Prediction of Oscillations in Glycolysis in Ethanol-Consuming Erythrocyte-Bioreactors
Abstract
:1. Introduction
2. Results and Discussion
2.1. Kinetics of Ethanol Consumption
2.2. Effects of ADH and ALDH Activity
2.3. Effects of Ethanol Concentration
2.4. Mechanism of Oscillations
2.5. Accumulation of Glycolysis Intermediates
2.6. Conclusions
3. Mathematical Model
- The rate of the hexokinase reaction does not depend on glucose concentration because the normal physiological glucose concentration in the blood is significantly larger than the value of the hexokinase Michaelis constant for glucose [35].
- The concentration of orthophosphate is constant and equal to 1.0 mM [22].
- The extracellular concentrations of pyruvate ([PYR]ext) and lactate ([LAC]ext) are constant and equal to 0.07 and 1.2 mM, respectively [22].
- The extracellular concentration of acetate is zero.
- Acetaldehyde produced in the EBRs from ethanol does not leave the cells.
- The possible effect of the transmembrane potential on the transport of metabolites was not taken into account.
- The erythrocyte cell volume is constant.
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Metabolite (a) | Concentration, mM | Metabolite (a) | Concentration, mM |
---|---|---|---|
G6P | 0.073 | PEP | 0.01 |
F6P | 0.024 | PYR | 0.07 |
FDP | 0.0084 | LAC | 1.43 |
DAP | 0.034 | NAD | 0.048 |
GAP | 0.015 | NADH | 0.002 |
1,3-DPG | 5.7 × 10−4 | ATP | 1.471 |
2,3-DPG | 3.5 | ADP | 0.235 |
3-PG | 0.034 | AMP | 0.038 |
2-PG | 0.008 | ACALD | 0 |
№ | Variable (a) | Equation (b) |
---|---|---|
1 | [G6P] | |
2 | [F6P] | |
3 | [FDP] | |
4 | [DAP] | |
5 | [GAP] | |
6 | [1,3-DPG] | |
7 | [2,3-DPG] | |
8 | [3-PG] | |
9 | [2-PG] | |
10 | [PEP] | |
11 | [PYR] | |
12 | [LAC] | |
13 | [NAD] | |
14 | Energy charge (Φ) (c) | |
15 | [ETH] | |
16 | [ACALD] | |
17 | Adenylate pool | [ATP]+[ADP]+[AMP] = P |
18 | Adenylate kinase equilibrium | |
19 | NAD/NADH pool | [NAD] + [NADH] = N |
Hexokinase [22] mM/h, mM, mM |
Glucose-6-phosphate isomerase [22] mM/h, mM, mM, mM |
Phosphofructokinase [22] mM/h, mM, mM, mM, mM, mM |
Aldolase [22] mM/h, mM, mM2, mM, mM, mM, mM, mM |
Triosephosphate isomerase [22,34] mM/h, mM, mM, mM |
Glyceraldehyde phosphate dehydrogenase [22] mM/h, mM, mM, mM, mM, mM, mM |
Phosphoglycerate kinase [22,34] mM/h, mM, mM, mM, mM, mM, mM, mM |
Diphosphoglycerate mutase [22] mM/h, mM, mM |
Diphosphoglycerate phosphatase [22] mM/h, mM, mM |
Phosphoglycerate mutase [22] mM/h, mM, mM |
Enolase [22,34] mM/h, mM, , mM |
Pyruvate kinase [22] mM/h, mM, mM, mM |
Lactate dehydrogenase [22] mM/h, mM, mM, , mM, mM, mM, mM |
Na+/K+-ATPase [22] mM/h, [30] |
All other ATPases are presented by the following equation [22] mM/h, mM |
Alcohol dehydrogenase [32,33] ADH activity—this is a varied parameter in the model. |
Acetaldehyde dehydrogenase [21] —ALDH activity—this is a varied parameter in the model |
Pyruvate transport [31] ; ; |
Lactate transport [31] ; ; |
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Protasov, E.; Martinov, M.; Sinauridze, E.; Vitvitsky, V.; Ataullakhanov, F. Prediction of Oscillations in Glycolysis in Ethanol-Consuming Erythrocyte-Bioreactors. Int. J. Mol. Sci. 2023, 24, 10124. https://doi.org/10.3390/ijms241210124
Protasov E, Martinov M, Sinauridze E, Vitvitsky V, Ataullakhanov F. Prediction of Oscillations in Glycolysis in Ethanol-Consuming Erythrocyte-Bioreactors. International Journal of Molecular Sciences. 2023; 24(12):10124. https://doi.org/10.3390/ijms241210124
Chicago/Turabian StyleProtasov, Evgeniy, Michael Martinov, Elena Sinauridze, Victor Vitvitsky, and Fazoil Ataullakhanov. 2023. "Prediction of Oscillations in Glycolysis in Ethanol-Consuming Erythrocyte-Bioreactors" International Journal of Molecular Sciences 24, no. 12: 10124. https://doi.org/10.3390/ijms241210124