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20 Results Found

  • Article
  • Open Access
25 Citations
4,327 Views
20 Pages

Potential Prognostic Biomarkers of OSBPL Family Genes in Patients with Pancreatic Ductal Adenocarcinoma

  • Cheng-Wei Chou,
  • Yu-Hsiu Hsieh,
  • Su-Chi Ku,
  • Wan-Jou Shen,
  • Gangga Anuraga,
  • Hoang Dang Khoa Ta,
  • Kuen-Haur Lee,
  • Yu-Cheng Lee,
  • Cheng-Hsien Lin and
  • Wei-Jan Wang
  • + 1 author

Pancreatic ductal adenocarcinoma (PDAC) is a highly fatal malignancy with poor survival outcomes. In addition, oxysterol-binding protein-like (OSBPL) family members are reported to be involved in lipid binding and transport and play critical roles in...

  • Review
  • Open Access
27 Citations
7,953 Views
14 Pages

5 November 2013

Oxysterol-binding protein (OSBP) and its homologs designated OSBP-related (ORP) or OSBP-like (OSBPL) proteins constitute a conserved family of lipid binding/transfer proteins (LTP) in eukaryotes. The mechanisms of ORP function have remained incomplet...

  • Article
  • Open Access
11 Citations
3,805 Views
16 Pages

Downregulation of ORP3 Correlates with Reduced Survival of Colon Cancer Patients with Advanced Nodal Metastasis and of Female Patients with Grade 3 Colon Cancer

  • Pengfei Xu,
  • Julia Richter,
  • Annette Blatz,
  • Fabian Gärtner,
  • Roland Alberts,
  • Anca Azoitei,
  • Wycliffe Arika Makori,
  • Sabine Meessen,
  • Uwe Knippschild and
  • Cagatay Günes

16 August 2020

Genome instability is an essential hallmark in tumor development, including colorectal cancer. We have recently identified the oxysterol binding protein-related protein 3 (ORP3), also known as oxysterol binding protein-like 3 (OSBPL3), as a novel plo...

  • Article
  • Open Access
30 Citations
8,082 Views
22 Pages

Much remains to be discovered about the intersection of tissue-specific transcription control and the epigenetics of skeletal muscle (SkM), a very complex and dynamic organ. From four gene families, Leucine-Rich Repeat Containing (LRRC), Oxysterol Bi...

  • Review
  • Open Access
23 Citations
8,117 Views
17 Pages

18 June 2020

Oxysterol binding related proteins 5 and 8 (ORP5 and ORP8) are two close homologs of the larger oxysterol binding protein (OSBP) family of sterol sensors and lipid transfer proteins (LTP). Early studies indicated these transmembrane proteins, anchore...

  • Article
  • Open Access
2 Citations
1,779 Views
20 Pages

Identification of Key Biomarkers Related to Lipid Metabolism in Acute Pancreatitis and Their Regulatory Mechanisms Based on Bioinformatics and Machine Learning

  • Liang Zhang,
  • Yujie Jiang,
  • Taojun Jin,
  • Mingxian Zheng,
  • Yixuan Yap,
  • Xuanyang Min,
  • Jiayue Chen,
  • Lin Yuan,
  • Feng He and
  • Bingduo Zhou

Background: Acute pancreatitis (AP) is characterized by the abnormal activation of pancreatic enzymes due to various causes, leading to local pancreatic inflammation. This can trigger systemic inflammatory response syndrome and multi-organ dysfunctio...

  • Article
  • Open Access
18 Citations
4,713 Views
12 Pages

Identifying Selection Signatures for Backfat Thickness in Yorkshire Pigs Highlights New Regions Affecting Fat Metabolism

  • Haoran Ma,
  • Saixian Zhang,
  • Kaili Zhang,
  • Huiwen Zhan,
  • Xia Peng,
  • Shengsong Xie,
  • Xinyun Li,
  • Shuhong Zhao and
  • Yunlong Ma

28 March 2019

Identifying the genetic basis of improvement in pigs contributes to our understanding of the role of artificial selection in shaping the genome. Here we employed the Cross Population Extended Haplotype Homozogysity (XPEHH) and the Wright’s fixa...

