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Authors = Yunfeng Tan

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13 pages, 2522 KiB  
Article
Identification of Leaf Stripe Resistance Genes in Hulless Barley Landrace Teliteqingke from Qinghai-Tibet Plateau
by Zemin Tan, Sai Zhang, Yunfeng Qu, Shenghua Kang, Shiyu Fang and Lu Hou
Int. J. Mol. Sci. 2025, 26(3), 1133; https://doi.org/10.3390/ijms26031133 - 28 Jan 2025
Viewed by 828
Abstract
Leaf stripe disease, caused by Pyrenophora graminea, is a seed-borne fungal disease that significantly impacts hulless barley (Hordeum vulgare var. nudum) production on the Qinghai-Tibet Plateau. This study aimed to identify genetic factors conferring resistance to the leaf stripe by [...] Read more.
Leaf stripe disease, caused by Pyrenophora graminea, is a seed-borne fungal disease that significantly impacts hulless barley (Hordeum vulgare var. nudum) production on the Qinghai-Tibet Plateau. This study aimed to identify genetic factors conferring resistance to the leaf stripe by analyzing an F3 population derived from a cross between the resistant landrace Teliteqingke and the susceptible landrace Dulihuang. Genetic analysis revealed that resistance in Teliteqingke was governed by two dominant genes. Using bulked segregant analysis combined with an SNP array (BSA-SNP) and RNA-seq, we identified two candidate regions on chromosomes 3H and 7H. Further analysis focused on chromosome 3H, which revealed a candidate genomic region containing seven potential disease-resistance genes. Among these, RT-qPCR experiments demonstrated significant expression induction of HORVU.MOREX.r3.3HG0232110.1 (encoding a RING/U-box superfamily protein) and HORVU.MOREX.r3.3HG0232410.1 (encoding a bZIP transcription factor) showed significant expression induction following inoculation with P. graminea. These genes are strong candidates for the resistance mechanism against leaf stripes in Teliteqingke. These results provide a foundation for functional validation of these genes and offer valuable insights for breeding disease-resistant hulless barley. Full article
(This article belongs to the Special Issue Molecular Research Progress of Cereal Crop Disease Resistance)
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17 pages, 4356 KiB  
Article
Research on Cartilage 3D Printing Technology Based on SA-GA-HA
by Yong Chen, Youping Gong, Lijun Shan, Chou Yong Tan, MS Al-Furjan, S. Ramesh, Huipeng Chen, Xiangjuan Bian, Yanda Chen, Yunfeng Liu and Rougang Zhou
Materials 2023, 16(15), 5312; https://doi.org/10.3390/ma16155312 - 28 Jul 2023
Cited by 5 | Viewed by 1799
Abstract
Cartilage damage is difficult to heal and poses a serious problem to human health as it can lead to osteoarthritis. In this work, we explore the application of biological 3D printing to manufacture new cartilage scaffolds to promote cartilage regeneration. The hydrogel made [...] Read more.
Cartilage damage is difficult to heal and poses a serious problem to human health as it can lead to osteoarthritis. In this work, we explore the application of biological 3D printing to manufacture new cartilage scaffolds to promote cartilage regeneration. The hydrogel made by mixing sodium alginate (SA) and gelatin (GA) has high biocompatibility, but its mechanical properties are poor. The addition of hydroxyapatite (HA) can enhance its mechanical properties. In this paper, the preparation scheme of the SA-GA-HA composite hydrogel cartilage scaffold was explored, the scaffolds prepared with different concentrations were compared, and better formulations were obtained for printing and testing. Mathematical modeling of the printing process of the bracket, simulation analysis of the printing process based on the mathematical model, and adjustment of actual printing parameters based on the results of the simulation were performed. The cartilage scaffold, which was printed using Bioplotter 3D printer, exhibited useful mechanical properties suitable for practical needs. In addition, ATDC-5 cells were seeded on the cartilage scaffolds and the cell survival rate was found to be higher after one week. The findings demonstrated that the fabricated chondrocyte scaffolds had better mechanical properties and biocompatibility, providing a new scaffold strategy for cartilage tissue regeneration. Full article
(This article belongs to the Special Issue Elastic Behaviour of Composites)
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20 pages, 8881 KiB  
Review
Gravitational Surface Vortex Formation and Suppression Control: A Review from Hydrodynamic Characteristics
by Gaoan Zheng, Zeheng Gu, Weixin Xu, Bin Lu, Qihan Li, Yunfeng Tan, Chengyan Wang and Lin Li
Processes 2023, 11(1), 42; https://doi.org/10.3390/pr11010042 - 25 Dec 2022
Cited by 36 | Viewed by 5104
Abstract
The energy-conversion stability of hydropower is critical to satisfy the growing demand for electricity. In low-head hydropower plants, a gravitational surface vortex is easily generated, which causes irregular shock vibrations that damage turbine performance and input-flow stability. The gravitational surface vortex is a [...] Read more.
