Search Results (121)

This narrative review synthesizes current knowledge on MADS-Box 27 (OsMADS27), a member of the AGL17 clade in rice that has emerged as a regulatory node linking nitrate signaling, root development, and abiotic stress tolerance. Because most functional and mechanistic studies on OsMADS27 to date have been conducted in rice, this review is centered on Oryza sativa, with cross-species comparisons used for evolutionary and comparative context. Specifically, we summarize the gene and protein structure, phylogenetic position, expression profile, upstream and downstream regulation, and emerging functional significance of OsMADS27. OsMADS27 is a typical MIKC-type MADS-box protein with root-preferential expression, and its activity is strongly influenced by nitrate availability and miR444-mediated regulation. Evidence from functional genomics, transcriptomics, ChIP-based studies, and transgenic analyses suggests that OsMADS27 contributes to the regulation of root architecture, nitrate uptake, hormonal crosstalk, and stress-responsive pathways. Notably, OsMADS27 enhances salt tolerance through nitrate-dependent activation of downstream targets such as OsHKT1;1 and OsSPL7, contributing to ion homeostasis and salinity tolerance. Recent findings also suggest roles in grain size regulation and yield improvement, expanding its significance beyond root biology. This review compares OsMADS27 with AGL17-clade genes and highlights its value for crop improvement aimed at salinity tolerance and nitrogen use efficiency. However, important research gaps remain, particularly the limited field-level validation, the absence of integrated multi-omics analyses, and the lack of functional studies of OsMADS27 orthologs in non-rice crops. Overall, OsMADS27 represents promising rice-centered target for future biotechnology applications, while its translational relevance to other cereals remains to be established through orthology analysis and field-level evaluation. Full article

Climate change has intensified the occurrence of combined abiotic stresses such as drought, salinity, heat, and waterlogging, thereby threatening cereal productivity and global food security. Root systems play a central role in plant adaptation to these interacting stresses by regulating water uptake, ion balance, nutrient acquisition, and stress signaling. However, many previous studies have primarily focused on individual stress factors rather than integrated stress environments. This review synthesizes current knowledge regarding root-mediated adaptive mechanisms in cereal crops under combined abiotic stresses, with emphasis on barley (Hordeum vulgare), wheat (Triticum aestivum), and oats (Avena sativa). The review highlights how root system architecture, including root depth, branching density, and aerenchyma formation, contributes to stress resilience under interacting environmental conditions. Physiological and molecular mechanisms involving ion transporters, aquaporins, transcription factors, and auxin-regulated root plasticity are also discussed. In barley, deeper and steeper root systems improve water acquisition under combined drought and heat stress, while wheat genotypes carrying the HKT1;5 allele exhibit enhanced sodium exclusion under drought–salinity interactions. Oats respond to waterlogging and salinity through adventitious root formation and enhanced oxygen transport. Overall, this review emphasizes the importance of root-targeted approaches for improving cereal adaptation under increasingly complex multi-stress environments. Full article

Global warming and associated environmental changes are reducing arable land and intensifying salinization risks, posing growing threats to food security. Soil salinity is an increasing threat to agricultural productivity worldwide, particularly in arid and semi-arid areas. Wheat (Triticum aestivum L.) is one of the most important and widely cultivated cereal crops for human consumption and livestock feed. However, with increasing water scarcity and the incidence of salt-affected lands, wheat productivity is increasingly affected by salinity. Previous studies have investigated salinity tolerance mechanisms mainly at the seedling and reproductive stages of wheat; however, comparatively fewer studies integrate rapid biochemical and physiological responses during the first hours of germination stress exposure together with transcriptional analyses during early seedling establishment, even though this stage is critical for stand establishment. Here, we evaluated early physiological and transcriptional responses of salt-tolerant, moderate, and sensitive wheat cultivars exposed to 0 or 150 mM NaCl during germination and the early seedling stage. Tolerant and sensitive cultivars showed contrasting germination performance under salinity. Physiological analysis showed that salt-tolerant cultivars exhibited higher proline accumulation and higher antioxidant enzyme activities (CAT, SOD, and GR), while maintaining lower MDA levels under salinity compared with sensitive cultivars. Notably, tolerant cultivars showed marked upregulation of TaHKT1;4, TaP5CS, TaMYB, and TaDHN genes associated with ion homeostasis, osmoprotectant metabolism, and stress-responsive regulation. These responses represent integrated early-stage biochemical, physiological, and transcriptional indicators of salinity responsiveness rather than direct predictors of final yield performance. Full article

