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Keywords = respiratory state recognition

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12 pages, 3422 KB  
Article
Improved Pressure Sensing Performance of Self-Powered Electrochemical Pressure Sensor Using a Simple Electrode Coplanar Structure
by Yixue Han, Zaihua Duan, Yi Wang, Weidong Chen, Di Liu, Zhen Yuan, Yadong Jiang and Huiling Tai
Sensors 2026, 26(2), 699; https://doi.org/10.3390/s26020699 - 21 Jan 2026
Abstract
In recent years, electrochemical pressure (ECP) sensors with self-powered and both dynamic and static pressure detection capabilities have received widespread attention. To improve pressure sensing performances while reducing the thickness of conventional sandwich structure ECP sensors, we propose an ECP sensor with a [...] Read more.
In recent years, electrochemical pressure (ECP) sensors with self-powered and both dynamic and static pressure detection capabilities have received widespread attention. To improve pressure sensing performances while reducing the thickness of conventional sandwich structure ECP sensors, we propose an ECP sensor with a simple electrode coplanar structure. Specifically, it consists of Cu/Zn foil electrodes and LiCl/polyvinyl alcohol (PVA) modified filter paper. Among them, the Cu/Zn coplanar electrodes are used for redox reactions, the LiCl provides conductive ions, and the PVA is used to provide a humid environment to promote the ionization and conduction of LiCl. The rough surface microstructure of the filter paper is used to enhance the pressure sensing performances of the sensor. The results show that the ECP sensor with an electrode coplanar structure can spontaneously output current in the pressure range of 0.4–100 kPa, with sensitivities of 0.273 kPa−1 (0.6–20 kPa) and 0.036 kPa−1 (20–100 kPa). Specifically, compared to ECP sensors with a sandwich structure, it has a wider response range and higher sensitivity. Through the current response, morphological characterizations, and redox reactions, the pressure sensing mechanism is elucidated. Furthermore, the proposed ECP sensor can be used for respiratory state recognition combined with machine learning. This research provides a new approach for developing a high-performance ECP sensor with a simple electrode coplanar structure. Full article
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17 pages, 1465 KB  
Article
A Signal Normalization Approach for Robust Driving Stress Assessment Using Multi-Domain Physiological Data
by Damiano Fruet, Chiara Barà, Riccardo Pernice, Marta Iovino, Luca Faes and Giandomenico Nollo
Eng 2025, 6(11), 288; https://doi.org/10.3390/eng6110288 - 28 Oct 2025
Viewed by 565
Abstract
Objective: Stress recognition is a widely investigated and debated area in biomedical research. Physiological monitoring has gained increasing attention as one of the methodologies used to assess an individual’s stress level. In this study, we investigated the effectiveness of a novel normalization technique [...] Read more.
Objective: Stress recognition is a widely investigated and debated area in biomedical research. Physiological monitoring has gained increasing attention as one of the methodologies used to assess an individual’s stress level. In this study, we investigated the effectiveness of a novel normalization technique applied to multi-domain physiological data for the objective classification of stress levels using a feature extraction approach. Methods: Electrocardiographic (ECG) and respiratory data from a publicly available database, collected from drivers experiencing various stress levels, underwent a novel inter-subject normalization procedure. This method involved adjusting the time scale of the original data to a common scale across subjects according to fixed resting heart and respiratory rates. Subsequently, a feature-based stress state classification procedure was conducted using the Support Vector Machine (SVM) algorithm. The efficacy of this inter-subject normalization procedure was assessed by comparing the classification results obtained using features from the original signals with those obtained from the inter-subject-normalized signals. Additionally, the inter-subject normalization procedure was compared with two common feature normalization approaches: standardization and scaling. Results: Features derived from the subject-normalized signals yielded improved performance, significantly enhancing accuracy from 68% to 73%, as well as precision and sensitivity. Conclusions: The novel inter-subject normalization procedure proves to be an effective technique for highlighting differences in features among various stress states and for mitigating basal physiological variability across subjects. Significance: Using inter-subject normalization on multi-domain physiological signals holds promise as a method to improve multilevel stress classification through feature extraction, ensuring that the features maintain their correspondence even after the normalization process. Full article
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13 pages, 1627 KB  
Technical Note
Development and Optimization of Multi-Well Colorimetric Assays for Growth of Coccidioides posadasii Spherules and Their Application in Large-Scale Screening
by Augusto Vazquez-Rodriguez, Jieh-Juen Yu, Chiung-Yu Hung and Jose L. Lopez-Ribot
J. Fungi 2025, 11(10), 733; https://doi.org/10.3390/jof11100733 - 11 Oct 2025
Cited by 1 | Viewed by 786
Abstract
Coccidioides immitis and Coccidioides posadasii, the causative agents of coccidioidomycosis, represent a major public health concern in endemic regions of North and South America. The disease spectrum ranges from mild respiratory illness to severe disseminated infections, with thousands of cases reported annually [...] Read more.
