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26 pages, 4766 KiB  
Review
Applications of Advanced Imaging for Radiotherapy Planning and Response Assessment in the Central Nervous System
by Liam S. P. Lawrence, Rachel W. Chan, Amit Singnurkar, Jay Detsky, Chris Heyn, Pejman J. Maralani, Hany Soliman, Greg J. Stanisz, Arjun Sahgal and Angus Z. Lau
Tomography 2025, 11(6), 68; https://doi.org/10.3390/tomography11060068 - 12 Jun 2025
Viewed by 1153
Abstract
Background/Objectives: Radiotherapy for tumors of the central nervous system (CNS) could be improved by incorporating advanced imaging techniques into treatment planning and response assessment. The objective of this narrative review is to highlight the recent developments in magnetic resonance imaging (MRI) and positron [...] Read more.
Background/Objectives: Radiotherapy for tumors of the central nervous system (CNS) could be improved by incorporating advanced imaging techniques into treatment planning and response assessment. The objective of this narrative review is to highlight the recent developments in magnetic resonance imaging (MRI) and positron emission tomography (PET) for applications in CNS radiotherapy. Methods: Recent articles were selected for discussion, covering the following topics: advanced imaging on MRI-linear accelerators for early response assessment in glioma; PET for guiding treatment planning and response assessment in glioma; and contrast-enhanced imaging and metabolic imaging for differentiating tumor progression and radiation necrosis for brain metastasis treatment. Where necessary, searches of scholarly databases (e.g., Google Scholar, PubMed) were used to find papers for each topic. The topics were chosen based on the perception of promise in advancing specific applications of CNS radiotherapy and not covered in detail elsewhere. This review is not intended to be comprehensive. Results: Advanced MRI sequences and PET could have a substantial impact on CNS radiotherapy. For gliomas, the tumor response to therapy could be assessed much earlier than using the conventional technique of measuring changes in tumor size. Using advanced imaging on combined imaging/therapy devices like MR-Linacs would enable response monitoring throughout radiotherapy. For brain metastases, radiation necrosis and tumor progression might be reliably differentiated with imaging techniques sensitive to perfusion or metabolism. However, the lack of level 1 evidence supporting specific uses for each imaging technique is an impediment to widespread use. Conclusions: Advanced MRI and PET have great promise to change the standard of care for CNS radiotherapy, but clinical trials validating specific applications are needed. Full article
(This article belongs to the Special Issue Progress in the Use of Advanced Imaging for Radiation Oncology)
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23 pages, 4826 KiB  
Article
Visualization of High-Intensity Laser–Matter Interactions in Virtual Reality and Web Browser
by Martin Matys, James P. Thistlewood, Mariana Kecová, Petr Valenta, Martina Greplová Žáková, Martin Jirka, Prokopis Hadjisolomou, Alžběta Špádová, Marcel Lamač and Sergei V. Bulanov
Photonics 2025, 12(5), 436; https://doi.org/10.3390/photonics12050436 - 30 Apr 2025
Viewed by 1106
Abstract
We present the Virtual Beamline (VBL) application, an interactive web-based platform for visualizing high-intensity laser–matter interactions using particle-in-cell (PIC) simulations, with future potential for experimental data visualization. These interactions include ion acceleration, electron acceleration, γ-flash generation, electron–positron pair production, and attosecond and [...] Read more.
