Exploring the Genetic Architecture of Myocarditis and Inherited Cardiomyopathies
Abstract
1. Introduction
2. Methods
3. Results
3.1. Diagnosis of Myocarditis
3.2. Guideline Recommendations for Genetic Testing
3.3. Epidemiology of Myocarditis
3.4. Pathogenesis
3.5. Conceptual Framework: The Genetically Vulnerable Myocardium and Second-Hit Model
3.6. Clinical Significance and Prognostic Implications of Myocarditis
3.7. Treatment of Myocarditis
4. The Genetic Architecture
4.1. Desmosomal Genes and ACM
4.2. Sarcomeres, Titin, and DCM
4.3. Nuclear Envelope Genes and Stress Pathways
4.4. Ion Channelopathies and Electrical Instability
5. Discussion
6. Limitations
7. Future Directions
8. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| ACM | Arrhythmogenic Cardiomyopathy |
| ARVC | Arrhythmogenic Right Ventricular Cardiomyopathy |
| BAG3 | BCL2-Associated Athanogene 3 |
| BNP | B-type Natriuretic Peptide |
| CMR | Cardiovascular Magnetic Resonance |
| DCM | Dilated Cardiomyopathy |
| DES | Desmin |
| DSC2 | Desmocollin-2 |
| DSG2 | Desmoglein-2 |
| DSP | Desmoplakin |
| ECG | Electrocardiogram |
| EMB | Endomyocardial Biopsy |
| EMD | Emerin |
| FDG | Fluorodeoxyglucose |
| FLNC | Filamin C |
| GCM | Giant Cell Myocarditis |
| GWAS | Genome-Wide Association Study |
| HCM | Hypertrophic Cardiomyopathy |
| HLA | Human Leukocyte Antigen |
| ICD | Implantable Cardioverter-Defibrillator |
| IFN-γ | Interferon-gamma |
| IL-1β | Interleukin-1 beta |
| IL-17 | Interleukin-17 |
| JUP | Junction Plakoglobin |
| LGE | Late Gadolinium Enhancement |
| LMNA | Lamin A/C |
| LVEF | Left Ventricular Ejection Fraction |
| MYBPC3 | Myosin-Binding Protein C, Cardiac-Type |
| MYH7 | Beta-Myosin Heavy Chain |
| NF-κB | Nuclear Factor Kappa-Light-Chain-Enhancer of Activated B Cells |
| NK Cells | Natural Killer Cells |
| NLRP3 | NOD-, LRR- and Pyrin Domain-Containing Protein 3 |
| NGS | Next-Generation Sequencing |
| NSVT | Non-Sustained Ventricular Tachycardia |
| PET | Positron Emission Tomography |
| PKP2 | Plakophilin-2 |
| PLN | Phospholamban |
| P/LP | Pathogenic or Likely Pathogenic (variant) |
| RYR2 | Ryanodine Receptor 2 |
| SARS-CoV-2 | Severe Acute Respiratory Syndrome Coronavirus 2 |
| SCD | Sudden Cardiac Death |
| SCN5A | Sodium Voltage-Gated Channel Alpha Subunit 5 |
| SPECT | Single-Photon Emission Computed Tomography |
| STAT3 | Signal Transducer and Activator of Transcription 3 |
| SYNE1/SYNE2 | Synaptic Nuclear Envelope Protein 1/2 |
| Th17 | T-Helper 17 Cells |
| TLR | Toll-Like Receptor |
| TLR3 | Toll-Like Receptor 3 |
| TNF-α | Tumour Necrosis Factor Alpha |
| Tn | Troponin |
| TTN | Titin |
| TTN-tv | Titin Truncating Variant |
| VCL | Vinculin |
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| Modality | Key Information | Strengths | Limitations | Genetic Clues/Implications |
|---|---|---|---|---|
| ECG | Atrial arrhythmias, conduction disturbances, ST-T wave changes | Rapid | Low specificity | Ventricular arrhythmias may suggest LMNA, DSG2, DSP, or SCN5A variants |
| High-sensitivity Troponin | Indicates myocardial injury | Very sensitive | Non-specific | Present in DSP/ACM |
| TTE | LV/RV function, wall motion | Accessible, repeatable | Poor tissue characterization | Dilatation/dysfunction and monitoring of systolic function relevant to variants in TTN, FLNC, or BAG3 |
| CMR | T1/T2 mapping for edema/interstitial fibrosis/inflammation; LGE for replacement fibrosis | Reference standard | Limited availability & depends on expertise | Ring-like or inferolateral epicardial LGE is typical for DSP cardiomyopathy |
| 18F-FDG PET | Detects active inflammation; useful in atypical cases | Complements CMR | Physiologic uptake confounds | Persistent focal FDG uptake may occur in FLNC, DSP, or LMNA inflammatory phenotypes |
| EMB | Histological subtype and viral PCR | Gold standard | Invasive, sampling error | Inflammation on EMB may reflect inflammatory cardiomyopathy in DSP, FLNC, and LMNA |
| Genetic Testing | Identifies P/LP variants | Enables diagnosis & risk stratification | VUS interpretation. Reported diagnostic yields vary by cohort and case definition | Allows identification of known/unknown pathogenic variants |
| Chromosome | Genetic Variant/Locus | Features | Variant Class | ClinVar/Clinical Interpretation |
|---|---|---|---|---|