  • Article
  • Open Access
6 Citations
3,273 Views
14 Pages

Identification of Candidate Genes Associated with Yak Body Size Using a Genome-Wide Association Study and Multiple Populations of Information

  • Xinrui Liu,
  • Mingxiu Wang,
  • Jie Qin,
  • Yaxin Liu,
  • Zhixin Chai,
  • Wei Peng,
  • Yixi Kangzhu,
  • Jincheng Zhong and
  • Jiabo Wang

26 April 2023

Yaks have evolved several breeds or genetic resources owing to their geographical and ecological environment, and investigating the genetic construction of body size among breeds is key for breeding. Here, a genome-wide association study (GWAS) was p...

  • Review
  • Open Access
7 Citations
5,103 Views
20 Pages

Progress in Precision Medicine for Head and Neck Cancer

  • Sanaz Vakili,
  • Amir Barzegar Behrooz,
  • Rachel Whichelo,
  • Alexandra Fernandes,
  • Abdul-Hamid Emwas,
  • Mariusz Jaremko,
  • Jarosław Markowski,
  • Marek J. Los,
  • Saeid Ghavami and
  • Rui Vitorino

4 November 2024

This paper presents a comprehensive comparative analysis of biomarkers for head and neck cancer (HNC), a prevalent but molecularly diverse malignancy. We detail the roles of key proteins and genes in tumourigenesis and progression, emphasizing their...

  • Article
  • Open Access
3 Citations
2,670 Views
13 Pages

Searching for the Molecular Basis of Partial Deafness

  • Dominika Oziębło,
  • Natalia Bałdyga,
  • Marcin L. Leja,
  • Henryk Skarżyński and
  • Monika Ołdak

Hearing is an important human sense for communicating and connecting with others. Partial deafness (PD) is a common hearing problem, in which there is a down-sloping audiogram. In this study, we apply a practical system for classifying PD patients, u...

  • Article
  • Open Access
3 Citations
5,113 Views
11 Pages

A Multigene Signature Associated with Progression-Free Survival after Treatment for IDH Mutant and 1p/19q Codeleted Oligodendrogliomas

  • Julia Gilhodes,
  • Adèle Meola,
  • Bastien Cabarrou,
  • Guillaume Peyraga,
  • Caroline Dehais,
  • Dominique Figarella-Branger,
  • François Ducray,
  • Claude-Alain Maurage,
  • Delphine Loussouarn and
  • POLA Network
  • + 2 authors

6 June 2023

Background. IDH mutant and 1p/19q codeleted oligodendrogliomas are the gliomas associated with the best prognosis. However, despite their sensitivity to treatment, patient survival remains heterogeneous. We aimed to identify gene expressions associat...

  • Article
  • Open Access
3 Citations
2,271 Views
11 Pages

Microarray Analysis for Transcriptomic Profiling of Myocardium in Patients with Fatal Myocardial Infarction

  • Vyacheslav Ryabov,
  • Aleksandra Gombozhapova,
  • Nikolai Litviakov,
  • Marina Ibragimova,
  • Matvey Tsyganov,
  • Yulia Rogovskaya and
  • Julia Kzhyshkowska

13 December 2023

Transcriptomic evidence from human myocardium in myocardial infarction (MI) is still not sufficient. Thus, there is a need for studies on human cardiac samples in relation to the clinical data of patients. The purpose of our pilot study was to invest...

  • Article
  • Open Access
1,446 Views
17 Pages

Multiomics Integration of Parkinson’s Disease Datasets Reveals Unexpected Roles of IRE1 in Its Pathology

  • Bianka Alexandra Pasat,
  • Matthieu Moncan,
  • Eleftherios Pilalis,
  • Afshin Samali,
  • Aristotelis Chatziioannou and
  • Adrienne M. Gorman

Parkinson’s disease (PD) is the second most common neurodegenerative disease. It primarily affects the motor system but is also associated with a range of cognitive impairments that can manifest early in disease progression, indicating its mult...

