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Keywords = Dryophytes suweonensis

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26 pages, 5252 KB  
Article
Ensemble Species Distribution Modeling of Climate Change Impacts on Endangered Amphibians and Reptiles in South Korea
by Jae-Ho Lee, Min-Ho Chang, Man-Seok Shin, Eun-Seo Lee, Jae-Seok Lee and Chang-Wan Seo
Animals 2026, 16(1), 95; https://doi.org/10.3390/ani16010095 - 29 Dec 2025
Cited by 1 | Viewed by 2310
Abstract
Climate change poses a serious threat to amphibians and reptiles, which are especially vulnerable because of limited thermoregulatory capacity and restricted dispersal. We used an ensemble species distribution modeling framework to assess habitat determinants, niche breadth, and climate-driven distribution changes for eight legally [...] Read more.
Climate change poses a serious threat to amphibians and reptiles, which are especially vulnerable because of limited thermoregulatory capacity and restricted dispersal. We used an ensemble species distribution modeling framework to assess habitat determinants, niche breadth, and climate-driven distribution changes for eight legally protected endangered amphibian and reptile species in South Korea. Occurrence records collected between 1997 and 2021 were combined with ten bioclimatic, topographic, and hydrological predictors, and 11 species distribution modeling algorithms (SDMs), including Random Forest and MaxEnt, were implemented and combined into weighted ensemble predictions. The weighted ensemble model showed high predictive performance (mean ROC–AUC = 0.897; overall mean across all SDMs = 0.843). Variable-importance analysis revealed clear taxonomic contrasts: reptiles exhibited approximately 1.7-fold greater dependence on temperature variables than amphibians, whereas amphibians were more strongly associated with precipitation and topographic context. Environmental niche-breadth analysis identified Sibynophis chinensis, Hynobius yangi, and Dryophytes suweonensis as narrow- or moderate-niche specialists largely constrained by precipitation of the driest month and a small set of climatic variables. Under moderate (SSP2-4.5) and high (SSP5-8.5) emission scenarios, areas of high species richness are projected to decline by 22% and 45%, respectively, by the 2070s, with distribution centroids shifting northeastward and pronounced habitat loss in western lowland plains. Priority conservation targets include S. chinensis, D. suweonensis, and H. yangi, which combine narrow niches, restricted ranges, and high climate vulnerability. These findings provide a quantitative basis for climate-adaptive conservation planning for threatened herpetofauna in South Korea. Full article
(This article belongs to the Section Ecology and Conservation)
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16 pages, 910 KB  
Article
Optimizing Sperm Cryopreservation from Four Endangered Korean Amphibian Species: Species-Specific Effects of Cryoprotectants and Cooling Regimes on Membrane-Integrity Viability
by Jun-Sung Kim, Da Som Park, Jun-Kyu Park, Ji-Eun Lee, Jeong Chan Moon and Yuno Do
Animals 2025, 15(20), 3013; https://doi.org/10.3390/ani15203013 - 17 Oct 2025
Viewed by 1276
Abstract
Global amphibian populations are declining rapidly and the development of effective cryopreservation protocols for germ cells has become a critical tool in ex situ conservation programs. Post-thaw membrane-integrity viability in four endangered Korean amphibians (Dryophytes suweonensis, Pelophylax chosenicus, Kaloula borealis [...] Read more.
Global amphibian populations are declining rapidly and the development of effective cryopreservation protocols for germ cells has become a critical tool in ex situ conservation programs. Post-thaw membrane-integrity viability in four endangered Korean amphibians (Dryophytes suweonensis, Pelophylax chosenicus, Kaloula borealis, and Hynobius yangi) were evaluated. Sperm were cryopreserved using dimethyl sulfoxide (DMSO) or N,N-dimethylformamide (DMF) at 10–30% (v/v) in combination with 0.6 M sucrose, and were frozen at two suspension heights (5 cm vs. 10 cm) above liquid nitrogen. Post-thaw membrane-integrity viability was assessed using a SYBR-14/propidium iodide membrane-integrity assay (LIVE/DEAD kit). Low concentrations of permeating cryoprotectants (CPs) improved membrane-integrity viability, whereas high concentrations led to high toxicity, particularly with DMSO. Across species, DMF produced the highest membrane-integrity viability and the most consistent performance. The cooling rate influenced membrane-integrity viability, with samples frozen at 10 cm exhibiting greater viability, reflecting the balance between intracellular ice formation during rapid cooling and solution effects during slow cooling. Optimal conditions for D. suweonensis were 15% DMSO at 10 cm (86.5% membrane-integrity viability); for P. chosenicus, 10% DMF at 10 cm (75.5%); and for K. borealis, 10% DMSO at 5 cm (81.6% membrane-integrity viability). Hynobius yangi showed modest improvement under 15% DMF at 5 cm (19.7%), although overall membrane-integrity viability was low. ED50 modeling indicated species-specific thresholds requiring low CP concentrations. Sperm cryopreservation outcomes in amphibians are strongly influenced by CP type, concentration, cooling regime, and species physiology. GLM and ED50 modeling provide a methodological framework for refining cryopreservation strategies for non-model, endangered species. Full article
(This article belongs to the Special Issue Advances in the Reproduction of Wild and Exotic Animals)
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17 pages, 2908 KB  
Article
First Complete Mitochondrial Genome Analysis of Tree Frog, Dryophytes flaviventris and Comparison with Dryophytes suweonensis
by Nakyung Yoo, Kang-Rae Kim, Biet Thanh Tran, Keun-Yong Kim, Mi-Sook Min, Ju-Duk Yoon and Keun-Sik Kim
Int. J. Mol. Sci. 2025, 26(6), 2423; https://doi.org/10.3390/ijms26062423 - 7 Mar 2025
Cited by 1 | Viewed by 2457
Abstract
Mitochondrial genomes (mitogenomes) play a key role in species identification and phylogenetic studies due to their stable gene arrangements and evolutionary insights. Dryophytes flaviventris, classified in 2020 and closely related to D. suweonensis, lacks mitochondrial DNA data for differentiation. This gap [...] Read more.
