Search Results (77)

Chlorophyll-a (Chla) and suspended particulate matter (SPM) are key indicators of water quality, playing critical roles in understanding marine biogeochemical processes and ecosystem health. Although satellite data from the Chinese Ocean Color and Temperature Scanner (COCTS) onboard the Haiyang-1C/D satellites is freely available, there has been limited validation of its standard Chla and SPM products. This study is a first step to address this gap by evaluating COCTS-derived Chla and SPM products against in situ measurements in French coastal waters. The matchup analysis showed robust performance for the Chla product, with a median symmetric accuracy (MSA) of 50.46% over a dynamic range of 0.13–4.31 mg·m⁻³ (n = 24, Bias = 41.11%, Slope = 0.93). In contrast, the SPM product showed significant limitations, particularly in turbid waters, despite a reasonable performance in the matchup exercise, with an MSA of 45.86% within a range of 0.18–10.52 g·m⁻³ (n = 23, Bias = −14.59%, Slope = 2.29). A comparison with another SPM model and Moderate Resolution Imaging Spectroradiometer (MODIS) products showed that the COCTS standard algorithm tends to overestimate SPM and suggests that the issue does not originate from the input radiometric data. This study provides the first regional assessment of COCTS Chla and SPM products in European coastal waters. The findings highlight the need for algorithm refinement to improve the reliability of COCTS SPM products, while the Chla product demonstrates suitability for water quality monitoring in low to moderate Chla concentrations. Future studies should focus on the validation of COCTS ocean color products in more diverse waters. Full article

Psychological distress and gut dysbiosis play key roles in IBD. This study investigated whether specific psychopathological and gut microbiota features predict adverse outcomes in UC patients. This retrospective cohort study included 35 UC patients recruited in 2019. Baseline assessments involved clinical interviews, psychiatric evaluations, and stool sampling. In 2024, follow-up interviews and medical record reviews assessed disease progression, including biologic therapy failure, hospitalization, surgery, and diagnosis changes. Disease activity was measured via the Mayo score. Psychological testing included MMPI-2, STAI-Y2, GSES, CD-RISC, and TAS-20. Patients with biological therapy failure showed increased levels of Proteobacteria, Fusobacteria, Enterobacteriaceae, and Trabulsiella, while Firmicutes were less abundant. UC-related hospitalized patients had lower levels of Rikenellaceae, Ruminococcaceae, Faecalibacterium, Lachnospira, Methanobrevibacter, and Phascolarctobacterium compared to non-hospitalized patients. Hospitalized patients scored higher on the Sc clinical scale and the OBS and HEA content scales. Acidaminococcus and Bilophila were more abundant in patients who underwent surgery. PCA revealed differences between patients with and without biological failure. Logistic regression found that Fusobacteria were negatively correlated with the failure of three or more biologics, while Hy and Pd were positively correlated. Pa and Pt were negatively correlated with multifailure. Obsessiveness, health concerns, somatization, and reduced SCFA-producing bacteria may predict UC-related adverse outcomes. Full article

Currently, the management of Parkinson’s disease (PD), the second most common neurodegenerative disease, is challenging due to the lack of consensus on blood biomarkers for diagnostic, prognostic, and outcome purposes. The identification of specific and sensitive biomarkers could contribute to an early diagnosis and, consequently, facilitate management and improve prognosis. Several molecules are emerging as potential biomarkers, although current data seem preliminary and need further validation. Further, their combination in a panel seems to strengthen their diagnostic power, allowing them to identify PD cases with greater specificity and sensitivity. In this study, we evaluated the association of a panel of molecules, including shed syndecans, ELA peptides, CD141, VEGF, BDNF, and systemic inflammatory indices, in 30 PD cases and 30 matched healthy controls. Significant differences in the systemic levels of all the molecules studied were detected in the PD group when compared to the healthy participants. Univariate and multivariate regression analyses, as well as correlations with clinical indicators, including PD severity expressed by the Hoehn and Yahr (H&Y) scale, highlighted the key role of the studied molecules as independent risk factors. Finally, the use of receiver operating characteristic (ROC) curves demonstrated the diagnostic value of hs-CRP, NLR, BDNF, shed syndecans (1–3), and ELA-32 in PD. Interestingly, their diagnostic performance significantly improved when combined in a panel. Overall, our results suggest that hs-CRP, NLR, BDNF, shed syndecans (1–3), and ELA-32 are significantly associated with PD and could likely serve as appropriate diagnostic and prognostic biomarkers, especially if combined in a panel. Full article

