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Search Results (11)

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Authors = Andrea Giammanco ORCID = 0000-0001-9640-8294

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20 pages, 1548 KiB  
Article
Optimisation of Muon Tomography Scanners for Border Control Using TomOpt
by Zahraa Zaher, Samuel Alvarez, Tommaso Dorigo, Andrea Giammanco, Maxime Lagrange, Giles C. Strong, Pietro Vischia and Haitham Zaraket
Particles 2025, 8(2), 53; https://doi.org/10.3390/particles8020053 - 1 May 2025
Viewed by 1366
Abstract
The TomOpt software package is designed to optimise the geometric configuration and the specifications of detectors intended for muon scattering tomography, an imaging technique exploiting cosmic-ray muons. The software employs an end-to-end differentiable pipeline that models the interactions of muons with detectors and [...] Read more.
The TomOpt software package is designed to optimise the geometric configuration and the specifications of detectors intended for muon scattering tomography, an imaging technique exploiting cosmic-ray muons. The software employs an end-to-end differentiable pipeline that models the interactions of muons with detectors and scanned volumes, infers properties of the scanned materials, and performs an optimisation cycle minimising a user-defined loss function. This article presents the implementation of a case study related to cargo scanning applications in the context of homeland security. Full article
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16 pages, 558 KiB  
Article
The Influence of the Seasonal Variability of Candida spp. Bloodstream Infections and Antifungal Treatment: A Mediterranean Pilot Study
by Paola Di Carlo, Nicola Serra, Ornella Collotta, Claudia Colomba, Alberto Firenze, Luigi Aprea, Salvatore Antonino Distefano, Andrea Cortegiani, Giovanni Giammanco, Teresa Maria Assunta Fasciana, Roberta Virruso, Angela Capuano, Consolato M. Sergi and Antonio Cascio
Antibiotics 2025, 14(5), 452; https://doi.org/10.3390/antibiotics14050452 - 29 Apr 2025
Viewed by 779
Abstract
Background/Objectives: Various factors associated with seasonality, including temperature, humidity, geographical composition, and seasonal fluctuations, can influence the trends of microbes responsible for hospital infections, such as Candida spp. This study evaluates the seasonal variability of Candida spp. bloodstream infections and antifungal resistance [...] Read more.
Background/Objectives: Various factors associated with seasonality, including temperature, humidity, geographical composition, and seasonal fluctuations, can influence the trends of microbes responsible for hospital infections, such as Candida spp. This study evaluates the seasonal variability of Candida spp. bloodstream infections and antifungal resistance in hospitalized patients in Sicily. Methods: We retrospectively analyzed the demographic and epidemiological characteristics of 175 patients with blood cultures positive for Candida spp. Who were hospitalized at University Hospital Paolo Giaccone (A.U.O.P.), University of Palermo, Italy, from 1 January 2022 to 31 December 2024. Data on Candida species and antifungal resistance were also collected from the hospital’s database system to prevent and control hospital infections in A.U.O.P. Results: A total of 175 patients, 57.7% males, with a mean age of 68.3 years, were included in this study. Candida parapsilosis, Candida albicans, and Candida glabrata were more frequent in ICU (54.5%, p = 0.0001), medical (72.5%, p = 0.0003), and surgical settings (24%, p = 0.0161), respectively. C. parapsilosis was more frequent in dead patients (53.2%, p = 0.005). Among the seasons, we observed a significantly higher presence of C. glabrata in Autumn (20%, p = 0.0436). From the analysis of the seasons, C. parapsilosis and C. albicans were more frequent for each season, except in Spring, where the most frequent isolates were C. glabrata (5.1%, p = 0.0237) and C. parapsilosis (9.7%, p < 0.0001). The antifungal with the most resistance to Candida spp. was fluconazole in all seasons. Conclusions: Our study highlights the seasonal trends in Candida spp. and antifungal resistance, emphasizing climate change’s challenges on fungal diseases. These findings may contribute to improving prevention and treatment strategies for candidemia. Full article
(This article belongs to the Special Issue Climate Change and Antibiotic Resistance)
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18 pages, 11301 KiB  
Article
Indoor Radon Monitoring and Associated Diffuse Radon Emissions in the Flanks of Mt. Etna (Italy)
by Nunzia Voltattorni, Salvatore Giammanco, Gianfranco Galli, Andrea Gasparini and Marco Neri
Atmosphere 2024, 15(11), 1359; https://doi.org/10.3390/atmos15111359 - 12 Nov 2024
Cited by 1 | Viewed by 4294
Abstract
Between October 2021 and July 2024, radon measurements in air and soil were carried out in the South and East flanks of Etna volcano to check the possible correlation between radon emissions and active faults/eruptive fissures and to obtain preliminary data on any [...] Read more.
