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5,242 Results Found

  • Review
  • Open Access
22 Citations
7,718 Views
37 Pages

Choosing the Probe for Single-Molecule Fluorescence Microscopy

  • Chiara Schirripa Spagnolo and
  • Stefano Luin

29 November 2022

Probe choice in single-molecule microscopy requires deeper evaluations than those adopted for less sensitive fluorescence microscopy studies. Indeed, fluorophore characteristics can alter or hide subtle phenomena observable at the single-molecule lev...

  • Review
  • Open Access
7 Citations
8,061 Views
28 Pages

DNA Manipulation and Single-Molecule Imaging

  • Shunsuke Takahashi,
  • Masahiko Oshige and
  • Shinji Katsura

17 February 2021

DNA replication, repair, and recombination in the cell play a significant role in the regulation of the inheritance, maintenance, and transfer of genetic information. To elucidate the biomolecular mechanism in the cell, some molecular models of DNA r...

  • Feature Paper
  • Review
  • Open Access
4 Citations
5,963 Views
15 Pages

3 December 2022

Understanding chemical processes at the single-molecule scale represents the ultimate limit of analytical chemistry. Single-molecule detection techniques allow one to reveal the detailed dynamics and kinetics of a chemical reaction with unprecedented...

  • Review
  • Open Access
13 Citations
6,063 Views
12 Pages

Single-Molecule Imaging in Living Plant Cells: A Methodological Review

  • Ai-Yu Guo,
  • Ya-Mei Zhang,
  • Liu Wang,
  • Di Bai,
  • Ya-Peng Xu and
  • Wen-Qiang Wu

Single-molecule imaging is emerging as a revolutionary approach to studying fundamental questions in plants. However, compared with its use in animals, the application of single-molecule imaging in plants is still underexplored. Here, we review the a...

  • Feature Paper
  • Review
  • Open Access
21 Citations
8,420 Views
15 Pages

Investigation on Single-Molecule Junctions Based on Current–Voltage Characteristics

  • Yuji Isshiki,
  • Yuya Matsuzawa,
  • Shintaro Fujii and
  • Manabu Kiguchi

2 February 2018

The relationship between the current through an electronic device and the voltage across its terminals is a current–voltage characteristic (IV) that determine basic device performance. Currently, IV measurement on a single-molecule scale can be per...

  • Review
  • Open Access
48 Citations
10,678 Views
23 Pages

15 April 2021

The rapid spread of epidemic diseases (i.e., coronavirus disease 2019 (COVID-19)) has contributed to focus global attention on the diagnosis of medical conditions by ultrasensitive detection methods. To overcome this challenge, increasing efforts hav...

  • Review
  • Open Access
10 Citations
5,455 Views
16 Pages

3 December 2019

Homologous recombination (HR) is a complex biological process and is central to meiosis and for repair of DNA double-strand breaks. Although the HR process has been the subject of intensive study for more than three decades, the complex protein&ndash...

  • Review
  • Open Access
82 Citations
12,119 Views
16 Pages

Single-Molecule Surface-Enhanced Raman Spectroscopy

  • Yuxuan Qiu,
  • Cuifang Kuang,
  • Xu Liu and
  • Longhua Tang

29 June 2022

Single-molecule surface-enhanced Raman spectroscopy (SM-SERS) has the potential to detect single molecules in a non-invasive, label-free manner with high-throughput. SM-SERS can detect chemical information of single molecules without statistical aver...

  • Article
  • Open Access
11 Citations
3,094 Views
12 Pages

Mapping DNA Conformations Using Single-Molecule Conductance Measurements

  • Mashari Alangari,
  • Busra Demir,
  • Caglanaz Akin Gultakti,
  • Ersin Emre Oren and
  • Joshua Hihath

8 January 2023

DNA is an attractive material for a range of applications in nanoscience and nanotechnology, and it has recently been demonstrated that the electronic properties of DNA are uniquely sensitive to its sequence and structure, opening new opportunities f...

  • Review
  • Open Access
77 Citations
19,412 Views
42 Pages

A Starting Point for Fluorescence-Based Single-Molecule Measurements in Biomolecular Research

  • Alexander Gust,
  • Adrian Zander,
  • Andreas Gietl,
  • Phil Holzmeister,
  • Sarah Schulz,
  • Birka Lalkens,
  • Philip Tinnefeld and
  • Dina Grohmann

30 September 2014

Single-molecule fluorescence techniques are ideally suited to provide information about the structure-function-dynamics relationship of a biomolecule as static and dynamic heterogeneity can be easily detected. However, what type of single-molecule fl...

