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Keywords = surgical phase recognition

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15 pages, 14023 KiB  
Article
Using Masked Image Modelling Transformer Architecture for Laparoscopic Surgical Tool Classification and Localization
by Hisham ElMoaqet, Rami Janini, Mutaz Ryalat, Ghaith Al-Refai, Tamer Abdulbaki Alshirbaji, Nour Aldeen Jalal, Thomas Neumuth, Knut Moeller and Nassir Navab
Sensors 2025, 25(10), 3017; https://doi.org/10.3390/s25103017 - 10 May 2025
Viewed by 2622
Abstract
Artificial intelligence (AI) has shown its potential to advance applications in various medical fields. One such area involves developing integrated AI-based systems to assist in laparoscopic surgery. Surgical tool detection and phase recognition are key components to develop such systems, and therefore, they [...] Read more.
Artificial intelligence (AI) has shown its potential to advance applications in various medical fields. One such area involves developing integrated AI-based systems to assist in laparoscopic surgery. Surgical tool detection and phase recognition are key components to develop such systems, and therefore, they have been extensively studied in recent years. Despite significant advancements in this field, previous image-based methods still face many challenges that limit their performance due to complex surgical scenes and limited annotated data. This study proposes a novel deep learning approach for classifying and localizing surgical tools in laparoscopic surgeries. The proposed approach uses a self-supervised learning algorithm for surgical tool classification followed by a weakly supervised algorithm for surgical tool localization, eliminating the need for explicit localization annotation. In particular, we leverage the Bidirectional Encoder Representation from Image Transformers (BEiT) model for tool classification and then utilize the heat maps generated from the multi-headed attention layers in the BEiT model for the localizing of these tools. Furthermore, the model incorporates class weights to address the class imbalance issue resulting from different usage frequencies of surgical tools in surgeries. Evaluated on the Cholec80 benchmark dataset, the proposed approach demonstrated high performance in surgical tool classification, surpassing previous works that utilize both spatial and temporal information. Additionally, the proposed weakly supervised learning approach achieved state-of-the-art results for the localization task. Full article
(This article belongs to the Special Issue Advanced Deep Learning for Biomedical Sensing and Imaging)
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15 pages, 5415 KiB  
Case Report
Rectus Abdominis Muscle Endometriosis: A Unique Case Report with a Literature Review
by Marijana Turčić, Koviljka Matušan Ilijaš, Koraljka Rajković Molek and Petra Valković Zujić
Curr. Issues Mol. Biol. 2025, 47(1), 47; https://doi.org/10.3390/cimb47010047 - 13 Jan 2025
Cited by 1 | Viewed by 1425
Abstract
Introduction and importance: Extrapelvic endometriosis, confined exclusively to the body of the rectus abdominis muscle, is a rare form of abdominal wall endometriosis. While its etiopathology remains unclear, it is often diagnosed in healthy women who present with atypical symptoms and localization unrelated [...] Read more.
Introduction and importance: Extrapelvic endometriosis, confined exclusively to the body of the rectus abdominis muscle, is a rare form of abdominal wall endometriosis. While its etiopathology remains unclear, it is often diagnosed in healthy women who present with atypical symptoms and localization unrelated to any incision site, or in the absence of a history of endometriosis or previous surgery. Presentation of the case: Here, we describe a unique case of intramuscular endometriosis of the rectus abdominis muscle in a healthy 39-year-old Caucasian woman. The condition was located away from any prior incisional scars and presented without typical symptoms or concurrent pelvic disease, making diagnostic imaging unclear. After partial surgical resection of the endometriotic foci, the diagnosis was confirmed histologically. Progestogen-based supportive medication was initiated to prevent the need for additional surgeries and to reduce the risk of recurrence. After 6 years of follow-up and continued progestogen treatment, the patient remains symptom-free and has shown no recurrence of the disease. Clinical discussion: Endometriosis of the rectus