Between October 2021 and July 2024, radon measurements in air and soil were carried out in the South and East flanks of Etna volcano to check the possible correlation between radon emissions and active faults/eruptive fissures and to obtain preliminary data on any negative impacts on human health. Fifteen continuous indoor radon monitors were installed in homes, some of which are inhabited by patients suffering from Multiple Sclerosis and Amyotrophic Lateral Sclerosis. In all sites, the limit of 300 Bq/m3 indicated by the Euratom Directive 2013/59 was exceeded, even if slightly and for short periods. The highest values were recorded closest to active fault zones and during winters. Furthermore, 27 discrete indoor radon measurements were carried out using a passive method by means of activated charcoal canisters that were exposed for 48 h. Most of the values (>70%) were <100 Bq/m3; six canisters gave values >100 Bq/m3 and one >200 Bq/m3. Measurements of radon in soils were carried out using a Durridge RAD7 in the gardens of the homes in which the indoor radon measurements were made. The background radon values in soils were <5000 Bq/m3; the highest values (12,500 Bq/m3) were measured near the Aci Catena fault. The role of Etna’s faults in draining the deeper radon towards the surface and, therefore, into nearby homes is evident, with a consequent increase in the health risk caused by indoor radon pollution. Full article
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9 pages, 622 KiB  
Article
Evaluation of T2 Magnetic Resonance (T2MR®) Technology for the Early Detection of ESKAPEc Pathogens in Septic Patients
by Celestino Bonura, Domenico Graceffa, Salvatore Distefano, Simona De Grazia, Oscar Guzman, Brian Bohn, Mariachiara Ippolito, Salvatore Campanella, Angelica Ancona, Marta Caputo, Pietro Mirasola, Cesira Palmeri, Santi Maurizio Raineri, Antonino Giarratano, Giovanni Maurizio Giammanco and Andrea Cortegiani
Antibiotics 2024, 13(9), 885; https://doi.org/10.3390/antibiotics13090885 - 14 Sep 2024
Cited by 1 | Viewed by 1741
Abstract
Bloodstream infections (BSIs) and sepsis are a major cause of morbidity and mortality. Appropriate early antibiotic therapy is crucial for improving the survival of patients with sepsis and septic shock. T2 magnetic resonance (T2MR®) technology may enable fast and sensitive detection [...] Read more.
