Search Results (50)

A PhenoCam is a near-surface remote sensing system traditionally used for monitoring phenological changes in diverse landscapes. Although initially developed for forest landscapes, these near-surface remote sensing systems are increasingly being adopted in agricultural settings, with deployment expanding from 106 sites in 2020 to 839 sites by February 2025. However, agricultural applications present unique challenges because of rapid crop development and the need for precise phenological monitoring. Despite the increasing number of PhenoCam sites, clear guidelines are missing on (i) the phenological analysis of images, (ii) the selection of a suitable color vegetation index (CVI), and (iii) the extraction of growth stages. This knowledge gap limits the full potential of PhenoCams in agricultural applications. Therefore, a study was conducted in two soybean (Glycine max L.) fields to formulate image analysis guidelines for PhenoCam images. Weekly visual assessments of soybean phenological stages were compared with PhenoCam images. A total of 15 CVIs were tested for their ability to reproduce the seasonal variation from RGB, HSB, and Lab color spaces. The effects of image acquisition time groups (10:00 $\mathrm{h}$–14:00 $\mathrm{h}$) and object position (ROI locations: far, middle, and near) on selected CVIs were statistically analyzed. Excess green minus excess red (EXGR), color index of vegetation (CIVE), green leaf index (GLI), and normalized green red difference index (NGRDI) were selected based on the least deviation from their loess-smoothed phenological curve at each image acquisition time. For the selected four CVIs, the time groups did not have a significant effect on CVI values, while the object position had significant effects at the reproductive phase. Among the selected CVIs, GLI and EXGR exhibited the least deviation within the image acquisition time and object position groups. Overall, we recommend employing a consistent image acquisition time to ensure sufficient light, capture the largest possible image ROI in the middle region of the field, and apply any of the selected CVIs in order of GLI, EXGR, NGRDI, and CIVE. These results provide a standardized methodology and serve as guidelines for PhenoCam image analysis in agricultural cropping environments. These guidelines can be incorporated into the standard protocol of the PhenoCam network. Full article

Plant phenology is an important driver of inter-annual variability in peatland carbon uptake. However, the use of traditional phenology datasets (e.g., manual surveys, satellite remote sensing) to quantify this link is hampered by their limited spatial and temporal coverage. This study examined the use of phenology cameras (phenocams) and uncrewed aerial vehicles (UAVs) for monitoring phenology in a Scottish temperate peatland. Data were collected at the site over multiple growing seasons using a UAV platform fitted with a multispectral Parrot Sequoia camera. We found that greenness indices calculated using data from both platforms were in strong agreement with each other, and exhibited strong correlations with rates of gross primary production (GPP) at the site. Greenness maps generated with the UAV data were combined with fine-scale vegetation classifications, and highlighted the variable sensitivity of different plant species to dry spells over the study period. While a lack of suitable weather conditions for surveying limited the UAV data temporally, the phenocam provided a near-continuous record of phenology. The latter revealed substantial temporal variability in the relationship between canopy greenness and peatland GPP, which although strong over the growing season as a whole (r_s = 0.88, p < 0.01), was statistically insignificant during the peak growing season. Full article

AmeriFlux is a network of hundreds of sites across the contiguous United States providing tower-based ecosystem-scale carbon dioxide flux measurements at 30 min temporal resolution. While geographically wide-ranging, over its existence the network has suffered from multiple issues including towers regularly ceasing operation for extended periods and a lack of standardization of measurements between sites. In this study, we use machine learning algorithms to predict CO₂ flux measurements at NEON sites (a subset of Ameriflux sites), creating a model to gap-fill measurements when sites are down or replace measurements when they are incorrect. Machine learning algorithms also have the ability to generalize to new sites, potentially even those without a flux tower. We compared the performance of seven machine learning algorithms using 35 environmental drivers and site-specific variables as predictors. We found that Extreme Gradient Boosting (XGBoost) consistently produced the most accurate predictions (Root Mean Squared Error of 1.81 μmolm⁻²s⁻¹, R² of 0.86). The model showed excellent performance testing on sites that are ecologically similar to other sites (the Mid Atlantic, New England, and the Rocky Mountains), but poorer performance at sites with fewer ecological similarities to other sites in the data (Pacific Northwest, Florida, and Puerto Rico). The results show strong potential for machine learning-based models to make more skillful predictions than state-of-the-art process-based models, being able to estimate the multi-year mean carbon balance to within an error ±50 gCm⁻²y⁻¹ for 29 of our 44 test sites. These results have significant implications for being able to accurately predict the carbon flux or gap-fill an extended outage at any AmeriFlux site, and for being able to quantify carbon flux in support of natural climate solutions. Full article