abdominis muscle exhibits specific characteristics in terms of localization, etiopathology, symptomatology, and diagnostic imaging, suggesting that it should be considered a distinct clinical entity. Conclusions: Although rare, primary endometriosis of the rectus abdominis muscle should be included in the differential diagnosis for women of childbearing age. Early diagnosis is essential to avoid delayed recognition, tissue damage, and to minimize the risk of recurrence or malignant transformation. Given the increasing frequency of gynecologic and laparoscopic surgeries worldwide, it is crucial to establish standardized reporting protocols, follow-up timelines, and imaging assessments during specific phases of the menstrual cycle. Standardization will help raise awareness of this disease, and further our understanding of its pathogenesis, risk factors, recurrence patterns, and potential for malignant transformation—factors that are still not fully understood. Full article
(This article belongs to the Collection Feature Papers in Molecular Medicine)
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16 pages, 608 KiB  
Review
A Narrative Review of the Best Anesthesia Care for Endovascular Thrombectomy: Early Diagnosis of the Ischemic Stroke and Evaluation of Risk Factors in Female Population
by Filadelfo Coniglione, Francesco Giuseppe Martire, Rudin Domi, Claudia d’Abate, Giulia Donadel, Gentian Huti, Asead Abdyli, Krenar Lilaj and Emilio Piccione
Surgeries 2024, 5(4), 1056-1071; https://doi.org/10.3390/surgeries5040085 - 28 Nov 2024
Cited by 1 | Viewed by 1130
Abstract
Background: The increasing incidence of cerebrovascular accidents represents an emerging problem. The rise in risk factors such as lifestyle choices—smoking, poor nutrition, and metabolic diseases—poses a significant challenge for the global healthcare system. The female population, due to physiological conditions and iatrogenic risks, [...] Read more.
Background: The increasing incidence of cerebrovascular accidents represents an emerging problem. The rise in risk factors such as lifestyle choices—smoking, poor nutrition, and metabolic diseases—poses a significant challenge for the global healthcare system. The female population, due to physiological conditions and iatrogenic risks, may be at a greater risk of developing ischemic accidents. In addition to these acquired conditions, life phases such as pregnancy or puerperium, and medical conditions like surgical treatments and hormone therapy, may elevate this risk. Methods: This narrative aims to assess the various risk factors specific to the female population and evaluate the appropriate management strategies, including anesthetic support. Anesthesia plays a crucial role in enabling pharmacological procedures, such as thrombolysis, or surgical procedures like thrombectomy, in the management of ischemic cerebrovascular events. Results: The review emphasizes the importance of early recognition of risk factors to ensure prompt diagnosis and the most appropriate treatment options for ischemic events. Anesthesia support has become essential for carrying out necessary medical interventions effectively. Choosing the right anesthesia technique for endovascular thrombectomy is particularly significant, requiring consideration of the patient’s characteristics, the timing of diagnosis, and the preferences of the interventional neuroradiologists. Conclusions: It is vital to identify risk factors in the female population early to facilitate timely diagnosis and optimize treatment outcomes. Anesthetic support plays a key role in ensuring that critical procedures, such as thrombolysis and thrombectomy, are carried out effectively. Tailoring anesthesia choices to the patient’s individual needs is critical for a successful intervention. Full article
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9 pages, 527 KiB  
Review
Use of Fluorescence Imaging in Liver Transplant Surgery
by Alvaro Ducas, Alessandro Martinino, Lorna Astrid Evans, Emiliano G. Manueli Laos, Francesco Giovinazzo and on behalf of the SMAGEICS Group
J. Clin. Med. 2024, 13(9), 2610; https://doi.org/10.3390/jcm13092610 - 29 Apr 2024
Cited by 2 | Viewed by 1830
Abstract
Liver transplant surgery is a complex procedure that demands high knowledge of surgical anatomy and the precise recognition and preservation of structures. To address this, the use of fluorescence imaging has facilitated the identification of anatomical structures such as biliary ducts, arteries, and [...] Read more.
