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11 Results Found

  • Article
  • Open Access
8 Citations
5,598 Views
12 Pages

The TAFs of TFIID Bind and Rearrange the Topology of the TATA-Less RPS5 Promoter

  • Sarah N. Le,
  • Christopher R. Brown,
  • Stacy Harvey,
  • Hinrich Boeger and ,
  • Hans Elmlund and
  • Dominika Elmlund
  • + 1 author+ 0 author

The general transcription factor TFIID is a core promoter selectivity factor that recognizes DNA sequence elements and nucleates the assembly of a pre-initiation complex (PIC). The mechanism by which TFIID recognizes the promoter is poorly understood...

(This article belongs to the Collection Feature Papers in “Molecular Biology”)
  • Article
  • Open Access
27 Citations
5,550 Views
20 Pages

23 July 2020

One of the most conserved cellular pathways among eukaryotes is the extensively studied classical protein nuclear import pathway mediated by importin-α. Classical nuclear localization signals (cNLSs) are recognized by importin-α and are h...

  • Review
  • Open Access
40 Citations
11,319 Views
14 Pages

MultiBac: Baculovirus-Mediated Multigene DNA Cargo Delivery in Insect and Mammalian Cells

  • Kapil Gupta,
  • Christine Tölzer,
  • Duygu Sari-Ak,
  • Daniel J. Fitzgerald and ,
  • Christiane Schaffitzel and
  • Imre Berger
  • + 1 author+ 0 author

26 February 2019

The baculovirus/insect cell system (BICS) is widely used in academia and industry to produce eukaryotic proteins for many applications, ranging from structure analysis to drug screening and the provision of protein biologics and therapeutics. Multi-p...

(This article belongs to the Special Issue Baculovirus Advances and Applications)
  • Review
  • Open Access
30 Citations
9,601 Views
22 Pages

Non-coding antisense transcripts arise from the strand opposite the sense strand. Over 70% of the human genome generates non-coding antisense transcripts while less than 2% of the genome codes for proteins. Antisense transcripts and/or the act of ant...

(This article belongs to the Section Computational Biology)
  • Review
  • Open Access
4 Citations
3,274 Views
19 Pages

Polycomb Recruiters Inside and Outside of the Repressed Domains

  • Maksim Erokhin,
  • Vladic Mogila,
  • Dmitry Lomaev and
  • Darya Chetverina

The establishment and stable inheritance of individual patterns of gene expression in different cell types are required for the development of multicellular organisms. The important epigenetic regulators are the Polycomb group (PcG) and Trithorax gro...

(This article belongs to the Special Issue Molecular Genetics of Drosophila Development)
  • Review
  • Open Access
9 Citations
5,614 Views
13 Pages

Enhancer-Mediated Formation of Nuclear Transcription Initiation Domains

  • Matthew D. Gibbons,
  • Yu Fang,
  • Austin P. Spicola,
  • Niko Linzer and ,
  • Stephen M. Jones,
  • Breanna R. Johnson,
  • Lu Li,
  • Mingyi Xie and
  • Jörg Bungert
  • + 4 authors+ 0 author

18 August 2022

Enhancers in higher eukaryotes and upstream activating sequences (UASs) in yeast have been shown to recruit components of the RNA polymerase II (Pol II) transcription machinery. At least a fraction of Pol II recruited to enhancers in higher eukaryote...

(This article belongs to the Special Issue Transcriptional Regulation: Molecules, Involved Mechanisms and Misregulation)
  • Article
  • Open Access
5 Citations
2,012 Views
29 Pages

Characterization of TBP and TAFs in Mungbean (Vigna radiata L.) and Their Potential Involvement in Abiotic Stress Response

  • Ranran Wu,
  • Qiyuan Jia,
  • Yingjian Guo,
  • Yun Lin and ,
  • Jinyang Liu,
  • Jingbin Chen,
  • Qiang Yan,
  • Na Yuan,
  • Chenchen Xue and
  • Xingxing Yuan
  • + 6 authors+ 1 author

3 September 2024

The TATA-box binding protein (TBP) and TBP-associated factors (TAFs) constitute the transcription factor IID (TFIID), a crucial component of RNA polymerase II, essential for transcription initiation and regulation. Several TFIID subunits are shared w...

(This article belongs to the Special Issue New Insights in Plant Abiotic Stress)
  • Article
  • Open Access
14 Citations
3,907 Views
16 Pages

Knockdown of a Novel Gene OsTBP2.2 Increases Sensitivity to Drought Stress in Rice

  • Yong Zhang,
  • Limei Zhao,
  • Hong Xiao,
  • Jinkiat Chew and ,
  • Jinxia Xiang,
  • Kaiyun Qian and
  • Xiaorong Fan
  • + 2 authors+ 0 author

8 June 2020

Drought stress is a major environmental stress, which adversely affects the biological and molecular processes of plants, thereby impairing their growth and development. In the present study, we found that the expression level of OsTBP2.2 which encod...

(This article belongs to the Section Plant Genetics and Genomics)
  • Article
  • Open Access
4 Citations
3,531 Views
18 Pages

The genetic control of host response to the fungal necrotrophic disease Septoria nodorum blotch (SNB) in bread wheat is complex, involving many minor genes. Quantitative trait loci (QTL) controlling SNB response were previously identified on chromoso...

(This article belongs to the Special Issue Genetics and Breeding of Wheat)
  • Article
  • Open Access
4 Citations
4,194 Views
15 Pages

Initiator-Directed Transcription: Fission Yeast Nmtl Initiator Directs Preinitiation Complex Formation and Transcriptional Initiation

  • Diego A. Rojas,
  • Fabiola Urbina,
  • Lucía Valenzuela-Pérez,
  • Lorenzo Leiva and ,
  • Vicente J. Miralles and
  • Edio Maldonado
  • + 1 author+ 0 author

28 January 2022

The initiator element is a core promoter element encompassing the transcription start site, which is found in yeast, Drosophila, and human promoters. This element is observed in TATA-less promoters. Several studies have defined transcription factor r...

(This article belongs to the Section Molecular Genetics and Genomics)
  • Review
  • Open Access
25 Citations
15,285 Views
23 Pages

On the Role of TATA Boxes and TATA-Binding Protein in Arabidopsis thaliana

  • L. K. Savinkova,
  • E. B. Sharypova and
  • N. A. Kolchanov

22 February 2023

For transcription initiation by RNA polymerase II (Pol II), all eukaryotes require assembly of basal transcription machinery on the core promoter, a region located approximately in the locus spanning a transcription start site (−50; +50 bp). Al...

(This article belongs to the Section Plant Molecular Biology)