Bloodstream infections (BSIs) and sepsis are a major cause of morbidity and mortality. Appropriate early antibiotic therapy is crucial for improving the survival of patients with sepsis and septic shock. T2 magnetic resonance (T2MR®) technology may enable fast and sensitive detection of ESKAPEc pathogens directly from whole-blood samples. We aimed to evaluate concordance between the T2Bacteria® Panel and standard blood culture and its impact on antibiotic therapy decisions. We conducted a single-centre retrospective study on patients with sepsis-induced hypotension or septic shock admitted to general, post-operative/neurosurgical, and cardiothoracic Intensive Care Units who were tested with the T2Bacteria® Panel from January 2021 to December 2022. Eighty-five consecutively admitted patients were included, for a total of 85 paired tests. A total of 48 ESKAPEc pathogens were identified by the T2Bacteria® Panel. The concordance rate between the T2Bacteria® Panel and blood cultures was 81% (69/85), with 20 concordant-positive and 49 concordant-negative cases. For the 25 microorganisms grown from accompanying blood cultures, blood pathogen coverage by the T2Bacteria® Panel was 88%. In this cohort of severely ill septic patients, the T2Bacteria® Panel was highly concordant and was able to detect more ESKAPEc pathogens, with a significantly shorter turn-around time compared to conventional blood cultures. The T2Bacteria® Panel also significantly impacted decisions on antibiotic therapy. Full article
(This article belongs to the Special Issue Infections and Sepsis in the Intensive Care Unit)
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17 pages, 1337 KiB  
Article
Re-Thinking the Environment, Cities, and Living Spaces for Public Health Purposes, According with the COVID-19 Lesson: The LVII Erice Charter
by Daniela D’Alessandro, Andrea Rebecchi, Letizia Appolloni, Andrea Brambilla, Silvio Brusaferro, Maddalena Buffoli, Maurizio Carta, Alessandra Casuccio, Liliana Coppola, Maria Vittoria Corazza, Roberto D’Elia, Marta Dell’Ovo, Marco Dettori, Gaetano Maria Fara, Margherita Ferrante, Giuseppe Giammanco, Marco Gola, Davide Gori, Andrea Lauria, Erica Isa Mosca, Iveta Nagyova, Marisa Raffo, Carlo Signorelli, Chiara Spinato, Tianzhi Sun, Francesco Vitale, Stefano Capolongo and on behalf of the Attendees of the LVII Course “Re-Think Cities and Living Spaces for Public Health Purposes, according with the COVID-19 Lesson” of the School of Epidemiology and Preventive Medicine “Giuseppe D’Alessandro”, Ettore Majorana Foundation and add Show full author list remove Hide full author list
Land 2023, 12(10), 1863; https://doi.org/10.3390/land12101863 - 29 Sep 2023
Cited by 5 | Viewed by 1861
Abstract
Background. Urban planning is a key tool to promote health in cities. The COVID-19 emergency accelerated several social, environmental, and digital challenges, stressing the importance of some issues regarding housing, urban mobility, green areas, and health service networks, urban health policies, and actions. [...] Read more.
Background. Urban planning is a key tool to promote health in cities. The COVID-19 emergency accelerated several social, environmental, and digital challenges, stressing the importance of some issues regarding housing, urban mobility, green areas, and health service networks, urban health policies, and actions. These issues were the subject of an intensive residential course (the 57th) held in Erice, Sicily, in June 2021 in the “International School of Epidemiology and Preventive Medicine G. D’Alessandro”, and the main findings are described here. Methods. Lectures presented the topics, subsequently developed them, and argued them in parallel practical sessions using the World Café technique, since it is well suited for the interaction of participants and the involvement of groups. Results. The World Café provides new insights into how to improve the livability and health of urban spaces, and a set of strategies and actions were proposed for each topic. Discussion and Conclusions. All attendees agreed on the importance of participation in the planning processes, but also on the need for strong political support to ensure the resources needed and a full integration of health with other local policies. A multidisciplinary approach to developing systemic operational capacities and health literacy is considered pivotal to raising awareness and participation. Full article
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2 pages, 422 KiB  
Correction
Correction: Topuz et al. DOME: Discrete Oriented Muon Emission in GEANT4 Simulations. Instruments 2022, 6, 42
by Ahmet Ilker Topuz, Madis Kiisk and Andrea Giammanco
Instruments 2023, 7(4), 31; https://doi.org/10.3390/instruments7040031 - 27 Sep 2023
Viewed by 1195
Abstract
In the original publication [...] Full article
(This article belongs to the Special Issue Muography, Applications in Cosmic-Ray Muon Imaging)
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36 pages, 4043 KiB  
Review
Cosmic-Ray Tomography for Border Security
by Sarah Barnes, Anzori Georgadze, Andrea Giammanco, Madis Kiisk, Vitaly A. Kudryavtsev, Maxime Lagrange and Olin Lyod Pinto
Instruments 2023, 7(1), 13; https://doi.org/10.3390/instruments7010013 - 20 Mar 2023
Cited by 23 | Viewed by 11006
Abstract
A key task for customs workers is the interception of hazardous, illegal and counterfeit items in order to protect the health and safety of citizens. However, it is estimated that only a small fraction of cargo is inspected and an even smaller fraction [...] Read more.