Coccidioides immitis and Coccidioides posadasii, the causative agents of coccidioidomycosis, represent a major public health concern in endemic regions of North and South America. The disease spectrum ranges from mild respiratory illness to severe disseminated infections, with thousands of cases reported annually in the United States and an increasing recognition of its global impact. Despite existing antifungal therapies, treatment remains challenging due to toxicity, drug resistance, and limited therapeutic options. High-throughput screening platforms have revolutionized drug discovery for infectious diseases; however, progress in antifungal screening for Coccidioides spp. has been hampered by the requirement for Biosafety Level 3 (BSL-3) containment. To overcome these barriers, we leveraged an attenuated C. posadasii strain that can be safely handled under BSL-2 conditions. Here, we describe the development and optimization of 96-well and 384-well plate screening methodologies, providing a safer and more efficient platform for antifungal discovery. This approach enhances the feasibility of large-scale screening efforts and may facilitate the identification of novel therapeutics for coccidioidomycosis. Full article
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22 pages, 667 KB  
Review
Analysis of Physiological Parameters and Driver Posture for Prevention of Road Accidents: A Review
by Alparslan Babur, Ali Moukadem, Alain Dieterlen and Katrin Skerl
Sensors 2025, 25(19), 6238; https://doi.org/10.3390/s25196238 - 8 Oct 2025
Viewed by 1192
Abstract
This review provides an overview of existing accident prevention methods by monitoring the persons’ physiological state, observing movements, and physiological parameters. Firstly, different physiological parameters monitoring systems are introduced. Secondly, various systems dealing with position recognition on pressure sensing mats are presented. We [...] Read more.
This review provides an overview of existing accident prevention methods by monitoring the persons’ physiological state, observing movements, and physiological parameters. Firstly, different physiological parameters monitoring systems are introduced. Secondly, various systems dealing with position recognition on pressure sensing mats are presented. We conduct an in-depth literature search and quantitative analysis of papers published in this area and focus independently of the application (drivers, office and wheelchair users, etc.). Quantitative information about the number of subjects, investigated scenarios, sensor types, machine learning usage, and laboratory vs. real-world works is extracted. In posture recognition, most works recognize at least forward, backward, left and right movements on a seat. The remaining works use the pressure sensing mat for bedridden people. In physiological parameters measurement, most works detect the heart rate and often also add respiration rate recognition. Machine learning algorithms are used in most cases and are taking on an ever-greater importance for classification and regression problems. Although all solutions use different techniques, returning satisfactory results, none of them try to detect small movements, which can pose challenges in determining the optimal sensor topology and sampling frequency required to detect fine movements. For physiological measurements, there are lots of challenges to overcome in noisy environments, notably the detection of heart rate, blood pressure, and respiratory rate at very low signal-to-noise levels. Full article
(This article belongs to the Section Biomedical Sensors)
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31 pages, 529 KB  
Review
Advances and Challenges in Respiratory Sound Analysis: A Technique Review Based on the ICBHI2017 Database
by Shaode Yu, Jieyang Yu, Lijun Chen, Bing Zhu, Xiaokun Liang, Yaoqin Xie and Qiurui Sun
Electronics 2025, 14(14), 2794; https://doi.org/10.3390/electronics14142794 - 11 Jul 2025
Cited by 2 | Viewed by 5350
Abstract
Respiratory diseases present significant global health challenges. Recent advances in respiratory sound analysis (RSA) have shown great potential for automated disease diagnosis and patient management. The International Conference on Biomedical and Health Informatics 2017 (ICBHI2017) database stands as one of the most authoritative [...] Read more.
