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Keywords = Bacillus pacificus

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18 pages, 1598 KiB  
Review
The Tick Microbiome: The “Other Bacterial Players” in Tick Biocontrol
by Paulina Maldonado-Ruiz
Microorganisms 2024, 12(12), 2451; https://doi.org/10.3390/microorganisms12122451 - 28 Nov 2024
Cited by 1 | Viewed by 2907
Abstract
Hard ticks (family Ixodidae) are one of the most predominant arthropod disease vectors worldwide, second only to mosquitoes. In addition to harboring animal and human pathogens, ticks are known to carry a microbial community constituted of non-pathogenic organisms, which includes maternally inherited intracellular [...] Read more.
Hard ticks (family Ixodidae) are one of the most predominant arthropod disease vectors worldwide, second only to mosquitoes. In addition to harboring animal and human pathogens, ticks are known to carry a microbial community constituted of non-pathogenic organisms, which includes maternally inherited intracellular endosymbionts and other environmentally acquired extracellular microorganisms. These microbial communities, which include bacteria, viruses, protozoans, and fungi—with often commensal, mutualistic, or parasitic associations with the tick—comprise the tick microbiome, bacteria being the most studied community. Many bacterial taxa frequently reported in ticks include soil, plant, and animal-associated microbes, suggesting many are environmentally acquired, including members with known entomopathogenic potential, such as Bacillus thuringiensis, Bacillus spp., and Pseudomonas spp. It has been reported that microbial community composition can impact pathogen persistence, dissemination, and fitness in ticks. In the United States, Ixodes scapularis (northeast) and I. pacificus (west) are the predominant vectors of Borrelia burgdorferi, the causal agent of Lyme disease. Amblyomma americanum is another important tick vector in the U.S. and is becoming an increasing concern as it is the leading cause of alpha-gal syndrome (AGS, or red meat allergy). This condition is caused by tick bites containing the galactose alpha 1,3 galactose (alpha-gal) epitope in their saliva. In this paper, we present a summary of the tick microbiome, including the endosymbiotic bacteria and the environmentally acquired (here referred to as the non-endosymbiotic community). We will focus on the non-endosymbiotic bacteria from Ixodes spp. and Amblyomma americanum and discuss their potential for novel biocontrol strategies. Full article
(This article belongs to the Special Issue Ticks, Tick Microbiome and Tick-Borne Diseases)
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14 pages, 2020 KiB  
Article
Characterization of Bacillus pacificus G124 and Its Promoting Role in Plant Growth and Drought Tolerance
by Xiaolan Ma, Benyin Zhang, Xin Xiang, Wenjing Li, Jiao Li, Yang Li, Lam-Son Phan Tran and Hengxia Yin
Plants 2024, 13(20), 2864; https://doi.org/10.3390/plants13202864 - 13 Oct 2024
Cited by 2 | Viewed by 2321
Abstract
Drought represents a major environmental threat to global agricultural productivity. Employing plant growth-promoting rhizobacteria (PGPR) offers a promising strategy to enhance plant growth and resilience under drought stress. In this study, the strain G124, isolated from the arid region of Qinghai, was characterized [...] Read more.
Drought represents a major environmental threat to global agricultural productivity. Employing plant growth-promoting rhizobacteria (PGPR) offers a promising strategy to enhance plant growth and resilience under drought stress. In this study, the strain G124, isolated from the arid region of Qinghai, was characterized at the molecular level, and its ability to enhance plant drought tolerance was validated through pot experiments. The findings revealed that the strain G124 belongs to Bacillus pacificus, with a 99.93% sequence similarity with B. pacificus EB422 and clustered within the same clade. Further analysis indicated that the strain G124 demonstrated a variety of growth-promoting characteristics, including siderophore production, phosphate solubilization, and the synthesis of indole-3-acetic acid (IAA), among others. Moreover, inoculation with B. pacificus G124 resulted in significant enhancements in plant height, leaf area, chlorophyll content, relative water content, and root development in both Arabidopsis thaliana and Medicago sativa seedlings under drought conditions. Additionally, G124 boosted antioxidant enzyme activities and osmolyte accumulation, while reducing malondialdehyde (MDA) and reactive oxygen species (ROS) levels in M. sativa seedlings exposed to drought. These findings suggest that B. pacificus G124 holds significant promise for enhancing plant drought tolerance and could be effectively utilized in crop management strategies under arid conditions. Full article
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6 pages, 494 KiB  
Proceeding Paper
Effect of Different Carriers and Storage Temperatures on the Viability of Bacillus thuringiensis B9 and Bacillus pacificus B11 Isolated from Tomato (Solanum lycopersicum L.) Rhizosphere
by Idriss Djoko Kouam, Laverdure Tchamani, Germain Ntsoli, Marie Amperes Bedine, Roland Wilfried Titti and Aoudou Yaouba
Biol. Life Sci. Forum 2024, 30(1), 27; https://doi.org/10.3390/IOCAG2023-17337 - 18 Apr 2024
Viewed by 876
Abstract
The present study aimed to evaluate the use of agricultural waste as carriers in the bioformulation of two plant growth promoting bacteria (PGPR), Bacillus thuringiensis B9 and Bacillus pacificus B11 isolated from the tomato rhizosphere, and to determine the effect of different carriers [...] Read more.
