Numerical Study of a Confined Vesicle in Shear Flow at Finite Temperature
Abstract
1. Introduction
2. The Model
3. Results
4. Discussion
5. Conclusions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
Appendix A
- All the solvent particles are streamed according to Equation (1). Particles crossing walls undergo bounce-back collisions changing their velocities as where and are the wall velocities with .
- The solvent particles and the beads which overlap, are looked for and their velocities are modified according to Equation (8).
- Galilean invariance is violated when the mean-free path l is much smaller than the cell size a. To restore the Galilean invariance [50], all the fluid particles are moved by a random vector as . The components of this random vector are drawn from a uniform distribution in the interval .
- All solvent particles are sorted in respective cells and cell-level quantities are calculated.
- The velocities of fluid particles not scattering with the vesicle, are updated according to Equation (2). The virtual particles are assigned a new random velocity.
- All fluid particles are shifted back to their original position as .
References
- Vlahovska, P.M.; Podgorski, T.; Misbah, C. Vesicles and red blood cells: From individual dynamics to rheology. C. R. Phys. 2009, 10, 775. [Google Scholar] [CrossRef] [Scilit]
- Abreu, D.; Levant, M.; Steinberg, V.; Seifert, U. Fluid vesicles in flow. Adv. Colloid Interface Sci. 2014, 208, 129. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Winkler, R.G.; Fedosov, D.A.; Gompper, G. Dynamical and rheological properties of soft colloid suspensions. Curr. Opin. Colloid Interface Sci. 2014, 19, 594. [Google Scholar]
- Barthès-Biesel, D. Motion and deformation of elastic capsules and vesicles in flow. Annu. Rev. Fluid Mech. 2016, 48, 25. [Google Scholar] [CrossRef] [Scilit]
- Keller, S.R.; Skalak, R. Motion of a tank-treading ellipsoidal particle in a shear flow. J. Fluid. Mech. 1982, 120, 27. [Google Scholar] [CrossRef] [Scilit]
- Noguchi, H.; Gompper, G. Fluid vesicles with viscous membranes in shear flow. Phys. Rev. Lett. 2004, 93, 258102. [Google Scholar] [CrossRef] [Scilit]
- Noguchi, H.; Gompper, G. Dynamics of fluid vesicles in shear flow: Effect of membrane viscosity and thermal fluctuations. Phys. Rev. E 2005, 72, 011901. [Google Scholar] [CrossRef] [Scilit]
- Kantsler, V.; Steinberg, V. Orientation and dynamics of a vesicle in tank-treading motion in shear flow. Phys. Rev. Lett. 2005, 95, 258101. [Google Scholar] [CrossRef] [Scilit]
- Kantsler, V.; Steinberg, V. Transition to tumbling and two regimes of tumbling motion of a vesicle in shear flow. Phys. Rev. Lett. 2006, 96, 036001. [Google Scholar] [CrossRef] [Scilit]
- Misbah, C. Vacillating breathing and tumbling of vesicles under shear flow. Phys. Rev. Lett. 2006, 96, 028104. [Google Scholar] [CrossRef] [Scilit]
- Noguchi, H.; Gompper, G. Swinging and tumbling of fluid vesicles in shear flow. Phys. Rev. Lett. 2007, 98, 128103. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lebedev, V.V.; Turitsyn, K.S.; Vergeles, S.S. Dynamics of nearly spherical vesicles in an external flow. Phys. Rev. Lett. 2007, 99, 218101. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Vlahovska, P.M.; Gracia, R.S. Dynamics of a viscous vesicle in linear flows. Phys. Rev. E 2007, 75, 016313. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Messlinger, S.; Schmidt, B.; Noguchi, H.; Gompper, G. Dynamical regimes and hydrodynamic lift of viscous vesicles under shear. Phys. Rev. E 2009, 80, 011901. [Google Scholar] [CrossRef] [Scilit]