We present the Virtual Beamline (VBL) application, an interactive web-based platform for visualizing high-intensity laser–matter interactions using particle-in-cell (PIC) simulations, with future potential for experimental data visualization. These interactions include ion acceleration, electron acceleration, γ-flash generation, electron–positron pair production, and attosecond and spiral pulse generation. Developed at the ELI Beamlines facility, VBL integrates a custom-built WebGL engine with WebXR-based Virtual Reality (VR) support, allowing users to explore complex plasma dynamics in non-VR mode on a computer screen or in fully immersive VR mode using a head-mounted display. The application runs directly in a standard web browser, ensuring broad accessibility. VBL enhances the visualization of PIC simulations by efficiently processing and rendering four main data types: point particles, 1D lines, 2D textures, and 3D volumes. By utilizing interactive 3D visualization, it overcomes the limitations of traditional 2D representations, offering enhanced spatial understanding and real-time manipulation of visualization parameters such as time steps, data layers, and colormaps. Users can interactively explore the visualized data by moving their body or using a controller for navigation, zooming, and rotation. These interactive capabilities improve data exploration and interpretation, making VBL a valuable tool for both scientific analysis and educational outreach. The visualizations are hosted online and freely accessible on our server, providing researchers, the general public, and broader audiences with an interactive tool to explore complex plasma physics simulations. By offering an intuitive and dynamic approach to large-scale datasets, VBL enhances both scientific research and knowledge dissemination in high-intensity laser–matter physics. Full article
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18 pages, 9250 KiB  
Article
Defect-Engineered Z-Scheme Heterojunction of Fe-MOFs/Bi2WO6 for Solar-Driven CO2 Conversion: Synergistic Surface Catalysis and Interfacial Charge Dynamics
by Ting Liu, Yun Wu, Hao Wang, Jichang Lu and Yongming Luo
Nanomaterials 2025, 15(8), 618; https://doi.org/10.3390/nano15080618 - 17 Apr 2025
Viewed by 629
Abstract
The urgent need for sustainable CO2 conversion technologies has driven the development of advanced photocatalysts that harness solar energy. This study employs a CTAB-assisted solvothermal method to fabricate a Z-scheme heterojunction Fe-MOFs/VO-Bi2WO6 (FM/VO-BWO) for photocatalytic [...] Read more.
The urgent need for sustainable CO2 conversion technologies has driven the development of advanced photocatalysts that harness solar energy. This study employs a CTAB-assisted solvothermal method to fabricate a Z-scheme heterojunction Fe-MOFs/VO-Bi2WO6 (FM/VO-BWO) for photocatalytic CO2 reduction. Positron annihilation lifetime spectroscopy (PALS) was employed to confirm the existence of oxygen vacancies, while spherical aberration-corrected transmission electron microscope (STEM) characterization verified the successful construction of heterointerfaces. X-ray absorption fine structure (XAFS) spectra confirmed that the defect configuration and heterostructure changed the surface chemical valence state. The optimized 1.0FM/VO-BWO composite demonstrated exceptional photocatalytic performance, achieving CO and CH4 yields of 60.48 and 4.3 μmol/g, respectively, under visible-light 11.8- and 1.5-fold enhancements over pristine Bi2WO6. The enhanced performance is attributed to oxygen vacancy-induced active sites facilitating CO₂ adsorption/activation. In situ molecular spectroscopy confirmed the formation of critical CO2-derived intermediates (COOH* and CHO*) through surface interactions involving four-coordinated and two-coordinated hydrogen-bonded water molecules. Furthermore, the accelerated interfacial charge transfer efficiency mediated by the Z-scheme heterojunction has been conclusively demonstrated. This work establishes a paradigm for defect-mediated heterojunction design, offering a sustainable route for solar fuel production. Full article
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20 pages, 2264 KiB  
Review
Nanomaterial-Based Molecular Imaging in Cancer: Advances in Simulation and AI Integration
by James C. L. Chow
Biomolecules 2025, 15(3), 444; https://doi.org/10.3390/biom15030444 - 20 Mar 2025
Cited by 10 | Viewed by 1387
Abstract
Nanomaterials represent an innovation in cancer imaging by offering enhanced contrast, improved targeting capabilities, and multifunctional imaging modalities. Recent advancements in material engineering have enabled the development of nanoparticles tailored for various imaging techniques, including magnetic resonance imaging (MRI), computed tomography (CT), positron [...] Read more.
