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210 Results Found

  • Review
  • Open Access
27 Citations
8,591 Views
22 Pages

Nuclear magnetic resonance (NMR) spectroscopy is a powerful method for studying the structure and dynamics of proteins in their native state. For high-resolution NMR structure determination, the collection of a rich restraint dataset is necessary. Th...

  • Article
  • Open Access
2 Citations
2,884 Views
16 Pages

The Rosetta Stone Hypothesis-Based Interaction of the Tumor Suppressor Proteins Nit1 and Fhit

  • Sonnhild Mittag,
  • Franziska Wetzel,
  • Sebastian Y. Müller and
  • Otmar Huber

17 January 2023

In previous studies, we have identified the tumor suppressor proteins Fhit (fragile histidine triad) and Nit1 (Nitrilase1) as interaction partners of β-catenin both acting as repressors of the canonical Wnt pathway. Interestingly, in D. melanoga...

  • Feature Paper
  • Article
  • Open Access
12 Citations
5,416 Views
18 Pages

Rosetta Mission: Electron Scattering Cross Sections—Data Needs and Coverage in BEAMDB Database

  • Bratislav P. Marinković,
  • Jan Hendrik Bredehöft,
  • Veljko Vujčić,
  • Darko Jevremović and
  • Nigel J. Mason

17 November 2017

The emission of [O I] lines in the coma of Comet 67P/Churyumov-Gerasimenko during the Rosetta mission have been explained by electron impact dissociation of water rather than the process of photodissociation. This is the direct evidence for the role...

  • Article
  • Open Access
63 Citations
12,884 Views
15 Pages

17 March 2015

Rosetta Promontory, Egypt has been suffering from a continuous erosion problem. The dramatic retreatment was observed during the last century. It is basically due to the construction of Aswan High Dam in 1964, which reduced the flow and sediment disc...

  • Article
  • Open Access
9 Citations
2,951 Views
11 Pages

11 August 2022

Lipases are remarkable biocatalysts and are broadly applied in many industry fields because of their versatile catalytic capabilities. Considering the harsh biotechnological treatment of industrial processes, the activities of lipase products are req...

  • Article
  • Open Access
7 Citations
3,604 Views
22 Pages

G protein-coupled receptors (GPCRs) are the largest class of drug targets and undergo substantial conformational changes in response to ligand binding. Despite recent progress in GPCR structure determination, static snapshots fail to reflect the conf...

  • Article
  • Open Access
6 Citations
4,395 Views
22 Pages

10 September 2021

A key parameter for the design of soil drainage and irrigation facilities and for the modelling of surface runoff and erosion phenomena in land-formed areas is the saturated hydraulic conductivity (Ks). There are many methods for determining its valu...

  • Feature Paper
  • Article
  • Open Access
2 Citations
1,550 Views
10 Pages

The Rosetta Phenotype Harmonization Method Facilitates Finding a Relationship Quantitative Trait Locus for a Complex Cognitive Trait

  • Stephen A. Petrill,
  • Brett G. Klamer,
  • Steven Buyske,
  • Erik G. Willcutt,
  • Jeffrey R. Gruen,
  • David J. Francis,
  • Judy F. Flax,
  • Linda M. Brzustowicz and
  • Christopher W. Bartlett

31 August 2023

Genetics researchers increasingly combine data across many sources to increase power and to conduct analyses that cross multiple individual studies. However, there is often a lack of alignment on outcome measures when the same constructs are examined...

  • Article
  • Open Access
5 Citations
4,517 Views
18 Pages

10 July 2019

Influences exerted by cultural heritage properties on developments in architecture, town planning, or landscape design represent one of the criteria that are used to evaluate the Outstanding Universal Value of the properties nominated for listing as...

  • Review
  • Open Access
48 Citations
6,323 Views
23 Pages

8 November 2019

A review of the properties of the Tarantula Nebula (30 Doradus) in the Large Magellanic Cloud is presented, primarily from the perspective of its massive star content. The proximity of the Tarantula and its accessibility to X-ray through radio observ...

  • Article
  • Open Access
10 Citations
6,626 Views
23 Pages

16 September 2020

Three-finger toxins (3FTX) are a group of peptides that affect multiple receptor types. One group of proteins affected by 3FTX are nicotinic acetylcholine receptors (nAChR). Structural information on how neurotoxins interact with nAChR is limited and...