- Zhao, H.; Shaqfeh, E.S.G. The dynamics of a vesicle in simple shear flow. J. Fluid Mech. 2011, 674, 578. [Google Scholar] [CrossRef] [Scilit]
- Danker, G.; Misbah, C. Rheology of a dilute suspension of vesicles. Phys. Rev. Lett. 2007, 98, 088104. [Google Scholar] [CrossRef] [Scilit]
- Danker, G.; Biben, T.; Podgorski, T.; Verdier, C.; Misbah, C. Dynamics and rheology of a dilute suspension of vesicles: Higher-order theory. Phys. Rev. E 2007, 76, 041905. [Google Scholar] [CrossRef] [Scilit]
- Vitkova, V.; Mader, M.A.; Polack, B.; Misbah, C.; Podgorski, T. Micro-macro link in rheology of erythrocyte and vesicle suspensions. Biophys. J. 2008, 95, L33. [Google Scholar] [CrossRef] [Scilit]
- Kantsler, V.; Segre, E.; Steinberg, V. Dynamics of interacting vesicles and rheology of vesicle suspension in shear flow. EPL 2008, 82, 58005. [Google Scholar] [CrossRef] [Scilit]
- Ghigliotti, G.; Biben, T.; Misbah, C. Rheology of a dilute two-dimensional suspension of vesicles. J. Fluid Mech. 2010, 653, 489. [Google Scholar] [CrossRef] [Scilit]
- Kaoui, B.; Jonk, R.J.W.; Harting, J. Interplay between microdynamics and macrorheology in vesicle suspensions. Soft Matter 2014, 10, 4735. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Nait-Ouhra, A.; Farutin, A.; Ez-Zahraouy, H.; Benyoussef, A.; Misbah, C. Rheology of a confined vesicle suspension. Phys. Rev. Fluids 2019, 4, 103602. [Google Scholar] [CrossRef] [Scilit]
- Thiébaud, M.; Misbah, C. Rheology of a vesicle suspension with finite concentration: A numerical study. Phys. Rev. E 2013, 88, 062707. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Rahimian, A.; Veerapaneni, S.K.; Biros, G. Dynamic simulation of locally inextensible vesicles suspended in an arbitrary two-dimensional domain, a boundary integral method. J. Comput. Phys. 2010, 229, 6466. [Google Scholar] [CrossRef] [Scilit]
- Zhao, H.; Shaqfeh, E. The dynamics of a non-dilute vesicle suspension in a simple shear flow. J. Fluid Mech. 2013, 725, 709. [Google Scholar] [CrossRef] [Scilit]
- Lamura, A.; Gompper, G. Dynamics and rheology of vesicle suspensions in wall-bounded shear flow. EPL 2013, 102, 28004. [Google Scholar] [CrossRef] [Scilit]
- Afik, A.; Lamura, A.; Steinberg, V. Long-range hydrodynamic effect due to a single vesicle in linear flow. EPL 2016, 113, 38003. [Google Scholar] [CrossRef] [Scilit]
- Malevanets, A.; Kapral, R. Mesoscopic model for solvent dynamics. J. Chem. Phys. 1999, 110, 8605. [Google Scholar] [CrossRef] [Scilit]
- Malevanets, A.; Kapral, R. Solute molecular dynamics in a mesoscale solvent. J. Chem. Phys. 2000, 112, 7260. [Google Scholar] [CrossRef] [Scilit]
- Kapral, R. Multiparticle Collision Dynamics: Simulation of Complex Systems on Mesoscales. Adv. Chem. Phys. 2008, 140, 89. [Google Scholar]
- Gompper, G.; Ihle, T.; Kroll, D.M.; Winkler, R.G. Multi-Particle Collision Dynamics: A Particle-Based Mesoscale Simulation Approach to the Hydrodynamics of Complex Fluids. Adv. Polym. Sci. 2009, 221, 1. [Google Scholar]
- Noguchi, H.; Kikuchi, N.; Gompper, G. Particle-based mesoscale hydrodynamic techniques. Europhys. Lett. 2007, 78, 10005. [Google Scholar] [CrossRef] [Scilit]
- Götze, I.O.; Noguchi, H.; Gompper, G. Relevance of angular momentum conservation in mesoscale hydrodynamics simulations. Phys. Rev. E 2007, 76, 046705. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Allahyarov, A.; Gompper, G. Mesoscopic solvent simulations: Multiparticle-collision dynamics of three-dimensional flows. Phys. Rev. E 2002, 66, 036702. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Noguchi, H.; Gompper, G. Transport coefficients of off-lattice mesoscale-hydrodynamics simulation techniques. Phys. Rev. E 2008, 78, 016706. [Google Scholar] [CrossRef] [Scilit]