Nanomaterials represent an innovation in cancer imaging by offering enhanced contrast, improved targeting capabilities, and multifunctional imaging modalities. Recent advancements in material engineering have enabled the development of nanoparticles tailored for various imaging techniques, including magnetic resonance imaging (MRI), computed tomography (CT), positron emission tomography (PET), and ultrasound (US). These nanoscale agents improve sensitivity and specificity, enabling early cancer detection and precise tumor characterization. Monte Carlo (MC) simulations play a pivotal role in optimizing nanomaterial-based imaging by modeling their interactions with biological tissues, predicting contrast enhancement, and refining dosimetry for radiation-based imaging techniques. These computational methods provide valuable insights into nanoparticle behavior, aiding in the design of more effective imaging agents. Moreover, artificial intelligence (AI) and machine learning (ML) approaches are transforming cancer imaging by enhancing image reconstruction, automating segmentation, and improving diagnostic accuracy. AI-driven models can also optimize MC-based simulations by accelerating data analysis and refining nanoparticle design through predictive modeling. This review explores the latest advancements in nanomaterial-based cancer imaging, highlighting the synergy between nanotechnology, MC simulations, and AI-driven innovations. By integrating these interdisciplinary approaches, future cancer imaging technologies can achieve unprecedented precision, paving the way for more effective diagnostics and personalized treatment strategies. Full article
(This article belongs to the Collection Feature Papers in Section 'Molecular Medicine')
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10 pages, 428 KiB  
Article
Deciphering the Electron Spectral Hardening in AMS-02
by Carmelo Evoli
Astronomy 2025, 4(1), 4; https://doi.org/10.3390/astronomy4010004 - 28 Feb 2025
Viewed by 814
Abstract
We analyze the electron cosmic-ray spectrum from AMS-02, focusing on the spectral hardening around 42 GeV. Our findings confirm that this feature is intrinsic to the primary electron component rather than a byproduct of contamination from primary positron sources. Even under conservative assumptions, [...] Read more.
We analyze the electron cosmic-ray spectrum from AMS-02, focusing on the spectral hardening around 42 GeV. Our findings confirm that this feature is intrinsic to the primary electron component rather than a byproduct of contamination from primary positron sources. Even under conservative assumptions, its significance remains at about 7σ, strongly indicating a genuine spectral break. Accordingly, we introduce a new, more realistic parametric fit, which we recommend for the next round of AMS-02 analyses. Once the sources of systematic uncertainties are better constrained, this refined approach can either reinforce or refute our conclusions, providing a clearer understanding of the observed electron spectrum. If confirmed, we propose that this hardening most likely arises from interstellar transport or acceleration effects. Full article
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18 pages, 3633 KiB  
Article
Radiomics-Based Prediction of Treatment Response to TRuC-T Cell Therapy in Patients with Mesothelioma: A Pilot Study
by Hubert Beaumont, Antoine Iannessi, Alexandre Thinnes, Sebastien Jacques and Alfonso Quintás-Cardama
Cancers 2025, 17(3), 463; https://doi.org/10.3390/cancers17030463 - 29 Jan 2025
Viewed by 1128
Abstract
Background/Objectives: T cell receptor fusion constructs (TRuCs), a next generation engineered T cell therapy, hold great promise. To accelerate the clinical development of these therapies, improving patient selection is a crucial pathway forward. Methods: We retrospectively analyzed 23 mesothelioma patients (85 target tumors) [...] Read more.