  • Article
  • Open Access
23 Citations
8,205 Views
11 Pages

7 August 2019

Nanobodies (VHHs) overcome many of the drawbacks of conventional antibodies, and the related technologies represent state-of-the-art and advanced applications in scientific research, pharmaceuticals, and therapies. In terms of productivity and econom...

  • Article
  • Open Access
276 Views
30 Pages

11 January 2026

The Clausius–Mossotti (CM) factor underpins the theoretical description of dielectrophoresis (DEP) and is widely used in micro- and nano-scale systems for frequency-dependent particle and cell manipulation. It has further been proposed as an &l...

  • Article
  • Open Access
5 Citations
4,212 Views
14 Pages

Expression, Purification, and Characterization of Plasmodium vivax Lactate Dehydrogenase from Bacteria without Codon Optimization

  • Yeon-Jun Kim,
  • Jun-Seop Shin,
  • Kang Woo Lee,
  • Hyo-Ji Eom,
  • Byung Gwan Jo,
  • Jin Woo Lee,
  • Jun Hyoung Kim,
  • So Yeon Kim,
  • Jung Hoon Kang and
  • Jae-Won Choi

Plasmodium vivax is the most widespread cause of malaria, especially in subtropical and temperate regions such as Asia-Pacific and America. P. vivax lactate dehydrogenase (PvLDH), an essential enzyme in the glycolytic pathway, is required for the dev...

  • Article
  • Open Access
2 Citations
3,010 Views
16 Pages

Rosetta CONSERT Data as a Testbed for In Situ Navigation of Space Probes and Radiosciences in Orbit/Escort Phases for Small Bodies of the Solar System

  • Mao Ye,
  • Fei Li,
  • Jianguo Yan,
  • Alain Hérique,
  • Wlodek Kofman,
  • Yves Rogez,
  • Thomas P. Andert,
  • Xi Guo and
  • Jean-Pierre Barriot

18 September 2021

Many future space missions to asteroids and comets will implement autonomous or near-autonomous navigation, in order to save costly observation time from Earth tracking stations, improve the security of spacecraft and perform real-time operations. Ex...

  • Article
  • Open Access
15 Citations
4,367 Views
20 Pages

Comparison, Analysis, and Molecular Dynamics Simulations of Structures of a Viral Protein Modeled Using Various Computational Tools

  • Hemalatha Mani,
  • Chun-Chun Chang,
  • Hao-Jen Hsu,
  • Chin-Hao Yang,
  • Jui-Hung Yen and
  • Je-Wen Liou

The structural analysis of proteins is a major domain of biomedical research. Such analysis requires resolved three-dimensional structures of proteins. Advancements in computer technology have led to progress in biomedical research. In silico predict...

  • Article
  • Open Access
4 Citations
4,649 Views
18 Pages

Divergent Evolution of Eukaryotic CC- and A-Adding Enzymes

  • Lieselotte Erber,
  • Paul Franz,
  • Heike Betat,
  • Sonja Prohaska and
  • Mario Mörl

Synthesis of the CCA end of essential tRNAs is performed either by CCA-adding enzymes or as a collaboration between enzymes restricted to CC- and A-incorporation. While the occurrence of such tRNA nucleotidyltransferases with partial activities seeme...

  • Article
  • Open Access
6 Citations
4,326 Views
29 Pages

Ab Initio Modelling of the Structure of ToxA-like and MAX Fungal Effector Proteins

  • Lina Rozano,
  • Yvonne M. Mukuka,
  • James K. Hane and
  • Ricardo L. Mancera

Pathogenic fungal diseases in crops are mediated by the release of effector proteins that facilitate infection. Characterising the structure of these fungal effectors is vital to understanding their virulence mechanisms and interactions with their ho...

  • Article
  • Open Access
1 Citations
3,484 Views
13 Pages

Plasmodium knowlesi is the only Plasmodium that causes zoonotic disease among the Plasmodium that cause infection in humans. It is fatal due to its short asexual growth cycle within 24 h. Lactate dehydrogenase (LDH), an enzyme that catalyzes the fina...

