Search Results (3,091)

Hypersaline environments are unique ecosystems harboring specialized microbial communities with significant biotechnological potential. This study provides a comprehensive characterization of the taxonomic diversity and functional potential of two Tunisian salterns, Abbassia (Kerkennah) and Thyna (Sfax), using an integrated approach that combines 16S/18S rRNA gene amplicons (Illumina and full-length Nanopore) with shotgun metagenomics. Taxonomic profiling revealed a high species richness (S ≈ 1250 taxa); however, the Abbassia site was characterized by extreme taxonomic polarization, with over 95% of the community dominated by specialized halophilic Bacillota (Salinicoccus and Jeotgalicoccus). In contrast, Thyna exhibited a more even distribution dominated by Pseudomonadota and methanogenic Archaea. Beyond taxonomy, functional annotation via the HUMAnN 3.0 pipeline identified site-specific metabolic specializations. Abbassia was enriched in biosynthetic pathways and robust stress-response mechanisms, including ectoine biosynthesis and ppGpp-mediated stringent response, reflecting adaptation to stable hypersaline conditions. Conversely, Thyna’s microbiome prioritized energy extraction and nutrient recycling, with a high abundance of fermentation and glyoxylate cycle pathways. These findings demonstrate that environmental filtering shapes not only the microbial structure but also the metabolic landscape, highlighting the ecological plasticity of microbial life in extreme Tunisian salterns. Full article

Phytopathogenic bacteria and fungi significantly reduce fruit and vegetable yields, resulting in substantial economic losses. Conventional management relies on synthetic agrochemicals; however, their intensive use poses risks to human health, environmental integrity, and biodiversity. Snake venoms have evolved under selective pressure, developing specialized components with potent antimicrobial properties as part of a defense mechanism against prey-borne microorganisms. This study evaluated the inhibitory potential of Micrurus venoms against pathogens of agricultural interest and developed bioactive gelatin-based films incorporated with purified L-amino acid oxidases (LAAOs) as a novel biocontrol strategy. Venoms from M. ancoralis, M. mipartitus, and M. dumerilii exhibited significant growth inhibition against Xanthomonas and Fusarium strains. The primary active component was identified as LAAO through biological activity and mass spectrometry. Biofilms were formulated by incorporating M. ancoralis venom and its purified LAAO into a gelatin matrix. Physicochemical and microbiological characterization, alongside in situ assays on strawberries, demonstrated that the functionalized biofilms retained potent antimicrobial activity. Furthermore, LAAO incorporation did not significantly alter the physicochemical properties of the fruit but effectively extended shelf life by reducing weight loss and maintaining sensory appearance. These findings highlight the biotechnological potential of elapid venom components in the development of alternatives for phytopathogen control and active food packaging. Full article

In recent times, the importance given to versatile functional nutrition has increased, escalating interest in fermented foods and their potential health benefits. Fermentation is an ancient method frequently used to develop functional and bioactive products. Fermented microalgae and their biomass are important sustainable biotechnological resources for increasing the nutritional value, healthiness, and functionality of foods and for producing high-value-added bioactive compounds. The fermentation of microalgae encompasses the conversion of carbohydrates into sugar or organic substances by a range of microorganisms, particularly lactic acid bacteria (LAB). The fermentation process can activate numerous beneficial mechanisms by enhancing the bioavailability of bioactive compounds in microalgae. Lactic acid bacteria are widely used in food fermentation due to their safety and metabolic versatility. Their ability to produce organic acids, enzymes, and bioactive metabolites makes them suitable for modifying microalgal biomass. This review aims to provide a detailed and critical evaluation of fermented microalgae, including health effects, functional enhancements, bioactivities, and industrial applications. Full article