Soil salinity is a major environmental constraint affecting avocado (Persea americana Mill.) productivity. In this study, we evaluate the physio-morphological and molecular responses of two avocado varieties, drymifolia (sensitive) and americana (tolerant), subjected to increasing NaCl concentrations for 60 days. Our results reveal distinct adaptive strategies. While salinity reduced total biomass in both genotypes, var. americana exhibited superior resilience, characterized by preferential biomass allocation to the root system. Ion analysis demonstrated that tolerance was not mediated by K⁺ homeostasis, but rather by the differential management of toxic ions. var. americana effectively sequestered chloride Cl⁻ in the roots, whereas var. drymifolia exhibited a breakdown of the exclusion mechanism at 60 mM NaCl, with shoot Cl⁻ concentrations exceeding those of the root, leading to severe toxicity. At the molecular level, qPCR analysis of the Na⁺ transporters PaHKT1 and PaSOS1 showed no expression pattern correlated with salt stress. Bioinformatic assessment revealed significant structural divergences and a lack of conserved functional domains in these proteins. These findings challenge the applicability of the classical sodium-exclusion model (typical of Liliopsida and Magnoliopsida) to avocado. We conclude that salt tolerance in this Lauraceae species is primarily driven by root-mediated Cl⁻ exclusion rather than canonical Na⁺ transport pathways. Full article

Clinically robust molecular biomarkers for depression have remained elusive, despite extensive transcriptomic research. This gap is consequential: depression is prevalent and heterogeneous, yet objective measures to quantify burden, stratify patients, and track recovery remain limited. Here, we review evidence that intron retention (IR) can serve as a homeostatic state variable—and therefore a sensitive biomarker—reporting stress adaptation and recovery at an upstream regulatory layer, often preceding or outperforming differential gene expression (DEG) readouts. Mechanistically, IR enables bidirectional fine-tuning of effective gene output: increased IR (IncIR) can throttle output under overload, whereas decreased IR (DecIR) releases this brake to restore gene output. Because these shifts are reversible and treatment-responsive, IR signatures can function not only as disease markers but also as pharmacodynamic metrics for blood-based monitoring of drug response and recovery. To evaluate the clinical utility of IR, we use depression as a proof of concept and focus on two interventions: (i) the Kampo formula hangekobokuto (HKT), which is associated with IR normalization consistent with reduced peripheral inflammatory load; and (ii) ketamine, where IR patterns measured before ketamine treatment in non-responders are linked to stronger innate-immune/antiviral activity, suggesting a higher inflammatory load that may limit treatment benefit. Finally, we discuss transdiagnostic extensions beyond depression, using early cognitive decline (mild cognitive impairment, MCI) as a stringent, biologically distal test case for blood-based IR/DI readouts and motivating independent cohort replication and longitudinal validation. Full article

Salinity stress severely limits rice productivity and grain quality worldwide. Although exogenous foliar application of titanium dioxide nanoparticles (nano-TiO₂) has been reported to enhance crop stress tolerance, its regulatory roles in yield formation and grain quality in rice varieties with differing salt tolerance are not well understood. In the present study, two contrasting rice varieties, viz., Jingliangyou 3261 (JLY3261; salt-tolerant) and Yuxiangyouzhan (YXYZ; salt-sensitive), were applied with five nano-TiO₂ foliar application treatments—viz., CK: water spray; Ti1: 15 mg L⁻¹; Ti2: 30 mg L⁻¹; Ti3: 45 mg L⁻¹; and Ti4: 60 mg L⁻¹—at the jointing and panicle initiation stages. Plants were irrigated with 0.3% saltwater to simulate salt stress. The results showed that Ti2 and Ti3 treatments led to 8.59% and 14.80% increases in grain yield in JLY3261 and YXYZ, respectively, compared with CK. Ti2 and Ti3 treatments significantly increased the leaf area index, net photosynthetic rate, and aboveground biomass of both varieties at the heading stage. Meanwhile, the activities of antioxidant enzymes such as superoxide dismutase and peroxidase, as well as nitrogen metabolism enzymes including nitrate reductase and glutamine synthetase, were improved with a substantial reduction in malondialdehyde contents. Application of nano-TiO₂ upregulated the expression of ion transport-related genes such as OsSOSs, OsNHXs and OsHKTs, thus improving leaf K⁺ accumulation and reducing Na⁺ content to optimize the K⁺/Na⁺ ratio. In addition, Ti2 and Ti3 treatments improved the milled rice rate, head rice rate, and protein content, while they decreased the chalkiness degree of both rice cultivars. Principal component analysis showed that the aboveground biomass at the heading stage was a core evaluation index for both varieties. Overall, foliar application of 30–45 mg L⁻¹ nano-TiO₂ was found to be effective regarding growth and yield improvement in rice under saline conditions. This study provides a theoretical basis for agro-management strategies for rice cultivation in saline–alkaline soils. Full article