  • Article
  • Open Access
3,686 Views
12 Pages

1 April 2021

(1) Background: Simulation of soil water infiltration process and analysis of its influencing factors are important for water resources management. (2) Methods: In this study, the relative contributions of the soil water retention characteristics (SW...

  • Article
  • Open Access
7 Citations
4,558 Views
17 Pages

In Silico Protein Folding Prediction of COVID-19 Mutations and Variants

  • Sumana Bhowmick,
  • Tim Jing,
  • Wei Wang,
  • Elena Y. Zhang,
  • Frank Zhang and
  • Yanmin Yang

10 November 2022

With its fast-paced mutagenesis, the SARS-CoV-2 Omicron variant has threatened many societies worldwide. Strategies for predicting mutagenesis such as the computational prediction of SARS-CoV-2 structural diversity and its interaction with the human...

  • Article
  • Open Access
7 Citations
3,589 Views
16 Pages

Validation and Modification of the Van Genuchten Model for Eroded Black Soil in Northeastern China

  • Shuang Li,
  • Yun Xie,
  • Yan Xin,
  • Gang Liu,
  • Wenting Wang,
  • Xiaofei Gao,
  • Junrui Zhai and
  • Jing Li

24 September 2020

The soil water characteristic curve is highly related to soil physical characteristics, which may be affected by the soil erosion degree. To explore the applicability of the soil moisture characteristic curve model in northeastern China, two erosion...

  • Article
  • Open Access
6 Citations
5,875 Views
13 Pages

Optimal Choice of Soil Hydraulic Parameters for Simulating the Unsaturated Flow: A Case Study on the Island of Miyakojima, Japan

  • Ken Okamoto,
  • Kazuhito Sakai,
  • Shinya Nakamura,
  • Hiroyuki Cho,
  • Tamotsu Nakandakari and
  • Shota Ootani

20 October 2015

We examined the influence of input soil hydraulic parameters on HYDRUS-1D simulations of evapotranspiration and volumetric water contents (VWCs) in the unsaturated zone of a sugarcane field on the island of Miyakojima, Japan. We first optimized the p...

  • Article
  • Open Access
6 Citations
5,369 Views
25 Pages

26 May 2024

In this paper, we propose a novel, vision-transformer-based end-to-end pose estimation method, LidPose, for real-time human skeleton estimation in non-repetitive circular scanning (NRCS) lidar point clouds. Building on the ViTPose architecture, we in...

  • Article
  • Open Access
31 Citations
6,805 Views
26 Pages

Parameterization of Soil Hydraulic Parameters for HYDRUS-3D Simulation of Soil Water Dynamics in a Drip-Irrigated Orchard

  • Jesús María Domínguez-Niño,
  • Gerard Arbat,
  • Iael Raij-Hoffman,
  • Isaya Kisekka,
  • Joan Girona and
  • Jaume Casadesús

28 June 2020

Although surface drip irrigation allows an efficient use of water in agriculture, the heterogeneous distribution of soil water complicates its optimal usage. Mathematical models can be used to simulate the dynamics of water in the soil below a drippe...

  • Article
  • Open Access
9 Citations
3,517 Views
13 Pages

7 August 2023

Human hematopoietic prostaglandin D2 synthase (HPGDS) is involved in the production of prostaglandin D2, which participates in various physiological processes, including inflammation, allergic reactions, and sleep regulation. Inhibitors of HPGDS have...

  • Article
  • Open Access
2 Citations
4,295 Views
16 Pages

The Mutagenic Plasticity of the Cholera Toxin B-Subunit Surface Residues: Stability and Affinity

  • Cheuk W. Au,
  • Iain Manfield,
  • Michael E. Webb,
  • Emanuele Paci,
  • W. Bruce Turnbull and
  • James F. Ross

4 March 2024

Mastering selective molecule trafficking across human cell membranes poses a formidable challenge in healthcare biotechnology while offering the prospect of breakthroughs in drug delivery, gene therapy, and diagnostic imaging. The cholera toxin B-sub...