Cyanobacterial species in the Arabian Peninsula region display a diverse range of potential biotechnological application. This review summarizes the cyanobacteria diversity found in the Peninsula region, the bioactive compounds found in these species, and the several health benefits and applications. The Arabian Peninsula region comprises a wide range of cyanobacteria with representatives from the orders Oscillatoriales, Chroococcales, Stigonematales, and Nostocales. These microorganisms produce specialized metabolites such as photosynthetic pigments, pigment–protein complexes, lipopeptides, phenolic compounds, and unique secondary metabolites. Many of the metabolites offer beneficial biological functions including antioxidants, antibacterial, anti-cancer, anti-inflammatory antiviral, and neuroprotective ones. In addition to the medical-related practices, cyanobacteria in the Peninsula region might have several other applications. Other probable uses include their potential bioremediation capability to remove pollutants or heavy metals, as a potential biohydrogen source for renewable energy, and as biofertilizers and soil enhancement to support sustainable agriculture; other useful applications include bioplastics production (polyhydroxyalkanoates), soil microbiota improvement, and methane reduction. The review highlights the potential diverse biotechnological applications of Arabian Peninsula cyanobacteria toward bioremediation, bioplastics, ecosystem regeneration, biofertilizers, bioenergy, and agro-sustainability, as well as human health. This review highlights the importance of the further exploration and exploitation of these resourceful microorganisms for sustainable development in the Arabian Peninsula region. Full article

The global demand for sustainable protein sources has led to increased interest in macroalgae, particularly red seaweed, due to their rich nutritional content and bioactive compounds, which translates into a wide range of biotechnological applications. This study compares the biochemical profiles, specifically pigments and proteins, as well as antioxidant activity, of four red seaweed species, namely Nitophyllum punctatum, Chondria coerulescens, Plocamium cartilagineum and Sphaerococcus coronopifolius. The aim was to compare wild and cultivated biomasses to identify optimal cultivation strategies for maximizing their value. The results show that culture conditions have a significant impact on pigment and protein content, as well as antioxidant potential, for all species. While all cultured species showed increased protein content, specific responses in pigment production and antioxidant activity were clearly species-dependent. These results highlight the specific culture conditions required to produce pigments or antioxidant activities on a species-by-species basis. As these four red seaweed species remain relatively underexplored, further targeted research is required to refine cultivation methods and enhance our understanding of their biotechnological value. Full article

In vitro methods rely on costly chemical inputs, such as synthetic nutrients, prompting us to search for sustainable alternatives. This study evaluated wastewater generated from the cigarette butt (CB) recycling process as a potential growth stimulant additive for in vitro plant cultivation. Seeds of Brachiaria ruziziensis Germain & Evrard were sown on agar media containing increasing CB wastewater concentrations from 0 to 25% v/v (CB0 to CB25, respectively) under controlled conditions. Germination was monitored over 10 days, and functional and physiological traits of shoot and root systems were assessed at the end. Responses were concentration-dependent and consistent with hormesis. Low concentrations, particularly CB2, enhanced germination (92.2% vs. ~67% in CB0), shoot elongation (~6 vs. 3.4 cm), and total biomass (~47 vs. ~33 mg fresh weight), while maintaining total chlorophyll and increasing carotenoids (147.8 vs. 103.3 µg g⁻¹ FW) and chlorophyll a/b ratio (2.1 vs. 1.5). Contrarily, higher concentrations (≥CB10) reduced germination (47.6% at CB25), strongly inhibited root growth (0.5 cm at CB25), decreased total biomass (~19 mg at CB25), led to growth disorders, and reduced pigment stability. These inhibitory effects were associated with the accumulation of CB-derived compounds, including high nicotine levels and unbalanced nutrients. At low concentrations, coordinated root aerenchyma formation and modulation of stomatal density indicated anatomical plasticity under mild stress conditions, although their physiological significance remains to be clarified. Overall, CB recycling-derived wastewater can act as an effective growth stimulant for B. ruziziensis in vitro when applied at low concentrations, offering a potential alternative for plant biotechnology while contributing to waste valorization. Full article