Background/Objectives: T cell receptor fusion constructs (TRuCs), a next generation engineered T cell therapy, hold great promise. To accelerate the clinical development of these therapies, improving patient selection is a crucial pathway forward. Methods: We retrospectively analyzed 23 mesothelioma patients (85 target tumors) treated in a phase 1/2 single arm clinical trial (NCT03907852). Five imaging sites were involved, the settings for the evaluations were Blinded Independent Central Reviews (BICRs) with double reads. The reproducibility of 3416 radiomics and delta-radiomics (Δradiomics) was assessed. The univariate analysis evaluated correlations at the target tumor level with (1) tumor diameter response; (2) tumor volume response, according to the Quantitative Imaging Biomarker Alliance; and (3) the mean standard uptake value (SUV) response, as defined by the positron emission tomography response criteria in solid tumors (PERCISTs). A random forest model predicted the response of the target pleural tumors. Results: Tumor anatomical distribution was 55.3%, 17.6%, 14.1%, and 10.6% in the pleura, lymph nodes, peritoneum, and soft tissues, respectively. Radiomics/Δradiomics reproducibility differed across tumor localizations. Radiomics were more reproducible than Δradiomics. In the univariate analysis, none of the radiomics/Δradiomics correlated with any response criteria. With an accuracy ranging from 0.75 to 0.9, three radiomics/Δradiomics were able to predict the response of target pleural tumors. Pivotal studies will require a sample size of 250 to 400 tumors. Conclusions: The prediction of responding target pleural tumors can be achieved using a machine learning-based radiomics/Δradiomics analysis. Tumor-specific reproducibility and the average values indicated that using tumor models to create an effective patient model would require combining several target tumor models. Full article
(This article belongs to the Special Issue Biomarkers and Targeted Therapy in Malignant Pleural Mesothelioma)
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35 pages, 2304 KiB  
Review
Modernizing Neuro-Oncology: The Impact of Imaging, Liquid Biopsies, and AI on Diagnosis and Treatment
by John Rafanan, Nabih Ghani, Sarah Kazemeini, Ahmed Nadeem-Tariq, Ryan Shih and Thomas A. Vida
Int. J. Mol. Sci. 2025, 26(3), 917; https://doi.org/10.3390/ijms26030917 - 22 Jan 2025
Cited by 6 | Viewed by 3320
Abstract
Advances in neuro-oncology have transformed the diagnosis and management of brain tumors, which are among the most challenging malignancies due to their high mortality rates and complex neurological effects. Despite advancements in surgery and chemoradiotherapy, the prognosis for glioblastoma multiforme (GBM) and brain [...] Read more.
Advances in neuro-oncology have transformed the diagnosis and management of brain tumors, which are among the most challenging malignancies due to their high mortality rates and complex neurological effects. Despite advancements in surgery and chemoradiotherapy, the prognosis for glioblastoma multiforme (GBM) and brain metastases remains poor, underscoring the need for innovative diagnostic strategies. This review highlights recent advancements in imaging techniques, liquid biopsies, and artificial intelligence (AI) applications addressing current diagnostic challenges. Advanced imaging techniques, including diffusion tensor imaging (DTI) and magnetic resonance spectroscopy (MRS), improve the differentiation of tumor progression from treatment-related changes. Additionally, novel positron emission tomography (PET) radiotracers, such as 18F-fluoropivalate, 18F-fluoroethyltyrosine, and 18F-fluluciclovine, facilitate metabolic profiling of high-grade gliomas. Liquid biopsy, a minimally invasive technique, enables real-time monitoring of biomarkers such as circulating tumor DNA (ctDNA), extracellular vesicles (EVs), circulating tumor cells (CTCs), and tumor-educated platelets (TEPs), enhancing diagnostic precision. AI-driven algorithms, such as convolutional neural networks, integrate diagnostic tools to improve accuracy, reduce interobserver variability, and accelerate clinical decision-making. These innovations advance personalized neuro-oncological care, offering new opportunities to improve outcomes for patients with central nervous system tumors. We advocate for future research integrating these tools into clinical workflows, addressing accessibility challenges, and standardizing methodologies to ensure broad applicability in neuro-oncology. Full article
(This article belongs to the Section Molecular Oncology)
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17 pages, 5761 KiB  
Article
Computed Tomography-Image-Based Glioma Grading Using Radiomics and Machine Learning: A Proof-of-Principle Study
by Melike Bilgin, Sabriye Sennur Bilgin, Burak Han Akkurt, Walter Heindel, Manoj Mannil and Manfred Musigmann
Cancers 2025, 17(2), 322; https://doi.org/10.3390/cancers17020322 - 20 Jan 2025
Viewed by 1216
Abstract
Background/Objectives: In recent years, numerous studies have been published on determining the WHO grade of central nervous system (CNS) tumors using machine learning algorithms. These studies are usually based on magnetic resonance imaging (MRI) and sometimes also on positron emission tomography (PET) images. [...] Read more.