Liver transplant surgery is a complex procedure that demands high knowledge of surgical anatomy and the precise recognition and preservation of structures. To address this, the use of fluorescence imaging has facilitated the identification of anatomical structures such as biliary ducts, arteries, and liver segmentation. Indocyanine green is among the most commonly utilized fluorescent agents, not just during surgery but also in the pre- and postoperative phases, where it is used to assess graft failure by measuring the plasma disappearance rate. New advancements such as artificial intelligence paired with fluorescence imaging have the potential to enhance patient outcomes. Additionally, technologies such as augmented reality and mixed reality could be integrated into surgical procedures, broadening the scope of possibilities for improving patient safety. Full article
(This article belongs to the Special Issue Liver Transplantation: Current Management and Future Options)
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17 pages, 5885 KiB  
Article
Artificial Intelligence Image Recognition System for Preventing Wrong-Site Upper Limb Surgery
by Yi-Chao Wu, Chao-Yun Chang, Yu-Tse Huang, Sung-Yuan Chen, Cheng-Hsuan Chen and Hsuan-Kai Kao
Diagnostics 2023, 13(24), 3667; https://doi.org/10.3390/diagnostics13243667 - 14 Dec 2023
Cited by 2 | Viewed by 2371
Abstract
Our image recognition system employs a deep learning model to differentiate between the left and right upper limbs in images, allowing doctors to determine the correct surgical position. From the experimental results, it was found that the precision rate and the recall rate [...] Read more.
Our image recognition system employs a deep learning model to differentiate between the left and right upper limbs in images, allowing doctors to determine the correct surgical position. From the experimental results, it was found that the precision rate and the recall rate of the intelligent image recognition system for preventing wrong-site upper limb surgery proposed in this paper could reach 98% and 93%, respectively. The results proved that our Artificial Intelligence Image Recognition System (AIIRS) could indeed assist orthopedic surgeons in preventing the occurrence of wrong-site left and right upper limb surgery. At the same time, in future, we will apply for an IRB based on our prototype experimental results and we will conduct the second phase of human trials. The results of this research paper are of great benefit and research value to upper limb orthopedic surgery. Full article
(This article belongs to the Special Issue Artificial Intelligence in Orthopedic Surgery and Sport Medicine)
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13 pages, 2233 KiB  
Article
P-CSEM: An Attention Module for Improved Laparoscopic Surgical Tool Detection
by Herag Arabian, Tamer Abdulbaki Alshirbaji, Nour Aldeen Jalal, Sabine Krueger-Ziolek and Knut Moeller
Sensors 2023, 23(16), 7257; https://doi.org/10.3390/s23167257 - 18 Aug 2023
Cited by 5 | Viewed by 1786
Abstract
Minimal invasive surgery, more specifically laparoscopic surgery, is an active topic in the field of research. The collaboration between surgeons and new technologies aims to improve operation procedures as well as to ensure the safety of patients. An integral part of operating rooms [...] Read more.
Minimal invasive surgery, more specifically laparoscopic surgery, is an active topic in the field of research. The collaboration between surgeons and new technologies aims to improve operation procedures as well as to ensure the safety of patients. An integral part of operating rooms modernization is the real-time communication between the surgeon and the data gathered using the numerous devices during surgery. A fundamental tool that can aid surgeons during laparoscopic surgery is the recognition of the different phases during an operation. Current research has shown a correlation between the surgical tools utilized and the present phase of surgery. To this end, a robust surgical tool classifier is desired for optimal performance. In this paper, a deep learning framework embedded with a custom attention module, the P-CSEM, has been proposed to refine the spatial features for surgical tool classification in laparoscopic surgery videos. This approach utilizes convolutional neural networks (CNNs) integrated with P-CSEM attention modules at different levels of the architecture for improved feature refinement. The model was trained and tested on the popular, publicly available Cholec80 database. Results showed that the attention integrated model achieved a mean average precision of 93.14%, and visualizations revealed the ability of the model to adhere more towards features of tool relevance. The proposed approach displays the benefits of integrating attention modules into surgical tool classification models for a more robust and precise detection. Full article
(This article belongs to the Special Issue Optical and Acoustical Methods for Biomedical Imaging and Sensing)
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15 pages, 1971 KiB  
Article
Surgical Phase Recognition in Inguinal Hernia Repair—AI-Based Confirmatory Baseline and Exploration of Competitive Models
by Chengbo Zang, Mehmet Kerem Turkcan, Sanjeev Narasimhan, Yuqing Cao, Kaan Yarali, Zixuan Xiang, Skyler Szot, Feroz Ahmad, Sarah Choksi, Daniel P. Bitner, Filippo Filicori and Zoran Kostic
Bioengineering 2023, 10(6), 654; https://doi.org/10.3390/bioengineering10060654 - 27 May 2023
Cited by 11 | Viewed by 3018
Abstract
Video-recorded robotic-assisted surgeries allow the use of automated computer vision and artificial intelligence/deep learning methods for quality assessment and workflow analysis in surgical phase recognition. We considered a dataset of 209 videos of robotic-assisted laparoscopic inguinal hernia repair (RALIHR) collected from 8 surgeons, [...] Read more.