The energy-conversion stability of hydropower is critical to satisfy the growing demand for electricity. In low-head hydropower plants, a gravitational surface vortex is easily generated, which causes irregular shock vibrations that damage turbine performance and input-flow stability. The gravitational surface vortex is a complex fluid dynamic problem with high nonlinear features. Here, we thoroughly investigate its essential hydrodynamic properties, such as Ekman layer transport, heat/mass transfer, pressure pulsation, and vortex-induced vibration, and we note some significant scientific issues as well as future research directions and opportunities. Our findings show that the turbulent Ekman layer analytical solution and vortex multi-scale modeling technology, the working condition of the vortex across the scale heat/mass transfer mechanism, the high-precision measurement technology for high-speed turbulent vortexes, and the gas–liquid–solid three-phase vortex dynamics model are the main research directions. The vortex-induced vibration transition mechanism of particle flow in complex restricted pipelines, as well as the improvement of signal processing algorithms and a better design of anti-spin/vortex elimination devices, continue to draw attention. The relevant result can offer a helpful reference for fluid-induced vibration detection and provide a technical solution for hydropower energy conversion. Full article
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19 pages, 6002 KiB  
Article
The Qc5 Allele Increases Wheat Bread-Making Quality by Regulating SPA and SPR
by Zhenru Guo, Qing Chen, Jing Zhu, Yan Wang, Yang Li, Qingcheng Li, Kan Zhao, Yue Li, Rui Tang, Xiaoli Shi, Kenan Tan, Li Kong, Yunfeng Jiang, Qiantao Jiang, Jirui Wang, Guoyue Chen, Yuming Wei, Youliang Zheng and Pengfei Qi
Int. J. Mol. Sci. 2022, 23(14), 7581; https://doi.org/10.3390/ijms23147581 - 8 Jul 2022
Cited by 5 | Viewed by 3725
Abstract
Common wheat (Triticum aestivum L.) is an important food crop with a unique processing quality. The Q gene positively regulates the processing quality of wheat, but the underlying mechanism remains unclear. Here, a new Q allele (Qc5) responsible for [...] Read more.
Common wheat (Triticum aestivum L.) is an important food crop with a unique processing quality. The Q gene positively regulates the processing quality of wheat, but the underlying mechanism remains unclear. Here, a new Q allele (Qc5) responsible for compact spikes and good bread performance was identified. Compared with the Q allele widely distributed in modern common wheat cultivars, Qc5 had a missense mutation outside the miRNA172-binding site. This missense mutation led to a more compact messenger RNA (mRNA) secondary structure around the miRNA172-binding region, resulting in increased Qc5 expression during the spike development stage and a consequent increase in spike density. Furthermore, this missense mutation weakened the physical interaction between Qc5 and storage protein activator (SPA) in seeds and suppressed the expression of storage protein repressor (SPR). These changes increased the grain protein content and improved the bread-making quality of wheat. In conclusion, a missense mutation increases Q expression because of the resulting highly folded mRNA secondary structure around the miRNA172-binding site. Furthermore, this mutation improves the bread-making quality of wheat by repressing the expression of SPR and influencing the physical interaction between Q and SPA. These findings provide new insights into the miRNA172-directed regulation of gene expression, with implications for wheat breeding. Full article
(This article belongs to the Special Issue Molecular Genetics and Plant Breeding 2.0)
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9 pages, 2124 KiB  
Article
As-Doped h-BN Monolayer: A High Sensitivity and Short Recovery Time SF6 Decomposition Gas Sensor
by Yunfeng Long, Sheng-Yuan Xia, Liang-Yan Guo, Yaxiong Tan and Zhengyong Huang
Sensors 2022, 22(13), 4797; https://doi.org/10.3390/s22134797 - 24 Jun 2022
Cited by 17 | Viewed by 2235
Abstract
SF6 is a common insulating medium of gas-insulated switchgear (GIS). However, it is inevitable that SF6 will be decomposed due to partial discharge (PD) in GIS, which will cause hidden dangers to the safe and stable operation of equipment. Based on [...] Read more.