Forest phenology directly reacts to global climate change, potentially regulating greenhouse gas fluxes between ecosystems and the atmosphere. To explore this phenomenon in two plain poplar (Populus spp.) forests in eastern China, we measured CO₂ fluxes and phenology at the canopy scale based on the eddy covariance and PhenoCam technology. From 2019 to 2022, poplars in a high-speed wind site (HWS) experienced shorter maturity durations (108 ± 4.9 days vs. 152 ± 1.2 days) and an earlier date of foliar senescence (day of year: 223.8 ± 2.5 vs. 259.5 ± 0.9) than those in the low-speed wind site (LWS). The annual net CO₂ uptake in the HWS (689.65 ± 105.15 g C·m⁻²·year⁻¹) was approximately 2.4 times higher than that in the LWS (285.65 ± 81.37 g C·m⁻²·year⁻¹). Our results indicate that environmental changes like wind stress alter forest phenology that can dynamically regulate ecosystem respiration and gross primary production. Full article

Savannas are widespread biomes with highly valued ecosystem services. To successfully manage savannas in the future, it is critical to better understand the long-term dynamics of their productivity and phenology. However, accurate large-scale gross primary productivity (GPP) estimation remains challenging because of the high spatial and seasonal variations in savanna GPP. China’s savanna ecosystems constitute only a small part of the world’s savanna ecosystems and are ecologically fragile. However, studies on GPP and phenological changes, while closely related to climate change, remain scarce. Therefore, we simulated savanna ecosystem GPP via a satellite-based vegetation photosynthesis model (VPM) with fine-resolution harmonized Landsat and Sentinel-2 (HLS) imagery and derived savanna phenophases from phenocam images. From 2015 to 2018, we compared the GPP from HLS VPM (GPP_HLS-VPM) simulations and that from Moderate-Resolution Imaging Spectroradiometer (MODIS) VPM simulations (GPP_MODIS-VPM) with GPP estimates from an eddy covariance (EC) flux tower (GPP_EC) in Yuanjiang, China. Moreover, the consistency of the savanna ecosystem GPP was validated for a conventional MODIS product (MOD17A2). This study clearly revealed the potential of the HLS VPM for estimating savanna GPP. Compared with the MODIS VPM, the HLS VPM yielded more accurate GPP estimates with lower root-mean-square errors (RMSEs) and slopes closer to 1:1. Specifically, the annual RMSE values for the HLS VPM were 1.54 (2015), 2.65 (2016), 2.64 (2017), and 1.80 (2018), whereas those for the MODIS VPM were 3.04, 3.10, 2.62, and 2.49, respectively. The HLS VPM slopes were 1.12, 1.80, 1.65, and 1.27, indicating better agreement with the EC data than the MODIS VPM slopes of 2.04, 2.51, 2.14, and 1.54, respectively. Moreover, HLS VPM suitably indicated GPP dynamics during all phenophases, especially during the autumn green-down period. As the first study that simulates GPP involving HLS VPM and compares satellite-based and EC flux observations of the GPP in Chinese savanna ecosystems, our study enables better exploration of the Chinese savanna ecosystem GPP during different phenophases and more effective savanna management and conservation worldwide. Full article

Plant phenology is an important indicator of the impact of climate change on ecosystems. We have continuously monitored vegetation phenology using near-surface remote sensing, i.e., the PhenoCam in a gully region of the Loess Plateau of China from March 2020 to November 2022. In each image, three regions of interest (ROIs) were selected to represent different types of vegetation (scrub, arbor, and grassland), and five vegetation indexes were calculated within each ROI. The results showed that the green chromatic coordinate (GCC), excess green index (ExG), and vegetation contrast index (VCI) all well-captured seasonal changes in vegetation greenness. The PhenoCam captured seasonal trajectories of different vegetation that reflect differences in vegetation growth. Such differences may be influenced by external abiotic environmental factors. We analyzed the nonlinear response of the GCC series to environmental variables with the generalized additive model (GAM). Our results suggested that soil temperature was an important driver affecting plant phenology in the Loess gully region, especially the scrub showed a significant nonlinear response to soil temperature change. Since in situ phenology monitoring experiments of the small-scale on the Loess Plateau are still relatively rare, our work provides a reference for further understanding of vegetation phenological variations and ecosystem functions on the Loess Plateau. Full article