  • Review
  • Open Access
25 Citations
7,693 Views
20 Pages

Recent Advances in Single-Molecule Sensors Based on STM Break Junction Measurements

  • Shan-Ling Lv,
  • Cong Zeng,
  • Zhou Yu,
  • Ju-Fang Zheng,
  • Ya-Hao Wang,
  • Yong Shao and
  • Xiao-Shun Zhou

26 July 2022

Single-molecule recognition and detection with the highest resolution measurement has been one of the ultimate goals in science and engineering. Break junction techniques, originally developed to measure single-molecule conductance, recently have als...

  • Article
  • Open Access
2 Citations
2,373 Views
11 Pages

Hydroxyl Group as the ‘Bridge’ to Enhance the Single-Molecule Conductance by Hyperconjugation

  • Xin Lv,
  • Chang Li,
  • Meng-Meng Guo,
  • Wenjing Hong,
  • Li-Chuan Chen,
  • Qian-Chong Zhang and
  • Zhong-Ning Chen

For designing single-molecule devices that have both conjugation systems and structural flexibility, a hyperconjugated molecule with a σ–π bond interaction is considered an ideal candidate. In the investigation of conductance at the si...

  • Communication
  • Open Access
16 Citations
3,161 Views
6 Pages

The Separation of the Mn12 Single-Molecule Magnets onto Spherical Silica Nanoparticles

  • Lukasz Laskowski,
  • Iwan Kityk,
  • Piotr Konieczny,
  • Oleksandr Pastukh,
  • Mateusz Schabikowski and
  • Magdalena Laskowska

The Mn12 single-molecule magnets (SMMs) could be attached to the surface of spherical silica for the first time with a high probability. This allowed separation of the individual molecular magnets and direct microscopic observation of the SMMs. We de...

  • Communication
  • Open Access
4 Citations
2,919 Views
8 Pages

Single-Chain Mechanical Properties of Gelatin: A Single-Molecule Study

  • Lu Qian,
  • Kai Zhang,
  • Xin Guo,
  • Junyu Zhou and
  • Miao Yu

23 February 2022

Gelatin is an important natural biological resource with a wide range of applications in the pharmaceutical, industrial and food industries. We investigated the single-chain behaviors of gelatin by atomic force microscopy (AFM)-based single-molecule...

  • Feature Paper
  • Review
  • Open Access
60 Citations
17,192 Views
31 Pages

Beyond being the repository of genetic information, DNA is playing an increasingly important role as a building block for molecular electronics. Its inherent structural and molecular recognition properties render it a leading candidate for molecular...

  • Article
  • Open Access
4 Citations
3,631 Views
15 Pages

Impact of Molecule Concentration, Diffusion Rates and Surface Passivation on Single-Molecule Fluorescence Studies in Solution

  • Olessya Yukhnovets,
  • Henning Höfig,
  • Nuno Bustorff,
  • Alexandros Katranidis and
  • Jörg Fitter

18 March 2022

For single-molecule studies in solution, very small concentrations of dye-labelled molecules are employed in order to achieve single-molecule sensitivity. In typical studies with confocal microscopes, often concentrations in the pico-molar regime are...

  • Review
  • Open Access
7 Citations
4,103 Views
23 Pages

Recent Advance in Single-Molecule Fluorescent Biosensors for Tumor Biomarker Detection

  • Jie Zhang,
  • Jiawen Liu,
  • Lixue Qiao,
  • Qian Zhang,
  • Juan Hu and
  • Chun-yang Zhang

7 November 2024

The construction of biosensors for specific, sensitive, and rapid detection of tumor biomarkers significantly contributes to biomedical research and early cancer diagnosis. However, conventional assays often involve large sample consumption and poor...

  • Review
  • Open Access
3 Citations
4,383 Views
17 Pages

Research on Electric Field—Induced Catalysis Using Single—Molecule Electrical Measurement

  • Jieyao Lv,
  • Ruiqin Sun,
  • Qifan Yang,
  • Pengfei Gan,
  • Shiyong Yu and
  • Zhibing Tan

24 June 2023

The role of catalysis in controlling chemical reactions is crucial. As an important external stimulus regulatory tool, electric field (EF) catalysis enables further possibilities for chemical reaction regulation. To date, the regulation mechanism of...