The present study aimed to evaluate the use of agricultural waste as carriers in the bioformulation of two plant growth promoting bacteria (PGPR), Bacillus thuringiensis B9 and Bacillus pacificus B11 isolated from the tomato rhizosphere, and to determine the effect of different carriers and storage temperatures on bacterial survival. Three carriers, namely palm nut shell biochar, coffee pulp and soil, were inoculated with one of the strains, dehydrated and stored at ambient and refrigeration temperatures (4 °C). Bacterial survival was evaluated for 150 days at 30-day intervals. The results showed that the number of bacterial cells present in the bioformulations decreased progressively with storage time at room temperature, but at refrigeration temperature, the bacterial population initially decreased before increasing until reaching its maximum population at 90 days and gradually decreasing afterward. Although the coffee pulp and biochar carriers stored at 4 °C retained the viability of the bacterial strains as well as possible, the formulations stored at room temperature also remained viable. Full article
(This article belongs to the Proceedings of The 2nd International Online Conference on Agriculture)
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17 pages, 6145 KiB  
Article
Whole Genome Sequencing Reveals Antimicrobial Resistance and Virulence Genes of Both Pathogenic and Non-Pathogenic B. cereus Group Isolates from Foodstuffs in Thailand
by Phornphan Sornchuer, Kritsakorn Saninjuk, Sumet Amonyingcharoen, Jittiporn Ruangtong, Nattaya Thongsepee, Pongsakorn Martviset, Pathanin Chantree and Kant Sangpairoj
Antibiotics 2024, 13(3), 245; https://doi.org/10.3390/antibiotics13030245 - 7 Mar 2024
Cited by 11 | Viewed by 3814
Abstract
Members of the Bacillus cereus group are spore-forming Gram-positive bacilli that are commonly associated with diarrheal or emetic food poisoning. They are widespread in nature and frequently present in both raw and processed food products. Here, we genetically characterized 24 B. cereus group [...] Read more.
Members of the Bacillus cereus group are spore-forming Gram-positive bacilli that are commonly associated with diarrheal or emetic food poisoning. They are widespread in nature and frequently present in both raw and processed food products. Here, we genetically characterized 24 B. cereus group isolates from foodstuffs. Whole-genome sequencing (WGS) revealed that most of the isolates were closely related to B. cereus sensu stricto (12 isolates), followed by B. pacificus (5 isolates), B. paranthracis (5 isolates), B. tropicus (1 isolate), and “B. bingmayongensis” (1 isolate). The most detected virulence genes were BAS_RS06430, followed by bacillibactin biosynthesis genes (dhbA, dhbB, dhbC, dhbE, and dhbF), genes encoding the three-component non-hemolytic enterotoxin (nheA, nheB, and nheC), a gene encoding an iron-regulated leucine-rich surface protein (ilsA), and a gene encoding a metalloprotease (inhA). Various biofilm-associated genes were found, with high prevalences of tasA and sipW genes (matrix protein-encoding genes); purA, purC, and purL genes (eDNA synthesis genes); lytR and ugd genes (matrix polysaccharide synthesis genes); and abrB, codY, nprR, plcR, sinR, and spo0A genes (biofilm transcription regulator genes). Genes related to fosfomycin and beta-lactam resistance were identified in most of the isolates. We therefore demonstrated that WGS analysis represents a useful tool for rapidly identifying and characterizing B. cereus group strains. Determining the genetic epidemiology, the presence of virulence and antimicrobial resistance genes, and the pathogenic potential of each strain is crucial for improving the risk assessment of foodborne B. cereus group strains. Full article
(This article belongs to the Special Issue Antimicrobial Resistance: What Can We Learn from Genomics?)