Background: Juvenile Idiopathic Arthritis (JIA) is the most prevalent rheumatological disease in childhood. It is classified into seven subtypes, each with specific clinical features. The pathogenesis of JIA involves an increased inflammatory response. Treatment options include pharmacological therapy, patient education, physical therapy, and rehabilitation. Methods: Patients received IAC injections and were subsequently divided into two groups: one group underwent HKT, while the other did not. The effects of HKT were assessed before treatment and one month after the IAC injections and initiation of HKT, using the Child Health Assessment Questionnaire (CHAQ), Visual Analogue Scale (VAS), and the Child Health Questionnaire—Parent Form 50 (CHQ-PF50). Results: Data were analyzed using the t-test. The HKT group showed non-statistically significant improvements in CHAQ and VAS scores compared to the non-HKT group. However, statistically significant differences were observed in the CHQ-PF50, particularly in the self-esteem and pain subscales. Conclusions: Although global differences between groups were not statistically significant, the group that underwent HKT demonstrated better scores, suggesting that HKT may reduce pain and contribute to improved quality of life in children with JIA. Full article

In the context of global climate change, the co-occurrence of salt and heat stress represents a major constraint to rice production, resulting in greater yield penalties than either stress alone. This study aimed to assess the effects of salt and heat stress on oxidative homeostasis, photosynthetic performance, carbon (C)–nitrogen (N) metabolism, and rice yield. The experiment comprised four treatments, i.e., control (CK), salt (irrigation with 3.9 dS m⁻¹ NaCl solution), heat (exposure to 36 °C/30 °C day/night for 5 days at panicle initiation), and combined salt + heat stress. Results showed that combined stress enhanced reactive oxygen species (ROS) accumulation (i.e., H₂O₂ content and O₂⁻ contents were 1.3 and 1.5 times higher than CK), and the activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) were increased by 64.6%, 69.5%, and 74.8% higher than CK. At the molecular level, salt + heat stress upregulated antioxidant defense-related genes, i.e., OsAPX2, OsSODCC1, and OsAPX1, while significantly downregulated ion homeostasis-related genes, i.e., OsSOSs, OsHKT1;3, OsHKT1;5, and OsNHX4, and photosynthesis-related genes, i.e., Ospsbo, OsRbcS2, and OsRbcS3, compared with CK. Furthermore, salt + heat stress reduced the activities of C-metabolism enzymes (sucrose phosphate synthase, sucrose synthase, and starch synthase) and N-metabolism enzymes (nitrate reductase, glutamine synthetase, and glutamate synthase), leading to 34.3% and 18.6% lower stem-sheath non-structural carbohydrate accumulation in stem sheath and its translocation rate, respectively, while total N accumulation decreased by 42.9%, as compared with CK. Ultimately, these cascading effects inhibited panicle development and reduced yield. The findings provide a theoretical basis for improving rice tolerance to combined abiotic stresses by targeting oxidative stress mitigation, photosynthetic protection, and key stress-responsive gene regulation. Full article

Soil salinization, as a key constraint to global agricultural sustainable development, has threatened over one billion hectares of farmland, posing severe challenges to staple crop production. Therefore, this review summarizes important advances in the molecular mechanisms of salt–alkali tolerance from the model plant Arabidopsis thaliana to staple crops (rice, maize, and wheat) and compares the commonalities and differences in physiological structure and molecular regulatory networks among these species. Studies have shown that plants respond to saline–alkali stress mainly through conserved mechanisms, including salt overly sensitive (SOS) signaling pathway-mediated ion homeostasis, accumulation of osmoprotectants, reactive oxygen species (ROS) scavenging, and coordination of multiple hormone signals. However, different species have evolved unique adaptive strategies: Arabidopsis has revealed core regulatory pathways, but its simple root system limits direct application in crops; rice employs root barriers and a stem node “ion filter” to precisely regulate Na⁺ transport; maize utilizes the C4 photosynthetic pathway along with efficient osmotic adjustment and tissue compartmentalization to enhance tolerance; and wheat achieves ion detoxification through TaHKT allele variation and vacuolar sequestration. Looking forward, future breeding for salt–alkali tolerance should adopt a “crop-centric” approach, focusing on the mining and molecular design of superior alleles, combined with gene editing and multi-trait integration, to provide a theoretical basis and strategic support for developing high-yield and stable crop varieties adapted to saline–alkali lands. Full article