Video-recorded robotic-assisted surgeries allow the use of automated computer vision and artificial intelligence/deep learning methods for quality assessment and workflow analysis in surgical phase recognition. We considered a dataset of 209 videos of robotic-assisted laparoscopic inguinal hernia repair (RALIHR) collected from 8 surgeons, defined rigorous ground-truth annotation rules, then pre-processed and annotated the videos. We deployed seven deep learning models to establish the baseline accuracy for surgical phase recognition and explored four advanced architectures. For rapid execution of the studies, we initially engaged three dozen MS-level engineering students in a competitive classroom setting, followed by focused research. We unified the data processing pipeline in a confirmatory study, and explored a number of scenarios which differ in how the DL networks were trained and evaluated. For the scenario with 21 validation videos of all surgeons, the Video Swin Transformer model achieved ~0.85 validation accuracy, and the Perceiver IO model achieved ~0.84. Our studies affirm the necessity of close collaborative research between medical experts and engineers for developing automated surgical phase recognition models deployable in clinical settings. Full article
(This article belongs to the Special Issue Artificial Intelligence in Surgery)
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85 pages, 4243 KiB  
Review
The Role of Different Immunocompetent Cell Populations in the Pathogenesis of Head and Neck Cancer—Regulatory Mechanisms of Pro- and Anti-Cancer Activity and Their Impact on Immunotherapy
by Katarzyna Starska-Kowarska
Cancers 2023, 15(6), 1642; https://doi.org/10.3390/cancers15061642 - 7 Mar 2023
Cited by 24 | Viewed by 10115
Abstract
Head and neck squamous cell carcinoma (HNSCC) is one of the most aggressive and heterogeneous groups of human neoplasms. HNSCC is characterized by high morbidity, accounting for 3% of all cancers, and high mortality with ~1.5% of all cancer deaths. It was the [...] Read more.
Head and neck squamous cell carcinoma (HNSCC) is one of the most aggressive and heterogeneous groups of human neoplasms. HNSCC is characterized by high morbidity, accounting for 3% of all cancers, and high mortality with ~1.5% of all cancer deaths. It was the most common cancer worldwide in 2020, according to the latest GLOBOCAN data, representing the seventh most prevalent human malignancy. Despite great advances in surgical techniques and the application of modern combinations and cytotoxic therapies, HNSCC remains a leading cause of death worldwide with a low overall survival rate not exceeding 40–60% of the patient population. The most common causes of death in patients are its frequent nodal metastases and local neoplastic recurrences, as well as the relatively low response to treatment and severe drug resistance. Much evidence suggests that the tumour microenvironment (TME), tumour infiltrating lymphocytes (TILs) and circulating various subpopulations of immunocompetent cells, such regulatory T cells (CD4+CD25+Foxp3+Tregs), cytotoxic CD3+CD8+ T cells (CTLs) and CD3+CD4+ T helper type 1/2/9/17 (Th1/Th2/Th9/Th17) lymphocytes, T follicular helper cells (Tfh) and CD56dim/CD16bright activated natural killer cells (NK), carcinoma-associated fibroblasts (CAFs), myeloid-derived suppressor cells (MDSCs), tumour-associated neutrophils (N1/N2 TANs), as well as tumour-associated macrophages (M1/M2 phenotype TAMs) can affect initiation, progression and spread of HNSCC and determine the response to immunotherapy. Rapid advances in the field of immuno-oncology and the constantly growing knowledge of the immunosuppressive mechanisms and effects of tumour cancer have allowed for the use of effective and personalized immunotherapy as a first-line therapeutic procedure or an essential component of a combination therapy for primary, relapsed and metastatic HNSCC. This review presents the latest reports and molecular studies regarding the anti-tumour role of selected subpopulations of immunocompetent cells in the pathogenesis of