Respiratory diseases present significant global health challenges. Recent advances in respiratory sound analysis (RSA) have shown great potential for automated disease diagnosis and patient management. The International Conference on Biomedical and Health Informatics 2017 (ICBHI2017) database stands as one of the most authoritative open-access RSA datasets. This review systematically examines 135 technical publications utilizing the database, and a comprehensive and timely summary of RSA methodologies is offered for researchers and practitioners in this field. Specifically, this review covers signal processing techniques including data resampling, augmentation, normalization, and filtering; feature extraction approaches spanning time-domain, frequency-domain, joint time–frequency analysis, and deep feature representation from pre-trained models; and classification methods for adventitious sound (AS) categorization and pathological state (PS) recognition. Current achievements for AS and PS classification are summarized across studies using official and custom data splits. Despite promising technique advancements, several challenges remain unresolved. These include a severe class imbalance in the dataset, limited exploration of advanced data augmentation techniques and foundation models, a lack of model interpretability, and insufficient generalization studies across clinical settings. Future directions involve multi-modal data fusion, the development of standardized processing workflows, interpretable artificial intelligence, and integration with broader clinical data sources to enhance diagnostic performance and clinical applicability. Full article
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63 pages, 4863 KB  
Review
Immunity and Coagulation in COVID-19
by Piotr P. Avdonin, Maria S. Blinova, Anastasia A. Serkova, Lidia A. Komleva and Pavel V. Avdonin
Int. J. Mol. Sci. 2024, 25(20), 11267; https://doi.org/10.3390/ijms252011267 - 19 Oct 2024
Cited by 9 | Viewed by 5453
Abstract
Discovered in late 2019, the SARS-CoV-2 coronavirus has caused the largest pandemic of the 21st century, claiming more than seven million lives. In most cases, the COVID-19 disease caused by the SARS-CoV-2 virus is relatively mild and affects only the upper respiratory tract; [...] Read more.
Discovered in late 2019, the SARS-CoV-2 coronavirus has caused the largest pandemic of the 21st century, claiming more than seven million lives. In most cases, the COVID-19 disease caused by the SARS-CoV-2 virus is relatively mild and affects only the upper respiratory tract; it most often manifests itself with fever, chills, cough, and sore throat, but also has less-common mild symptoms. In most cases, patients do not require hospitalization, and fully recover. However, in some cases, infection with the SARS-CoV-2 virus leads to the development of a severe form of COVID-19, which is characterized by the development of life-threatening complications affecting not only the lungs, but also other organs and systems. In particular, various forms of thrombotic complications are common among patients with a severe form of COVID-19. The mechanisms for the development of thrombotic complications in COVID-19 remain unclear. Accumulated data indicate that the pathogenesis of severe COVID-19 is based on disruptions in the functioning of various innate immune systems. The key role in the primary response to a viral infection is assigned to two systems. These are the pattern recognition receptors, primarily members of the toll-like receptor (TLR) family, and the complement system. Both systems are the first to engage in the fight against the virus and launch a whole range of mechanisms aimed at its rapid elimination. Normally, their joint activity leads to the destruction of the pathogen and recovery. However, disruptions in the functioning of these innate immune systems in COVID-19 can cause the development of an excessive inflammatory response that is dangerous for the body. In turn, excessive inflammation entails activation of and damage to the vascular endothelium, as well as the development of the hypercoagulable state observed in patients seriously ill with COVID-19. Activation of the endothelium and hypercoagulation lead to the development of thrombosis and, as a result, damage to organs and tissues. Immune-mediated thrombotic complications are termed “immunothrombosis”. In this review, we discuss in detail the features of immunothrombosis associated with SARS-CoV-2 infection and its potential underlying mechanisms. Full article
(This article belongs to the Special Issue New Advances in Molecular Research of Coronavirus)
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8 pages, 252 KB  
Review
Utility of Raman Spectroscopy in Pulmonary Medicine
by Pauls Dzelve, Arta Legzdiņa, Andra Krūmiņa and Madara Tirzīte
Adv. Respir. Med. 2024, 92(5), 421-428; https://doi.org/10.3390/arm92050038 - 18 Oct 2024
Cited by 4 | Viewed by 2063
Abstract
The Raman effect, or as per its original description, “modified scattering”, is an observation that the number of scattered light waves shifts after photons make nonelastic contact with a molecule. This effect allows Raman spectroscopy to be very useful in various fields. Although [...] Read more.
