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Authors = Prasenjit Das ORCID = 0000-0001-7090-0272

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17 pages, 2535 KiB  
Article
Climate-Induced Heat Stress Responses on Indigenous Varieties and Elite Hybrids of Mango (Mangifera indica L.)
by Amar Kant Kushwaha, Damodaran Thukkaram, Dheerendra Rastogi, Ningthoujam Samarendra Singh, Karma Beer, Prasenjit Debnath, Vishambhar Dayal, Ashish Yadav, Swosti Suvadarsini Das, Anju Bajpai and Muthukumar Manoharan
Agriculture 2025, 15(15), 1619; https://doi.org/10.3390/agriculture15151619 - 26 Jul 2025
Viewed by 360
Abstract
Mango is highly sensitive to heat stress, which directly affects the yield and quality. The extreme heat waves of 2024, with temperatures reaching 41–47 °C over 25 days, caused significant impacts on sensitive cultivars. The impact of heat waves on ten commercial cultivars [...] Read more.
Mango is highly sensitive to heat stress, which directly affects the yield and quality. The extreme heat waves of 2024, with temperatures reaching 41–47 °C over 25 days, caused significant impacts on sensitive cultivars. The impact of heat waves on ten commercial cultivars from subtropical regions viz.,‘Dashehari’, ‘Langra’, ‘Chausa’, ‘Bombay Green’, ‘Himsagar’, ‘Amrapali’, ‘Mallika’, ‘Sharda Bhog’, ‘Kesar’, and ‘Rataul’, and thirteen selected elite hybrids H-4208, H-3680, H-4505, H-3833, H-4504, H-1739, H-3623, H-1084, H-4264, HS-01, H-949, H-4065, and H-2805, is reported. The predominant effects that were observed include the following: burning symptoms or blackened tips, surrounded by a yellow halo, with premature ripening in affected parts and, in severe cases, tissue mummification. Among commercial cultivars, viz., ‘Amrapali’ (25%), ‘Mallika’ (30%), ‘Langra’ (30%), ‘Dashehari’ (50%), and ‘Himsagar’ and ‘Bombay Green’ had severe impacts, with ~80% of fruits being affected, followed by ‘Sharda Bhog’. In contrast, mid-maturing cultivars like ‘Kesar’, ‘Rataul’, and late-maturing elite hybrids, which were immature during the stress period, showed no symptoms, indicating they are tolerant. Biochemical analyses revealed significantly elevated total soluble solids (TSS > 25 °B) in affected areas of sensitive genotypes compared to non-affected tissues and tolerant genotypes. Aroma profiling indicated variations in compounds such as caryophyllene and humulene between affected and unaffected parts. The study envisages that the phenological maturity scales are indicators for the selection of climate-resilient mango varieties/hybrids and shows potential for future breeding programs. Full article
(This article belongs to the Special Issue Abiotic Stress Responses in Horticultural Crops)
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29 pages, 1517 KiB  
Review
Targeting Cytokine-Mediated Inflammation in Brain Disorders: Developing New Treatment Strategies
by Rahul Mallick, Sanjay Basak, Premanjali Chowdhury, Prasenjit Bhowmik, Ranjit K. Das, Antara Banerjee, Sujay Paul, Surajit Pathak and Asim K. Duttaroy
Pharmaceuticals 2025, 18(1), 104; https://doi.org/10.3390/ph18010104 - 15 Jan 2025
Cited by 9 | Viewed by 4058
Abstract
Cytokine-mediated inflammation is increasingly recognized for playing a vital role in the pathophysiology of a wide range of brain disorders, including neurodegenerative, psychiatric, and neurodevelopmental problems. Pro-inflammatory cytokines such as interleukin-1 (IL-1), tumor necrosis factor-alpha (TNF-α), and interleukin-6 (IL-6) cause neuroinflammation, alter brain [...] Read more.