Strawberry fruits accumulate nutritionally critical anthocyanins and phytochemicals through light=quality-dependent metabolic regulation. This review systematically examines spectral modulation strategies for enhancing anthocyanin biosynthesis and fruit quality parameters. We demonstrate that dual red (660 nm) and blue (450 nm) irradiation optimally activates the flavonoid pathway, co-upregulating structural genes (CHS, F3H, DFR, ANS) and regulatory factors (FaMYB10, FaHY5). Mechanistic analyses reveal that blue light preferentially induces upstream phenylpropanoid enzymes (PAL, C4H, CHI), while red light enhances proanthocyanidin production through differential induction of LAR and ANR. Strategic supplementation with UV-C (254 nm, 1–2 kJ/m²/d) and far-red (730 nm, 15 μmol·m⁻²·s⁻¹) improves anthocyanin spatial distribution via stress-mediated epidermal accumulation. Spectral optimization further coordinates flavor development by (1) balancing sucrose–hexose ratios through FaSPS1 modulation, (2) reducing organic acid content via FaMYB44.2 suppression, and (3) amplifying volatile esters (e.g., methyl anthranilate) through SAAT induction. Postharvest UV-C treatment (4 kJ/m²) extends shelf life by 30–35% through microbial inhibition and antioxidant system activation. Practical implementation frameworks propose phase-specific LED protocols related to vegetative growth (R:B = 3:1), flowering (R:B = 1:1), and maturation (R:B = 4:1) stages integrated with environmental sensors in controlled agriculture systems. These findings establish an actionable paradigm for photonic crop management, synergizing molecular precision with commercial horticultural operations to achieve sustainable yield enhancement (projected 22–28% increase) and nutraceutical enrichment. Full article

The deployment of the HY-2B/2C/2D satellite constellation marks a significant advancement in China’s marine dynamic environmental satellite program, forming a robust three-satellite network. All satellites are equipped with the “HY2_Receiver”, an indigenous technological achievement. Precise orbit determination using this receiver is critical for monitoring dynamic oceanic parameters such as sea surface wind fields and heights. This study presents a detailed analysis and comparison of the GPS data quality from the HY-2B/2C/2D satellites, emphasizing the impact of phase center variation (PCV) model corrections on orbit accuracy, with a particular focus on high-precision reduced-dynamic orbit determination. The experimental results demonstrate that the GPS data from the satellites exhibit consistent satellite visibility and minimal multipath errors, confirming the reliability and stability of the receivers. Incorporating PCV model corrections significantly enhances orbit accuracy, achieving improvements of approximately 0.3 cm. Compared to DORIS-derived orbits from the Centre National d’Études Spatiales (CNES), the GPS-derived reduced-dynamic orbits consistently reach radial accuracies of 1.5 cm and three-dimensional accuracies of 3 cm. Furthermore, validation using Satellite Laser Ranging (SLR) data confirms orbit accuracies better than 3.5 cm, with 3D root mean square (RMS) accuracies exceeding 3 cm in the radial (R), along-track (T), and cross-track (N) directions. Notably, the orbit determination accuracy remains consistent across all satellites within the HY-2B/2C/2D constellation. This comprehensive analysis highlights the consistent and reliable performance of the indigenous “HY2_Receiver” in supporting high-precision orbit determination for the HY-2B/2C/2D constellation, demonstrating its capability to meet the rigorous demands of marine dynamic environmental monitoring. Full article

The vast majority of breast cancer patients require radiotherapy but some of them will develop local recurrences and potentially metastases in the future. Recent data show that exosomal cargo is essential in these processes. Thus, we investigated the influence of ionising radiation on exosome properties and their ability to modify the sensitivity and biology of non-irradiated cells. Exosomes were isolated from breast cancer cell lines (MDA-MB-231, MCF7, and SKBR3) irradiated with 2 Gy (Exo 2 Gy) or no irradiation (Exo 0 Gy). Despite some differences in their molecular profiles, they did not affect cell viability, proliferation, cell cycle phase distribution, and radioresistance; however, both populations showed the ability to modify cell migration and invasion potential, as confirmed by the downregulation of β-catenin, which is responsible for maintaining the epithelial phenotype. Interestingly, exosomes from irradiated BCa cells were more actively deposited in the endothelial cells (EA.hy926). Furthermore, exosomes tend to lower the expression of CD31, which is responsible for maintaining intact vascularity. This preliminary study demonstrates the vital role of exosomes and their altered profile due to irradiation in the pathobiology of breast cancer. Full article