HNSCC, including HPV+ve (HPV+) and HPV−ve (HPV) tumours. The article focuses on the crucial regulatory mechanisms of pro- and anti-tumour activity, key genetic or epigenetic changes that favour tumour immune escape, and the strategies that the tumour employs to avoid recognition by immunocompetent cells, as well as resistance mechanisms to T and NK cell-based immunotherapy in HNSCC. The present review also provides an overview of the pre- and clinical early trials (I/II phase) and phase-III clinical trials published in this arena, which highlight the unprecedented effectiveness and limitations of immunotherapy in HNSCC, and the emerging issues facing the field of HNSCC immuno-oncology. Full article
(This article belongs to the Special Issue Molecular Signatures in Head and Neck Cancer)
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19 pages, 12166 KiB  
Article
Laparoscopic Video Analysis Using Temporal, Attention, and Multi-Feature Fusion Based-Approaches
by Nour Aldeen Jalal, Tamer Abdulbaki Alshirbaji, Paul David Docherty, Herag Arabian, Bernhard Laufer, Sabine Krueger-Ziolek, Thomas Neumuth and Knut Moeller
Sensors 2023, 23(4), 1958; https://doi.org/10.3390/s23041958 - 9 Feb 2023
Cited by 9 | Viewed by 3494
Abstract
Adapting intelligent context-aware systems (CAS) to future operating rooms (OR) aims to improve situational awareness and provide surgical decision support systems to medical teams. CAS analyzes data streams from available devices during surgery and communicates real-time knowledge to clinicians. Indeed, recent advances in [...] Read more.
Adapting intelligent context-aware systems (CAS) to future operating rooms (OR) aims to improve situational awareness and provide surgical decision support systems to medical teams. CAS analyzes data streams from available devices during surgery and communicates real-time knowledge to clinicians. Indeed, recent advances in computer vision and machine learning, particularly deep learning, paved the way for extensive research to develop CAS. In this work, a deep learning approach for analyzing laparoscopic videos for surgical phase recognition, tool classification, and weakly-supervised tool localization in laparoscopic videos was proposed. The ResNet-50 convolutional neural network (CNN) architecture was adapted by adding attention modules and fusing features from multiple stages to generate better-focused, generalized, and well-representative features. Then, a multi-map convolutional layer followed by tool-wise and spatial pooling operations was utilized to perform tool localization and generate tool presence confidences. Finally, the long short-term memory (LSTM) network was employed to model temporal information and perform tool classification and phase recognition. The proposed approach was evaluated on the Cholec80 dataset. The experimental results (i.e., 88.5% and 89.0% mean precision and recall for phase recognition, respectively, 95.6% mean average precision for tool presence detection, and a 70.1% F1-score for tool localization) demonstrated the ability of the model to learn discriminative features for all tasks. The performances revealed the importance of integrating attention modules and multi-stage feature fusion for more robust and precise detection of surgical phases and tools. Full article
(This article belongs to the Special Issue Optical and Acoustical Methods for Biomedical Imaging and Sensing)
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16 pages, 5822 KiB  
Article
Multi-Stage Temporal Convolutional Network with Moment Loss and Positional Encoding for Surgical Phase Recognition
by Minyoung Park, Seungtaek Oh, Taikyeong Jeong and Sungwook Yu
Diagnostics 2023, 13(1), 107; https://doi.org/10.3390/diagnostics13010107 - 29 Dec 2022
Cited by 6 | Viewed by 2908
Abstract
In recent times, many studies concerning surgical video analysis are being conducted due to its growing importance in many medical applications. In particular, it is very important to be able to recognize the current surgical phase because the phase information can be utilized [...] Read more.