Cytokine-mediated inflammation is increasingly recognized for playing a vital role in the pathophysiology of a wide range of brain disorders, including neurodegenerative, psychiatric, and neurodevelopmental problems. Pro-inflammatory cytokines such as interleukin-1 (IL-1), tumor necrosis factor-alpha (TNF-α), and interleukin-6 (IL-6) cause neuroinflammation, alter brain function, and accelerate disease development. Despite progress in understanding these pathways, effective medicines targeting brain inflammation are still limited. Traditional anti-inflammatory and immunomodulatory drugs are effective in peripheral inflammatory illnesses. Still, they face substantial hurdles when applied to the central nervous system (CNS), such as the blood–brain barrier (BBB) and unwanted systemic effects. This review highlights the developing treatment techniques for modifying cytokine-driven neuroinflammation, focusing on advances that selectively target critical cytokines involved in brain pathology. Novel approaches, including cytokine-specific inhibitors, antibody-based therapeutics, gene- and RNA-based interventions, and sophisticated drug delivery systems like nanoparticles, show promise with respect to lowering neuroinflammation with greater specificity and safety. Furthermore, developments in biomarker discoveries and neuroimaging techniques are improving our ability to monitor inflammatory responses, allowing for more accurate and personalized treatment regimens. Preclinical and clinical trial data demonstrate the therapeutic potential of these tailored techniques. However, significant challenges remain, such as improving delivery across the BBB and reducing off-target effects. As research advances, the creation of personalized, cytokine-centered therapeutics has the potential to alter the therapy landscape for brain illnesses, giving patients hope for better results and a higher quality of life. Full article
(This article belongs to the Special Issue Pharmacotherapy of Neurodegeneration Disorders)
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20 pages, 8123 KiB  
Article
Spatial Prediction of Soil Particle-Size Fractions Using Digital Soil Mapping in the North Eastern Region of India
by Roomesh Kumar Jena, Pravash Chandra Moharana, Subramanian Dharumarajan, Gulshan Kumar Sharma, Prasenjit Ray, Partha Deb Roy, Dibakar Ghosh, Bachaspati Das, Amnah Mohammed Alsuhaibani, Ahmed Gaber and Akbar Hossain
Land 2023, 12(7), 1295; https://doi.org/10.3390/land12071295 - 27 Jun 2023
Cited by 8 | Viewed by 2422
Abstract
Numerous applications in agriculture, climate, ecology, hydrology, and the environment are severely constrained by the lack of detailed information on soil texture. The purpose of this study was to predict soil particle-size fractions (PSF) in the Ri-Bhoi district of Meghalaya state, India, using [...] Read more.
Numerous applications in agriculture, climate, ecology, hydrology, and the environment are severely constrained by the lack of detailed information on soil texture. The purpose of this study was to predict soil particle-size fractions (PSF) in the Ri-Bhoi district of Meghalaya state, India, using a random forest model (RF). For the modeling of soil particle-size fractions, we employed 95 soil profiles (456 depth-wise layers) gathered from a recent national land resource inventory as well as currently accessible environmental variables. Sand, silt, and clay content were predicted using the Random Forest model at varied depths of 0–5, 5–15, 30–60, 60–100, and 100–200 cm. Our results showed the R2 for sand was found to be 0.30 (0–5 cm), 0.28 (5–15 cm), and 0.21 (15–30 cm). For the sand, silt, and clay fractions, respectively, the concordance correlation coefficient (CCC) was found to be greater in the 0–30 cm, 0–60 cm, and 0–15 cm depths. When there is a reasonably close monitoring of the coverage probability with a confidence level along the 1:1 line, prediction interval coverage probability (PICP) gives a decent indicator of what to anticipate. The most crucial variables for the prediction of sand and silt were channel network base level (CNBL) and LS-Factor, whereas Min Temperature of Coldest Month (°C) (BIO6) was discovered for clay prediction. For all three soil texture fractions, the range between the 5% lower and 95% higher prediction bounds was large, indicating that the existing spatial predictions may be improved. The maps of soil texture were significantly more precise, and they accurately depicted the spatial variations of particle-size fractions. Additionally, there is still a need to investigate novel methodologies for extensive digital soil mapping, which will be very advantageous for many international initiatives. Full article
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14 pages, 1191 KiB  
Article
Prognostic Relevance of PDL1 and CA19-9 Expression in Gallbladder Cancer vs. Inflammatory Lesions
by Neetu Rawal, Supriya Awasthi, Nihar Ranjan Dash, Sunil Kumar, Prasenjit Das, Amar Ranjan, Anita Chopra, Maroof Ahmad Khan, Sundeep Saluja, Showket Hussain and Pranay Tanwar
Curr. Oncol. 2023, 30(2), 1571-1584; https://doi.org/10.3390/curroncol30020121 - 25 Jan 2023
Cited by 5 | Viewed by 3081
Abstract
Chronic inflammation in the gallbladder leading to persistent epithelium damage promotes invasive cancer. The study aimed to assess the prognostic value of PDL1 and CA19-9 markers in cancer/inflammatory lesions of the gallbladder. A total of 29 cases (19 cancer and 10 inflammatory) were [...] Read more.