  • Review
  • Open Access
15 Citations
6,485 Views
22 Pages

Mass Spectrometry: A Rosetta Stone to Learn How Fungi Interact and Talk

  • Erika Calla-Quispe,
  • Hammerly Lino Fuentes-Rivera,
  • Pablo Ramírez,
  • Carlos Martel and
  • Alfredo J. Ibañez

20 June 2020

Fungi are a highly diverse group of heterotrophic organisms that play an important role in diverse ecological interactions, many of which are chemically mediated. Fungi have a very versatile metabolism, which allows them to synthesize a large number...

  • Feature Paper
  • Article
  • Open Access
13 Citations
4,881 Views
25 Pages

9 December 2020

The production of crude oil from resource plays has increased enormously over the past decade. In the USA, around 63% of total output in 2019 was from unconventional production. The major unconventional plays in the USA (e.g., Permian Basin, Anadarko...

  • Review
  • Open Access
2 Citations
1,011 Views
27 Pages

23 October 2025

Dielectrophoresis (DEP) has been used for decades to estimate the passive electrical properties of cells. However, the body of work on cell electrophysiology derived from Clausius–Mossotti analysis of DEP-derived data pales to insignificance ag...

  • Article
  • Open Access
7 Citations
4,263 Views
13 Pages

Veratridine Can Bind to a Site at the Mouth of the Channel Pore at Human Cardiac Sodium Channel NaV1.5

  • Alican Gulsevin,
  • Andrew M. Glazer,
  • Tiffany Shields,
  • Brett M. Kroncke,
  • Dan M. Roden and
  • Jens Meiler

17 February 2022

The cardiac sodium ion channel (NaV1.5) is a protein with four domains (DI-DIV), each with six transmembrane segments. Its opening and subsequent inactivation results in the brief rapid influx of Na+ ions resulting in the depolarization of cardiomyoc...

  • Article
  • Open Access
5 Citations
2,665 Views
17 Pages

Computational-Designed Enzyme for β-Tyrosine Production in Lignin Valorization

  • Fei Peng,
  • Habibu Aliyu,
  • André Delavault,
  • Ulrike Engel and
  • Jens Rudat

29 October 2021

Lignin is an underutilized sustainable source of aromatic compounds. To valorize the low-value lignin monomers, we proposed an efficient strategy, involving enzymatic conversion from trans-p-hydroxycinnamic acids to generate valued-added canonical an...

  • Article
  • Open Access
3 Citations
3,046 Views
18 Pages

23 December 2022

MonocotJRLs are Poaceae-specific two-domain proteins that consist of a jacalin-related lectin (JRL) and a dirigent (DIR) domain which participate in multiple developmental processes, including disease resistance. For OsJAC1, a monocotJRL from rice, i...

  • Review
  • Open Access
23 Citations
9,392 Views
24 Pages

This perspective sheds light on the transformative impact of recent computational advancements in the field of protein therapeutics, with a particular focus on the design and development of antibodies. Cutting-edge computational methods have revoluti...

  • Article
  • Open Access
50 Citations
5,516 Views
15 Pages

Diameters and Fluorescence Calibration for Extracellular Vesicle Analyses by Flow Cytometry

  • Pasquale Simeone,
  • Christian Celia,
  • Giuseppina Bologna,
  • Eva Ercolino,
  • Laura Pierdomenico,
  • Felisa Cilurzo,
  • Rossella Grande,
  • Francesca Diomede,
  • Simone Vespa and
  • Paola Lanuti
  • + 10 authors

23 October 2020

Extracellular vesicles (EVs) play a crucial role in the intercellular crosstalk. Mesenchymal stem cell-derived EVs (MSC-EVs), displaying promising therapeutic roles, contribute to the strong rationale for developing EVs as an alternative therapeutic...

  • Article
  • Open Access
5 Citations
3,299 Views
13 Pages

29 January 2021

Coiled coils represent the simplest form of a complex formed between two interacting protein partners. Their extensive study has led to the development of various methods aimed towards the investigation and design of complex forming interactions. Des...

  • Article
  • Open Access
3 Citations
4,016 Views
15 Pages

The global spread of multi- and pan-resistant bacteria has triggered research to identify novel strategies to fight these pathogens, such as antimicrobial peptides and, more recently, bacteriophages. In a proof-of-concept study, we have genetically m...