Beyond its function as a carrier of hereditary information, recent research has uncovered novel properties of extracellular DNA, including its role in the adaptation to the environment when released from plants. The secreted DNA has been shown to exert insecticidal effects against insect pests, which play an adaptive role in plant-insect interactions, particularly in regulating populations of economically important sap-feeding insects. The molecular mechanisms underlying this insecticidal effect are underinvestigated and remain largely unknown. Therefore, there is a need for more efforts to uncover these mechanisms to better understand plant–pest interactions, which would provide new insights into natural pest control strategies and inspire biotechnological applications. In the current study, we show that Pittosporum tobira (P. tobira) secretes single-stranded DNA (ssDNA) that exerts an insecticidal effect on Coccus hesperidum (C. hesperidum). We collected extracellular DNA from P. tobira leaves and tested its potential insecticidal effect by applying it to C. hesperidum, which is a well-known pest that causes damage to P. tobira. Our results revealed that the outermost layer of the leaf cuticle of P. tobira predominantly contains ssDNA of approximately 100 nt in length, originating from both chloroplast and nuclear genomes. This DNA exhibited pronounced insecticidal activity against C. hesperidum, with chloroplast-derived sequences significantly enriched compared to the total DNA in intact plant cells. These findings suggest that the microevolution of the P. tobira nucleome and plastome contributed to the formation of extracellular DNA with insecticidal properties (eci-DNA), which is part of its defense strategy against insect pests. Moreover, in this article, for the first time, we show that antisense DNA (illustrated with oligonucleotide insecticide Coccus-11) is capable of activating insect retrotransposons and upregulating their RT-RNase H, a crucial enzyme for the DNA containment mechanism and successful action of oligonucleotide insecticides. Notably, the laboratory-developed ssDNA-based ‘genetic zipper’ technology, designed for sustainable pest management, possesses characteristics similar to eci-DNA found in nature, highlighting a potential natural parallel to this biotechnological approach for sustainable pest management. Full article

Guaje (Leucaena leucocephala), mezquite (Prosopis laevigata), and guamuchil (Pithecellobium dulce) are leguminous trees distributed throughout southeastern Mexico. Their pods and seeds constitute the main agroecological residues and represent a natural source of secondary metabolites with high biotechnological potential. The aim of this study was to determine the chemical composition, antimicrobial and antioxidant activities, and toxicity of the pods and seeds of L. leucocephala, P. laevigata, and P. dulce. It was found that pod extracts contained higher concentrations of phenolic compounds, flavonoids, and terpenes than seed extracts. Antimicrobial assays showed inhibition zones ranging from 8.1–14.7 mm (E. coli), 8.8–15.1 mm (S. aureus), 11.3–15.4 mm (E. faecalis), 8.9–24.1 mm (C. albicans), and 8.5–22.6 mm (C. krusei). The ethyl acetate (AVPD) and ethanolic (EVPD) extracts from P. dulce pods showed the highest antimicrobial activity, with MIC values ranging from 0.03 to 0.15 mg/mL, MBC values of 0.07 mg/mL (S. aureus and E. faecalis), and MFC values of 1.25 mg/mL (C. albicans) and 0.62 mg/mL (C. krusei). Antioxidant activity was higher in pod extracts, with AVPD and EVPD showing IC₅₀ values of 0.257 and 0.320 mg/mL, respectively. Consistently, EVPD exhibited the highest phenolic content (133.24 mg GAE/g) and flavonoid content (50.90 mg QE/g), followed by AVPD (87.29 mg GAE/g and 42.40 mg QE/g, respectively). The results indicate that pod extracts of L. leucocephala and P. dulce contain secondary metabolites with broad antimicrobial and antioxidant potential and low toxicity. Full article

Colombian palm wine is a traditional fermented beverage produced from the sap of Attalea butyracea, whose microbiota and biochemical features remain poorly characterized. A comprehensive analytical framework was applied to palm wine samples from three Andean producers. This included the determination of proximate composition, total phenolic content, and antioxidant activity, alongside a dual microbiological approach: traditional plate counting and high-throughput 16S rRNA/ITS metabarcoding. PICRUSt2 was employed to predict KEGG-based metabolic pathways to elucidate the microbial functional potential. The wines exhibited a low pH (3.35–3.65), a variable ethanol content (1.62–8.40 g/L), high residual sugars, moderate microbial loads, and limited antioxidant activity (as measured using the ABTS and DPPH assays). Analysis using high-throughput sequencing revealed high bacterial community diversity, dominated by Liquorilactobacillus nagelii, Limosilactobacillus fermentum, Limosilactobacillus panis, Lacticaseibacillus casei, and Zymomonas mobilis alongside the yeast Saccharomyces cerevisiae. Functional profiling revealed a significant enrichment in metabolic pathways related to carbohydrates, amino acids, and cofactors/vitamins, as well as xenobiotic biodegradation and metabolism. These findings provide the first integrated microbiological and physicochemical characterization of Colombian palm wine and highlight its biotechnological potential. Full article