The Raman effect, or as per its original description, “modified scattering”, is an observation that the number of scattered light waves shifts after photons make nonelastic contact with a molecule. This effect allows Raman spectroscopy to be very useful in various fields. Although it is well known that Raman spectroscopy could be very beneficial in medicine as a diagnostic tool, there are not many applications of Raman spectroscopy in pulmonary medicine. Mostly tumor tissue, sputum and saliva have been used as material for analysis in respiratory medicine. Raman spectroscopy has shown promising results in malignancy recognition and even tumor staging. Saliva is a biological fluid that could be used as a reliable biomarker of the physiological state of the human body, and is easily acquired. Saliva analysis using Raman spectroscopy has the potential to be a relatively inexpensive and quick tool that could be used for diagnostic, screening and phenotyping purposes. Chronic obstructive pulmonary disease (COPD) is a growing cause of disability and death, and its phenotyping using saliva analysis via Raman spectroscopy has a great potential to be a dependable tool to, among other things, help reduce hospitalizations and disease burden. Although existing methods are effective and generally available, Raman spectroscopy has the benefit of being quick and noninvasive, potentially reducing healthcare costs and workload. Full article
27 pages, 5919 KB  
Article
CO2 Concentration Assessment for Infection Monitoring and Occupancy Analysis in Tanzanian COVID-19 Isolation Centers
by Benson Vedasto Karumuna and Long Hao
Buildings 2024, 14(7), 2139; https://doi.org/10.3390/buildings14072139 - 11 Jul 2024
Cited by 3 | Viewed by 2371
Abstract
Monitoring of IAQ is one of the foundations of the preventative actions prompted by the worldwide recognition of COVID-19 transmission. The measurement of CO2 has emerged as one of the most popular, dependable, and easy ways to indirectly evaluate the state of [...] Read more.
Monitoring of IAQ is one of the foundations of the preventative actions prompted by the worldwide recognition of COVID-19 transmission. The measurement of CO2 has emerged as one of the most popular, dependable, and easy ways to indirectly evaluate the state of indoor air renewal. Reducing the risk of respiratory diseases transmitted by aerosols is attainable through implementing and validating prevention measures made possible by CO2 control. Isolation centers are like health facilities in that they are linked to IAQ, and the presence of natural ventilation can significantly improve the circulation of fresh air, which speeds up the removal of contaminants. This is true even though healthcare facilities are among the environments with the highest rate of COVID-19 propagation. Our investigation revealed, however, that no substantial critical data on air quality in Tanzanian isolation centers is presently available. The process of metabolic CO₂ creation and accumulation within health isolation center cubicles was investigated in this study. Crucially, we suggest comparing settings under various conditions using the indicator ppm/patient. In this research, we experimentally assessed the value of changing a few HVAC system characteristics. We looked at the data to see how well the filtration system worked concerning the submicron particle concentration. Study recommendations for CO2 detectors and ways to reduce infection risk in shared isolation center cubicles are provided. We also show the correlation between particle size and CO2 concentration, the correlation between CO2 concentration derivatives and air volume presented per patient in isolation cubicles, the correlation between patient occupancy and CO2 concentration levels in isolation cubicles, and how to improve air quality by adjusting the patient’s bed position. The study also found that for exposure lengths of two to three hours, a typical hospital cubicle with fifty to one hundred people should have an average interior CO₂ value of less than 900 ppm. Carers’ length of stay in the hospital substantially impacted the permissible CO2 concentration. By establishing a connection between indoor air monitoring and healthcare goals, this study will aid in determining the feasibility of establishing regulations for interior CO2 content depending on occupancy settings, strengthening preventive efforts against COVID-19. In the post-pandemic era, it will be essential to find ways to make health facilities air cleaner so that infectious diseases cannot spread in the future. Full article
(This article belongs to the Section Building Energy, Physics, Environment, and Systems)
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9 pages, 289 KB  
Article
ADRB2 and ADCY9 Sequence Variations in Brazilian Asthmatic Patients
by Viviane da C. Silva, Raquel L. de F. Teixeira, Rebecca E. E. N. O. do Livramento, Márcia Q. P. Lopes, Thyago Leal-Calvo, José E. Filho, Márcia B. V. Luduvice, Lilian de C. Rodrigues, Marcello Bossois, Patricia F. Schlinkert, Anderson S. Neves, Philip N. Suffys, José Roberto Lapa e Silva and Adalberto R. Santos
Curr. Issues Mol. Biol. 2024, 46(7), 6951-6959; https://doi.org/10.3390/cimb46070414 - 4 Jul 2024
Cited by 2 | Viewed by 1636
Abstract
Asthma is a chronic inflammatory respiratory condition, characterized by variable airflow limitation, leading to clinical symptoms such as dyspnea and chest tightness. These symptoms result from an underlying inflammatory process. The β2 agonists are bronchodilators prescribed for the relief of the disease. Nevertheless, [...] Read more.