Chronic inflammation in the gallbladder leading to persistent epithelium damage promotes invasive cancer. The study aimed to assess the prognostic value of PDL1 and CA19-9 markers in cancer/inflammatory lesions of the gallbladder. A total of 29 cases (19 cancer and 10 inflammatory) were included. The PDL1 protein concentration level and mRNA expression were assessed in the tissues’ lysates by ELISA and real-time PCR, respectively. PDL1 and CA19-9 concentration levels were compared and statistically related with clinico-pathological variables. The PDL1 protein level and its relative mRNA expression were correlated. Kaplan–Meir survival and Cox regression analyses were conducted for predicting prognosis. This study investigated the PDL1 and CA19-9 marker expression in both cancer and inflammatory cases of the gallbladder (p = 0.48 and p = 0.17 respectively). PDL1 protein expression was significantly associated with the hormonal profile of the cases (p = 0.04) at an optimum cut-off value of 13 pg/mL, while the CA19-9 marker expression was correlated with the status of liver metastasis (p = 0.0043) and size of the tumor (p = 0.004). A low PDL1 concentration was found when compared to the CA19-9 level among cancer cases (p = 0.12) and proportional in the inflammatory lesions (p = 0.63). A significant positive correlation was found between the PDL1 protein and its relative mRNA expressions in the inflammatory lesions (p = 0.029) when compared to cancer cases (p = 0.069). Our results showed that a protein-based assay for PDL1 expression would be more sensitive compared to RNA based assays for GBC risk stratifications. Overall survival was predicted with CA19-9 and PDL1 levels (p = 0.0074, p = 0.23, respectively). PDL1 and CA19-9 may act as a probable predictor of a poor prognosis in gallbladder cancer (GBC) cases. Full article
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34 pages, 7754 KiB  
Review
Structure and Bonding in Planar Hypercoordinate Carbon Compounds
by Prasenjit Das and Pratim Kumar Chattaraj
Chemistry 2022, 4(4), 1723-1756; https://doi.org/10.3390/chemistry4040113 - 15 Dec 2022
Cited by 22 | Viewed by 7176
Abstract
The term hypercoordination refers to the extent of the coordination of an element by its normal value. In the hypercoordination sphere, the element can achieve planar and/or non-planar molecular shape. Hence, planar hypercoordinate carbon species violate two structural rules: (i) The highest coordination [...] Read more.