In recent times, many studies concerning surgical video analysis are being conducted due to its growing importance in many medical applications. In particular, it is very important to be able to recognize the current surgical phase because the phase information can be utilized in various ways both during and after surgery. This paper proposes an efficient phase recognition network, called MomentNet, for cholecystectomy endoscopic videos. Unlike LSTM-based network, MomentNet is based on a multi-stage temporal convolutional network. Besides, to improve the phase prediction accuracy, the proposed method adopts a new loss function to supplement the general cross entropy loss function. The new loss function significantly improves the performance of the phase recognition network by constraining un-desirable phase transition and preventing over-segmentation. In addition, MomnetNet effectively applies positional encoding techniques, which are commonly applied in transformer architectures, to the multi-stage temporal convolution network. By using the positional encoding techniques, MomentNet can provide important temporal context, resulting in higher phase prediction accuracy. Furthermore, the MomentNet applies label smoothing technique to suppress overfitting and replaces the backbone network for feature extraction to further improve the network performance. As a result, the MomentNet achieves 92.31% accuracy in the phase recognition task with the Cholec80 dataset, which is 4.55% higher than that of the baseline architecture. Full article
(This article belongs to the Section Machine Learning and Artificial Intelligence in Diagnostics)
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15 pages, 949 KiB  
Article
Surgical Phase Recognition: From Public Datasets to Real-World Data
by Kadir Kirtac, Nizamettin Aydin, Joël L. Lavanchy, Guido Beldi, Marco Smit, Michael S. Woods and Florian Aspart
Appl. Sci. 2022, 12(17), 8746; https://doi.org/10.3390/app12178746 - 31 Aug 2022
Cited by 13 | Viewed by 5605
Abstract
Automated recognition of surgical phases is a prerequisite for computer-assisted analysis of surgeries. The research on phase recognition has been mostly driven by publicly available datasets of laparoscopic cholecystectomy (Lap Chole) videos. Yet, videos observed in real-world settings might contain challenges, such as [...] Read more.
Automated recognition of surgical phases is a prerequisite for computer-assisted analysis of surgeries. The research on phase recognition has been mostly driven by publicly available datasets of laparoscopic cholecystectomy (Lap Chole) videos. Yet, videos observed in real-world settings might contain challenges, such as additional phases and longer videos, which may be missing in curated public datasets. In this work, we study (i) the possible data distribution discrepancy between videos observed in a given medical center and videos from existing public datasets, and (ii) the potential impact of this distribution difference on model development. To this end, we gathered a large, private dataset of 384 Lap Chole videos. Our dataset contained all videos, including emergency surgeries and teaching cases, recorded in a continuous time frame of five years. We observed strong differences between our dataset and the most commonly used public dataset for surgical phase recognition, Cholec80. For instance, our videos were much longer, included additional phases, and had more complex transitions between phases. We further trained and compared several state-of-the-art phase recognition models on our dataset. The models’ performances greatly varied across surgical phases and videos. In particular, our results highlighted the challenge of recognizing extremely under-represented phases (usually missing in public datasets); the major phases were recognized with at least 76 percent recall. Overall, our results highlighted the need to better understand the distribution of the video data phase recognition models are trained on. Full article
(This article belongs to the Special Issue Novel Advances in Computer-Assisted Surgery)
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19 pages, 3881 KiB  
Review
Imaging Features of Post Main Hepatectomy Complications: The Radiologist Challenging
by Carmen Cutolo, Federica De Muzio, Roberta Fusco, Igino Simonetti, Andrea Belli, Renato Patrone, Francesca Grassi, Federica Dell’Aversana, Vincenzo Pilone, Antonella Petrillo, Francesco Izzo and Vincenza Granata
Diagnostics 2022, 12(6), 1323; https://doi.org/10.3390/diagnostics12061323 - 26 May 2022
Cited by 3 | Viewed by 4208
Abstract
In the recent years, the number of liver resections has seen an impressive growth. Usually, hepatic resections remain the treatment of various liver diseases, such as malignant tumors, benign tumors, hydatid disease, and abscesses. Despite technical advancements and tremendous experience in the field [...] Read more.