SF6 is a common insulating medium of gas-insulated switchgear (GIS). However, it is inevitable that SF6 will be decomposed due to partial discharge (PD) in GIS, which will cause hidden dangers to the safe and stable operation of equipment. Based on the DFT method, the two-dimensional nano-composite As-doped h-BN (As-BN) monolayer was proposed. By modeling and calculating, the ability of an As-BN monolayer as a specific sensor for SO2F2 (compared with an H2O adsorption system and CO2 adsorption system) was evaluated by parameters such as the binding energy (Eb), adsorption energy (Eads), transfer charge (ΔQ), geometric structure parameters, the total density of states (TDOS), band structure, charge difference density (CDD), electron localization function (ELF), sensitivity (S), and recovery time (τ). The results showed that an As-BN monolayer showed strong adsorption specificity, high sensitivity, and short recovery time for SO2F2 gas molecules. Therefore, the As-BN monolayer sensor has great application potential in the detection of SF6 decomposition gases. Full article
(This article belongs to the Section Physical Sensors)
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19 pages, 1416 KiB  
Article
Livelihood Capital Effects on Famers’ Strategy Choices in Flood-Prone Areas—A Study in Rural China
by Yibin Ao, Ling Tan, Qiqi Feng, Liyao Tan, Hongfu Li, Yan Wang, Tong Wang and Yunfeng Chen
Int. J. Environ. Res. Public Health 2022, 19(12), 7535; https://doi.org/10.3390/ijerph19127535 - 20 Jun 2022
Cited by 17 | Viewed by 3379
Abstract
The global climate change has resulted in huge flood damages, which seriously hinders the sustainable development of rural economy and society and causes famers’ livelihood problems. In flood-prone areas, it is imperative to actively study short and long-term strategies and solve farmers’ livelihood [...] Read more.
The global climate change has resulted in huge flood damages, which seriously hinders the sustainable development of rural economy and society and causes famers’ livelihood problems. In flood-prone areas, it is imperative to actively study short and long-term strategies and solve farmers’ livelihood problems accordingly. Following the sustainable development analysis framework proposed by the Department for International Development (DFID), this study collects empirical data of 360 rural households in six sample villages in the Jialing River Basin of Sichuan Province, China through a village-to-household field questionnaire and applies the Multinominal Logit Model (MNL) to explore the influence of farmer households’ capital on livelihood strategy choice. Research results show that: (1) In human capital category, the education level of the household head has a significant positive impact on the livelihood strategies of farmers’ families; (2) In physical capital category, farmer households with larger space have more funds to choose among flood adaptation strategies; (3) In natural capital category, house location and the sale of family property for cash have the greatest negative impact on farmers’ livelihood strategies; (4) Rural households with more credit opportunities in financial capital are more willing to obtain emergency relief funds; (5) Farmers’ families helped by the village for a long time will probably not choose to move to avoid floods, but are more likely to choose buying flood insurance. This study provides an empirical reference for effective short and long term prevention and mitigation strategies design and application in rural in flood-prone areas. Full article
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14 pages, 3284 KiB  
Article
Competitive Growth of Sulfate-Reducing Bacteria with Bioleaching Acidophiles for Bioremediation of Heap Bioleaching Residue
by Aung Kyaw Phyo, Yan Jia, Qiaoyi Tan, Heyun Sun, Yunfeng Liu, Bingxu Dong and Renman Ruan
Int. J. Environ. Res. Public Health 2020, 17(8), 2715; https://doi.org/10.3390/ijerph17082715 - 15 Apr 2020
Cited by 31 | Viewed by 4366
Abstract
Mining waste rocks containing sulfide minerals naturally provide the habitat for iron- and sulfur-oxidizing microbes, and they accelerate the generation of acid mine drainage (AMD) by promoting the oxidation of sulfide minerals. Sulfate-reducing bacteria (SRB) are sometimes employed to treat the AMD solution [...] Read more.