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31 pages, 5504 KiB  
Article
Plant-Associated Representatives of the Bacillus cereus Group Are a Rich Source of Antimicrobial Compounds
by Joachim Vater, Le Thi Thanh Tam, Jennifer Jähne, Stefanie Herfort, Christian Blumenscheit, Andy Schneider, Pham Thi Luong, Le Thi Phuong Thao, Jochen Blom, Silke R. Klee, Thomas Schweder, Peter Lasch and Rainer Borriss
Microorganisms 2023, 11(11), 2677; https://doi.org/10.3390/microorganisms11112677 - 31 Oct 2023
Cited by 4 | Viewed by 2800
Abstract
Seventeen bacterial strains able to suppress plant pathogens have been isolated from healthy Vietnamese crop plants and taxonomically assigned as members of the Bacillus cereus group. In order to prove their potential as biocontrol agents, we perform a comprehensive analysis that included the [...] Read more.
Seventeen bacterial strains able to suppress plant pathogens have been isolated from healthy Vietnamese crop plants and taxonomically assigned as members of the Bacillus cereus group. In order to prove their potential as biocontrol agents, we perform a comprehensive analysis that included the whole-genome sequencing of selected strains and the mining for genes and gene clusters involved in the synthesis of endo- and exotoxins and secondary metabolites, such as antimicrobial peptides (AMPs). Kurstakin, thumolycin, and other AMPs were detected and characterized by different mass spectrometric methods, such as MALDI-TOF-MS and LIFT-MALDI-TOF/TOF fragment analysis. Based on their whole-genome sequences, the plant-associated isolates were assigned to the following species and subspecies: B. cereus subsp. cereus (6), B. cereus subsp. bombysepticus (5), Bacillus tropicus (2), and Bacillus pacificus. These three isolates represent novel genomospecies. Genes encoding entomopathogenic crystal and vegetative proteins were detected in B. cereus subsp. bombysepticus TK1. The in vitro assays revealed that many plant-associated isolates enhanced plant growth and suppressed plant pathogens. Our findings indicate that the plant-associated representatives of the B. cereus group are a rich source of putative antimicrobial compounds with potential in sustainable agriculture. However, the presence of virulence genes might restrict their application as biologicals in agriculture. Full article
(This article belongs to the Special Issue Biological Control of the Plant Pathogens)
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15 pages, 2354 KiB  
Article
Antimicrobial Susceptibility Profile and Whole-Genome Analysis of a Strong Biofilm-Forming Bacillus Sp. B87 Strain Isolated from Food
by Phornphan Sornchuer, Kritsakorn Saninjuk, Parisa Prathaphan, Rattana Tiengtip and Suphot Wattanaphansak
Microorganisms 2022, 10(2), 252; https://doi.org/10.3390/microorganisms10020252 - 23 Jan 2022
Cited by 20 | Viewed by 5197
Abstract
Members of the Bacillus cereus group are considered to be foodborne pathogens commonly associated with diarrheal and emetic gastrointestinal syndromes. Biofilm formation is a major virulence determinant of various pathogenic bacteria, including the B. cereus strains, since it can protect the bacteria against [...] Read more.
