Search Results (912)

Over the decades, cattle have not been considered primary hosts for influenza A viruses (IAV), and their role in influenza epidemiology has been largely unrecognized. While bovines are known reservoirs for influenza D virus, the recent emergence of highly pathogenic avian influenza (HPAI) H5N1 clade 2.3.4.4b in U.S. dairy cattle marks an alarming shift in influenza ecology. Since March 2024, this virus has affected thousands of dairy cows, causing clinical signs such as fever, reduced feed intake, drastic declines in milk production, and abnormal milk appearance. Evidence suggests that the virus may be replicated within mammary tissue, raising urgent concerns about milk safety, foodborne transmission, and occupational exposure. This review highlights the unprecedented expansion of viruses into bovine populations, exploring the potential for host adaptation, and interconnected roles of pets, peridomestic animals, and human exposure within shared environments. The potential impacts on dairy production, food safety, and zoonotic spillover highlight the urgent need for integrated One Health surveillance to stay ahead of this evolving threat. Full article

Y. enterocolitica is a cold-tolerant, foodborne pathogen that poses a significant risk to public health, with pigs identified as its main reservoir. This review explores the current knowledge on the epidemiology, transmission, and virulence of Y. enterocolitica in pigs, highlighting their central role in spreading the bacterium to humans—primarily through the consumption of raw or undercooked pork. The pathogen is frequently found in pig tonsils and intestines and can contaminate meat during slaughter. Among the various strains, bioserotype 4/O:3 is the most common cause of human illness. Y. enterocolitica carries a diverse set of virulence genes, such as ail, yst, inv, and yad, and evades immune responses. The review also covers major outbreaks, risk factors on farms and in slaughterhouses, and the limitations of current surveillance systems. Reducing the impact of Y. enterocolitica requires a One Health approach linking animal health, food safety, and public health. Full article

Background: Hansen’s disease or leprosy is one of the 21 neglected tropical diseases (NTDs). In Ecuador, leprosy is considered eliminated as a public health problem; however, new cases are reported annually. Additionally, Mycobacterium leprae infection was detected in nine-banded armadillos across the country, suggesting a potential zoonotic reservoir. This literature review aims to provide an updated overview of the epidemiological situation of leprosy in Ecuador, identify knowledge gaps, and outline research priorities to support the development of a comprehensive national strategy for achieving zero autochthonous cases. Methods: This article analyses the current situation of leprosy in Ecuador based on international and national publications. A retrospective literature search using five international, regional, and national publications on leprosy published between 1954 and 2024 (70 years) with no restriction on language or publication date, was performed. Findings: Our review identified 28 publications with the earliest article dating back to 1954. Of these, 14 were published in international journals, 15 (53.6%) were in Spanish. Four nationwide studies documented leprosy cases across Ecuador’s three continental regions (Coast, Andes, and Amazon) with a predominance in the tropical coast. No cases have been reported from the Galápagos Islands. From 1983, Ecuador started multi-drug therapy. Data from the Ministry of Public Health (MoH) system identified 1539 incident cases, showing a significant decline in new cases from 2000 to 2024, with no cases in children. New cases detection rate by 100,000 inhabitants was 0.51 in 2019 according to the World Health Organization (WHO). No study has genotyped the Mycobacterium spp. in human cases, other animal species, or environment. According to the MoH, multibacillary leprosy accounts for 78.95% of diagnosed cases, with confirmation based on Ziehl–Neelsen staining and histopathology. No survey has assessed disabilities, knowledge, attitudes, and practices (KAP) or stigma related to leprosy. Research is needed on transmission routes, Mycobacterium genotyping, genetic susceptibility, and antibiotic resistance. BCG vaccination coverage fell to 75.3% in 2021. Cases are currently diagnosed and treated on an outpatient basis in large hospitals. Conclusions: This comprehensive review highlights persistent gaps in leprosy research and critical information, despite seven decades of documented cases in Ecuador. The disease is still endemic across the country, particularly at subnational level in the subtropics and tropics of the Pacific coast and the Amazon. There is a need for nationwide epidemiological research on reservoirs and the environment applying the One Health concept. Increased laboratory facilities and readily available official data are required to improve our understanding of leprosy in Ecuador. Strengthening community-level efforts is essential for Ecuador to meet the targets of the “WHO’s Towards Zero Leprosy: Strategy 2021–2030.” Full article