  • Article
  • Open Access
6 Citations
3,614 Views
9 Pages

Super-Resolution Image Reconstruction Based on Single-Molecule Localization Algorithm

  • Lixin Liu,
  • Meijie Qi,
  • Yujie Liu,
  • Xinzhu Xue,
  • Danni Chen and
  • Junle Qu

Fluorescence imaging is an important and efficient tool in cell biology and biomedical research. In order to observe the dynamics of biological macromolecules such as DNA, RNA and proteins in live cells, it is extremely necessary to surpass the Abbe...

  • Review
  • Open Access
14 Citations
13,905 Views
24 Pages

Experimental and Computational Characterization of Biological Liquid Crystals: A Review of Single-Molecule Bioassays

  • Kilho Eom,
  • Jaemoon Yang,
  • Jinsung Park,
  • Gwonchan Yoon,
  • Young Soo Sohn,
  • Shinsuk Park,
  • Dae Sung Yoon,
  • Sungsoo Na and
  • Taeyun Kwon

10 September 2009

Quantitative understanding of the mechanical behavior of biological liquid crystals such as proteins is essential for gaining insight into their biological functions, since some proteins perform notable mechanical functions. Recently, single-molecule...

  • Article
  • Open Access
1 Citations
2,511 Views
19 Pages

22 October 2021

Single-molecule force spectroscopy experiments allow protein folding and unfolding to be explored using mechanical force. Probably the most informative technique for interpreting the results of these experiments at the structural level makes use of s...

  • Review
  • Open Access
2 Citations
4,275 Views
18 Pages

The Research Progress of Single-Molecule Sequencing and Its Significance in Nucleic Acid Metrology

  • Yajun Wang,
  • Jingjing Liu,
  • Zhendong Wang,
  • Mei Zhang and
  • Yongzhuo Zhang

25 December 2024

Single-molecule sequencing technology, a novel method for gene sequencing, utilizes nano-sized materials to detect electrical and fluorescent signals. Compared to traditional Sanger sequencing and next-generation sequencing technologies, it offers si...

  • Review
  • Open Access
2,606 Views
18 Pages

Single-Molecule Detection of Optical Signals Using DNA-Based Plasmonic Nanostructures

  • Renjie Niu,
  • Jintian Shao,
  • Mingnan Wu,
  • Chang Liu and
  • Jie Chao

20 June 2025

Single-molecule optical signal detection provides high sensitivity and specificity for the detection of biomolecules and chemical substances, which is of significant importance in fields such as biomedicine, environmental monitoring, and materials sc...

  • Review
  • Open Access
42 Citations
13,067 Views
34 Pages

13 August 2014

Single-molecule fluorescence microscopy enables biological investigations inside living cells to achieve millisecond- and nanometer-scale resolution. Although single-molecule-based methods are becoming increasingly accessible to non-experts, optimiz...

  • Review
  • Open Access
6 Citations
4,494 Views
24 Pages

30 April 2025

Single-molecule fluorescence technology stands at the forefront of scientific research as a sophisticated tool, pushing the boundaries of our understanding. This review comprehensively summarizes the technological advancements in single-molecule fluo...

  • Review
  • Open Access
9 Citations
5,640 Views
20 Pages

31 January 2022

A comprehensive detection of a wide variety of diagnostic markers is required for the realization of personalized medicine. As a sensor to realize such personalized medicine, a single molecule electrical measurement method using nanodevices is curren...

  • Review
  • Open Access
38 Citations
7,827 Views
43 Pages

Smart Ligands for Efficient 3d-, 4d- and 5d-Metal Single-Molecule Magnets and Single-Ion Magnets

  • Panagiota S. Perlepe,
  • Diamantoula Maniaki,
  • Evangelos Pilichos,
  • Eugenia Katsoulakou and
  • Spyros P. Perlepes

There has been a renaissance in the interdisciplinary field of Molecular Magnetism since ~2000, due to the discovery of the impressive properties and potential applications of d- and f-metal Single-Molecule Magnets (SMMs) and Single-Ion Magnets (SIMs...

  • Article
  • Open Access
16 Citations
5,532 Views
18 Pages

Tuning Single-Molecule Conductance by Controlled Electric Field-Induced trans-to-cis Isomerisation

  • C.S. Quintans,
  • Denis Andrienko,
  • Katrin F. Domke,
  • Daniel Aravena,
  • Sangho Koo,
  • Ismael Díez-Pérez and
  • Albert C. Aragonès

7 April 2021

External electric fields (EEFs) have proven to be very efficient in catalysing chemical reactions, even those inaccessible via wet-chemical synthesis. At the single-molecule level, oriented EEFs have been successfully used to promote in situ single-m...