  • Communication
  • Open Access
7 Citations
5,823 Views
9 Pages

Positive Effect of a New Combination of Antioxidants and Natural Hormone Stimulants for the Treatment of Oligoasthenoteratozoospermia

  • Vincenzo De Leo,
  • Claudia Tosti,
  • Giuseppe Morgante,
  • Rosetta Ponchia,
  • Alice Luddi,
  • Laura Governini and
  • Paola Piomboni

2 April 2022

Oligoasthenoteratozoospermia (OAT) accounts for about 90% of male infertility; in many cases this disorder may be associated with oxidative stress, a condition that decreases the success of fertilization. Therefore, the empirical treatment of male in...

  • Article
  • Open Access
17 Citations
3,346 Views
14 Pages

Impact of COVID-19 Pandemic on Children and Adolescents with Neuropsychiatric Disorders: Emotional/Behavioral Symptoms and Parental Stress

  • Francesca Felicia Operto,
  • Giangennaro Coppola,
  • Valentina Vivenzio,
  • Chiara Scuoppo,
  • Chiara Padovano,
  • Valeria de Simone,
  • Rosetta Rinaldi,
  • Gilda Belfiore,
  • Gianpiero Sica and
  • Grazia Maria Giovanna Pastorino
  • + 7 authors

The objective of our study was to evaluate the impact of the COVID-19 pandemic on the emotional and behavioral symptoms in minors with neuropsychiatric disorders and on parental stress through a standardized neuropsychological assessment, comparing t...

  • Article
  • Open Access
20 Citations
2,893 Views
9 Pages

Transepithelial Iontophoresis-Assisted Cross Linking for Progressive Keratoconus: Up to 7 Years of Follow Up

  • Riccardo Vinciguerra,
  • Emanuela F Legrottaglie,
  • Costanza Tredici,
  • Cosimo Mazzotta,
  • Pietro Rosetta and
  • Paolo Vinciguerra

28 January 2022

Purpose: To report long-term clinical results of transepithelial cross-linking with iontophoresis (I-CXL) for progressive keratoconus (KC). Methods: Nineteen eyes of 19 patients treated with I-CXL for progressive keratoconus were included in this pro...

  • Feature Paper
  • Article
  • Open Access
7 Citations
3,764 Views
9 Pages

12 May 2022

The method of spectroscopic ellipsometry is applied to complex periodic nanomaterials, consisting of shear-ordered polymeric nanosphere composites, with intense resonant structural color. A corresponding multilayer optical quasi-model of the system,...

  • Review
  • Open Access
9 Citations
4,712 Views
26 Pages

Glycaemic Control in Patients Undergoing Percutaneous Coronary Intervention: What Is the Role for the Novel Antidiabetic Agents? A Comprehensive Review of Basic Science and Clinical Data

  • Annunziata Nusca,
  • Francesco Piccirillo,
  • Federico Bernardini,
  • Aurelio De Filippis,
  • Federica Coletti,
  • Fabio Mangiacapra,
  • Elisabetta Ricottini,
  • Rosetta Melfi,
  • Paolo Gallo and
  • Francesco Grigioni
  • + 3 authors

Coronary artery disease (CAD) remains one of the most important causes of morbidity and mortality worldwide, and revascularization through percutaneous coronary interventions (PCI) significantly improves survival. In this setting, poor glycaemic cont...

  • Article
  • Open Access
7 Citations
3,367 Views
12 Pages

Transparent Polymer Opal Thin Films with Intense UV Structural Color

  • Giselle Rosetta,
  • Matthew Gunn,
  • John J. Tomes,
  • Mike Butters,
  • Jens Pieschel,
  • Frank Hartmann,
  • Markus Gallei and
  • Chris E. Finlayson

11 June 2022

We report on shear-ordered polymer photonic crystals demonstrating intense structural color with a photonic bandgap at 270 nm. Our work examines this UV structural color, originating from a low refractive index contrast polymer composite system as a...

  • Article
  • Open Access
11 Citations
4,550 Views
12 Pages

Cellular and Molecular Mechanisms of In Vivo and In Vitro SARS-CoV-2 Infection: A Lesson from Human Sperm

  • Alice Luddi,
  • Francesca Paola Luongo,
  • Filippo Dragoni,
  • Lia Fiaschi,
  • Ilaria Vicenti,
  • Pietro Lupetti,
  • Mariangela Gentile,
  • Eugenio Paccagnini,
  • Alesandro Haxhiu and
  • Paola Piomboni
  • + 3 authors

24 August 2022

Despite the major target of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), the causative agent of COVID-19, being the respiratory system, clinical evidence suggests that the male reproductive system may represent another viral target o...