Antibiotic resistance (AR) and contamination are critical public and environmental health issues. In the last years, the environmental component of AR has acquired much interest due to its potential links with the human resistome. In particular, freshwater ecosystems are considered strategic sites for environmental AR surveillance, since they can act as both reservoirs and transmission routes for antibiotic-resistant bacteria and antibiotic resistance genes. Many studies are needed to deepen our understanding of AR evolution and dynamics in freshwater ecosystems and, specifically, on the existence of links between environmental and human AR. This calls for the design of robust and adaptive AR surveillance strategies and, concomitantly, the implementation of routine monitoring programs that effectively capture the environmental dimension of AR in freshwater ecosystems. Here, a roadmap for AR monitoring in freshwater ecosystems, framed around four essential questions (how? what? where? when?), is presented to guide researchers and decision-makers in designing and implementing effective environmental AR routine monitoring programs. It was concluded that, due to the complexity, heterogeneity, and dynamic nature of freshwater ecosystems, it seems foreseeable that environmental AR monitoring programs need to be carefully adjusted to the particular casuistry of each freshwater ecosystem, as well as to the specific interests of the corresponding program and the resources available. Still, much research is needed to properly assess and monitor the risks derived from the emergence and dissemination of AR determinants in freshwaters for both ecosystem and human health. By synthesizing current knowledge and methodologies, this review consolidates existing approaches and can serve as a guide for planning AR monitoring programs in freshwater ecosystems. Full article

The use of untreated livestock manure in urban agriculture sustains soil fertility but risks disseminating antimicrobial resistance (AMR) in resource-limited settings. This study characterized antibiotic-resistant bacteria (ARB) prevalence across manure–soil–vegetable pathways in Blantyre, Malawi. Using a cross-sectional design, we collected 35 samples (poultry/pig manure, farm/home soils, Brassica rapa subsp. chinensis, Brassica rapa, and Amaranthus spp.) from five livestock farms. Microbiological analysis with API 20E identification and disk diffusion testing revealed clear differences in contamination: Escherichia coli dominated pig manure (52%) and farm soil (35%), with detection in vegetables suggesting possible transfer (e.g., 20% in Brassica rapa subsp. chinensis), while Klebsiella pneumoniae contaminated all sample types (peak: 60% vegetables and 67% home soils). All manure isolates exhibited sulfamethoxazole–trimethoprim resistance, with 50% of pig manure E. coli showing cefotaxime resistance. Soil isolates mirrored these patterns (100% ampicillin resistance in K. pneumoniae and 77% cefotaxime resistance in farm soil E. coli). Vegetables displayed severe multidrug resistance (100% E. coli and 80% K. pneumoniae resistant to ≥3 classes), including critical gentamicin resistance (100% E. coli). Composting for ≤6 weeks, as practiced on the studied farms, did not eliminate ARBs, suggesting that longer durations may be needed. Notably, this study provides the first phenotypic evidence of presumptive Pasteurella-like organisms on edible leafy vegetables, specifically 45% in Amaranthus spp. and 6.1% in Brassica rapa, suggesting a potential zoonotic transmission route from livestock farms that requires molecular confirmation. These findings demonstrate manure-amended farms as AMR reservoirs, necessitating extended composting and antibiotic stewardship to mitigate One Health risks. Full article