From the 1950s to the present, the main tool for obtaining fungal industrial producers of secondary metabolites remains the so-called classical strain improvement (CSI) methods associated with multi-round random mutagenesis and screening for the level of target products. As a result of the application of such techniques, the yield of target secondary metabolites in high-yielding (HY) strains was increased hundreds of times compared to the wild-type (WT) parental strains. However, the events that occur at the molecular level during CSI programs are still unknown. In this paper, an attempt was made to identify characteristic changes at the genome level that occurred during CSI of the Acremonium chrysogenum WT strain (ATCC 11550) and led to the creation of the A. chrysogenum HY strain (RNCM F-4081D), which produces 200–300 times more cephalosporin C, the starting substance for obtaining cephalosporin antibiotics of the 1st–5th generations. We identified 3730 mutational changes, 56 of which led to significant disturbances in protein synthesis and concern: (i) enzymes of primary and secondary metabolism; (ii) transporters, including MDR; (iii) regulators, including cell cycle and chromatin remodeling; (iv) other processes. There was also a focus on mutations occurring in the biosynthetic gene clusters (BGCs) of the HY strain; polyketide synthases were found to be hot spots for mutagenesis. The obtained data open up the possibility not only for understanding the molecular basis for the increase in cephalosporin C production in A. chrysogenum HY, but also show the universal events that occur when improving mold strains for the production of secondary metabolites by classical methods. Full article

Sorghum distillers grains (SDGs) produced from a sorghum liquor company were used for generating biohydrogen via dark fermentation at pH 4.5–6.5 and 55 °C with a batch test, and the biohydrogen electricity generation potential was evaluated. The experimental results show that pH markedly affects hydrogen concentration, hydrogen production rate (HPR) and hydrogen yield (HY), in that high acidic pH values result in high values. The HPR and HY ranged from 0.76 to 3.2 L/L-d and 21.4 to 62.3 mL/g chemical oxygen demand, respectively. These hydrogen production values were used to evaluate bioelectricity generation using a newly developed gas/liquid-fuel engine. The results show a new and prospective biomass source for biohydrogen production, bioelectricity generation and simultaneously solving the problem of treating SDGs when producing kaoliang liquor. Applications of the experimental results are also discussed. Full article

Background/Objectives: Osteoarthritis (OA) is the most common joint disease in the adult population. OA is the result of multiple mechanisms leading to inflammation and the degradation of the cartilage. A complex series of etiological actors have been identified so far, including extracellular vesicles (EVs). The EV content of the synovial fluid (SF) can release inflammatory mediators that enhance OA progression. An intra-articular viscosupplementation of high-MW hyaluronic acid (HyA) constitutes the first-line conservative treatment for OA. Although attractive for the potential pharmacological implications, the possibility that HyA may interact with EVs in the context of OA has not yet been specifically investigated; therefore, the present study aimed to fill this gap. Methods: We studied the effect of a HyA preparation (a blend of crosslinked and linear polymers, CLHyA) on the relevant inflammatory markers in chondrocytes (HC cells or primary chondrocytes isolated from patients with advanced OA) exposed to the EVs collected from IL-1β-stimulated THP-1 human monocytes (EVs+). Results: EVs+ caused specific inflammatory responses in chondrocytes that could be prevented by coincubation with CLHyA. This anti-inflammatory activity is likely dependent on the direct binding of CLHyA to CD44 receptors highly expressed in EVs+ and on the subsequent hindrance to EVs+ diffusion and docking to target cells. Conclusions: On the whole, the tight interactions identified herein between HMW HyA and EVs+ represent a novel, pharmacologically exploitable mechanism potentially relevant in the context of OA treatment. Full article