The term hypercoordination refers to the extent of the coordination of an element by its normal value. In the hypercoordination sphere, the element can achieve planar and/or non-planar molecular shape. Hence, planar hypercoordinate carbon species violate two structural rules: (i) The highest coordination number of carbon is four and (ii) the tetrahedral orientation by the connected elements and/or groups. The unusual planar orientations are mostly stabilized by the electronic interactions of the central atom with the surrounding ligands. In this review article, we will talk about the current progress in the theoretical prediction of viable planar hypercoordinate carbon compounds. Primary knowledge of the planar hypercoordinate chemistry will lead to its forthcoming expansion. Experimental and theoretical interests in planar tetracoordinate carbon (ptC), planar pentacoordinate carbon (ppC), and planar hexacoordinate carbon (phC) are continued. The proposed electronic and mechanical strategies are helpful for the designing of the ptC compounds. Moreover, the 18-valence electron rule can guide the design of new ptC clusters computationally as well as experimentally. However, the counting of 18-valence electrons is not a requisite condition to contain a ptC in a cluster. Furthermore, this ptC idea is expanded to the probability of a greater coordination number of carbon in planar orientations. Unfortunately, until now, there are no such logical approaches to designing ppC, phC, or higher-coordinate carbon molecules/ions. There exist a few global minimum structures of phC clusters identified computationally, but none have been detected experimentally. All planar hypercoordinate carbon species in the global minima may be feasible in the gas phase. Full article
(This article belongs to the Special Issue Hypercoordinate Carbon)
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14 pages, 2532 KiB  
Article
Gluten Induces Subtle Histological Changes in Duodenal Mucosa of Patients with Non-Coeliac Gluten Sensitivity: A Multicentre Study
by Kamran Rostami, Arzu Ensari, Michael N. Marsh, Amitabh Srivastava, Vincenzo Villanacci, Antonio Carroccio, Hamid Asadzadeh Aghdaei, Julio C. Bai, Gabrio Bassotti, Gabriel Becheanu, Phoenix Bell, Camillo Di Bella, Anna Maria Bozzola, Moris Cadei, Giovanni Casella, Carlo Catassi, Carolina Ciacci, Delia Gabriela Apostol Ciobanu, Simon S. Cross, Mihai Danciu, Prasenjit Das, Rachele Del Sordo, Michael Drage, Luca Elli, Alessio Fasano, Ada Maria Florena, Nicola Fusco, James J. Going, Stefano Guandalini, Catherine E. Hagen, David T. S. Hayman, Sauid Ishaq, Hilary Jericho, Melanie Johncilla, Matt Johnson, Katri Kaukinen, Adam Levene, Sarah Liptrot, Laura Lu, Govind K. Makharia, Sherly Mathews, Giuseppe Mazzarella, Roxana Maxim, Khun La Win Myint, Hamid Mohaghegh-Shalmani, Afshin Moradi, Chris J. J. Mulder, Ronnie Ray, Chiara Ricci, Mohammad Rostami-Nejad, Anna Sapone, David S. Sanders, Juha Taavela, Umberto Volta, Marjorie Walker and Mohammad Derakhshanadd Show full author list remove Hide full author list
Nutrients 2022, 14(12), 2487; https://doi.org/10.3390/nu14122487 - 15 Jun 2022
Cited by 28 | Viewed by 8772
Abstract
Background: Histological changes induced by gluten in the duodenal mucosa of patients with non-coeliac gluten sensitivity (NCGS) are poorly defined. Objectives: To evaluate the structural and inflammatory features of NCGS compared to controls and coeliac disease (CeD) with milder enteropathy (Marsh I-II). Methods: [...] Read more.
Background: Histological changes induced by gluten in the duodenal mucosa of patients with non-coeliac gluten sensitivity (NCGS) are poorly defined. Objectives: To evaluate the structural and inflammatory features of NCGS compared to controls and coeliac disease (CeD) with milder enteropathy (Marsh I-II). Methods: Well-oriented biopsies of 262 control cases with normal gastroscopy and histologic findings, 261 CeD, and 175 NCGS biopsies from 9 contributing countries were examined. Villus height (VH, in μm), crypt depth (CrD, in μm), villus-to-crypt ratios (VCR), IELs (intraepithelial lymphocytes/100 enterocytes), and other relevant histological, serologic, and demographic parameters were quantified. Results: The median VH in NCGS was significantly shorter (600, IQR: 400–705) than controls (900, IQR: 667–1112) (p < 0.001). NCGS patients with Marsh I-II had similar VH and VCR to CeD [465 µm (IQR: 390–620) vs. 427 µm (IQR: 348–569, p = 0·176)]. The VCR in NCGS with Marsh 0 was lower than controls (p < 0.001). The median IEL in NCGS with Marsh 0 was higher than controls (23.0 vs. 13.7, p < 0.001). To distinguish Marsh 0 NCGS from controls, an IEL cut-off of 14 showed 79% sensitivity and 55% specificity. IEL densities in Marsh I-II NCGS and CeD groups were similar. Conclusion: NCGS duodenal mucosa exhibits distinctive changes consistent with an intestinal response to luminal antigens, even at the Marsh 0 stage of villus architecture. Full article
(This article belongs to the Section Clinical Nutrition)
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24 pages, 5238 KiB  
Article
Geospatial Modelling for Delineation of Crop Management Zones Using Local Terrain Attributes and Soil Properties
by Roomesh Kumar Jena, Siladitya Bandyopadhyay, Upendra Kumar Pradhan, Pravash Chandra Moharana, Nirmal Kumar, Gulshan Kumar Sharma, Partha Deb Roy, Dibakar Ghosh, Prasenjit Ray, Shelton Padua, Sundaram Ramachandran, Bachaspati Das, Surendra Kumar Singh, Sanjay Kumar Ray, Amnah Mohammed Alsuhaibani, Ahmed Gaber and Akbar Hossain
Remote Sens. 2022, 14(9), 2101; https://doi.org/10.3390/rs14092101 - 27 Apr 2022
Cited by 17 | Viewed by 3548
Abstract
Defining nutrient management zones (MZs) is crucial for the implementation of site-specific management. The determination of MZs is based on several factors, including crop, soil, climate, and terrain characteristics. This study aims to delineate MZs by means of geostatistical and fuzzy clustering algorithms [...] Read more.