  • Article
  • Open Access
5 Citations
4,485 Views
15 Pages

Hypercholesterolemia in the Malaysian Cohort Participants: Genetic and Non-Genetic Risk Factors

  • Nor Azian Abdul Murad,
  • Yusuf Mohammad Noor,
  • Zam Zureena Mohd. Rani,
  • Siti Aishah Sulaiman,
  • Yock Ping Chow,
  • Noraidatulakma Abdullah,
  • Norfazilah Ahmad,
  • Norliza Ismail,
  • Nazihah Abdul Jalal and
  • Rahman Jamal
  • + 2 authors

15 March 2023

Hypercholesterolemia was prevalent in 44.9% of The Malaysian Cohort participants, of which 51% were Malay. This study aimed to identify the variants involved in hypercholesterolemia among Malays and to determine the association between genetic and no...

  • Article
  • Open Access
9 Citations
5,412 Views
18 Pages

Inter-Species Host Gene Expression Differences in Response to Human and Avian Influenza A Virus Strains

  • Biruhalem Taye,
  • Dawn Yeo,
  • Raphael Tze Chuen Lee,
  • Boon Huan Tan,
  • Richard J. Sugrue and
  • Sebastian Maurer-Stroh

1 November 2017

Low pathogenic avian influenza (LPAI) viruses are a source of sporadic human infections and could also contribute to future pandemic outbreaks but little is known about inter-species differences in the host responses to these viruses. Here, we studie...

  • Article
  • Open Access
1 Citations
1,836 Views
18 Pages

Genome-Wide Association Study for Belly Traits in Canadian Commercial Crossbred Pigs

  • Zohre Mozduri,
  • Graham Plastow,
  • Jack Dekkers,
  • Kerry Houlahan,
  • Robert Kemp and
  • Manuel Juárez

29 April 2025

The improvement of carcass traits is a key focus in pig genetic breeding programs. To identify quantitative trait loci (QTLs) and genes linked to key carcass traits, we conducted a genome-wide association study (GWAS) using whole-genome sequencing da...

  • Feature Paper
  • Article
  • Open Access
10 Citations
6,823 Views
18 Pages

Pan-Cancer Analysis Identifies Tumor Cell Surface Targets for CAR-T Cell Therapies and Antibody Drug Conjugates

  • Xinhui Li,
  • Jian Zhou,
  • Weiwen Zhang,
  • Wenhua You,
  • Jun Wang,
  • Linlin Zhou,
  • Lei Liu,
  • Wei-Wei Chen and
  • Hanjie Li

18 November 2022

Tumor cells can be recognized through tumor surface antigens by immune cells and antibodies, which therefore can be used as drug targets for chimeric antigen receptor-T (CAR-T) therapies and antibody drug conjugates (ADCs). In this study, we aimed to...

  • Article
  • Open Access
5 Citations
3,319 Views
21 Pages

Cell-free extrachromosomal circular DNA (cf-eccDNA) has been proposed as a promising early biomarker for disease diagnosis, progression and drug response. Its established biomarker features are changes in the number and length distribution of cf-eccD...

  • Article
  • Open Access
3 Citations
3,018 Views
16 Pages

Transcriptome in Liver of Periparturient Dairy Cows Differs between Supplementation of Rumen-Protected Niacin and Rumen-Protected Nicotinamide

  • Yuanjie Zhang,
  • Rongrong Li,
  • Xue’er Du,
  • Zhijie Cui,
  • Xingwei Jiang,
  • Lamei Wang,
  • Junhu Yao,
  • Shimin Liu,
  • Jianguo Wang and
  • Yangchun Cao
  • + 1 author

To investigate the difference between rumen-protected niacin (RPN) and rumen-protected nicotinamide (RPM) in the transcriptome of genes relating to the lipid metabolism of the liver of periparturient dairy cows, 10 healthy Chinese Holstein cows were...

  • Article
  • Open Access
8 Citations
3,633 Views
19 Pages

Leonurine Inhibits Hepatic Lipid Synthesis to Ameliorate NAFLD via the ADRA1a/AMPK/SCD1 Axis

  • Wen Fan,
  • Maoxing Pan,
  • Chuiyang Zheng,
  • Haiyan Shen,
  • Dajin Pi,
  • Qingliang Song,
  • Zheng Liang,
  • Jianwei Zhen,
  • Jinyue Pan and
  • Yupei Zhang
  • + 2 authors

9 October 2024

Leonurine is a natural product unique to the Lamiaceae plant Leonurus japonicus Houtt., and it has attracted attention due to its anti-oxidative stress, anti-apoptosis, anti-fibrosis, and metabolic regulation properties. Also, it plays an important r...