  • Article
  • Open Access
2,611 Views
14 Pages

Microfluidic devices have been extensively investigated in recent years in fields including ligand-binding analysis, chromatographic separation, molecular dynamics, and DNA sequencing. To prolong the observation of a single molecule in aqueous buffer...

  • Review
  • Open Access
131 Citations
19,806 Views
40 Pages

Single Molecule Electronics and Devices

  • Makusu Tsutsui and
  • Masateru Taniguchi

30 May 2012

The manufacture of integrated circuits with single-molecule building blocks is a goal of molecular electronics. While research in the past has been limited to bulk experiments on self-assembled monolayers, advances in technology have now enabled us t...

  • Review
  • Open Access
10 Citations
7,792 Views
20 Pages

Trends in Single-Molecule Total Internal Reflection Fluorescence Imaging and Their Biological Applications with Lab-on-a-Chip Technology

  • Louis Colson,
  • Youngeun Kwon,
  • Soobin Nam,
  • Avinashi Bhandari,
  • Nolberto Martinez Maya,
  • Ying Lu and
  • Yongmin Cho

6 September 2023

Single-molecule imaging technologies, especially those based on fluorescence, have been developed to probe both the equilibrium and dynamic properties of biomolecules at the single-molecular and quantitative levels. In this review, we provide an over...

  • Article
  • Open Access
2 Citations
2,424 Views
16 Pages

17 December 2023

The microfluidic droplet polymerase chain reaction (PCR), which enables simultaneous DNA amplification in numerous droplets, has led to the discovery of various applications that were previously deemed unattainable. Decades ago, it was demonstrated t...

  • Article
  • Open Access
10 Citations
3,981 Views
14 Pages

31 October 2020

We utilized electrophoresis to control the fluidity of sample biomolecules in sample aqueous solutions inside the nanochannel for single-molecule detection by using a nanochannel-integrated nanogap electrode, which is composed of a nano-gap sensing e...

  • Review
  • Open Access
1 Citations
2,237 Views
19 Pages

30 October 2025

Nanopores have emerged as powerful tools for single-molecule detection, enabling real-time analysis across diverse applications in genomics and molecular diagnostics. While natural pores laid the foundation for single-molecule detection, their limite...

  • Article
  • Open Access
3 Citations
3,954 Views
20 Pages

The plasma membrane consists of a diverse mixture of molecules that dynamically assemble into a highly non-random organization. The formation of nanoscale domains in the membrane is of particular interest as these domains underlie critical cellular f...

  • Review
  • Open Access
67 Citations
12,320 Views
32 Pages

Optical Methods to Study Protein-DNA Interactions in Vitro and in Living Cells at the Single-Molecule Level

  • Carina Monico,
  • Marco Capitanio,
  • Gionata Belcastro,
  • Francesco Vanzi and
  • Francesco S. Pavone

18 February 2013

The maintenance of intact genetic information, as well as the deployment of transcription for specific sets of genes, critically rely on a family of proteins interacting with DNA and recognizing specific sequences or features. The mechanisms by which...

  • Feature Paper
  • Review
  • Open Access
4 Citations
2,688 Views
22 Pages

23 November 2023

Functional dependence of the axial zero-field splitting parameter D with respect to a properly chosen geometrical parameter (Dstr) in metal complexes is termed the magnetostructural D-correlation. In mononuclear hexacoordinate Ni(II) complexes with t...

  • Article
  • Open Access
16 Citations
6,708 Views
8 Pages

Dysprosium Acetylacetonato Single-Molecule Magnet Encapsulated in Carbon Nanotubes

  • Ryo Nakanishi,
  • Mudasir Ahmad Yatoo,
  • Keiichi Katoh,
  • Brian K. Breedlove and
  • Masahiro Yamashita

23 December 2016

Dy single-molecule magnets (SMMs), which have several potential uses in a variety of applications, such as quantum computing, were encapsulated in multi-walled carbon nanotubes (MWCNTs) by using a capillary method. Encapsulation was confirmed by usin...

  • Review
  • Open Access
2 Citations
6,971 Views
19 Pages

21 November 2022

Protein amyloid aggregation has been associated with more than 50 human disorders, including the most common neurodegenerative disorders Alzheimer’s and Parkinson’s disease. Interfering with this process is considered as a promising thera...

