilitating minelands were compared to identify essential proteins involved in the adaptation of this species in its native environment and that should enable its establishment in rehabilitating minelands. The results showed differentially abundant proteins, where 436 proteins with significant values (p < 0.05) and fold change ≥ 2 were more abundant in canga and 145 in roots from the rehabilitating minelands. Among them, a representative amount and diversity of proteins were related to responses to water deficit, heat, and responses to metal ions. Other identified proteins are involved in biocontrol activity against phytopathogens and symbiosis. This research provides insights into proteins involved in M. acutistipula responses to environmental stimuli, suggesting critical mechanisms to support the establishment of native canga plants in rehabilitating minelands over time. Full article
(This article belongs to the Special Issue Pollution and Remediation in Mining Areas)
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