OsHKT1;1, a member of the high-affinity K⁺ transporter (HKT) family, plays a key role in Na⁺ homeostasis and salinity tolerance in rice. In our previous study, multiple potential OsHKT1;1 splicing variants were identified, as well as the full-length (FL) OsHKT1;1 transcript from the salt-tolerant rice Pokkali. However, most previous studies focused solely on the full-length protein, leaving the transport functions of splice variants largely unexamined. In this study, we focused on the splice variant OsHKT1;1-V2 and compared its function and gene expression with those of OsHKT1;1-FL. Two-electrode voltage clamp experiments using Xenopus laevis oocytes revealed that the 1st start codon of OsHKT1;1-V2 is functional to exhibit bidirectional currents in bath solutions containing NaCl. Unlike the Na⁺-selective feature of OsHKT1;1-FL, OsHKT1;1-V2 primarily mediated Cl⁻ transport with weak Na⁺ selectivity, which was supported by the higher Cl⁻ accumulation in OsHKT1;1-V2–expressing oocytes. Subcellular localization analyses using oocytes and Arabidopsis mesophyll cells indicated plasma membrane localization of OsHKT1;1-V2, similar to OsHKT1;1-FL. Functional assays using a yeast mutant further indicated that OsHKT1;1-FL, but not OsHKT1;1-V2, mediates Na⁺ uptake. The same OsHKT1;1 variants were identified in the japonica cultivar Nipponbare, and OsHKT1;1-V2 of the cultivar showed Cl⁻ transport properties similar to the one from Pokkali. Quantitative PCR analyses revealed higher abundance of OsHKT1;1-FL transcripts in Nipponbare than in Pokkali with markedly lower OsHKT1;1-V2 levels in Pokkali under salt stress. This study provides a new insight into HKT-mediated ion homeostasis under salinity stress. Full article

Accurate passenger traffic forecasting is vital for strategic planning in Thailand’s aviation industry. This study forecasts the monthly total number of passengers at Suvarnabhumi (BKK), Don Mueang (DMK), Chiang Mai (CNX), and Phuket (HKT) airports using data from 2017 to 2024. The dataset was partitioned into training (January 2017–December 2023) and testing (January–December 2024) sets. Six methods were compared: Single Exponential Smoothing, Holt’s, Holt’s with Events Adjustment, Holt–Winters Multiplicative, TBATS model, and Box–Jenkins. Performance was evaluated using Mean Absolute Percentage Error (MAPE) and Mean Absolute Error (MAE). The results indicate that the optimal forecasting method varies by airport characteristics. Holt’s Method with Events Adjustment, which incorporates major disruptions such as the COVID-19 pandemic, produced the most accurate forecasts for BKK and DMK by effectively capturing external shocks. In contrast, the Holt–Winters Multiplicative method performed best for CNX and HKT, reflecting strong seasonal patterns typically driven by tourism activities in these destinations. Full article

Salt stress represents a significant abiotic factor that constrains maize growth. Epigenetic modifications play a crucial role in enabling plants to respond effectively to such stresses. Among these alterations, m⁶A methylation, which is the most common post-transcriptional modification of eukaryotic mRNA, shows dynamic variations that are closely linked to stress responses. In this study, we conducted a transcriptome-wide m⁶A methylation analysis on maize roots from the inbred line PH4CV, following treatment with 180 mM NaCl. The results identified 1309 differentially m⁶A methylated peaks (DMPs) and 2761 differentially expressed genes (DEGs) under salt stress conditions. Association analysis revealed that 179 DEGs contain DMPs. Key pathways involved in stress responses, including Ca²⁺ signaling transduction and ABA signaling, as well as ion homeostasis regulation (involving AKT, HKT, and other families) and the reactive oxygen species scavenging system (including POD, SOD, and CAT), play crucial roles in coping with salt stress. Furthermore, we identified a total of 26 m⁶A-related genes, comprising 7 eraser genes, 10 reader genes, and 9 writer genes. Notably, several key salt-responsive genes, such as RBOHB, AKT1, HKT1, and POD12, are correlated with m⁶A modification. This study provides a comprehensive map of m⁶A methylation dynamics in maize roots under salt stress, laying a foundational resource for future investigations into the epigenetic regulation of salt tolerance in maize. Full article