Members of the Bacillus cereus group are considered to be foodborne pathogens commonly associated with diarrheal and emetic gastrointestinal syndromes. Biofilm formation is a major virulence determinant of various pathogenic bacteria, including the B. cereus strains, since it can protect the bacteria against antimicrobial agents and the host immune response. Moreover, a biofilm allows the exchange of genetic material, such as antimicrobial resistance genes, among the different bacterial strains inside the matrix. The aim of the current study was to genotypically and phenotypically characterize Bacillus sp. B87, a strain that was isolated from food and which exhibited strong biofilm-forming capacity. Based on the analysis of the phylogenetic relationship, the isolate was phylogenetically mapped close to Bacillus pacificus. Antimicrobial susceptibility testing revealed that the isolate was resistant to tetracycline and β-lactam antimicrobial agents, which corresponded with the genotypic characterization using the whole-genome analysis. The genome of Bacillus sp. B87 carried the three-component non-hemolytic enterotoxin (NHE), which is a type of enterotoxin that causes diarrheal symptoms. In addition, the genome also contained several genes that participate in biofilm formation, including the pelDEADAFG operon. These findings expand our understanding of antimicrobial resistance and virulence in Bacillus species based on the link between genotypic and phenotypic characterization. Full article
(This article belongs to the Section Biofilm)
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13 pages, 2733 KiB  
Article
Alpha Amylase from Bacillus pacificus Associated with Brown Algae Turbinaria ornata: Cultural Conditions, Purification, and Biochemical Characterization
by Mona Alonazi, Aida Karray, Ahmed Yacine Badjah-Hadj-Ahmed and Abir Ben Bacha
Processes 2021, 9(1), 16; https://doi.org/10.3390/pr9010016 - 23 Dec 2020
Cited by 11 | Viewed by 4844
Abstract
We aimed in the current study, the identification of a marine bacterial amylase produced by Bacillus pacificus, which was associated with Turbinaria ornata. Cultural conditions were optimized for the highest amylase production on Tryptic soy broth media supplemented with starch 1% [...] Read more.
We aimed in the current study, the identification of a marine bacterial amylase produced by Bacillus pacificus, which was associated with Turbinaria ornata. Cultural conditions were optimized for the highest amylase production on Tryptic soy broth media supplemented with starch 1% at initial pH 9, 55 °C for 24 h. The newly purified amylase was characterized for a possible biotechnological application. Data indicated that the obtained amylase with a molecular weight of 40 kD and the N-terminal sequence of the first 30 amino acids of amBp showed a high degree of homology with known alpha amylase, and was stable at 60 °C of pH 11. Among the tested substrate analogs, amBp was almost fully active on Alylose and Alylopectine (97%), but moderately hydrolyzed glycogen < sucrose < maltose < lactose. Therefore, the current amylase mainly generated maltohexaose from starch. Mg2+ and Zn2+ improved amylase activity up to 170%. While ethylenediamine tetraacetic acid (EDTA) similarly induced the greatest activity with purified amylase, PCMB had the least effect. Regarding all these characteristics, amylase from marine bacterial symbionts amBp has a new promising feature for probable therapeutic, industrial, and nutritional applications. Full article
(This article belongs to the Special Issue Applied Enzymology & Environmental Biotechnology)
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14 pages, 1116 KiB  
Article
Identification of Distinct Bacillus thuringiensis 4A4 Nematicidal Factors Using the Model Nematodes Pristionchus pacificus and Caenorhabditis elegans
by Igor Iatsenko, Angel Nikolov and Ralf J. Sommer
Toxins 2014, 6(7), 2050-2063; https://doi.org/10.3390/toxins6072050 - 14 Jul 2014
Cited by 22 | Viewed by 12527
Abstract
Bacillus thuringiensis has been extensively used for the biological control of insect pests. Nematicidal B. thuringiensis strains have also been identified; however, virulence factors of such strains are poorly investigated. Here, we describe virulence factors of the nematicidal B. thuringiensis 4A4 strain, using [...] Read more.
Bacillus thuringiensis has been extensively used for the biological control of insect pests. Nematicidal B. thuringiensis strains have also been identified; however, virulence factors of such strains are poorly investigated. Here, we describe virulence factors of the nematicidal B. thuringiensis 4A4 strain, using the model nematodes Pristionchus pacificus and Caenorhabditis elegans. We show that B. thuringiensis 4A4 kills both nematodes via intestinal damage. Whole genome sequencing of B. thuringiensis 4A4 identified Cry21Ha, Cry1Ba, Vip1/Vip2 and β-exotoxin as potential nematicidal factors. Only Cry21Ha showed toxicity to C. elegans, while neither Cry nor Vip toxins were active against P. pacificus, when expressed in E. coli. Purified crystals also failed to intoxicate P. pacificus, while autoclaved spore-crystal mixture of B. thuringiensis 4A4 retained toxicity, suggesting that primary β-exotoxin is responsible for P. pacificus killing. In support of this, we found that a β-exotoxin-deficient variant of B. thuringiensis 4A4, generated by plasmid curing lost virulence to the nematodes. Thus, using two model nematodes we revealed virulence factors of the nematicidal strain B. thuringiensis 4A4 and showed the multifactorial nature of its virulence. Full article
(This article belongs to the Special Issue Bacillus thuringiensis Toxins)
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