In the recent years, the number of liver resections has seen an impressive growth. Usually, hepatic resections remain the treatment of various liver diseases, such as malignant tumors, benign tumors, hydatid disease, and abscesses. Despite technical advancements and tremendous experience in the field of liver resection of specialized centers, there are moderately high rates of postoperative morbidity and mortality, especially in high-risk and older patient populations. Although ultrasonography is usually the first-line imaging examination for postoperative complications, Computed Tomography (CT) is the imaging tool of choice in emergency settings due to its capability to assess the whole body in a few seconds and detect all possible complications. Magnetic resonance cholangiopancreatography (MRCP) is the imaging modality of choice for delineating early postoperative bile duct injuries and ischemic cholangitis that may arise in the late postoperative phase. Moreover, both MDCT and MRCP can precisely detect tumor recurrence. Consequently, radiologists should have knowledge of these surgical procedures for better comprehension of postoperative changes and recognition of the radiological features of various postoperative complications. Full article
(This article belongs to the Special Issue Advancements on Diagnostic and Management of Liver Disease)
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12 pages, 548 KiB  
Article
Radiomics and Machine Learning Analysis Based on Magnetic Resonance Imaging in the Assessment of Colorectal Liver Metastases Growth Pattern
by Vincenza Granata, Roberta Fusco, Federica De Muzio, Carmen Cutolo, Mauro Mattace Raso, Michela Gabelloni, Antonio Avallone, Alessandro Ottaiano, Fabiana Tatangelo, Maria Chiara Brunese, Vittorio Miele, Francesco Izzo and Antonella Petrillo
Diagnostics 2022, 12(5), 1115; https://doi.org/10.3390/diagnostics12051115 - 29 Apr 2022
Cited by 31 | Viewed by 3585
Abstract
To assess Radiomics and Machine Learning Analysis in Liver Colon and Rectal Cancer Metastases (CRLM) Growth Pattern, we evaluated, retrospectively, a training set of 51 patients with 121 liver metastases and an external validation set of 30 patients with a single lesion. All [...] Read more.
To assess Radiomics and Machine Learning Analysis in Liver Colon and Rectal Cancer Metastases (CRLM) Growth Pattern, we evaluated, retrospectively, a training set of 51 patients with 121 liver metastases and an external validation set of 30 patients with a single lesion. All patients were subjected to MRI studies in pre-surgical setting. For each segmented volume of interest (VOI), 851 radiomics features were extracted using PyRadiomics package. Nonparametric test, univariate, linear regression analysis and patter recognition approaches were performed. The best results to discriminate expansive versus infiltrative front of tumor growth with the highest accuracy and AUC at univariate analysis were obtained by the wavelet_LHH_glrlm_ShortRunLowGray Level Emphasis from portal phase of contrast study. With regard to linear regression model, this increased the performance obtained respect to the univariate analysis for each sequence except that for EOB-phase sequence. The best results were obtained by a linear regression model of 15 significant features extracted by the T2-W SPACE sequence. Furthermore, using pattern recognition approaches, the diagnostic performance to discriminate the expansive versus infiltrative front of tumor growth increased again and the best classifier was a weighted KNN trained with the 9 significant metrics extracted from the portal phase of contrast study, with an accuracy of 92% on training set and of 91% on validation set. In the present study, we have demonstrated as Radiomics and Machine Learning Analysis, based on EOB-MRI study, allow to identify several biomarkers that permit to recognise the different Growth Patterns in CRLM. Full article
(This article belongs to the Special Issue Radiomics and Pathomics: Clinical Applications and Next Steps)
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20 pages, 8266 KiB  
Article
Hybrid Spatiotemporal Contrastive Representation Learning for Content-Based Surgical Video Retrieval
by Vidit Kumar, Vikas Tripathi, Bhaskar Pant, Sultan S. Alshamrani, Ankur Dumka, Anita Gehlot, Rajesh Singh, Mamoon Rashid, Abdullah Alshehri and Ahmed Saeed AlGhamdi
Electronics 2022, 11(9), 1353; https://doi.org/10.3390/electronics11091353 - 24 Apr 2022
Cited by 16 | Viewed by 2904
Abstract
In the medical field, due to their economic and clinical benefits, there is a growing interest in minimally invasive surgeries and microscopic surgeries. These types of surgeries are often recorded during operations, and these recordings have become a key resource for education, patient [...] Read more.