Background/Objectives: In recent years, numerous studies have been published on determining the WHO grade of central nervous system (CNS) tumors using machine learning algorithms. These studies are usually based on magnetic resonance imaging (MRI) and sometimes also on positron emission tomography (PET) images. To date, however, there are virtually no corresponding studies based on routinely generated computed tomography (CT) images. The aim of our proof-of-concept study is to investigate whether machine learning-based tumor diagnosis is also possible using CT images. Methods: We investigate the differentiability of histologically confirmed low-grade and high-grade gliomas. Three conventional machine learning algorithms and a neural net are tested. In addition, we analyze which of the common imaging methods (MRI or CT) appears to be best suited for the diagnostic question under investigation when machine learning algorithms are used. For this purpose, we compare our results based on CT images with numerous studies based on MRI scans. Results: Our best-performing model includes six features and is obtained using univariate analysis for feature preselection and a Naive Bayes approach for model construction. Using independent test data, this model yields a mean AUC of 0.903, a mean accuracy of 0.839, a mean sensitivity of 0.807 and a mean specificity of 0.864. Conclusions: Our results demonstrate that low-grade and high-grade gliomas can be differentiated with high accuracy using machine learning algorithms, not only based on the usual MRI scans, but also based on CT images. In the future, such CT-image-based models can help to further accelerate brain tumor diagnostics and to reduce the number of necessary biopsies. Full article
(This article belongs to the Special Issue Application of Advanced Biomedical Imaging in Cancer Treatment)
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17 pages, 2194 KiB  
Article
A Multidimensional Framework Incorporating 2D U-Net and 3D Attention U-Net for the Segmentation of Organs from 3D Fluorodeoxyglucose-Positron Emission Tomography Images
by Andreas Vezakis, Ioannis Vezakis, Theodoros P. Vagenas, Ioannis Kakkos and George K. Matsopoulos
Electronics 2024, 13(17), 3526; https://doi.org/10.3390/electronics13173526 - 5 Sep 2024
Cited by 1 | Viewed by 1200
Abstract
Accurate analysis of Fluorodeoxyglucose (FDG)-Positron Emission Tomography (PET) images is crucial for the diagnosis, treatment assessment, and monitoring of patients suffering from various cancer types. FDG-PET images provide valuable insights by revealing regions where FDG, a glucose analog, accumulates within the body. While [...] Read more.
Accurate analysis of Fluorodeoxyglucose (FDG)-Positron Emission Tomography (PET) images is crucial for the diagnosis, treatment assessment, and monitoring of patients suffering from various cancer types. FDG-PET images provide valuable insights by revealing regions where FDG, a glucose analog, accumulates within the body. While regions of high FDG uptake include suspicious tumor lesions, FDG also accumulates in non-tumor-specific regions and organs. Identifying these regions is crucial for excluding them from certain measurements, or calculating useful parameters, for example, the mean standardized uptake value (SUV) to assess the metabolic activity of the liver. Manual organ delineation from FDG-PET by clinicians demands significant effort and time, which is often not feasible in real clinical workflows with high patient loads. For this reason, this study focuses on automatically identifying key organs with high FDG uptake, namely the brain, left cardiac ventricle, kidneys, liver, and bladder. To this end, an ensemble approach is adopted, where a three-dimensional Attention U-Net (3D AU-Net) is employed for robust three-dimensional analysis, while a two-dimensional U-Net (2D U-Net) is utilized for analysis in the coronal plane. The 3D AU-Net demonstrates highly detailed organ segmentations, but also includes many false positive regions. In contrast, 2D U-Net achieves higher reliability with minimal false positive regions, but lacks the 3D details. Experiments conducted on a subset of the public AutoPET dataset with 60 PET scans demonstrate that the proposed ensemble model achieves high accuracy in segmenting the required organs, surpassing current state-of-the-art techniques, and supporting the potential utilization of the proposed methodology in accelerating and enhancing the clinical workflow of cancer patients. Full article
(This article belongs to the Special Issue Artificial Intelligence in Image Processing and Computer Vision)
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11 pages, 5168 KiB  
Review
X17: Status and Perspectives
by Carlo Gustavino
Universe 2024, 10(7), 285; https://doi.org/10.3390/universe10070285 - 29 Jun 2024
Cited by 6 | Viewed by 1336
Abstract
Recently, a group directed by A. J. Krasznahorkay observed an anomaly in the emission of electron–positron pairs in three different nuclear reactions, namely, the  3H(p,e e +) 4He,  7Li(p,e e [...] Read more.