A key task for customs workers is the interception of hazardous, illegal and counterfeit items in order to protect the health and safety of citizens. However, it is estimated that only a small fraction of cargo is inspected and an even smaller fraction of trafficked goods are detected. Today, the most widely used technology for scanning vehicles, ranging from vans and trucks to railcars, is γ ray and X-ray radiography. New technologies are required to overcome current technological shortcomings, such as the inability to detect the target material composition, the usage of harmful ionising radiation sources and the resultant low throughput. Cosmic ray tomography (CRT) is a promising technology for cargo screening. Cosmic ray muons have average energies of around 10,000 times larger than a typical X-ray and therefore can penetrate relatively large and dense materials. By analysing muon scattering, it is possible to identify materials hidden inside shielding that is too thick or deep for other imaging methods. CRT is also completely passive, exploiting naturally occurring secondary cosmic radiation, and is therefore safe for humans and animals. Contrary to conventional X-ray- or γ-ray-based imaging techniques, CRT also allows material differentiation and anomaly localisation within the cargo or vehicle through the provision of 3D images. This article reviews the current state-of-the-art technology in CRT, critically assessing the strengths and weaknesses of the method, and suggesting further directions for development. Full article
(This article belongs to the Special Issue Muography, Applications in Cosmic-Ray Muon Imaging)
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11 pages, 843 KiB  
Article
A Comparison of Neural Networks and Center of Gravity in Muon Hit Position Estimation
by Kadir Aktas, Madis Kiisk, Andrea Giammanco, Gholamreza Anbarjafari and Märt Mägi
Entropy 2022, 24(11), 1659; https://doi.org/10.3390/e24111659 - 15 Nov 2022
Cited by 3 | Viewed by 2078
Abstract
The performance of cosmic-ray tomography systems is largely determined by their tracking accuracy. With conventional scintillation detector technology, good precision can be achieved with a small pitch between the elements of the detector array. Improving the resolution implies increasing the number of read-out [...] Read more.
The performance of cosmic-ray tomography systems is largely determined by their tracking accuracy. With conventional scintillation detector technology, good precision can be achieved with a small pitch between the elements of the detector array. Improving the resolution implies increasing the number of read-out channels, which in turn increases the complexity and cost of the tracking detectors. As an alternative to that, a scintillation plate detector coupled with multiple silicon photomultipliers could be used as a technically simple solution. In this paper, we present a comparison between two deep-learning-based methods and a conventional Center of Gravity (CoG) algorithm, used to calculate cosmic-ray muon hit positions on the plate detector using the signals from the photomultipliers. In this study, we generated a dataset of muon hits on a detector plate using the Monte Carlo simulation toolkit GEANT4. We demonstrate that two deep-learning-based methods outperform the conventional CoG algorithm by a significant margin. Our proposed algorithm, Fully Connected Network, produces a 0.72 mm average error measured in Euclidean distance between the actual and predicted hit coordinates, showing great improvement in comparison with CoG, which yields 1.41 mm on the same dataset. Additionally, we investigated the effects of different sensor configurations on performance. Full article
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8 pages, 509 KiB  
Article
DOME: Discrete Oriented Muon Emission in GEANT4 Simulations
by Ahmet Ilker Topuz, Madis Kiisk and Andrea Giammanco
Instruments 2022, 6(3), 42; https://doi.org/10.3390/instruments6030042 - 15 Sep 2022
Cited by 1 | Viewed by 3516 | Correction
Abstract
The simulation of muon tomography requires a multi-directional particle source that traverses a number of horizontal detectors of limited angular acceptance that are used to track cosmic-ray muons. In this study, we describe a simple strategy that can use GEANT4 simulations to produce [...] Read more.