Influenza viruses are major threats to global health, with potential to cause widespread disease in both humans and animals. Cattle, once considered resistant, are susceptible hosts for multiple influenza viruses, including influenza A, C and D, while no evidence currently supports infection with influenza B virus. Cattle serve not only as natural reservoirs for influenza D virus but also as emerging spillover hosts for highly pathogenic avian influenza A strains like H5N1. Their role in sustaining viral circulation, facilitating interspecies transmission, and potentially contributing to viral evolution raises significant concerns about future global outbreaks. As host immunity controls viral clearance and spread, understanding how cattle respond to influenza is essential. While most research has focused on antibody-mediated immunity, T cells play indispensable roles in controlling influenza infections by regulating antibody response, clearing infected cells, and providing long-term protection. However, bovine T cell responses to influenza remain poorly characterized. Given that most research has focused on mice and humans, this review outlines current knowledge of bovine T cell responses to influenza viruses in comparison to these well-characterized models. Cross-species comparative studies are essential to identify species-specific immunity, guide cattle vaccine development, and build predictive models to evaluate future pandemic potential. Full article

Backyard production systems (BPSs) are common in Chile and play an important role in food access and local trade. However, these systems often lack basic biosecurity and disease prevention practices, which increases the risk of disease spreading. In this study, we evaluated the presence of two major avian respiratory viruses, infectious bronchitis virus (IBV) and infectious laryngotracheitis virus (ILTV), in BPSs located near wetlands in central Chile. These areas are known as the country’s main poultry production zones. We collected 449 poultry serum samples from 88 BPSs and performed serological tests using ELISA. Additionally, we analyzed 250 poultry tracheal swabs from 31 BPSs using qPCR. The results showed high seroprevalence levels: 95.5% of BPSs tested positive for IBV and 85.2% for ILTV. At the animal level, 82.2% were positive for IBV and 57.2% for ILTV. Most birds had antibodies to both viruses. However, active infections were less frequent, with 4.3% of tracheal swabs testing positive for IBV and 14.1% for ILTV during 2021 and 0.6% and 3.8% for IBV and ILTV, respectively, during 2024. This is the first serological and molecular evidence of IBV and ILTV circulation in backyard poultry in central Chile. Since this region includes most of the country’s poultry industry, these findings raise concern about the risk of virus transmission to commercial farms. The high circulation rates suggest that backyard poultry could act as reservoirs and may contribute to decreased productivity. Our results highlight the need for improved disease surveillance and enhancement of biosecurity in BPSs in Chile. Full article

Natural dynamical systems can often display various long-term behaviours, ranging from entirely predictable decaying states to unpredictable, chaotic regimes or, more interestingly, highly correlated and intricate states featuring emergent phenomena. That, of course, imposes a level of generality on the models we use to study them. Among those models, coupled oscillators and cellular automata (CA) present a unique opportunity to advance the understanding of complex temporal behaviours because of their conceptual simplicity but very rich dynamics. In this contribution, we review the work completed by our research team over the last few years in the development and application of an alternative information-based characterization scheme to study the emergent behaviour and information handling of nonlinear systems, specifically Adler-type oscillators under different types of coupling: local phase-dependent (LAP) coupling and Kuramoto-like local (LAK) coupling. We thoroughly studied the long-term dynamics of these systems, identifying several distinct dynamic regimes, ranging from periodic to chaotic and complex. The systems were analysed qualitatively and quantitatively, drawing on entropic measures and information theory. Measures such as entropy density (Shannon entropy rate), effective complexity measure, and Lempel–Ziv complexity/information distance were employed. Our analysis revealed similar patterns and behaviours between these systems and CA, which are computationally capable systems, for some specific rules and regimes. These findings further reinforce the argument around computational capabilities in dynamical systems, as understood by information transmission, storage, and generation measures. Furthermore, the edge of chaos hypothesis (EOC) was verified in coupled oscillators systems for specific regions of parameter space, where a sudden increase in effective complexity measure was observed, indicating enhanced information processing capabilities. Given the potential for exploiting this non-anthropocentric computational power, we propose this alternative information-based characterization scheme as a general framework to identify a dynamical system’s proximity to computationally enhanced states. Furthermore, this study advances the understanding of emergent behaviour in nonlinear systems. It explores the potential for leveraging the features of dynamical systems operating at the edge of chaos by coupling them with computationally capable settings within machine learning frameworks, specifically by using them as reservoirs in Echo State Networks (ESNs) for time series forecasting and predictive modeling. This approach aims to enhance the predictive capacity, particularly that of chaotic systems, by utilising EOC systems’ complex, sensitive dynamics as the ESN reservoir. Full article