Recently, a group directed by A. J. Krasznahorkay observed an anomaly in the emission of electron–positron pairs in three different nuclear reactions, namely, the  3H(p,e e +) 4He,  7Li(p,e e +) 8Be, and  11B(p,e e +) 12C processes. Kinematics indicate that this anomaly might be due to the de-excitation of  4He,  8Be, and  12C nuclei with the emission of a boson with a mass of about 17 MeV, rapidly decaying into e e + pairs. The result of the experiments performed with the singletron accelerator of ATOMKI is reviewed, and the consequences of the so-called X17 boson in particle physics and in cosmology are discussed. Forthcoming experiments designed to shed light on the possible existence of the X17 boson are also reported. Full article
(This article belongs to the Special Issue Recent Outcomes and Future Challenges in Nuclear Astrophysics)
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17 pages, 2957 KiB  
Article
The Influence of Rhenium Content on Helium Desorption Behavior in Tungsten–Rhenium Alloy
by Yongli Liu, Yamin Song, Ye Dong, Te Zhu, Peng Zhang, Lu Wu, Xingzhong Cao and Baoyi Wang
Materials 2024, 17(11), 2732; https://doi.org/10.3390/ma17112732 - 4 Jun 2024
Viewed by 1276
Abstract
To investigate the influence of different rhenium contents on the helium desorption behavior in tungsten–rhenium alloys, pure tungsten and tungsten–rhenium alloys were irradiated with helium under the same conditions. All irradiated samples were characterized using TDS and DBS techniques. The results indicate that [...] Read more.
To investigate the influence of different rhenium contents on the helium desorption behavior in tungsten–rhenium alloys, pure tungsten and tungsten–rhenium alloys were irradiated with helium under the same conditions. All irradiated samples were characterized using TDS and DBS techniques. The results indicate that the addition of rhenium can reduce the total helium desorption quantity in tungsten–rhenium alloys and slightly accelerate the reduction in the concentration of vacancy-type defects accompanying helium dissociation. The desorption activation energy of helium is approximately 2 eV at the low-temperature peak (~785 K) and about 4 eV at the high-temperature peak (~1475 K). An increase in rhenium content causes the desorption peak to shift towards higher temperatures (>1473 K), which is attributed to the formation of the stable complex structures between rhenium and vacancies. Besides, the migration of He-vacancy complexes towards traps and dynamic annealing processes both lead to the recovery of vacancy-type defects, resulting in a decrease in the positron annihilation S parameters. Full article
(This article belongs to the Special Issue Key Materials in Nuclear Reactors)
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18 pages, 3207 KiB  
Article
Early Blood–Brain Barrier Impairment as a Pathological Hallmark in a Novel Model of Closed-Head Concussive Brain Injury (CBI) in Mice
by Stefan J. Blaschke, Nora Rautenberg, Heike Endepols, Aileen Jendro, Jens Konrad, Susan Vlachakis, Dirk Wiedermann, Michael Schroeter, Bernd Hoffmann, Rudolf Merkel, Niklas Marklund, Gereon R. Fink and Maria A. Rueger
Int. J. Mol. Sci. 2024, 25(9), 4837; https://doi.org/10.3390/ijms25094837 - 29 Apr 2024
Viewed by 1885
Abstract
Concussion, caused by a rotational acceleration/deceleration injury mild enough to avoid structural brain damage, is insufficiently captured in recent preclinical models, hampering the relation of pathophysiological findings on the cellular level to functional and behavioral deficits. We here describe a novel model of [...] Read more.