This study examined the influence of chlorogenic acid (CGA) on gut antioxidant status, morphology, barrier function, immunity, and cecal microbiota in late-peak laying hens. A total of 240 Hy-Line Brown hens, aged 43 weeks, were randomly assigned to four groups, the basal diet +0, 400, 600, and 800 mg/kg CGA, for 12 weeks. The results revealed that CGA significantly reduced ileal H₂O₂ and malondialdehyde levels; increased duodenal height, ileal villus height, and villus height-to-crypt depth ratio; while decreasing jejunal crypt depth. The 600 and 800 mg/kg CGA significantly upregulated the duodenal, jejunal, and ileal ZO-1 and occludin gene expression; increased IgG levels in serum and ileum; and upregulated ileal IgA gene expression. The 600 mg/kg CGA significantly upregulated CD3D and CD4 gene expression, while downregulating IL-1β gene expression in duodenum, jejunum, and ileum. Moreover, CGA changed the gut microbiota structure. The SCFA-producing bacteria unclassified_f__Peptostreptococcaceae, unclassified_f_Oscillospiraceae, Pseudoflavonifractor, Lachnospiraceae_FCS020_group, Oscillospira, Elusimicrobium, Eubacterium_ventriosum_group, Intestinimonas, and norank_f_Coriobacteriales_Incertae_Sedis were significantly enriched in the 400, 600, and/or 800 mg/kg CGA groups. The bacteria Lactobacillus, Bacillus, and Akkermansia were significantly enriched in the 600 mg/kg CGA group. Conclusively, dietary CGA (600–800 mg/kg) improved intestinal antioxidant status, morphology, barrier and immune function, and beneficial microbiota growth in late-peak laying hens. Full article

Alanyl-glutamine (Aln-Gln), a highly soluble and stable Glutamine-dipeptide, is known to improve the performance of poultry birds. This study aimed to investigate the effect of Aln-Gln during the rearing period on growth performance, nutrient digestibility, digestive enzyme activity, immunity, antioxidant status and relative gene expression of Hy-Line brown hens. A total of 480 healthy day-old Hy-line brown chicks with similar body weights were randomly divided into four dietary groups (8 replicates/group and 15 birds/replicate). Groups A, B, C and D were fed diets containing 0%, 0.1%, 0.2% and 0.3% Aln-Gln, respectively, for 6 weeks. The body weight (BW) and average daily gain (ADG) were higher in hens fed test diets compared with the control (p < 0.05). The feed conversion ratio (FCR) was better in test groups as compared to the control group (p < 0.05). The ADFI showed no significant difference between the groups. Dietary treatments had no effect on dry matter (DM), organic matter (OM) and crude fiber (CF) digestibility. The Aln-Gln also improved gross energy (GE) and crude protein (CP) digestibility (p < 0.05). It has also increased IgG levels in groups C and D. IgM levels were similar to the control in B, C and D. The Aln-Gln increased IL-1 in B and C, IL-2 in C and D, and IL-6 in all test groups (p < 0.05). The supplementation of Aln-Gln had no effect on serum antioxidant indices like CAT, MDA, GSH-PX, GSH, and SOD in 42-day-old growing hens. Aln-Gln supplementation had no significant effect (p > 0.05) on the activity of amylase and lipase, however, a significant improvement (p < 0.05) in the activities of trypsin and chymotrypsin was observed in the test groups. Supplemented Aln-Gln levels in the birds’ diets led to an increase in the expression of genes related to growth factors (IGF-1, IGFBP-5), immune markers (IL-1, IL-2, IL-6) and antioxidant status (GSH-Px1), as compared to control group. Aln-Gln supplementation in Hy-Line brown hens during their growing period improved growth, nutrient digestibility, immunity and digestive enzymes activity. These findings suggest that Aln-Gln is a promising dietary additive for enhancing poultry performance. Full article

Currently, there are no guidelines on housing or recommendations for practical environmental enrichments for chickens used for research and teaching purposes. This study was conducted to identify optimal enrichment programs to improve the health and welfare of caged hens used for teaching and research purposes. The 24-week-old Hy-line Brown laying hens (n = 168) were allocated at random to six enrichment programs/treatments with 14 replicate cages of two birds per cage during a 5-week experiment. Hens had physical access to the following treatments: no enrichment provided (control); round, wooden perches provided (perch); scratch pads made of wood and covered with sandpaper provided (scratch pad); hanging CDs provided (hanging CD); all three enrichment forms provided (complex environment); and each enrichment form provided on a 2-week rotation (novelty). While the egg quality was consistent, the complex group had a significantly lower feed intake (p < 0.001) but similar egg mass; thus, they also had a lower feed conversion ratio (p < 0.001). Additionally, hens in the complex treatment group had the leanest average body weight at week 5 (p < 0.01). It should be noted that while some measures of welfare did show significant differences, the biological or practical difference may be negligible, as in the case of the body condition score in this study. The results show that providing three different forms of environmental enrichment had positive effects on the welfare, health condition, and laying performance of laying hens relative to no enrichment or only one enrichment item. Full article