Our understanding of the impact of climate change on forests is constrained by a lack of long-term phenological monitoring. It is generally carried out via (1) ground observations, (2) satellite-based remote sensing, and (3) near-surface remote sensing (e.g., PhenoCams, unmanned aerial vehicles, etc.). Ground-based observations are limited by space, time, funds, and human observer bias. Satellite-based phenological monitoring does not carry these limitations; however, it is generally associated with larger uncertainties due to atmospheric noise, land cover mixing, and the modifiable area unit problem. In this context, near-surface remote sensing technologies, e.g., PhenoCam, emerge as a promising alternative complementing ground and satellite-based observations. Ground-based phenological observations generally record the following key parameters: leaves (bud stage, mature, abscission), flowers (bud stage, anthesis, abscission), and fruit (bud stage, maturation, and abscission). This review suggests that most of these nine parameters can be recorded using PhenoCam with >90% accuracy. Currently, Phenocameras are situated in the US, Europe, and East Asia, with a stark paucity over Africa, South America, Central, South-East, and South Asia. There is a need to expand PhenoCam monitoring in underrepresented regions, especially in the tropics, to better understand global forest dynamics as well as the impact of global change on forest ecosystems. Here, we spotlight India and discuss the need for a new PhenoCam network covering the diversity of Indian forests and its possible applications in forest management at a local level. Full article

Climatic warming advances the start of the growing season (SOS) and sequentially enhances the vegetation productivity of temperate forests by extending the carbon uptake period and/or increasing the growth rate. Recent research indicates that the vegetation growth rate is a main driver for the interannual changes in vegetation carbon uptake; however, the specific effects of an earlier SOS on vegetation growth rate and the underlying mechanisms are still unclear. Using 268 year-site PhenoCam observations in temperate forests, we found that an earlier SOS reduced the vegetation growth rate and mean air temperature during the green-up period (i.e., from the SOS to the peak of the growing period), but increased the accumulation of shortwave radiation during the green-up period. Interestingly, an earlier-SOS-induced reduction in the growth rate was weakened in the highly humid areas (aridity index ≥ 1) when compared with that in the humid areas (aridity index < 1), suggesting that an earlier-SOS-induced reduction in the growth rate in temperate forests may intensify with the ongoing global warming and aridity in the future. The structural equation model analyses indicated that an earlier-SOS-induced decrease in the temperature and increase in shortwave radiation drove a low vegetation growth rate. Our findings highlight that the productivity of temperate forests may be overestimated if the negative effect of an earlier SOS on the vegetation growth rate is ignored. Full article

The reed belt of Lake Neusiedl, covering half the size of the lake, is subject to massive changes due to the strong decline of the water level over the last several years, especially in 2021. In this study, we investigated the spatial and temporal variations within a long-term ecosystem research (LTER) site in a reed ecosystem at Lake Neusiedl in Austria under intense drought conditions. Spatio-temporal data sets from May to November 2021 were produced to analyze and detect changes in the wetland ecosystem over a single vegetation period. High-resolution orthomosaics processed from RGB imagery taken with an unmanned aerial vehicle (UAV) served as the basis for land cover classification and phenological analysis. An image annotation workflow was developed, and deep learning techniques using semantic image segmentation were applied to map land cover changes. The trained models delivered highly favorable results in terms of the assessed performance metrics. When considering the region between their minima and maxima, the water surface area decreased by 26.9%, the sediment area increased by 23.1%, and the vegetation area increased successively by 10.1% over the investigation period. Phenocam data for lateral phenological monitoring of the vegetation development of Phragmites australis was directly compared with phenological analysis from aerial imagery. This study reveals the enormous dynamics of the reed ecosystem of Lake Neusiedl, and additionally confirms the importance of remote sensing via drone and the strengths of deep learning for wetland classification. Full article

Wetlands are important CO₂ sinks and methane sources, and their seasonality and phenological cycle play an essential role in understanding the carbon budget. However, given the spatial heterogeneity of wetland landscapes and the coarser spatial resolution of satellites, the phenological retrievals of wetlands are challenging. Here we examined the phenology of wetlands from 30 m harmonized Landsat/Sentinel-2 (LandSent30) and 500 m MODIS satellite observations using the ground phenology network PhenoCam as a benchmark. This study used all 11 available wetland PhenoCam sites (about 30 site years), covering diverse wetland types from different climate zones. We found that the LandSent30-based phenology results were in overall higher consistency with the PhenoCam results compared to MODIS, which could be related to the better explanation capacity of LandSent30 data in the heterogeneous landscapes of wetlands. This also means that the LandSent30 has an advantage over the 500 m MODIS regarding wetland vegetation phenological retrievals. It should be noted that the LandSent30 did not show a greatly improved performance, which could be related to the specificity and complexity of the wetlands landscape. We also illustrated the potential effects of the location and observation direction of PhenoCam cameras, the selection of Region of Interest (ROI), as well as the landscape composition of the site. Overall, this study highlights the complexity of wetland phenology from both ground and remote sensing observations at different scales, which paves the road for understanding the role of wetlands in global climate change and provides a basis for understanding the real phenological changes of wetland surfaces. Full article