Defining nutrient management zones (MZs) is crucial for the implementation of site-specific management. The determination of MZs is based on several factors, including crop, soil, climate, and terrain characteristics. This study aims to delineate MZs by means of geostatistical and fuzzy clustering algorithms considering remotely sensed and laboratory data and, subsequently, to compare the zone maps in the north-eastern Himalayan region of India. For this study, 896 grid-wise representative soil samples (0–25 cm depth) were collected from the study area (1615 km2). The soils were analysed for soil reaction (pH), soil organic carbon and available macro (N, P and K) and micronutrients (Fe, Mn, Zn and Cu). The predicted soil maps were developed using regression kriging, where 28 digital elevation model-derived terrain attributes and two vegetation derivatives were used as environmental covariates. The coefficient of determination (R2) and root mean square error were used to evaluate the model’s performance. The predicted soil parameters were accurate, and regression kriging identified the highest variability for the majority of the soil variables. Further, to define the management zones, the geographically weighted principal component analysis and possibilistic fuzzy c-means clustering method were employed, based on which the optimum clusters were identified by employing fuzzy performance index and normalized classification entropy. The management zones were constructed considering the total pixel points of 30 m spatial resolution (17, 86,985 data points). The area was divided into four distinct zones, which could be differently managed. MZ 1 covers the maximum (43.3%), followed by MZ 2 (29.4%), MZ 3 (27.0%) and MZ 4 (0.3%). The MZs map thus would not only serve as a guide for judicious location-specific nutrient management, but would also help the policymakers to bring sustainable changes in the north-eastern Himalayan region of India. Full article
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15 pages, 84547 KiB  
Article
In Silico Studies on Selected Neutral Molecules, CGa2Ge2, CAlGaGe2, and CSiGa2Ge Containing Planar Tetracoordinate Carbon
by Prasenjit Das and Pratim Kumar Chattaraj
Atoms 2021, 9(3), 65; https://doi.org/10.3390/atoms9030065 - 10 Sep 2021
Cited by 18 | Viewed by 3780
Abstract
Density functional theory (DFT) was used to study the structure, stability, and bonding in some selected neutral pentaatomic systems, viz., CGa2Ge2, CAlGaGe2, and CSiGa2Ge containing planar tetracoordinate carbon. The systems are kinetically stable, as [...] Read more.