Asthma is a chronic inflammatory respiratory condition, characterized by variable airflow limitation, leading to clinical symptoms such as dyspnea and chest tightness. These symptoms result from an underlying inflammatory process. The β2 agonists are bronchodilators prescribed for the relief of the disease. Nevertheless, their efficacy exhibits substantial interindividual variability. Currently, there is widespread recognition of the association between specific genetic variants, predominantly located within the ADRB2 and ADCY9 genes and their efficacy. This association, usually represented by the presence of non-synonymous single nucleotide polymorphisms (SNPs) have a strong impact in the protein functionality. The prevalence of these mutations varies based on the ethnic composition of the population and thus understanding the profiles of variability in different populations would contribute significantly to standardizing the use of these medications. In this study, we conducted a sequence-based genotyping of the relevant SNPs within the ADRB2 and ADCY9 genes in patients undergoing treatment with bronchodilators and/or corticosteroids at two healthcare facilities in the state of Rio de Janeiro, Brazil. We investigated the presence of c.46A>G, c.79C>G, c.252G>A, and c.491C>T SNPs within the ADRB2, and c.1320018 A>G within the ADCY9. Our results were in line with existing literature data with both for individuals in Brazil and Latin American. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
24 pages, 5747 KB  
Review
How Does Airway Surface Liquid Composition Vary in Different Pulmonary Diseases, and How Can We Use This Knowledge to Model Microbial Infections?
by Dean Walsh, Jennifer Bevan and Freya Harrison
Microorganisms 2024, 12(4), 732; https://doi.org/10.3390/microorganisms12040732 - 3 Apr 2024
Cited by 9 | Viewed by 6428
Abstract
Growth environment greatly alters many facets of pathogen physiology, including pathogenesis and antimicrobial tolerance. The importance of host-mimicking environments for attaining an accurate picture of pathogen behaviour is widely recognised. Whilst this recognition has translated into the extensive development of artificial cystic fibrosis [...] Read more.
Growth environment greatly alters many facets of pathogen physiology, including pathogenesis and antimicrobial tolerance. The importance of host-mimicking environments for attaining an accurate picture of pathogen behaviour is widely recognised. Whilst this recognition has translated into the extensive development of artificial cystic fibrosis (CF) sputum medium, attempts to mimic the growth environment in other respiratory disease states have been completely neglected. The composition of the airway surface liquid (ASL) in different pulmonary diseases is far less well characterised than CF sputum, making it very difficult for researchers to model these infection environments. In this review, we discuss the components of human ASL, how different lung pathologies affect ASL composition, and how different pathogens interact with these components. This will provide researchers interested in mimicking different respiratory environments with the information necessary to design a host-mimicking medium, allowing for better understanding of how to treat pathogens causing infection in these environments. Full article
(This article belongs to the Special Issue Microbe–Host Interactions in Human Infections)
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17 pages, 10960 KB  
Article
Deep Learning and YOLOv8 Utilized in an Accurate Face Mask Detection System
by Christine Dewi, Danny Manongga, Hendry, Evangs Mailoa and Kristoko Dwi Hartomo
Big Data Cogn. Comput. 2024, 8(1), 9; https://doi.org/10.3390/bdcc8010009 - 16 Jan 2024
Cited by 18 | Viewed by 8993
Abstract
Face mask detection is a technological application that employs computer vision methodologies to ascertain the presence or absence of a face mask on an individual depicted in an image or video. This technology gained significant attention and adoption during the COVID-19 pandemic, as [...] Read more.