| 1 | LMNA [42,43,44] RYR2 [45,46] TNNT2 [47,48] | Myocarditis may unmask inherited cardiomyopathy or channelopathy; inflammatory stress has been associated with malignant ventricular arrhythmias; in children, myocarditis-labelled presentations may reflect genetically mediated DCM/HCM triggered by infection rather than primary inflammatory disease | LMNA: truncating/splice-site; RYR2: missense (channel); TNNT2: missense (sarcomeric) | Variant- and phenotype-dependent. Many LMNA truncating/splice-site variants are Pathogenic/Likely Pathogenic (P/LP); RYR2 and TNNT2 include P/LP variants and VUS depending on the specific variant and clinical context |
| 2 | DES A213V [49] DES p.Glu439Lys [50] TTN truncating variants [43,51,52,53] IFIH1 rs1990760/rs3747517 [54] | Inflammatory stress may accelerate progression to DCM with fibrosis and arrhythmias; fulminant myocarditis-like HF may mask inherited DCM; innate immune sensing variants may modify post-viral disease trajectory (association-level evidence) | DES: missense; TTN: truncating (loss-of-function); IFIH1: common immune-modifier SNPs | DES p.Ala213Val reported as Benign; DES p.Glu439Lys reported as VUS in ClinVar; TTN truncating interpretation is context-dependent (region, transcript, phenotype); IFIH1 SNPs are association loci and not ACMG-classified |
| 3 | SCN5A [44,52,55] | Channelopathy substrate interacting with inflammatory triggers; myocarditis has been associated with increased malignant ventricular arrhythmia risk in genetically susceptible individuals, with phenotypic overlap with inherited arrhythmogenic cardiomyopathy | SCN5A: missense (most common), less often truncating | Variant-dependent. Includes Pathogenic/Likely Pathogenic variants and VUS in ClinVar; interpretation requires disease-specific context |
| 5 | SDHA [47] | Metabolic–genetic vulnerability in pediatric myocarditis-labelled DCM; severe LV dysfunction may not be fully explained by inflammation alone | SDHA: missense or truncating (mitochondrial) | Variant-dependent. Pathogenic/Likely Pathogenic variants reported in mitochondrial disease contexts; interpretation requires phenotype correlation |
| 6 | DSP truncating variants [56,57,58,59] PKP2 [45,60,61] DSG2 [34,62] HLA-A*01:01–B*08:01–C*07:01 [63] HLA/MHC loci [64] | Myocarditis-like inflammatory “hot phases” may represent an early manifestation of inherited ACM; recurrent myocarditis-like episodes may precede overt cardiomyopathy; high arrhythmic burden may occur even with preserved early LVEF; HLA associations are subtype-specific | DSP: truncating; PKP2/DSG2: truncating or missense; HLA: haplotypes/association loci | DSP and PKP2 truncating variants are frequently P/LP in ACM contexts (variant-dependent); DSG2 interpretation is variant-dependent; HLA haplotypes are not ACMG-classified and should be interpreted only in defined myocarditis subtypes |
| 7 | FLNC [31,52,65,66] KCNH2/hERG [67] | Inflammation may modify an underlying arrhythmogenic or dilated cardiomyopathy substrate; viral myocarditis may exacerbate ion-channel dysfunction, increasing malignant arrhythmic risk | FLNC: truncating/splice-site; KCNH2: missense or truncating | FLNC truncating variants are frequently P/LP; KCNH2 interpretation is variant-dependent (P/LP and VUS both reported) |
| 8 | CTSB [68] | Inflammasome activation and pyroptosis contribute to viral myocarditis severity in experimental models; genetic deletion has been associated with improved survival and LV function in animal models | Functional/experimental | Not applicable. Mechanistic evidence; not a Mendelian clinical variant claim |
| 9 | TNC Tenascin-C [69,70,71] | ECM–immune coupling promotes myocardial inflammation and fibrosis and may facilitate transition from acute myocarditis to inflammatory cardiomyopathy | Functional/biomarker (ECM signalling) | Not applicable |
| 10 | BAG3 truncating variants [48,51,72,73] RBM20 [44,65] | Fulminant myocarditis-like acute HF may mask inherited DCM; inflammatory stress may precipitate cardiogenic shock with incomplete LV recovery and progression to chronic DCM | BAG3: truncating; RBM20: missense (splicing regulator) | BAG3 truncating variants are frequently P/LP; RBM20 interpretation is variant-dependent |
| 11 | MYBPC3 truncating variants [50,74] UNC93B1 [75] IRF7 [76] KCNQ1 [67] | Sarcomeric cardiomyopathy may display malignant phenotypes during infection; defects in antiviral innate immunity may worsen viral myocarditis; channelopathy–infection interactions may contribute to arrhythmias | MYBPC3: truncating; UNC93B1/IRF7: rare loss-of-function; KCNQ1: missense or truncating | MYBPC3 truncating variants are frequently P/LP; KCNQ1 interpretation is variant-dependent; immune-pathway genes are phenotype-specific and variant-dependent |