Phytochrome-interacting factor (PIF) is a subfamily of the basic helix–loop–helix (bHLH) transcription factors (TFs) and plays key roles in plant responses to diverse biotic and abiotic stresses. In this work, a PIF gene named CaPIF7a was cloned and its role in the regulation of pepper’s resistance to Phytophthora capsici infection (PCI) was studied. The cloned CaPIF7a gene has a CDS length of 1383 bp, encodes a hydrophilic protein containing bHLH and APB characteristic domains, and subcellular localization results showed that CaPIF7a was located in the nucleus. Expression analysis showed that CaPIF7a gene has the highest expression level in leaf, and its expression was regulated under PCI and salicylic acid (SA) treatment. Silencing of CaPIF7a in pepper plants by virus-induced gene silencing (VIGS) reduces the resistance of pepper to PCI, with decreased expression of SA-responsive and SA-biosynthesis genes and obviously decreased SA content. DNA affinity purification sequencing (DAP-seq) was employed to identify the potential targets of CaPIF7a, and yeast one-hybrid (Y1H) verified that CaPIF7a could regulate the expression of CaHY5 by binding its promoter. These findings indicated that CaPIF7a might be a key modulator in plant immune response and presented a possible regulatory network of CaPIF7a in PCI. Full article

The aim of this study was to elucidate the effect of FAM13A on the differentiation of goat intramuscular precursor adipocytes and its mechanism of action. Here, we cloned the CDS region 2094 bp of the goat FAM13A gene, encoding a total of 697 amino acid residues. Functionally, overexpression of FAM13A inhibited the differentiation of goat intramuscular adipocytes with a concomitant reduction in lipid droplets, whereas interference with FAM13A expression promoted the differentiation of goat intramuscular adipocytes. To further investigate the mechanism of FAM13A inhibiting adipocyte differentiation, 104 differentially expressed genes were screened by RNA-seq, including 95 up-regulated genes and 9 down-regulated genes. KEGG analysis found that the RIG-I receptor signaling pathway, NOD receptor signaling pathway and toll-like receptor signaling pathway may affect adipogenesis. We selected the RIG-I receptor signaling pathway enriched with more differential genes as a potential adipocyte differentiation signaling pathway for verification. Convincingly, the RIG-I like receptor signaling pathway inhibitor (HY-P1934A) blocked this pathway to save the phenotype observed in intramuscular adipocyte with FAM13A overexpression. Finally, the upstream miRNA of FAM13A was predicted, and the targeted inhibition of miR-21-5p on the expression of FAM13A gene was confirmed. In this study, it was found that FAM13A inhibited the differentiation of goat intramuscular adipocytes through the RIG-I receptor signaling pathway, and the upstream miRNA of FAM13A (miR-21-5p) promoted the differentiation of goat intramuscular adipocytes. This work extends the genetic regulatory network of IMF deposits and provides theoretical support for improving human health and meat quality from the perspective of IMF deposits. Full article

Poly-γ-glutamic acid (γ-PGA) is an attractive biopolymer for medical, agri-food, and environmental applications. Although microbial synthesis by Bacilli fed on waste streams has been widely adopted, the obtainment of efficient sustainable production processes is still under investigation by bioprocess and metabolic engineering approaches. The abundant glycerol-rich waste generated in the biodiesel industry can be used as a carbon source for γ-PGA production. Here, we studied fermentation performance in different engineered Bacillus subtilis strains in glycerol-based media, considering a swrA⁺ degU32^Hy mutant as the initial producer strain and glucose-based media for comparison. Modifications included engineering the biosynthetic pgs operon regulation (replacing its native promoter with P_hyspank), precursor accumulation (sucCD or odhAB deletion), and enhanced glutamate racemization (racE overexpression), predicted as crucial reactions by genome-scale model simulations. All interventions increased productivity in glucose-based media, with P_hyspank-pgs ∆sucCD showing the highest γ-PGA titer (52 g/L). Weaker effects were observed in glycerol-based media: ∆sucCD and P_hyspank-pgs led to slight improvements under low- and high-glutamate conditions, respectively, reaching ~22 g/L γ-PGA (26% increase). No performance decrease was detected by replacing pure glycerol with crude glycerol waste from a biodiesel plant, and by a 30-fold scale-up. These results may be relevant for improving industrial γ-PGA production efficiency and process sustainability using waste feedstock. The performance differences observed between glucose and glycerol media also motivate additional computational and experimental studies to design metabolically optimized strains. Full article