  • Review
  • Open Access
17 Citations
6,748 Views
32 Pages

1 February 2023

Single-stranded DNA-binding proteins (SSBs) play vital roles in DNA metabolism. Proteins of the SSB family exclusively and transiently bind to ssDNA, preventing the DNA double helix from re-annealing and maintaining genome integrity. In the meantime,...

  • Communication
  • Open Access
14 Citations
2,947 Views
9 Pages

How to Control the Distribution of Anchored, Mn12–Stearate, Single-Molecule Magnets

  • Magdalena Laskowska,
  • Oleksandr Pastukh,
  • Dominika Kuźma and
  • Łukasz Laskowski

4 December 2019

Controlling the distribution of the Mn12–stearate, single-molecule magnets (SMMs) anchored on a select surface is expected to be a new method for tuning its interactions, and an investigation on the magnetic properties of separated magnetic mol...

  • Review
  • Open Access
20 Citations
7,402 Views
18 Pages

Theoretical calculation plays an important role in the emerging field of single-molecule magnets (SMMs). It can not only explain experimental phenomena but also provide synthetic guidance. This review focuses on discussing the computational methods t...

  • Article
  • Open Access
1,027 Views
23 Pages

Solid-State Nanopore Single-Molecule Analysis of SARS-CoV-2 N Protein: From Interaction Exploration to Small-Molecule Antagonism

  • Xiaoqing Zeng,
  • Shinian Leng,
  • Wenhao Ma,
  • Zhenxin Wang,
  • Huaming Zhang,
  • Xiaowei Feng,
  • Jianchao Li,
  • Junsen Wang,
  • Ting Weng and
  • Deqiang Wang
  • + 6 authors

10 November 2025

The COVID-19 pandemic caused by the SARS-CoV-2 virus has exposed the urgency of research on rapid and efficient virus detection and strategies to inhibit its replication. Previous studies have mostly focused on traditional immunoassay or optical meth...

  • Review
  • Open Access
1 Citations
2,537 Views
30 Pages

21 October 2025

Recent advances in nanotechnology and optical imaging have transformed molecular diagnostics, enabling the detection and analysis of individual biomolecules with unprecedented precision. Nanobiosensors provide ultrasensitive molecular detection, and...

  • Communication
  • Open Access
19 Citations
6,313 Views
7 Pages

8 November 2020

Single-molecule fluorescence energy transfer (FRET) detection has become a key technique to monitor intra- and intermolecular distance changes in biological processes. As the sensitive detection range of conventional FRET pairs is limited to 3–...

  • Proceeding Paper
  • Open Access
1,201 Views
2 Pages

11 November 2020

In this paper, the main issues concerning the possibility of the organization of Mn12-based single-molecule magnets (SMMs) on the surface of silica nanostructures with the preservation of its structure and magnetic properties were summarized. The agi...

  • Perspective
  • Open Access
21 Citations
9,133 Views
17 Pages

Lanthanide-Based Metal–Organic Frameworks with Single-Molecule Magnet Properties

  • Fabio Manna,
  • Mariangela Oggianu,
  • Narcis Avarvari and
  • Maria Laura Mercuri

Lanthanide metal–organic frameworks (Ln-MOFs) showing single-molecule magnet (SMM) properties are an ever-growing family of materials where the magnetic properties can be tuned by various interrelated parameters, such as the coordinated solvent...

  • Article
  • Open Access
1 Citations
3,227 Views
10 Pages

Single–Molecule Study of DNAzyme Reveals Its Intrinsic Conformational Dynamics

  • Yiming Zhang,
  • Zongzhou Ji,
  • Xin Wang,
  • Yi Cao and
  • Hai Pan

DNAzyme is a class of DNA molecules that can perform catalytic functions with high selectivity towards specific metal ions. Due to its potential applications for biosensors and medical therapeutics, DNAzyme has been extensively studied to characteriz...

  • Article
  • Open Access
9 Citations
3,122 Views
23 Pages

Design of Pyrrole-Based Gate-Controlled Molecular Junctions Optimized for Single-Molecule Aflatoxin B1 Detection

  • Fabrizio Mo,
  • Chiara Elfi Spano,
  • Yuri Ardesi,
  • Massimo Ruo Roch,
  • Gianluca Piccinini and
  • Mariagrazia Graziano

3 February 2023

Food contamination by aflatoxins is an urgent global issue due to its high level of toxicity and the difficulties in limiting the diffusion. Unfortunately, current detection techniques, which mainly use biosensing, prevent the pervasive monitoring of...

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