Mining waste rocks containing sulfide minerals naturally provide the habitat for iron- and sulfur-oxidizing microbes, and they accelerate the generation of acid mine drainage (AMD) by promoting the oxidation of sulfide minerals. Sulfate-reducing bacteria (SRB) are sometimes employed to treat the AMD solution by microbial-induced metal sulfide precipitation. It was attempted for the first time to grow SRB directly in the pyritic heap bioleaching residue to compete with the local iron- and sulfur-oxidizing microbes. The acidic SRB and iron-reducing microbes were cultured at pH 2.0 and 3.0. After it was applied to the acidic heap bioleaching residue, it showed that the elevated pH and the organic matter was important for them to compete with the local bioleaching acidophiles. The incubation with the addition of organic matter promoted the growth of SRB and iron-reducing microbes to inhibit the iron- and sulfur-oxidizing microbes, especially organic matter together with some lime. Under the growth of the SRB and iron-reducing microbes, pH increased from acidic to nearly neutral, the Eh also decreased, and the metal, precipitated together with the microbial-generated sulfide, resulted in very low Cu in the residue pore solution. These results prove the inhibition of acid mine drainage directly in situ of the pyritic waste rocks by the promotion of the growth of SRB and iron-reducing microbes to compete with local iron and sulfur-oxidizing microbes, which can be used for the source control of AMD from the sulfidic waste rocks and the final remediation. Full article
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19 pages, 4998 KiB  
Article
Effect of Temperature Variation and Pre-Sustained Loading on the Bond between Basalt FRP Sheets and Concrete
by Jun He, Zhongyu Lu, Sirong Tan, Tamon Ueda, Yunfeng Pan, Jianhe Xie and Guijun Xian
Materials 2020, 13(7), 1530; https://doi.org/10.3390/ma13071530 - 26 Mar 2020
Cited by 3 | Viewed by 2310
Abstract
The coupled effects of temperature variation and pre-sustained loading on the bond between basalt fiber reinforced polymer (BFRP) sheets and a concrete substrate were studied. Single lap-shear test specimens were exposed to temperatures of 15, 30, 40, 50, and 60 °C for 3 [...] Read more.
The coupled effects of temperature variation and pre-sustained loading on the bond between basalt fiber reinforced polymer (BFRP) sheets and a concrete substrate were studied. Single lap-shear test specimens were exposed to temperatures of 15, 30, 40, 50, and 60 °C for 3 h with pre-sustained loading at 35% of the ultimate load capacity (Fu). Compared with the case of 15 °C, the interfacial fracture energy of the specimens at 30 and 40 °C increased by 46% and 11%, respectively, whereas those reduced by 73% and 77% at 50 and 60 °C, respectively. The coupled effects of temperature and pre-sustained loading on the effective bond length are insignificant for the specimens at both 15 and 30 °C and the effective bond length increased to 300 mm when the temperature exceeded 40 °C. The failure crack still occurred in the concrete substrate at the temperatures of 15 and 30 °C, and changed to the debonding of the adhesive layer from the concrete substrate at the temperature above 30 °C. Full article
(This article belongs to the Section Construction and Building Materials)
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12 pages, 3029 KiB  
Article
Spin Rate Effects in a Micromachined Electrostatically Suspended Gyroscope
by Boqian Sun, Shunyue Wang, Yidong Tan, Yunfeng Liu and Fengtian Han
Sensors 2018, 18(11), 3901; https://doi.org/10.3390/s18113901 - 12 Nov 2018
Cited by 1 | Viewed by 3935
Abstract
Spin rate of a high-speed spinning-rotor gyroscope will make a significant impact on angular rate sensor performances such as the scale factor, resolution, measurement range, and bias stability. This paper presents the spin rate effects on performance indicators of a microelectromechanical systems (MEMS) [...] Read more.