  • Article
  • Open Access
22 Citations
2,888 Views
11 Pages

Effects of Essential Oil Blends on In Vitro Apparent and Truly Degradable Dry Matter, Efficiency of Microbial Production, Total Short-Chain Fatty Acids and Greenhouse Gas Emissions of Two Dairy Cow Diets

  • Rosetta M. Brice,
  • Peter A. Dele,
  • Kelechi A. Ike,
  • Yasmine A. Shaw,
  • Lydia K. Olagunju,
  • Oluteru E. Orimaye,
  • Kiran Subedi and
  • Uchenna Y. Anele

25 August 2022

The current study evaluated nine essential oil blends (EOBs) for their effects on ruminal in vitro dry matter digestibility (IVDMD), efficiency of microbial production, total short-chain fatty acid concentration (SCFA), total gas, and greenhouse gas...

  • Article
  • Open Access
5 Citations
5,033 Views
13 Pages

An Ensembled Anomaly Detector for Wafer Fault Detection

  • Giuseppe Furnari,
  • Francesco Vattiato,
  • Dario Allegra,
  • Filippo Luigi Maria Milotta,
  • Alessandro Orofino,
  • Rosetta Rizzo,
  • Rosaria Angela De Palo and
  • Filippo Stanco

13 August 2021

The production process of a wafer in the semiconductor industry consists of several phases such as a diffusion and associated defectivity test, parametric test, electrical wafer sort test, assembly and associated defectivity tests, final test, and bu...

  • Review
  • Open Access
8 Citations
5,227 Views
20 Pages

The Fight against COVID-19 on the Multi-Protease Front and Surroundings: Could an Early Therapeutic Approach with Repositioning Drugs Prevent the Disease Severity?

  • Annamaria Vianello,
  • Serena Del Turco,
  • Serena Babboni,
  • Beatrice Silvestrini,
  • Rosetta Ragusa,
  • Chiara Caselli,
  • Luca Melani,
  • Luca Fanucci and
  • Giuseppina Basta

The interaction between the membrane spike (S) protein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and the transmembrane angiotensin-converting enzyme 2 (ACE2) receptor of the human epithelial host cell is the first step of infect...

  • Article
  • Open Access
3 Citations
2,301 Views
15 Pages

Epigenetic Regulation of Cardiac Troponin Genes in Pediatric Patients with Heart Failure Supported by Ventricular Assist Device

  • Rosetta Ragusa,
  • Arianna Di Molfetta,
  • Serena Del Turco,
  • Manuela Cabiati,
  • Silvia Del Ry,
  • Giuseppina Basta,
  • Alberto Mercatanti,
  • Letizia Pitto,
  • Antonio Amodeo and
  • Chiara Caselli
  • + 2 authors

Ventricular Assist Device (VAD) therapy is considered as a part of standard care for end-stage Heart Failure (HF) children unresponsive to medical management, but the potential role of miRNAs in response to VAD therapy on molecular pathways underlyin...

  • Article
  • Open Access
17 Citations
6,597 Views
16 Pages

Childhood maltreatment (CM) may have a long-term effect on emotion regulation. This study aimed to explore the relationship between CM and emotion dysregulation (ED) in a heterogeneous population. Four hundred seventy French-speaking outpatients (N =...

  • Review
  • Open Access
30 Citations
4,133 Views
16 Pages

Invasive Assessment of Coronary Microvascular Function

  • Fabio Mangiacapra,
  • Michele Mattia Viscusi,
  • Giuseppe Verolino,
  • Luca Paolucci,
  • Annunziata Nusca,
  • Rosetta Melfi,
  • Gian Paolo Ussia and
  • Francesco Grigioni

31 December 2021

The critical role of the coronary microvascular compartment and its invasive functional assessment has become apparent in light of the significant proportion of patients presenting signs and symptoms of myocardial ischemia, despite the absence of epi...

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