Antibiotic resistance has become a significant challenge for global health. Exploring novel antimicrobial compounds as alternatives to antibiotics is increasingly prominent in combating resistant pathogens. Antimicrobial peptides (AMPs), produced by various organisms, are considered natural antibiotic candidates that can be used against multidrug-resistant microorganisms. The snakin family of plant-based AMPs is a promising candidate for use in the agriculture, food and pharmaceutical industries due to its antimicrobial activity against both phytopathogenic and clinical species. This review summarizes current AMP databases and the snakin family of plant AMPs deposited in the Universal Protein Resource, UniProt. It also provides knowledge about potential uses of this family in biotechnology. Full article

Marine macroalgae, microalgae, and associated microorganisms are increasingly recognised as valuable sources of bioactive compounds with applications across biotechnology and health. The environmental and ecological conditions they inhabit shape their metabolite diversity, leading to the production of high-value compounds such as sulphated polysaccharides, lipids, pigments, phenolics, and peptides. These compounds exhibit conserved biological activities that underpin potent antioxidant, anti-inflammatory, cytotoxic, and pro-regenerative effects with strong potential for translation. Although external factors drive rich metabolite diversity, continual variation can also lead to translational constraints including heavy-metal accumulation, inconsistency in extract composition, and regulatory complexity. This review examines the environmental drivers of metabolite diversity and the functional potential of bioactives derived from marine algae. We focus on their translational application within four areas of growing interest: nutraceuticals, cosmetics, regenerative medicine, and oncology, where emerging evidence suggests their promise as next-generation bioactive ingredients and therapeutic leads. In addition, insights from Irish and Welsh Small and Medium Enterprises (SMEs) are collated to identify key bottlenecks in commercialisation and the requirements for effective marine biodiscovery pipelines. We consider the importance of controlled cultivation, standardised analytics, preclinical testing platforms, and collaborative innovation ecosystems and highlight the need for coordinated scientific, technical, and regulatory advances to unlock the full translational potential of marine-derived compounds. Full article

This study characterizes novel cross-linked polymeric composites based on bisphenol A glycerolate dimethacrylate (BPA.DM) as the primary matrix, incorporating 1-vinyl-2-pyrrolidone (NVP) or 2-hydroxyethyl methacrylate (HEMA) as active diluents, and modified with antimicrobial agents: zinc oxide (ZnO), copper(II) sulfate (CuSO₄), nanosilver (Ag), and benzethonium chloride (BEN). Release kinetics of active components into water and LH medium were measured over 20 days using HPLC (bisphenol A, benzethonium chloride), GF AAS (Cu, Zn, Ag), and GC–MS, revealing highest silver release from HEMA+Ag composites (1671 µg/L), substantial copper release from HEMA (354 mg/L) and NVP (319 mg/L) systems, while benzethonium chloride exhibited significantly lower migration. The effect of NVP- and HEMA-containing composites on the metabolism of the Cerrena unicolor was also assessed. Scanning electron microscopy (SEM) and optical profilometry confirmed extensive surface degradation by C. unicolor mycelium, manifesting as cracks, increased porosity, and altered surface across HEMA- and NVP-based composites after 21-day incubation. Biochemical analysis of the fungus post-culture liquids demonstrated that both composite types markedly enhanced extracellular laccase activity at all tested time points (7, 14, 21 days), with ethanol-sterilized samples inducing a slower-migrating laccase isoform identified via zymography. These materials also increased total protein concentration and superoxide anion radical levels while reducing phenolic compounds relative to controls. The findings demonstrate that antimicrobial-modified BPA.DM composites not only undergo controlled biodegradation by C. unicolor but crucially serve as potential laccase inducers, highlighting their dual utility in bioactive material design and fungal enzyme biotechnology. Full article