Concussion, caused by a rotational acceleration/deceleration injury mild enough to avoid structural brain damage, is insufficiently captured in recent preclinical models, hampering the relation of pathophysiological findings on the cellular level to functional and behavioral deficits. We here describe a novel model of unrestrained, single vs. repetitive concussive brain injury (CBI) in male C56Bl/6j mice. Longitudinal behavioral assessments were conducted for up to seven days afterward, alongside the evaluation of structural cerebral integrity by in vivo magnetic resonance imaging (MRI, 9.4 T), and validated ex vivo by histology. Blood–brain barrier (BBB) integrity was analyzed by means of fluorescent dextran- as well as immunoglobulin G (IgG) extravasation, and neuroinflammatory processes were characterized both in vivo by positron emission tomography (PET) using [18F]DPA-714 and ex vivo using immunohistochemistry. While a single CBI resulted in a defined, subacute neuropsychiatric phenotype, longitudinal cognitive testing revealed a marked decrease in spatial cognition, most pronounced in mice subjected to CBI at high frequency (every 48 h). Functional deficits were correlated to a parallel disruption of the BBB, (R2 = 0.29, p < 0.01), even detectable by a significant increase in hippocampal uptake of [18F]DPA-714, which was not due to activation of microglia, as confirmed immunohistochemically. Featuring a mild but widespread disruption of the BBB without evidence of macroscopic damage, this model induces a characteristic neuro-psychiatric phenotype that correlates to the degree of BBB disruption. Based on these findings, the BBB may function as both a biomarker of CBI severity and as a potential treatment target to improve recovery from concussion. Full article
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11 pages, 2625 KiB  
Article
Correlation of Presynaptic and Postsynaptic Proteins with Pathology in Alzheimer’s Disease
by Geidy E. Serrano, Jessica Walker, Courtney Nelson, Michael Glass, Richard Arce, Anthony Intorcia, Madison P. Cline, Natalie Nabaty, Amanda Acuña, Ashton Huppert Steed, Lucia I. Sue, Christine Belden, Parichita Choudhury, Eric Reiman, Alireza Atri and Thomas G. Beach
Int. J. Mol. Sci. 2024, 25(6), 3130; https://doi.org/10.3390/ijms25063130 - 8 Mar 2024
Cited by 5 | Viewed by 2327
Abstract
Synaptic transmission is essential for nervous system function and the loss of synapses is a known major contributor to dementia. Alzheimer’s disease dementia (ADD) is characterized by synaptic loss in the mesial temporal lobe and cerebral neocortex, both of which are brain areas [...] Read more.
Synaptic transmission is essential for nervous system function and the loss of synapses is a known major contributor to dementia. Alzheimer’s disease dementia (ADD) is characterized by synaptic loss in the mesial temporal lobe and cerebral neocortex, both of which are brain areas associated with memory and cognition. The association of synaptic loss and ADD was established in the late 1980s, and it has been estimated that 30–50% of neocortical synaptic protein is lost in ADD, but there has not yet been a quantitative profiling of different synaptic proteins in different brain regions in ADD from the same individuals. Very recently, positron emission tomography (PET) imaging of synapses is being developed, accelerating the focus on the role of synaptic loss in ADD and other conditions. In this study, we quantified the densities of two synaptic proteins, the presynaptic protein Synaptosome Associated Protein 25 (SNAP25) and the postsynaptic protein postsynaptic density protein 95 (PSD95) in the human brain, using enzyme-linked immunosorbent assays (ELISA). Protein was extracted from the cingulate gyrus, hippocampus, frontal, primary visual, and entorhinal cortex from cognitively unimpaired controls, subjects with mild cognitive impairment (MCI), and subjects with dementia that have different levels of Alzheimer’s pathology. SNAP25 is significantly reduced in ADD when compared to controls in the frontal cortex, visual cortex, and cingulate, while the hippocampus showed a smaller, non-significant reduction, and entorhinal cortex concentrations were not different. In contrast, all brain areas showed lower PSD95 concentrations in ADD when compared to controls without dementia, although in the hippocampus, this failed to reach significance. Interestingly, cognitively unimpaired cases with high levels of AD pathology had higher levels of both synaptic proteins in all brain regions. SNAP25 and PSD95 concentrations significantly correlated with densities of neurofibrillary tangles, amyloid plaques, and Mini Mental State Examination (MMSE) scores. Our results suggest that synaptic transmission is affected by ADD in multiple brain regions. The differences were less marked in the entorhinal cortex and the hippocampus, most likely due to a ceiling effect imposed by the very early development of neurofibrillary tangles in older people in these brain regions. Full article
(This article belongs to the Special Issue Molecular Mechanisms of Brain Wiring)
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14 pages, 869 KiB  
Review
Integrating Artificial Intelligence and PET Imaging for Drug Discovery: A Paradigm Shift in Immunotherapy
by Jeremy P. McGale, Harrison J. Howell, Arnaud Beddok, Mickael Tordjman, Roger Sun, Delphine Chen, Anna M. Wu, Tarek Assi, Samy Ammari and Laurent Dercle
Pharmaceuticals 2024, 17(2), 210; https://doi.org/10.3390/ph17020210 - 6 Feb 2024
Cited by 8 | Viewed by 4473
Abstract
The integration of artificial intelligence (AI) and positron emission tomography (PET) imaging has the potential to become a powerful tool in drug discovery. This review aims to provide an overview of the current state of research and highlight the potential for this alliance [...] Read more.