Deciduous broadleaf forests (DBF) are an extremely widespread vegetation type in the global ecosystem and an indicator of global environmental change; thus, they require accurate phenological monitoring. However, there is still a lack of systematic understanding of the sensitivity of phenological retrievals for DBF in terms of different spatial resolution data and proxy indices. In this study, 79 globally distributed DBF PhenoCam Network sites (total 314 site-years, 2013–2018) were used as the reference data (based on green chromaticity coordinates, GCC). Different spatial resolutions (30 m Landsat and Sentinel-2 data, and 500 m MCD43A4 data) and satellite remote sensing vegetation indices (normalized difference vegetation index, NDVI; enhanced vegetation index, EVI; and near-infrared reflectance of vegetation, NIR_V) were compared to find the most suitable data and indices for DBF phenological retrievals. The results showed that: (1) for different spatial resolutions, both 30 m Landsat–Sentinel-2 data and 500 m MODIS data accurately captured (R² > 0.8) DBF phenological metrics (i.e., the start of the growing season, SOS, and the end of the growing season, EOS), which are associated with the comparatively homogeneous landscape pattern of DBF; (2) for SOS, the NIRv index was closer to GCC than EVI and NDVI, and it showed a slight advantage over EVI and a significant advantage over NDVI. However, for EOS, NDVI performed best, outperforming EVI and NIRv; and (3) for different phenological metrics, the 30 m data showed a significant advantage for detecting SOS relative to the 500 m data, while the 500 m MCD43A4 outperformed the 30 m data for EOS. This was because of the differences between the wavebands used for GCC and for the satellite remote sensing vegetation indices calculations, as well as the different sensitivity of spatial resolution data to bare soil. This study provides a reference for preferred data and indices for broad scale accurate monitoring of DBF phenology. Full article

Floral phenology as a special indicator of climate change and vegetation dynamics is drawing more attention. The long-term observations of flowering events collected at scattered ground sites have accumulated valuable priority on the understanding of floral phenology, but with insufficient investigation on the spatio-temporal dynamics at regional scale, which is mainly induced by the lack of effective ways to capture the pixel-based flower events from remote sensing images. The existing yellowness indices are constructed for rape (Brassica napus L.) with less suppression to the bright background and dark green vegetation, and further with inadequate consideration on physiological characteristics and the temporal spectral signature of investigated vegetation. In this paper, we examined rape and several other representative vegetation types to determine spectral features of yellow-flower period within the growing season, then selected the visible and near-infrared bands to construct a Novel Yellowness Index (NYI) with an enhancement on the physiological mechanism of plants. The proposed NYI were discussed on the variation of mathematical properties with representative instances, cross-compared with three typical yellowness indices—Ratio Yellowness Index (RYI), Normalized Difference Yellowness Index (NDYI), and Ashourloo Canola Index (ACI) —over various yellow-flowering vegetation species at multiple scales, and validated with ground observations of three available PhenoCam network stations and field phenological observations at Görlitz, Sachsen, and Germany. In addition, we applied NYI to detect the rape field using Sentinel-2 image at Görlitz with typical rape area as a case study. Results show that the proposed NYI exhibits the potential to capture yellow-flowering events with increased sensitivity to the variation of flower density, and reduction of noise introduced by bright background or dark green vegetation of multiple vegetation species at different scales. As the flower density increases from 33% to 78%, the relative differences of NYI captured can reach up to 74%, compared with other three indices which have the relative differences no more than 57%. The cross-comparison indicates NYI performs better with higher consistent with PhenoCam observation and Deutscher Wetterdienst phenological station than other yellowness indices in capturing the variation of yellow flower density. The case study of NYI application in the identification of rape field exhibits good accuracy with the overall accuracy up to 97.5%, the Kappa coefficient of 0.94, and F score of 0.96. Consequently, the satellite-derived yellowness index will be a potential means to investigate the flowering dynamics and planting range of yellow-flowering vegetation such as rape. Full article