| 12 | PKP2 [45,60,61] CACNA1C [67] TBK1 [77] GABARAPL1 [77] | Myocarditis may trigger biventricular ACM; autophagy and innate immune pathways may modulate viral myocarditis severity; channelopathy–inflammation interaction may increase arrhythmic risk | PKP2: truncating/missense; CACNA1C: missense; TBK1: truncating; GABARAPL1: autophagy pathway | PKP2 variants are frequently P/LP (variant-dependent); CACNA1C and TBK1 are variant-dependent; GABARAPL1 is mechanistic and not ACMG-classified |
| 14 | MYH7 [42,47,48,78] | Pediatric and familial cardiomyopathy may present as myocarditis; myocarditis may act as a trigger or unmasker with adverse remodelling and arrhythmic risk | MYH7: missense (rarely truncating) | Variant-dependent. Many MYH7 variants are Pathogenic/Likely Pathogenic, but not all |
| 15 | TPM1 [47,79] | Sarcomeric disease may be misdiagnosed as myocarditis in children; severe LV dysfunction may occur during inflammatory stress | TPM1: missense (sarcomeric) | Variant-dependent (Pathogenic/Likely Pathogenic and VUS reported) |
| 16 | GABARAPL2 [77] | Autophagy–immune signalling may modify viral myocarditis severity | Mechanistic/autophagy pathway | Not applicable |
| 17 | MIR10A rs3809783 [68] ADORA2B [76] Non-MHC immune loci [80] | Altered antiviral immune signalling may increase myocarditis susceptibility; polygenic predisposition may contribute to chronic or autoimmune myocarditis | Common SNPs/association loci | Not ACMG-classified (risk-modifier associations) |
| 18 | DSG2 [62] DTNA [45] | Desmosomal and cytoskeletal substrates may drive myocarditis-like episodes with progression to ACM and high arrhythmic risk | DSG2: truncating/missense; DTNA: missense/truncating | Variant-dependent. DSG2 includes P/LP variants; DTNA interpretation requires phenotype context |
| 19 | GNA15 [81,82] TNNI3 [47,48] | Polygenic susceptibility may contribute to specific drug-induced myocarditis phenotypes (association-level evidence); sarcomeric variants may influence prognosis in myocarditis-labelled DCM | GNA15: association locus; TNNI3: missense | GNA15 is not ACMG-classified; TNNI3 interpretation is variant-dependent |
| 21 | CXADR [83] | Host–virus interaction may influence susceptibility and severity of myocarditis and DCM through viral entry pathways; strength of evidence varies across experimental and association studies | Host susceptibility locus | Not ACMG-classified unless a specific rare clinical variant is defined |
| X | DMD splice-site variants [84] Dystrophin/DGC remodeling [85] | X-linked DCM may present as myocarditis-like illness; viral infection may increase myocardial injury susceptibility even in the absence of skeletal myopathy | DMD: splice-site or truncating (loss-of-function) | DMD LoF/splice variants are frequently P/LP; cardiomyopathy interpretation remains phenotype-dependent |
| Viral genome | Coxsackievirus B3 lineages [86] | Viral genetic diversity may influence myocarditis phenotype and severity via host–virus genomic interaction | Viral lineage | Not applicable |
| Multiple | ACE2/TMPRSS2/IL6/FURIN/AGT/PAI-1 [87] Broad cardiomyopathy panels [43,88,89] Familial screening/autopsy yield [52,66,90,91] | Pathogenic variants are identified in a subset of acute myocarditis cases in some cohorts; genotype-positive myocarditis has been associated with recurrence, fibrosis, and arrhythmias; supports targeted genetic testing and family screening when red flags are present | Mixed: association loci and Mendelian cardiomyopathy genes | Association loci are not ACMG-classified; Mendelian genes are interpreted variant-by-variant using ACMG criteria and phenotype context |
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Pradeep Kundur, S.; Malik, A.; Mizori, R.; Sivalokanathan, S. Exploring the Genetic Architecture of Myocarditis and Inherited Cardiomyopathies. Cardiogenetics 2026, 16, 4. https://doi.org/10.3390/cardiogenetics16010004
Pradeep Kundur S, Malik A, Mizori R, Sivalokanathan S. Exploring the Genetic Architecture of Myocarditis and Inherited Cardiomyopathies. Cardiogenetics. 2026; 16(1):4. https://doi.org/10.3390/cardiogenetics16010004
Chicago/Turabian StylePradeep Kundur, Sukruth, Ali Malik, Rasi Mizori, and Sanjay Sivalokanathan. 2026. "Exploring the Genetic Architecture of Myocarditis and Inherited Cardiomyopathies" Cardiogenetics 16, no. 1: 4. https://doi.org/10.3390/cardiogenetics16010004
APA StylePradeep Kundur, S., Malik, A., Mizori, R., & Sivalokanathan, S. (2026). Exploring the Genetic Architecture of Myocarditis and Inherited Cardiomyopathies. Cardiogenetics, 16(1), 4. https://doi.org/10.3390/cardiogenetics16010004