The simulation of muon tomography requires a multi-directional particle source that traverses a number of horizontal detectors of limited angular acceptance that are used to track cosmic-ray muons. In this study, we describe a simple strategy that can use GEANT4 simulations to produce a hemispherical particle source. We initially generate random points on a spherical surface of practical radius by using a Gaussian distribution for the three components of the Cartesian coordinates, thereby obtaining a generating surface for the initial position of the particles to be tracked. Since we do not require the bottom half of the sphere, we take the absolute value of the vertical coordinate, resulting in a hemisphere. Next, we direct the generated particles into the target body by selectively favoring the momentum direction along the vector constructed between a random point on the hemispherical surface and the origin of the target, thereby minimizing particle loss through source biasing. We also discuss a second scheme where the coordinate transformation is performed between the spherical and Cartesian coordinates, and the above-source biasing procedure is applied to orient the generated muons towards the target. Finally, a recipe based on restrictive planes from our previous study is discussed. We implement our strategies by using G4ParticleGun in the GEANT4 code. While we apply these techniques to simulations for muon tomography via scattering, these source schemes can be applied to similar studies for atmospheric sciences, space engineering, and astrophysics where a 3D particle source is a necessity. Full article
(This article belongs to the Special Issue Muography, Applications in Cosmic-Ray Muon Imaging)
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8 pages, 2103 KiB  
Communication
Draft Genome Sequence and Biofilm Production of a Carbapenemase-Producing Klebsiella pneumoniae (KpR405) Sequence Type 405 Strain Isolated in Italy
by Teresa Fasciana, Andrea Ciammaruconi, Bernardina Gentile, Paola Di Carlo, Roberta Virruso, Maria Rita Tricoli, Daniela Maria Palma, Giovanna Laura Pitarresi, Florigio Lista and Anna Giammanco
Antibiotics 2021, 10(5), 560; https://doi.org/10.3390/antibiotics10050560 - 11 May 2021
Cited by 13 | Viewed by 2428
Abstract
Rapid identification and characterization of multidrug-resistant Klebsiella pneumoniae strains is essential to diagnose severe infections in patients. In clinical routine practice, K. pneumoniae is frequently identified and characterized for outbreak investigation. Pulsed-field gel electrophoresis or multilocus sequence typing could be used, but, unfortunately, [...] Read more.
Rapid identification and characterization of multidrug-resistant Klebsiella pneumoniae strains is essential to diagnose severe infections in patients. In clinical routine practice, K. pneumoniae is frequently identified and characterized for outbreak investigation. Pulsed-field gel electrophoresis or multilocus sequence typing could be used, but, unfortunately, these methods are time-consuming, laborious, expensive, and do not provide any information about the presence of resistance and virulence genes. In recent years, the decreasing cost of next-generation sequencing and its easy use have led to it being considered a useful method, not only for outbreak surveillance but also for rapid identification and evaluation, in a single step, of virulence factors and resistance genes. Carbapenem-resistant strains of K. pneumoniae have become endemic in Italy, and in these strains the ability to form biofilms, communities of bacteria fixed in an extracellular matrix, can defend the pathogen from the host immune response as well as from antibiotics, improving its persistence in epithelial tissues and on medical device surfaces. Full article
(This article belongs to the Special Issue Spread of Multidrug-Resistant Microorganisms )
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14 pages, 528 KiB  
Review
Candida auris: An Overview of How to Screen, Detect, Test and Control This Emerging Pathogen
by Teresa Fasciana, Andrea Cortegiani, Mariachiara Ippolito, Antonino Giarratano, Orazia Di Quattro, Dario Lipari, Domenico Graceffa and Anna Giammanco
Antibiotics 2020, 9(11), 778; https://doi.org/10.3390/antibiotics9110778 - 5 Nov 2020
Cited by 46 | Viewed by 9839
Abstract
The multidrug-resistant yeast Candida auris is associated with invasive infections in critically ill patients and has been isolated in different countries worldwide. Ease of spread, prolonged persistence in the environment and antifungal drug resistance pose a significant concern for the prevention of transmission [...] Read more.
The multidrug-resistant yeast Candida auris is associated with invasive infections in critically ill patients and has been isolated in different countries worldwide. Ease of spread, prolonged persistence in the environment and antifungal drug resistance pose a significant concern for the prevention of transmission and management of patients with C. auris infections. Early and correct identification of patients colonized with C. auris is critical in containing its spread. However, this may be complicated by C. auris strains being misidentified as other phylogenetically related pathogens. In this review, we offer a brief overview highlighting some of the critical aspects of sample collection, laboratory culture-dependent and independent identification and the susceptibility profile of C. auris. Full article
(This article belongs to the Special Issue Diagnosis,Resistance and Treatment of Infections by Candida auris)
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