Satellite-retrieved land surface phenology (LSP) is a first-order control on terrestrial ecosystem productivity, which is critical for monitoring the ecological environment and human and social sustainable development. However, mapping large-scale LSP at a 30 m resolution remains challenging due to the lack of dense time series images with a fine resolution and the difficulty in processing large volumes of data. In this paper, we proposed a framework to extract fine-resolution LSP across the conterminous United States using the supercomputer Tianhe-2. The proposed framework comprised two steps: (1) generation of the dense two-band enhanced vegetation index (EVI2) time series with a fine resolution via the spatiotemporal fusion of MODIS and Landsat images using ESTARFM, and (2) extraction of the long-term and fine-resolution LSP using the fused EVI2 dataset. We obtained six methods (i.e., AT, FOD, SOD, RCR, TOD and CCR) of fine-resolution LSP with the proposed framework, and evaluated its performance at both the site and regional scales. Comparing with PhenoCam-observed phenology, the start of season (SOS) derived from the fusion data using six methods of AT, FOD, SOD, RCR, TOD and CCR obtained r values of 0.43, 0.44, 0.41, 0.29, 0.46 and 0.52, respectively, and RMSE values of 30.9, 28.9, 32.2, 37.9, 37.8 and 33.2, respectively. The satellite-retrieved end of season (EOS) using six methods of AT, FOD, SOD, RCR, TOD and CCR obtained r values of 0.68, 0.58, 0.68, 0.73, 0.65 and 0.56, respectively, and RMSE values of 51.1, 53.6, 50.5, 44.9, 51.8 and 54.6, respectively. Comparing with the MCD12Q2 phenology, the satellite-retrieved 30 m fine-resolution LSP of the proposed framework can obtain more information on the land surface, such as rivers, ridges and valleys, which is valuable for phenology-related studies. The proposed framework can yield robust fine-resolution LSP at a large-scale, and the results have great potential for application into studies addressing problems in the ecological environmental at a large scale. Full article

Dryland ecosystems are critical in regulating the interannual variability of the global terrestrial carbon cycle. The responses of such ecosystems to weather and environmental conditions remain important factors that limit the accurate projections of carbon balance under future climate change. Here, we investigated how shifts in vegetation phenology resulting from changes in weather and environmental conditions influenced ecosystem carbon cycling in one semiarid ecosystem in the Hanford area of central Washington, United States. We examined two years of measurements of the phenology camera, eddy covariance, and soil chamber from an upland semiarid sagebrush ecosystem. Both years had contrasting diel and seasonal patterns of CO${}_2$ fluxes, primarily driven by differences in vegetation phenology. The net ecosystem exchange of CO${}_2$ (NEE) and evapotranspiration (ET) in 2019 were enlarged by shifted vegetation phenology, as a cold and snow-covered winter and warm and dry winter in 2020 resulted in constrained magnitudes of NEE and ET during the summer months. The annual gross primary productivity (GPP) was much higher in 2019 than in 2020 (−211 vs. −112 gC m${}^{-2}$), whereas ecosystem respiration was comparable in these two years (164 vs. 144 gC m${}^{-2}$). Thus, the annual NEE in 2019 was negative (−47 gC m${}^{-2}$) with the sagebrush ecosystem functioning as a carbon sink, while the positive annual NEE in 2020 indicated that the sagebrush ecosystem functioned as a carbon source. Our results demonstrate that winter snowpack can be a critical driver of annual carbon uptake in semiarid sagebrush ecosystems. Full article

Stormwater management is of great importance in large shrinking cities with aging and outdated infrastructure. Maintenance of vegetated areas, particularly referred to as green infrastructure, is often aimed at mitigating flooding and the urban heat island effect by stormwater storage and evaporative cooling, respectively. This approach has been applied in large cities as a cost-effective and eco-friendly solution. However, the ecohydrological processes and how the ecohydrology influences the function of green infrastructure and its potential to provide those ecosystem services are not well understood. In this study, continuous field measurements including air temperature, stomatal conductance, and phenocam images were taken in a 308 m² bioswale retrofitted into a 4063 m² parking lot on the Wayne State University campus in Detroit, Michigan over a two-year period. Our results suggest that plant characteristics such as water use efficiency impact the ecohydrological processes within bioswales and that retrofitted bioswales will need to be adapted over time to meet environmental demands to allow for full and sustained success. Therefore, projected shifts in precipitation regime change are expected to affect the performance of green infrastructure, and each bioswale needs to be developed and engineered to be able to adapt to changing rainfall patterns. Full article