Soil salinization poses a significant threat to global agricultural productivity. Among crops, soybean (Glycine max), an important source of oil and protein, is more susceptible to salt stress compared to other major crops such as wheat (Triticum aestivum) and rice (Oryza sativa). To better utilize saline land resources, understanding the mechanisms underlying salt tolerance in soybean is essential for developing new salt-tolerant soybean varieties that contribute to food security. This review synthesizes current knowledge on the molecular mechanisms of salt tolerance in soybean, with a focus on ion homeostasis, osmotic adjustment, oxidative balance restoration, structural adaptations, and transcriptional regulatory networks. Key findings highlight the critical roles of ion transporters—such as GmNHX1, GmSOS1, GmHKT1, and GmCLC1—in maintaining Na⁺/K⁺ and Cl⁻ balance; the accumulation of osmoprotectants like proline and LEA proteins to alleviate osmotic stress; and the activation of antioxidant systems—including SOD, CAT, and APX—to scavenge reactive oxygen species (ROS). Additionally, structural adaptations, such as salt gland-like features observed in wild soybean (Glycine soja), and transcriptional regulation via ABA-dependent and independent pathways (e.g., GmDREB, GmbZIP132, GmNAC) further enhance tolerance. Despite these advances, critical gaps remain regarding Cl⁻ transport mechanisms, rhizosphere microbial interactions, and the genetic basis of natural variation in salt tolerance. Future research should integrate genomic tools, omics-based breeding, genome editing techniques such as CRISPR-Cas9, microbial technologies, and traditional breeding methods to develop salt-tolerant soybean varieties, providing sustainable solutions for the utilization of saline–alkali soils and enhancing global food security. Full article

Soil salinity is a serious abiotic stressor threatening global agriculture, currently affecting nearly 20% of irrigated land, with projections suggesting that almost 50% of cultivated areas may be impacted by 2050. Plant growth-promoting rhizobacteria (PGPR) and Silicon (Si) have been widely investigated for their individual roles in improving plant tolerance to salinity, yet their combined application—particularly using Si nanoparticles (SiNPs), remains underexplored. This review synthesizes current knowledge on PGPR, SiNPs, and their synergistic effects in mitigating salinity stress, with emphasis on physiological, biochemical, and molecular mechanisms. Special attention is given to Si-mediated regulation of stress-responsive genes (e.g., RD29B, DREB2b, RAB18, HKT1, WRKY TFs, CAT, POD) and PGPR-induced gene expression (e.g., GmST1, GmLAX3, NHX1, NRT2.2, GR), which are directly linked to ion homeostasis, osmolyte accumulation, and antioxidant activation. In addition, crop-specific case studies and emerging molecular insights are highlighted to demonstrate practical applications. Despite these promising findings, significant challenges remain, including the stability of nanoformulations, microbial compatibility, and the lack of field-scale validation under diverse agro-climatic conditions. This review highlights knowledge gaps and briefly outlines future directions for the integrated use of PGPR and SiNPs as sustainable strategies to enhance crop resilience under salinity stress. Full article

Salt stress represents one of the most critical abiotic constraints limiting global agricultural productivity by adversely affecting plant growth, metabolism, and yield. Soil salinization disrupts water uptake and nutrient homeostasis, leading to ionic toxicity, osmotic imbalance, and oxidative stress that collectively impair crop development. Cucumis melo, a major horticultural crop of significant economic value, exhibits high sensitivity to salinity. Recent advances have elucidated that melon adapts to salt stress through intricate physiological and molecular mechanisms involving osmotic adjustment, ion transport regulation, antioxidant defense, and transcriptional reprogramming. Several pivotal genes, such as CmNHX1, CmHKT1;1, CmCML13, CmAPX27, and CmRAV1, etc., have been identified to participate in multiple signaling pathways governing salt tolerance in melon. In this review, we comprehensively summarize the physiological effects of salt stress on melon growth, elucidating the key molecular mechanisms underlying salt tolerance, particularly those associated with ion homeostasis, antioxidant defense, and transcriptional regulation. The review further discusses current strategies and future perspectives for the genetic improvement of salt tolerance. Collectively, this review provides a theoretical framework and valuable reference for future research on the molecular basis of salt tolerance and breeding of salt-tolerant melon cultivars. Full article