Face mask detection is a technological application that employs computer vision methodologies to ascertain the presence or absence of a face mask on an individual depicted in an image or video. This technology gained significant attention and adoption during the COVID-19 pandemic, as wearing face masks became an important measure to prevent the spread of the virus. Face mask detection helps to enforce mask-wearing guidelines, which can significantly reduce the spread of respiratory illnesses, including COVID-19. Wearing masks in densely populated areas provides individuals with protection and hinders the spread of airborne particles that transmit viruses. The application of deep learning models in object recognition has shown significant progress, leading to promising outcomes in the identification and localization of objects within images. The primary aim of this study is to annotate and classify face mask entities depicted in authentic images. To mitigate the spread of COVID-19 within public settings, individuals can employ the use of face masks created from materials specifically designed for medical purposes. This study utilizes YOLOv8, a state-of-the-art object detection algorithm, to accurately detect and identify face masks. To analyze this study, we conducted an experiment in which we combined the Face Mask Dataset (FMD) and the Medical Mask Dataset (MMD) into a single dataset. The detection performance of an earlier research study using the FMD and MMD was improved by the suggested model to a “Good” level of 99.1%, up from 98.6%. Our study demonstrates that the model scheme we have provided is a reliable method for detecting faces that are obscured by medical masks. Additionally, after the completion of the study, a comparative analysis was conducted to examine the findings in conjunction with those of related research. The proposed detector demonstrated superior performance compared to previous research in terms of both accuracy and precision. Full article
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37 pages, 5183 KB  
Article
Unraveling the Dynamics of Omicron (BA.1, BA.2, and BA.5) Waves and Emergence of the Deltacron Variant: Genomic Epidemiology of the SARS-CoV-2 Epidemic in Cyprus (Oct 2021–Oct 2022)
by Andreas C. Chrysostomou, Bram Vrancken, Christos Haralambous, Maria Alexandrou, Ioanna Gregoriou, Marios Ioannides, Costakis Ioannou, Olga Kalakouta, Christos Karagiannis, Markella Marcou, Christina Masia, Michail Mendris, Panagiotis Papastergiou, Philippos C. Patsalis, Despo Pieridou, Christos Shammas, Dora C. Stylianou, Barbara Zinieri, Philippe Lemey, The COMESSAR Network and Leondios G. Kostrikisadd Show full author list remove Hide full author list
Viruses 2023, 15(9), 1933; https://doi.org/10.3390/v15091933 - 15 Sep 2023
Cited by 9 | Viewed by 4795
Abstract
Commencing in December 2019 with the emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), three years of the coronavirus disease 2019 (COVID-19) pandemic have transpired. The virus has consistently demonstrated a tendency for evolutionary adaptation, resulting in mutations that impact both immune [...] Read more.