The increasing volume of plant-based waste generated by the agri-food sector represents both an environmental challenge and an underexploited biotechnological resource. These wastes, rich in lignocellulosic compounds, constitute a natural habitat for specialized microorganisms. The aim of this article is to provide a critical review of the potential use of such wastes—specifically straw, pomace, and manure—in two complementary ways: (1) as a specific source for isolating new microbial strains with high biodegradation capacity and plant-growth-promoting potential, and (2) as a low-cost substrate for their propagation, e.g., in solid-state fermentation processes. This dual perspective represents a novel, integrative approach, as previous reviews typically address these aspects in isolation rather than considering their synergistic potential. The article discusses the relationship between the chemical composition of selected wastes (straw, pomace, manure) and the targeted selection of desirable microbiological traits. Particular emphasis is placed on advanced, integrated approaches for assessing microbial potential, combining phenotyping (zymography, activity assays), genomics (whole-genome sequencing—WGS, identification of CAZyme genes and biosynthetic gene clusters), and metabolomics (metabolite profiling, 3D MSI imaging). The limitations of individual methods are critically evaluated, and key research gaps are identified, including the need for in situ validation of omics-based findings and the development of stable microbial consortia with predictable performance under variable environmental conditions. These gaps are discussed in the broader context of circular bioeconomy and sustainable agriculture, highlighting the strategic relevance of integrating waste valorization with microbiome-based biotechnological innovations. Full article

Brassica napus L. is a globally important crop and its productivity is constrained by multiple abiotic stresses (salinity, drought, and heat). Calcineurin B-like proteins (CBLs) act as calcium sensors and play key roles in regulating ion homeostasis and stress-responsive signaling pathways, thereby contributing to plant adaptation under unfavorable environmental conditions. Here, through detailed bioinformatics analyses, the BnCBL gene family has been identified along with its role in tolerance to multiple abiotic stresses. The identified 17 BnCBLs comprised four groups, as in Arabidopsis thaliana. The predicted molecular weights of the CBL proteins ranged from approximately 24.35 kDa (BnCBL3 and -9) to 29.7 kDa (BnCBL5), with protein lengths spanning 213 (BnCBL3, -9, -10, -12 and -15) to 260 amino acids (BnCBL5). Sequence, promoter, and structural analyses showed that BnCBL proteins harbor palmitoylation and myristoylation motifs in their EF-hand domains, contain hormone- and stress-responsive cis-elements, and exhibit characteristic post-translational modification sites and tertiary structures. RNA-seq and RT-qPCR expression analyses showed that several BnCBL genes (BnCBL2, -6, -9, -10, and -15) exhibit differential expression (3~6-fold) under NaCl, drought, and heat stresses, as well as in response to phytohormones (IAA, GA₃, ABA, and JA). In addition, BnCBL2, -3, -6, -8, -9, -11, -12 and -16 showed significant expression (around 7-fold) against biotic stresses (Sclerotinia sclerotiorum (Lib.) de Bary and Plasmodiophora brassicae (Woronin, 1877), indicating their roles in both biotic and abiotic stress tolerance and potential utility in biotechnological breeding of stress-enduring B. napus cultivars. Full article

Biosurfactant production by hydrocarbon-degrading bacteria is strongly influenced by the nature and concentration of available carbon substrates, which determine hydrocarbon bioavailability and microbial metabolic responses. In this study, five Bacillus subtilis strains isolated from weathered oil-contaminated sites in Qatar were evaluated for growth and biosurfactant activity using diesel fuel, fresh corn oil, and five-times-overheated corn oil as sole carbon sources. Cultures were grown in mineral salts medium under controlled conditions, and biosurfactant production was assessed through emulsification activity (EA), solubilization activity (SA), and colony-forming unit counts. All strains grew on the tested substrates but exhibited distinct strain-specific responses. Fresh corn oil supported the highest biomass production with values up to 3.3 × 10⁷ CFU mL⁻¹, whereas the strongest emulsification activity yield was observed in diesel cultures at low carbon loading (59 ± 2.3 EU g⁻¹ carbon. Five-times-overheated corn oil maintained more stable emulsification activity across a broader concentration range, indicating tolerance to oxidized hydrocarbons and adaptation to chemically altered substrates. Increasing hydrocarbon concentrations led to progressive declines in EA and SA, indicating inhibitory effects at high substrate loads. Overall, biosurfactant production did not correlate directly with biomass, highlighting the importance of substrate properties in regulating functional output. These findings demonstrate that substrate composition and concentration are key determinants of biosurfactant performance in B. subtilis isolates and support the potential use of waste oils as low-cost feedstocks for biotechnological and bioremediation applications. Full article