Mitochondrial genomes (mitogenomes) play a key role in species identification and phylogenetic studies due to their stable gene arrangements and evolutionary insights. Dryophytes flaviventris, classified in 2020 and closely related to D. suweonensis, lacks mitochondrial DNA data for differentiation. This gap hinders accurate species identification, highlighting the need for further genomic studies. The complete mitogenome size of two D. flaviventris were 18,616–18,617 bp and those for two D. suweonensis were 18,610–18,616 bp, the mitogenomes of the two species consisting of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA (tRNA) genes, and a D-loop. Phylogenetic analysis confirmed that the mitochondrial DNA of all four individuals formed a monophyletic group, showing no genetic differentiation. As a result, the two species do not form distinct clades, and mitogenomes could not differentiate them, suggesting they are not reciprocally monophyletic. This study presents the first mitogenome data for D. flaviventris and provides valuable insights into tree frog taxonomy. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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6 pages, 5540 KB  
Communication
Accessing the Accuracy of Citizen Science Data Based on iNaturalist Data
by Kyo-Soung Koo, Jeong-Min Oh, Soo-Jeong Park and Jong-Yoon Im
Diversity 2022, 14(5), 316; https://doi.org/10.3390/d14050316 - 21 Apr 2022
Cited by 35 | Viewed by 7024
Abstract
The number of science projects with citizen (volunteer) participants is increasing nowadays. Despite some advantages citizen science have which directly influence science fields, the largest weakness of citizen science is the issue of the reliability of data collected by non-specialists. In this study, [...] Read more.
The number of science projects with citizen (volunteer) participants is increasing nowadays. Despite some advantages citizen science have which directly influence science fields, the largest weakness of citizen science is the issue of the reliability of data collected by non-specialists. In this study, we assess the reliability of data collected by citizens and identify the factors that impede the credibility. We selected two species, Pelophylax chosenicus and Dryophytes suweonensis, which have specific habitat, breeding and brumation positions. The location data for both species were collected by the global citizen engagement project “iNaturalist”. As a result, 89.3% for P. chosenicus and 37.1% for D. suweonensis of the location data were estimated to be erroneous. No difference was observed in the data accuracy between experts and citizens for D. suweonensis because the mating call is the main classification key for the species. On the other hand, a significant difference was confirmed in the case of P. chosenicus, whose external characteristics are its classification key. Our study shows that efforts to improve reliability, including appropriate species selection and survey methods, are necessary to use citizen participation data in science research. Full article
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12 pages, 3896 KB  
Article
Defining Conservation Requirements for the Suweon Treefrog (Dryophytes suweonensis) Using Species Distribution Models
by Il-Kook Park, Daesik Park and Amaël Borzée
Diversity 2021, 13(2), 69; https://doi.org/10.3390/d13020069 - 9 Feb 2021
Cited by 10 | Viewed by 4573
Abstract
Numerous amphibian species are declining because of habitat loss and fragmentation due to urbanization of landscapes and the construction of roads. This is a mounting threat to species restricted to habitats close to urban areas, such as agricultural wetlands in North East Asia. [...] Read more.
