Gene Polymorphisms LEP, LEPR, 5HT2A, GHRL, NPY, and FTO-Obesity Biomarkers in Metabolic Risk Assessment: A Retrospective Pilot Study in Overweight and Obese Population in Romania
Abstract
:1. Introduction
2. Materials and Methods
2.1. DNA Extraction and Genotyping
2.2. Statistical Analysis
3. Results
3.1. Socio-Demographic Data
3.2. LEP Gene
3.3. Leptin Receptor Gene
3.4. 5HTR2A Gene
3.5. GHRL Gene
3.6. NPY Gene
3.7. FTO Gene
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Gene | Chromosome | SNP | rsID | Amino Acid | Biochemical Structure |
---|---|---|---|---|---|
LEP | 7 | A-2548G | rs7799039 | - | Leptin |
LEPR | 4 | A-223G | rs1137101 | Q223R | Leptin receptor |
5HTR2A | 13 | G-1439A | rs6311 | - | Serotonin 2A receptor |
GHRL | 3 | G-72T | rs696217 | L72M | Ghrelin |
NPY | 4 | T-29063C | rs16139 | L7P | Neuropeptide Y |
FTO | 16 | A-T | rs9939609 | - | Fat mass and obesity protein |
Total (N) | 55 | ||
---|---|---|---|
Age (X ± SD, y/o.) | 37.4 ± 12 | ||
Gender (n) | M = 25, F = 30 | ||
Weight (X ± SD, kg) | 87 ± 27 kg | ||
Height (X ± SD, cm) | 172 ± 11.4 cm | ||
BMI (X ± SD, kg/m2) | 29.4 ± 8 kg/m2 | ||
BMI (kg/m2) | 18.6–24.9 | 25–29.9 | >30 |
BMI subgroups (N/%) | 13 (23.6%) | 23 (41.8%) | 19 (34.6%) |
Gene | SNP | Genotype Frequencies | * Susceptibility | ||||
---|---|---|---|---|---|---|---|
wtwt | wtvt | vtvt | increased | intermediate | decreased | ||
LEP (n/%) | rs7799039 | 8 (14.5%) | 29 (52.7%) | 17 (30.9%) | 32 (58.2%) | 9 (16.4%) | 13 (23.6%) |
LEPR (n/%) | rs1137101 | 17 (30.9) | 29 (52.7%) | 9 (16.4%) | 38 (69.1%) | 17 (30.9%) | 0 |
5HTR2A (n/%) | rs6311 | 23 (41.8%) | 20 (36.4%) | 12 (21.8%) | 32 (58.2%) | 23 (41.8%) | 0 |
GHRL (n/%) | rs696217 | 45 (81.8%) | 9 (16.4%) | 1 (1.8%) | 0 | 45 (81.8%) | 10 (18.2%) |
NPY (n/%) | rs16139 | 53 (96.4%) | 2 (3.6%) | 0 | 2 (3.6%) | 53 (96.4%) | 0 |
FTO (n/%) | rs9939609 | 15 (27.3%) | 25 (45.5%) | 15 (27.3%) | 40 (72.7%) | 15 (27.3%) | 0 |
Gene | Allele Frequencies | |
---|---|---|
LEP | A = 46 (43%) | G = 62 (57%) |
LEPR | Q = 63 (57%) | R = 47 (43%) |
5HTR2A | G = 66 (60%) | A = 44 (40%) |
GHRL | L = 100 (91%) | M = 10 (9%) |
NPY | L = 108 (98%) | P = 2 (2%) |
FTO | T = 55 (50%) | A = 55 (50%) |
0 | SNP | Genotype 1 | Genotype 2 | Genotype 3 | p-Value |
---|---|---|---|---|---|
LEP | rs7799039 | AA = 9 (16.4%) | GA = 28 (52%) | GG = 17 (30.9%) | p < 0.001 |
LEPR | rs1137101 | QQ = 17 (30.9%) | QR = 29 (52.7%) | RR = 9 (16.4%) | p < 0.001 |
5HTR2A | rs6311 | AA = 12 (21.8%) | GA = 20 (36.4%) | GG = 23 (41.8%) | p < 0.001 |
GHRL | rs696217 | LL = 45 (81.8%) | LM = 9 (16.4%) | MM = 1 (1.8%) | p < 0.001 |
NPY | rs16139 | LL = 53 (96.4%) | LP = 2 (3.6%) | PP = 0 (0%) | p < 0.001 |
FTO | rs 9939609 | AA = 15 (27.3%) | TA = 25 (45.5%) | TT = 15 (27.3%) | p < 0.001 |
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Penes, O.N.; Weber, B.; Pop, A.L.; Bodnarescu-Cobanoglu, M.; Varlas, V.N.; Kucukberksun, A.S.; Cretoiu, D.; Varlas, R.G.; Zetu, C. Gene Polymorphisms LEP, LEPR, 5HT2A, GHRL, NPY, and FTO-Obesity Biomarkers in Metabolic Risk Assessment: A Retrospective Pilot Study in Overweight and Obese Population in Romania. Cardiogenetics 2024, 14, 93-105. https://doi.org/10.3390/cardiogenetics14020008
Penes ON, Weber B, Pop AL, Bodnarescu-Cobanoglu M, Varlas VN, Kucukberksun AS, Cretoiu D, Varlas RG, Zetu C. Gene Polymorphisms LEP, LEPR, 5HT2A, GHRL, NPY, and FTO-Obesity Biomarkers in Metabolic Risk Assessment: A Retrospective Pilot Study in Overweight and Obese Population in Romania. Cardiogenetics. 2024; 14(2):93-105. https://doi.org/10.3390/cardiogenetics14020008
Chicago/Turabian StylePenes, Ovidiu Nicolae, Bernard Weber, Anca Lucia Pop, Mihaela Bodnarescu-Cobanoglu, Valentin Nicolae Varlas, Aleksandru Serkan Kucukberksun, Dragos Cretoiu, Roxana Georgiana Varlas, and Cornelia Zetu. 2024. "Gene Polymorphisms LEP, LEPR, 5HT2A, GHRL, NPY, and FTO-Obesity Biomarkers in Metabolic Risk Assessment: A Retrospective Pilot Study in Overweight and Obese Population in Romania" Cardiogenetics 14, no. 2: 93-105. https://doi.org/10.3390/cardiogenetics14020008
APA StylePenes, O. N., Weber, B., Pop, A. L., Bodnarescu-Cobanoglu, M., Varlas, V. N., Kucukberksun, A. S., Cretoiu, D., Varlas, R. G., & Zetu, C. (2024). Gene Polymorphisms LEP, LEPR, 5HT2A, GHRL, NPY, and FTO-Obesity Biomarkers in Metabolic Risk Assessment: A Retrospective Pilot Study in Overweight and Obese Population in Romania. Cardiogenetics, 14(2), 93-105. https://doi.org/10.3390/cardiogenetics14020008