Spin rate of a high-speed spinning-rotor gyroscope will make a significant impact on angular rate sensor performances such as the scale factor, resolution, measurement range, and bias stability. This paper presents the spin rate effects on performance indicators of a microelectromechanical systems (MEMS) gyroscope where a free-spinning rotor is electrostatically suspended in an evacuated vacuum cavity and functions as a dual-axis angular rate sensor. Theoretical models of the scale factor and measurement range of such a spinning-rotor gyroscope are derived. The experimental results indicate that the measured scale factors at different settings of the spin rate match well with the theoretical predication. In order to separate the disturbance component of the rotation control loop on the gyroscope output, a testing strategy is proposed by operating the gyroscope at different spin rates. Experimental results on a prototype gyroscope show that the squared drive voltage generated by the rotation control loop is approximately proportional to the noise of the gyroscope output. It was further investigated that an improved performance of such spinning-rotor gyroscopes can be achieved by operating the gyroscope rotor at an optimal spin rate. Full article
(This article belongs to the Special Issue Gyroscopes and Accelerometers)
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9 pages, 7057 KiB  
Article
Absolute Position Sensing Based on a Robust Differential Capacitive Sensor with a Grounded Shield Window
by Yang Bai, Yunfeng Lu, Pengcheng Hu, Gang Wang, Jinxin Xu, Tao Zeng, Zhengkun Li, Zhonghua Zhang and Jiubin Tan
Sensors 2016, 16(5), 680; https://doi.org/10.3390/s16050680 - 11 May 2016
Cited by 23 | Viewed by 6154
Abstract
A simple differential capacitive sensor is provided in this paper to measure the absolute positions of length measuring systems. By utilizing a shield window inside the differential capacitor, the measurement range and linearity range of the sensor can reach several millimeters. What is [...] Read more.
A simple differential capacitive sensor is provided in this paper to measure the absolute positions of length measuring systems. By utilizing a shield window inside the differential capacitor, the measurement range and linearity range of the sensor can reach several millimeters. What is more interesting is that this differential capacitive sensor is only sensitive to one translational degree of freedom (DOF) movement, and immune to the vibration along the other two translational DOFs. In the experiment, we used a novel circuit based on an AC capacitance bridge to directly measure the differential capacitance value. The experimental result shows that this differential capacitive sensor has a sensitivity of 2 × 10−4 pF/μm with 0.08 μm resolution. The measurement range of this differential capacitive sensor is 6 mm, and the linearity error are less than 0.01% over the whole absolute position measurement range. Full article
(This article belongs to the Section Physical Sensors)
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25 pages, 3162 KiB  
Review
Synthetic Biology: A Bridge between Artificial and Natural Cells
by Yunfeng Ding, Fan Wu and Cheemeng Tan
Life 2014, 4(4), 1092-1116; https://doi.org/10.3390/life4041092 - 19 Dec 2014
Cited by 34 | Viewed by 20056
Abstract
Artificial cells are simple cell-like entities that possess certain properties of natural cells. In general, artificial cells are constructed using three parts: (1) biological membranes that serve as protective barriers, while allowing communication between the cells and the environment; (2) transcription and translation [...] Read more.
Artificial cells are simple cell-like entities that possess certain properties of natural cells. In general, artificial cells are constructed using three parts: (1) biological membranes that serve as protective barriers, while allowing communication between the cells and the environment; (2) transcription and translation machinery that synthesize proteins based on genetic sequences; and (3) genetic modules that control the dynamics of the whole cell. Artificial cells are minimal and well-defined systems that can be more easily engineered and controlled when compared to natural cells. Artificial cells can be used as biomimetic systems to study and understand natural dynamics of cells with minimal interference from cellular complexity. However, there remain significant gaps between artificial and natural cells. How much information can we encode into artificial cells? What is the minimal number of factors that are necessary to achieve robust functioning of artificial cells? Can artificial cells communicate with their environments efficiently? Can artificial cells replicate, divide or even evolve? Here, we review synthetic biological methods that could shrink the gaps between artificial and natural cells. The closure of these gaps will lead to advancement in synthetic biology, cellular biology and biomedical applications. Full article
(This article belongs to the Special Issue Protocells - Designs for Life)
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