Numerous amphibian species are declining because of habitat loss and fragmentation due to urbanization of landscapes and the construction of roads. This is a mounting threat to species restricted to habitats close to urban areas, such as agricultural wetlands in North East Asia. The Suweon treefrog (Dryophytes suweonensis) falls into the list of species threatened with habitat loss and most populations are under threat of extirpation. Over the last decades, sub-populations have become increasingly disconnected and specifically the density of paved roads has increased around the only site connecting northern and southern Seoul populations. We surveyed this locality in Hojobeol, Siheung, Republic of Korea in 2012, 2015 and 2019 to first confirm the decline in the number of sites where D. suweonensis was present. The second objective was to analyze the habitat characteristics and determine the remaining suitable habitat for D. suweonensis through a species distribution model following the maximum entropy method. Our results show that rice paddy cover and distance from the paved road are the most important factor defining suitable habitat for D. suweonensis. At this locality, uninterrupted rice paddies are a suitable habitat for the species when reaching at least 0.19 km2, with an average distance of 138 ± 93 m2 from the roads. We link the decrease in the number of sites where D. suweonensis is present with the decrease in rice paddy cover, generally replaced by localized infrastructures, greenhouses and habitat fragmentation. Rice paddies should remain connected over a large area for the protection of the remaining populations. In addition, habitat requirements should be integrated in the requisites to designate protected areas. Full article
(This article belongs to the Section Animal Diversity)
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17 pages, 2462 KB  
Article
Recommendations for IUCN Red List Conservation Status of the “Dryophytes immaculatus Group” in North East Asia
by Amaël Borzée
Diversity 2020, 12(9), 336; https://doi.org/10.3390/d12090336 - 1 Sep 2020
Cited by 9 | Viewed by 5759
Abstract
Threat assessment is important to prioritize species conservation projects and planning. The taxonomic resolution regarding the status of the “Dryophytes immaculatus group” and the description of a new species in the Republic of Korea resulted in a shift in ranges and population [...] Read more.
Threat assessment is important to prioritize species conservation projects and planning. The taxonomic resolution regarding the status of the “Dryophytes immaculatus group” and the description of a new species in the Republic of Korea resulted in a shift in ranges and population sizes. Thus, reviewing the IUCN Red List status of the three species from the group: D. immaculatus, D. suweonensis and D. flaviventris and recommending an update is needed. While the three species have similar ecological requirements and are distributed around the Yellow Sea, they are under contrasting anthropological pressure and threats. Here, based on the literature available, I have applied all IUCN Red List criterion and tested the fit of each species in each criteria to recommend listing under the appropriate threat level. This resulted in the recommendation of the following categories: Near Threatened for D. immaculatus, Endangered following the criteria C2a(i)b for D. suweonensis and Critically Endangered following the criteria E for D. flaviventris. All three species are declining, mostly because of landscape changes as a result of human activities, but the differences in range, population dynamics and already extirpated subpopulations result in different threat levels for each species. Dryophytes flaviventris is under the highest threat category mostly because of its limited range segregated into two subpopulations; and several known extirpated subpopulations. Immediate actions for the conservation of this species are required. Dryophytes suweonensis is present in both the Republic of Korea and the Democratic Republic of Korea (DPR Korea) and is under lower ecological pressure in DPR Korea. Dryophytes immaculatus is present in the People’s Republic of China, over a very large range despite a marked decline. I recommend joint efforts for the conservation of these species. Full article
(This article belongs to the Special Issue Biodiversity and Conservation of Tree Frogs)
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19 pages, 4738 KB  
Article
Large-Scale Hybridisation as an Extinction Threat to the Suweon Treefrog (Hylidae: Dryophytes suweonensis)
by Amaël Borzée, Jonathan J. Fong, Hoa Quynh Nguyen and Yikweon Jang
Animals 2020, 10(5), 764; https://doi.org/10.3390/ani10050764 - 27 Apr 2020
Cited by 14 | Viewed by 4544
Abstract
Amphibians are in the midst of a sixth mass extinction, and human activities play a major role in pushing species towards extinction. Landscape anthropisation has impacts that indirectly threaten species, in addition to the obvious destruction of natural habitats. For instance, land modification [...] Read more.
Amphibians are in the midst of a sixth mass extinction, and human activities play a major role in pushing species towards extinction. Landscape anthropisation has impacts that indirectly threaten species, in addition to the obvious destruction of natural habitats. For instance, land modification may bring human-commensal species in contact with sister-clades from which they were previously isolated. The species in these new contact zones are then able to hybridise to the point of reaching lineage fusion, through which the gene pool of the two species merges and one of the parental lineages becomes extirpated. Here, we documented the patterns of hybridisation between the spatially restricted D. suweonensis and the widespread D. japonicus. On the basis of the analysis of Cytochrome c oxidase subunit I mitochondrial DNA sequences (404 individuals from 35 sites) and six polymorphic microsatellites (381 individuals from 34 sites), we revealed a generalised, bi-directional, and geographically widespread hybridisation between the two species. Evidence of fertile back-crosses is provided by relatively high numbers of individuals in cyto-nuclear disequilibrium, as well as the presence of hybrid individuals further south than the species distribution limit, determined on the basis of call properties. Hybridisation is an additional threat to the endangered D. suweonensis. Full article
(This article belongs to the Section Ecology and Conservation)
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