In the medical field, due to their economic and clinical benefits, there is a growing interest in minimally invasive surgeries and microscopic surgeries. These types of surgeries are often recorded during operations, and these recordings have become a key resource for education, patient disease analysis, surgical error analysis, and surgical skill assessment. However, manual searching in this collection of long-term surgical videos is an extremely labor-intensive and long-term task, requiring an effective content-based video analysis system. In this regard, previous methods for surgical video retrieval are based on handcrafted features which do not represent the video effectively. On the other hand, deep learning-based solutions were found to be effective in both surgical image and video analysis, where CNN-, LSTM- and CNN-LSTM-based methods were proposed in most surgical video analysis tasks. In this paper, we propose a hybrid spatiotemporal embedding method to enhance spatiotemporal representations using an adaptive fusion layer on top of the LSTM and temporal causal convolutional modules. To learn surgical video representations, we propose exploring the supervised contrastive learning approach to leverage label information in addition to augmented versions. By validating our approach to a video retrieval task on two datasets, Surgical Actions 160 and Cataract-101, we significantly improve on previous results in terms of mean average precision, 30.012 ± 1.778 vs. 22.54 ± 1.557 for Surgical Actions 160 and 81.134 ± 1.28 vs. 33.18 ± 1.311 for Cataract-101. We also validate the proposed method’s suitability for surgical phase recognition task using the benchmark Cholec80 surgical dataset, where our approach outperforms (with 90.2% accuracy) the state of the art. Full article
(This article belongs to the Collection Image and Video Analysis and Understanding)
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16 pages, 1272 KiB  
Article
CT-Based Radiomics Analysis to Predict Histopathological Outcomes Following Liver Resection in Colorectal Liver Metastases
by Vincenza Granata, Roberta Fusco, Sergio Venanzio Setola, Federica De Muzio, Federica Dell’ Aversana, Carmen Cutolo, Lorenzo Faggioni, Vittorio Miele, Francesco Izzo and Antonella Petrillo
Cancers 2022, 14(7), 1648; https://doi.org/10.3390/cancers14071648 - 24 Mar 2022
Cited by 42 | Viewed by 6103
Abstract
Purpose: We aimed to assess the efficacy of radiomic features extracted by computed tomography (CT) in predicting histopathological outcomes following liver resection in colorectal liver metastases patients, evaluating recurrence, mutational status, histopathological characteristics (mucinous), and surgical resection margin. Methods: This retrospectively approved study [...] Read more.
Purpose: We aimed to assess the efficacy of radiomic features extracted by computed tomography (CT) in predicting histopathological outcomes following liver resection in colorectal liver metastases patients, evaluating recurrence, mutational status, histopathological characteristics (mucinous), and surgical resection margin. Methods: This retrospectively approved study included a training set and an external validation set. The internal training set included 49 patients with a median age of 60 years and 119 liver colorectal metastases. The validation cohort consisted of 28 patients with single liver colorectal metastasis and a median age of 61 years. Radiomic features were extracted using PyRadiomics on CT portal phase. Nonparametric Kruskal–Wallis tests, intraclass correlation, receiver operating characteristic (ROC) analyses, linear regression modeling, and pattern recognition methods (support vector machine (SVM), k-nearest neighbors (KNN), artificial neural network (NNET), and decision tree (DT)) were considered. Results: The median value of intraclass correlation coefficients for the features was 0.92 (range 0.87–0.96). The best performance in discriminating expansive versus infiltrative front of tumor growth was wavelet_HHL_glcm_Imc2, with an accuracy of 79%, a sensitivity of 84%, and a specificity of 67%. The best performance in discriminating expansive versus tumor budding was wavelet_LLL_firstorder_Mean, with an accuracy of 86%, a sensitivity of 91%, and a specificity of 65%. The best performance in differentiating the mucinous type of tumor was original_firstorder_RobustMeanAbsoluteDeviation, with an accuracy of 88%, a sensitivity of 42%, and a specificity of 100%. The best performance in identifying tumor recurrence was the wavelet_HLH_glcm_Idmn, with an accuracy of 85%, a sensitivity of 81%, and a specificity of 88%. The best linear regression model was obtained with the identification of recurrence considering the linear combination of the 16 significant textural metrics (accuracy of 97%, sensitivity of 94%, and specificity of 98%). The best performance for each outcome was reached using KNN as a classifier with an accuracy greater than 86% in the training and validation sets for each classification problem; the best results were obtained with the identification of tumor front growth considering the seven significant textural features (accuracy of 97%, sensitivity of 90%, and specificity of 100%). Conclusions: This study confirmed the capacity of radiomics data to identify several prognostic features that may affect the treatment choice in patients with liver metastases, in order to obtain a more personalized approach. Full article
(This article belongs to the Special Issue Radiology and Imaging of Cancer)
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