Antimicrobial resistance (AMR) presents a growing global threat, driven by widespread antibiotic misuse across human and veterinary medicine. Companion animals, particularly dogs and cats, harbor complex natural microbiota—including skin, mucosal, and gastrointestinal communities—that are essential to their health yet also serve as reservoirs of antibiotic resistance genes (ARGs). These ARGs can spread through horizontal gene transfer (HGT), especially during bacterial imbalances such as endogenous infections or surgical interventions, increasing the risk of difficult-to-treat infections. Documented zoonotic and anthroponotic transmissions of resistant strains such as MRSA, MRSP, and ESBL-producing E. coli highlight the bidirectional nature of ARG flow between animals and humans. This underscores the critical importance of the One Health approach, which promotes interdisciplinary collaboration to monitor, understand, and combat AMR across the human–animal-environment interface. Key mechanisms of ARG dissemination, the role of companion animal microbiota, and real-world examples of resistance transfer between species illustrate the complexity and urgency of addressing AMR. Targeted surveillance, rational antibiotic use, and public awareness are essential to preserving antimicrobial efficacy and safeguarding both human and animal populations. Full article

Yersinia pestis, the causative agent of plague, has triggered multiple pandemics throughout human history, yet its long-term evolutionary patterns and reservoir dynamics remain poorly understood. Here, we present a global phylogenomic analysis of ancient and modern Y. pestis strains spanning from the Neolithic and Bronze Age to the present day. We show that pandemic-causing lineages did not arise from a single ancestral strain but instead emerged independently along deep branches of the Y. pestis phylogeny. Pandemic-associated Y. pestis strains were recovered exclusively from human remains and display clear local temporal divergence, indicating evolution driven by human transmission during outbreaks. These findings support the hypothesis that plague emergence is driven by complex, regionally rooted reservoirs, with recurrent spillovers into human populations across millennia. Our work highlights the need to view plague not as a series of isolated outbreaks but as a long-standing zoonotic threat shaped by deep evolutionary history, host ecology, and human societal structures. Full article

Japanese encephalitis virus (JEV) is a mosquito-borne zoonotic flavivirus that circulates primarily within animal populations and occasionally spills over to humans, causing severe neurological disease. While humans are terminal hosts, veterinary species such as pigs and birds play essential roles in viral amplification and maintenance, making JEV fundamentally a veterinary infectious disease with zoonotic potential. This review summarizes the current understanding of JEV transmission dynamics from a veterinary and ecological perspective, emphasizing the roles of amplifying hosts and animal surveillance in controlling viral circulation. Recent genotype shifts and viral evolution have raised concerns regarding vaccine effectiveness and regional emergence. National surveillance systems and animal-based monitoring strategies are examined for their predictive value in detecting outbreaks early. Veterinary and human vaccination strategies are also reviewed, highlighting the importance of integrated One Health approaches. Advances in modeling and climate-responsive surveillance further underscore the dynamic and evolving landscape of JEV transmission. By managing the infection in animal reservoirs, veterinary interventions form the foundation of sustainable zoonotic disease control. Full article