Density functional theory (DFT) was used to study the structure, stability, and bonding in some selected neutral pentaatomic systems, viz., CGa2Ge2, CAlGaGe2, and CSiGa2Ge containing planar tetracoordinate carbon. The systems are kinetically stable, as predicted from the ab initio molecular dynamics simulations. The natural bond orbital (NBO) analysis showed that strong electron donation occurs to the central planar carbon atom by the peripheral atoms in all the studied systems. From the nucleus independent chemical shift (NICS) analysis, it is shown that the systems possess both σ- and π- aromaticity. The presence of 18 valence electrons in these systems, in their neutral form, appears to be important for their stability with planar geometries rather than tetrahedral structures. The nature of bonding is understood through the adaptive natural density partitioning analysis (AdNDP), quantum theory of atoms in molecules (QTAIM) analysis, and also via Wiberg bond index (WBI) and electron localization function (ELF). Full article
(This article belongs to the Special Issue Planar Tetracoordinate Carbon—Fifty Years and Beyond)
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15 pages, 1963 KiB  
Article
Understanding the Coupling Effect between Lignin and Polybutadiene Elastomer
by Sakrit Hait, Debapriya De, Prasenjit Ghosh, Jagannath Chanda, Rabindra Mukhopadhyay, Saikat Dasgupta, Aladdin Sallat, Muhannad Al Aiti, Klaus Werner Stöckelhuber, Sven Wießner, Gert Heinrich and Amit Das
J. Compos. Sci. 2021, 5(6), 154; https://doi.org/10.3390/jcs5060154 - 8 Jun 2021
Cited by 17 | Viewed by 3678
Abstract
From an environmental and economic viewpoint, it is a win–win strategy to use materials obtained from renewable resources for the production of high-performance elastomer composites. Lignin, being a renewable biomass, was employed as a functional filler material to obtain an elastomer composite with [...] Read more.
From an environmental and economic viewpoint, it is a win–win strategy to use materials obtained from renewable resources for the production of high-performance elastomer composites. Lignin, being a renewable biomass, was employed as a functional filler material to obtain an elastomer composite with a higher degree of mechanical performance. In the presence of a suitable coupling agent, an elevated temperature was preferred for the reactive mixing of lignin with polybutadiene rubber (BR). It is quite fascinating that the mechanical performance of this composite was comparable with carbon black-filled composites. The extraordinary reinforcing behavior of lignin in the BR matrix was understood by an available model of rubber reinforcement. In rubber composite preparation, the interfacial interaction between polybutadiene rubber and lignin in the presence of a coupling agent enabled the efficient dispersion of lignin into the rubber matrix, which is responsible for the excellent mechanical properties of the rubber composites. The rubber composites thus obtained may lead to the development of a sustainable and cost-effective end product with reliable performance. This novel approach could be implemented in other type of elastomeric materials, enabling a genuine pathway toward a sustainable globe. Full article
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17 pages, 5718 KiB  
Article
Morphology and Physico-Mechanical Threshold of α-Cellulose as Filler in an E-SBR Composite
by Soumya Ghosh Chowdhury, Jagannath Chanda, Sreedip Ghosh, Abhijit Pal, Prasenjit Ghosh, Sanjay Kumar Bhattacharyya, Rabindra Mukhopadhyay, Shib Shankar Banerjee and Amit Das
Molecules 2021, 26(3), 694; https://doi.org/10.3390/molecules26030694 - 28 Jan 2021
Cited by 13 | Viewed by 2909
Abstract
In the current context of green mobility and sustainability, the use of new generation natural fillers, namely, α-cellulose, has gained significant recognition. The presence of hydroxyl groups on α-cellulose has generated immense eagerness to map its potency as filler in an elastomeric composite. [...] Read more.
In the current context of green mobility and sustainability, the use of new generation natural fillers, namely, α-cellulose, has gained significant recognition. The presence of hydroxyl groups on α-cellulose has generated immense eagerness to map its potency as filler in an elastomeric composite. In the present work, α-cellulose-emulsion-grade styrene butadiene rubber (E-SBR) composite is prepared by conventional rubber processing method by using variable proportions of α-cellulose (1 to 40 phr) to assess its reinforce ability. Rheological, physical, visco-elastic and dynamic-mechanical behavior have clearly established that 10 phr loading of α-cellulose can be considered as an optimized dosage in terms of performance parameters. Morphological characterization with the aid of scanning electron microscope (SEM) and transmission electron microscopy (TEM) also substantiated that composite with 10 phr loading of α-cellulose has achieved the morphological threshold. With this background, synthetic filler (silica) is substituted by green filler (α-cellulose) in an E-SBR-based composite. Characterization of the compound has clearly established the reinforcement ability of α-cellulose. Full article
(This article belongs to the Special Issue Lignocellulosic Materials)
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