Commencing in December 2019 with the emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), three years of the coronavirus disease 2019 (COVID-19) pandemic have transpired. The virus has consistently demonstrated a tendency for evolutionary adaptation, resulting in mutations that impact both immune evasion and transmissibility. This ongoing process has led to successive waves of infections. This study offers a comprehensive assessment spanning genetic, phylogenetic, phylodynamic, and phylogeographic dimensions, focused on the trajectory of the SARS-CoV-2 epidemic in Cyprus. Based on a dataset comprising 4700 viral genomic sequences obtained from affected individuals between October 2021 and October 2022, our analysis is presented. Over this timeframe, a total of 167 distinct lineages and sublineages emerged, including variants such as Delta and Omicron (1, 2, and 5). Notably, during the fifth wave of infections, Omicron subvariants 1 and 2 gained prominence, followed by the ascendancy of Omicron 5 in the subsequent sixth wave. Additionally, during the fifth wave (December 2021–January 2022), a unique set of Delta sequences with genetic mutations associated with Omicron variant 1, dubbed “Deltacron”, was identified. The emergence of this phenomenon initially evoked skepticism, characterized by concerns primarily centered around contamination or coinfection as plausible etiological contributors. These hypotheses were predominantly disseminated through unsubstantiated assertions within the realms of social and mass media, lacking concurrent scientific evidence to validate their claims. Nevertheless, the exhaustive molecular analyses presented in this study have demonstrated that such occurrences would likely lead to a frameshift mutation—a genetic aberration conspicuously absent in our provided sequences. This substantiates the accuracy of our initial assertion while refuting contamination or coinfection as potential etiologies. Comparable observations on a global scale dispelled doubt, eventually leading to the recognition of Delta-Omicron variants by the scientific community and their subsequent monitoring by the World Health Organization (WHO). As our investigation delved deeper into the intricate dynamics of the SARS-CoV-2 epidemic in Cyprus, a discernible pattern emerged, highlighting the major role of international connections in shaping the virus’s local trajectory. Notably, the United States and the United Kingdom were the central conduits governing the entry and exit of the virus to and from Cyprus. Moreover, notable migratory routes included nations such as Greece, South Korea, France, Germany, Brazil, Spain, Australia, Denmark, Sweden, and Italy. These empirical findings underscore that the spread of SARS-CoV-2 within Cyprus was markedly influenced by the influx of new, highly transmissible variants, triggering successive waves of infection. This investigation elucidates the emergence of new waves of infection subsequent to the advent of highly contagious and transmissible viral variants, notably characterized by an abundance of mutations localized within the spike protein. Notably, this discovery decisively contradicts the hitherto hypothesis of seasonal fluctuations in the virus’s epidemiological dynamics. This study emphasizes the importance of meticulously examining molecular genetics alongside virus migration patterns within a specific region. Past experiences also emphasize the substantial evolutionary potential of viruses such as SARS-CoV-2, underscoring the need for sustained vigilance. However, as the pandemic’s dynamics continue to evolve, a balanced approach between caution and resilience becomes paramount. This ethos encourages an approach founded on informed prudence and self-preservation, guided by public health authorities, rather than enduring apprehension. Such an approach empowers societies to adapt and progress, fostering a poised confidence rooted in well-founded adaptation. Full article
(This article belongs to the Special Issue Molecular Epidemiology of SARS-CoV-2: 2nd Edition)
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16 pages, 1040 KB  
Article
Thermal Image Processing for Respiratory Estimation from Cubical Data with Expandable Depth
by Maciej Szankin, Alicja Kwasniewska and Jacek Ruminski
J. Imaging 2023, 9(9), 184; https://doi.org/10.3390/jimaging9090184 - 13 Sep 2023
Cited by 3 | Viewed by 3258
Abstract
As healthcare costs continue to rise, finding affordable and non-invasive ways to monitor vital signs is increasingly important. One of the key metrics for assessing overall health and identifying potential issues early on is respiratory rate (RR). Most of the existing methods require [...] Read more.
As healthcare costs continue to rise, finding affordable and non-invasive ways to monitor vital signs is increasingly important. One of the key metrics for assessing overall health and identifying potential issues early on is respiratory rate (RR). Most of the existing methods require multiple steps that consist of image and signal processing. This might be difficult to deploy on edge devices that often do not have specialized digital signal processors (DSP). Therefore, the goal of this study is to develop a single neural network realizing the entire process of RR estimation in a single forward pass. The proposed solution builds on recent advances in video recognition, capturing both spatial and temporal information in a multi-path network. Both paths process the data at different sampling rates to capture rapid and slow changes that are associated with differences in the temperature of the nostril area during the breathing episodes. The preliminary results show that the introduced end-to-end solution achieves better performance compared to state-of-the-art methods, without requiring additional pre/post-processing steps and signal-processing techniques. In addition, the presented results demonstrate its robustness on low-resolution thermal video sequences that are often used at the embedded edge due to the size and power constraints of such systems. Taking that into account, the proposed approach has the potential for efficient and convenient respiratory rate estimation across various markets in solutions deployed locally, close to end users. Full article
(This article belongs to the Special Issue Data Processing with Artificial Intelligence in Thermal Imagery)
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20 pages, 7670 KB  
Article
A Novel Non-Contact Detection and Identification Method for the Post-Disaster Compression State of Injured Individuals Using UWB Bio-Radar
by Ding Shi, Fulai Liang, Jiahao Qiao, Yaru Wang, Yidan Zhu, Hao Lv, Xiao Yu, Teng Jiao, Fuyuan Liao, Keding Yan, Jianqi Wang and Yang Zhang
Bioengineering 2023, 10(8), 905; https://doi.org/10.3390/bioengineering10080905 - 30 Jul 2023
Cited by 7 | Viewed by 3058
Abstract
Building collapse leads to mechanical injury, which is the main cause of injury and death, with crush syndrome as its most common complication. During the post-disaster search and rescue phase, if rescue personnel hastily remove heavy objects covering the bodies of injured individuals [...] Read more.