- Lamura, A.; Gompper, G.; Ihle, T.; Kroll, D.M. Multi-particle collision dynamics: Flow around a circular and a square cylinder. Europhys. Lett. 2001, 56, 319. [Google Scholar] [CrossRef] [Scilit]
- Allen, M.P.; Tildesley, D.J. Computer Simulation of Liquids; Clarendon Press: Oxford, UK, 1987. [Google Scholar]
- Finken, R.; Lamura, A.; Seifert, U.; Gompper, G. Two-dimensional fluctuating vesicles in linear shear flow. Eur. Phys. J. E 2008, 25, 309. [Google Scholar] [CrossRef] [Scilit]
- Lamura, A.; Gompper, G. Rheological properties of sheared vesicle and cell suspensions. Procedia IUTAM 2015, 16, 3. [Google Scholar] [CrossRef] [Scilit]
- Lamura, A.; Gompper, G. Numerical study of the flow around a cylinder using multi-particle collision dynamics. Eur. Phys. J. E 2002, 9, 477. [Google Scholar] [CrossRef] [Scilit]
- Mewis, J.; Wagner, N.J. Colloidal Suspension Rheology; Cambridge University Press: Cambridge, UK, 2012. [Google Scholar]
- Tao, Y.-G.; Götze, I.O.; Gompper, G. Multiparticle collision dynamics modeling of viscoelastic fluids. J. Chem. Phys. 2008, 128, 144902. [Google Scholar] [CrossRef] [Scilit]
- Thiébaud, M.; Shen, Z.; Harting, J.; Misbah, C. Prediction of anomalous blood viscosity in confined shear flow. Phys. Rev. Lett. 2014, 112, 238304. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Shen, Z.; Farutin, A.; Thiébaud, M.; Misbah, C. Interaction and rheology of vesicle suspensions in confined shear flow. Phys. Rev. Fluids 2017, 2, 103101. [Google Scholar] [CrossRef] [Scilit]
- Nait-Ouhra, A.; Guckenberger, A.; Farutin, A.; Ez-Zahraouy, H.; Benyoussef, A.; Gekle, S.; Misbah, C. Lateral vesicle migration in a bounded shear flow: Viscosity contrast leads to off-centered solutions. Phys. Rev. Fluids 2018, 3, 123601. [Google Scholar] [CrossRef] [Scilit]
- Brenner, H. The slow motion of a sphere through a viscous fluid towards a plane surface. Chem. Eng. Sci. 1961, 16, 242. [Google Scholar] [CrossRef] [Scilit]
- Abreu, D.; Seifert, U. Effect of thermal noise on vesicles and capsules in shear flow. Phys. Rev. E 2012, 86, 010902. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Abreu, D.; Seifert, U. Noisy nonlinear dynamics of vesicles in flow. Phys. Rev. Lett. 2013, 110, 238103. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Levant, M.; Steinberg, V. Amplification of thermal noise by vesicle dynamics. Phys. Rev. Lett. 2012, 109, 268103. [Google Scholar] [CrossRef] [Scilit]
- Ihle, T.; Kroll, D.M. Stochastic rotation dynamics: A Galilean-invariant mesoscopic model for fluid flow. Phys. Rev. E 2001, 63, 020201(R). [Google Scholar] [CrossRef] [Scilit]











Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations. |
© 2022 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Lamura, A. Numerical Study of a Confined Vesicle in Shear Flow at Finite Temperature. Mathematics 2022, 10, 3570. https://doi.org/10.3390/math10193570
Lamura A. Numerical Study of a Confined Vesicle in Shear Flow at Finite Temperature. Mathematics. 2022; 10(19):3570. https://doi.org/10.3390/math10193570
Chicago/Turabian StyleLamura, Antonio. 2022. "Numerical Study of a Confined Vesicle in Shear Flow at Finite Temperature" Mathematics 10, no. 19: 3570. https://doi.org/10.3390/math10193570
APA StyleLamura, A. (2022). Numerical Study of a Confined Vesicle in Shear Flow at Finite Temperature. Mathematics, 10(19), 3570. https://doi.org/10.3390/math10193570