Rabies remains a significant global public health concern, causing an estimated 59,000–69,000 human fatalities annually. Despite being entirely preventable through vaccination, rabies continues to impose substantial economic burdens worldwide. This study presents a scoping review of the economic research on rabies to determine overlaps and gaps in knowledge and inform future research strategies. We selected 150 studies (1973–2024) to analyze. The review categorizes the literature based on geographic distribution, species focus, and type of study. Findings indicate that economic studies are disproportionately concentrated in developed countries, such as the United States and parts of Europe, where rabies risk is low, while high-risk regions, particularly in Africa and Asia, remain underrepresented. Most studies focus on dog-mediated rabies, reflecting its dominant role in human transmission, while fewer studies assess the economic impacts of wildlife and livestock-mediated rabies. Case studies and modeling approaches dominate the literature, whereas cost–benefit and cost–effectiveness analyses—critical for informing resource allocation—are limited. The review highlights the need for more economic evaluations in rabies-endemic regions, expanded research on non-dog reservoirs, and broader use of economic methods. Addressing these gaps will be crucial for optimizing rabies control and supporting global initiatives to eliminate dog-mediated rabies by 2030. Full article

This review explores the biofilm architecture and drug resistance of Enterococcus faecalis in clinical and environmental settings. The biofilm in E. faecalis is a heterogeneous, three-dimensional, mushroom-like or multilayered structure, characteristically forming diplococci or short chains interspersed with water channels for nutrient exchange and waste removal. Exopolysaccharides, proteins, lipids, and extracellular DNA create a protective matrix. Persister cells within the biofilm contribute to antibiotic resistance and survival. The heterogeneous architecture of the E. faecalis biofilm contains both dense clusters and loosely packed regions that vary in thickness, ranging from 10 to 100 µm, depending on the environmental conditions. The pathogenicity of the E. faecalis biofilm is mediated through complex interactions between genes and virulence factors such as DNA release, cytolysin, pili, secreted antigen A, and microbial surface components that recognize adhesive matrix molecules, often involving a key protein called enterococcal surface protein (Esp). Clinically, it is implicated in a range of nosocomial infections, including urinary tract infections, endocarditis, and surgical wound infections. The biofilm serves as a nidus for bacterial dissemination and as a reservoir for antimicrobial resistance. The effectiveness of first-line antibiotics (ampicillin, vancomycin, and aminoglycosides) is diminished due to reduced penetration, altered metabolism, increased tolerance, and intrinsic and acquired resistance. Alternative strategies for biofilm disruption, such as combination therapy (ampicillin with aminoglycosides), as well as newer approaches, including antimicrobial peptides, quorum-sensing inhibitors, and biofilm-disrupting agents (DNase or dispersin B), are also being explored to improve treatment outcomes. Environmentally, E. faecalis biofilms contribute to contamination in water systems, food production facilities, and healthcare environments. They persist in harsh conditions, facilitating the spread of multidrug-resistant strains and increasing the risk of transmission to humans and animals. Therefore, understanding the biofilm architecture and drug resistance is essential for developing effective strategies to mitigate their clinical and environmental impact. Full article

Via a One Health approach, this study concomitantly assessed the susceptibility of humans and dogs to Trypanosoma cruzi infections on three islands and in two mainland seashore areas of southern Brazil. Human serum samples were tested using an enzyme-linked immunosorbent assay (ELISA) to detect anti-T. cruzi antibodies, while dog serum samples were tested using indirect fluorescent antibodies in an immunofluorescence assay (IFA). Seropositive human and dog individuals were also tested using quantitative polymerase chain reaction (qPCR) in corresponding blood samples. Overall, 2/304 (0.6%) human and 1/292 dog samples tested seropositive for T. cruzi by ELISA and IFA, respectively, and these cases were also molecularly positive for T. cruzi by qPCR. Although a relatively low positivity rate was observed herein, these cases were likely autochthonous, and the individuals may have been infected as a consequence of isolated events of disturbance in the natural peridomicile areas nearby. Such a disturbance could come in the form of a fire or deforestation event, which can cause stress and parasitemia in wild reservoirs and, consequently, lead to positive triatomines. In conclusion, T. cruzi monitoring should always be conducted in suspicious areas to ensure a Chagas disease-free status over time. Further studies should also consider entomological and wildlife surveillance to fully capture the transmission and spread of T. cruzi on islands and in seashore mainland areas of Brazil and other endemic countries. Full article