Building collapse leads to mechanical injury, which is the main cause of injury and death, with crush syndrome as its most common complication. During the post-disaster search and rescue phase, if rescue personnel hastily remove heavy objects covering the bodies of injured individuals and fail to provide targeted medical care, ischemia-reperfusion injury may be triggered, leading to rhabdomyolysis. This may result in disseminated intravascular coagulation or acute respiratory distress syndrome, further leading to multiple organ failure, which ultimately leads to shock and death. Using bio-radar to detect vital signs and identify compression states can effectively reduce casualties during the search for missing persons behind obstacles. A time-domain ultra-wideband (UWB) bio-radar was applied for the non-contact detection of human vital sign signals behind obstacles. An echo denoising algorithm based on PSO-VMD and permutation entropy was proposed to suppress environmental noise, along with a wounded compression state recognition network based on radar-life signals. Based on training and testing using over 3000 data sets from 10 subjects in different compression states, the proposed multiscale convolutional network achieved a 92.63% identification accuracy. This outperformed SVM and 1D-CNN models by 5.30% and 6.12%, respectively, improving the casualty rescue success and post-disaster precision. Full article
(This article belongs to the Special Issue Contactless Technologies for Human Vital Signs Monitoring)
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18 pages, 4299 KB  
Article
SARS-CoV-2 Omicron Subvariants Balance Host Cell Membrane, Receptor, and Antibody Docking via an Overlapping Target Site
by Michael Overduin, Rakesh K. Bhat and Troy A. Kervin
Viruses 2023, 15(2), 447; https://doi.org/10.3390/v15020447 - 6 Feb 2023
Cited by 2 | Viewed by 3110
Abstract
Variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are emerging rapidly and offer surfaces that are optimized for recognition of host cell membranes while also evading antibodies arising from vaccinations and previous infections. Host cell infection is a multi-step process in which [...] Read more.
Variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are emerging rapidly and offer surfaces that are optimized for recognition of host cell membranes while also evading antibodies arising from vaccinations and previous infections. Host cell infection is a multi-step process in which spike heads engage lipid bilayers and one or more angiotensin-converting enzyme 2 (ACE-2) receptors. Here, the membrane binding surfaces of Omicron subvariants are compared using cryo-electron microscopy (cEM) structures of spike trimers from BA.2, BA.2.12.1, BA.2.13, BA.2.75, BA.3, BA.4, and BA.5 viruses. Despite significant differences around mutated sites, they all maintain strong membrane binding propensities that first appeared in BA.1. Both their closed and open states retain elevated membrane docking capacities, although the presence of more closed than open states diminishes opportunities to bind receptors while enhancing membrane engagement. The electrostatic dipoles are generally conserved. However, the BA.2.75 spike dipole is compromised, and its ACE-2 affinity is increased, and BA.3 exhibits the opposite pattern. We propose that balancing the functional imperatives of a stable, readily cleavable spike that engages both lipid bilayers and receptors while avoiding host defenses underlies betacoronavirus evolution. This provides predictive criteria for rationalizing future pandemic waves and COVID-19 transmissibility while illuminating critical sites and strategies for simultaneously combating multiple variants. Full article
(This article belongs to the Collection SARS-CoV-2 and COVID-19)
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