The integration of artificial intelligence (AI) and positron emission tomography (PET) imaging has the potential to become a powerful tool in drug discovery. This review aims to provide an overview of the current state of research and highlight the potential for this alliance to advance pharmaceutical innovation by accelerating the development and deployment of novel therapeutics. We previously performed a scoping review of three databases (Embase, MEDLINE, and CENTRAL), identifying 87 studies published between 2018 and 2022 relevant to medical imaging (e.g., CT, PET, MRI), immunotherapy, artificial intelligence, and radiomics. Herein, we reexamine the previously identified studies, performing a subgroup analysis on articles specifically utilizing AI and PET imaging for drug discovery purposes in immunotherapy-treated oncology patients. Of the 87 original studies identified, 15 met our updated search criteria. In these studies, radiomics features were primarily extracted from PET/CT images in combination (n = 9, 60.0%) rather than PET imaging alone (n = 6, 40.0%), and patient cohorts were mostly recruited retrospectively and from single institutions (n = 10, 66.7%). AI models were used primarily for prognostication (n = 6, 40.0%) or for assisting in tumor phenotyping (n = 4, 26.7%). About half of the studies stress-tested their models using validation sets (n = 4, 26.7%) or both validation sets and test sets (n = 4, 26.7%), while the remaining six studies (40.0%) either performed no validation at all or used less stringent methods such as cross-validation on the training set. Overall, the integration of AI and PET imaging represents a paradigm shift in drug discovery, offering new avenues for more efficient development of therapeutics. By leveraging AI algorithms and PET imaging analysis, researchers could gain deeper insights into disease mechanisms, identify new drug targets, or optimize treatment regimens. However, further research is needed to validate these findings and address challenges such as data standardization and algorithm robustness. Full article
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12 pages, 573 KiB  
Perspective
Artificial Intelligence’s Transformative Role in Illuminating Brain Function in Long COVID Patients Using PET/FDG
by Thorsten Rudroff
Brain Sci. 2024, 14(1), 73; https://doi.org/10.3390/brainsci14010073 - 10 Jan 2024
Cited by 3 | Viewed by 2240
Abstract
Cutting-edge brain imaging techniques, particularly positron emission tomography with Fluorodeoxyglucose (PET/FDG), are being used in conjunction with Artificial Intelligence (AI) to shed light on the neurological symptoms associated with Long COVID. AI, particularly deep learning algorithms such as convolutional neural networks (CNN) and [...] Read more.
Cutting-edge brain imaging techniques, particularly positron emission tomography with Fluorodeoxyglucose (PET/FDG), are being used in conjunction with Artificial Intelligence (AI) to shed light on the neurological symptoms associated with Long COVID. AI, particularly deep learning algorithms such as convolutional neural networks (CNN) and generative adversarial networks (GAN), plays a transformative role in analyzing PET scans, identifying subtle metabolic changes, and offering a more comprehensive understanding of Long COVID’s impact on the brain. It aids in early detection of abnormal brain metabolism patterns, enabling personalized treatment plans. Moreover, AI assists in predicting the progression of neurological symptoms, refining patient care, and accelerating Long COVID research. It can uncover new insights, identify biomarkers, and streamline drug discovery. Additionally, the application of AI extends to non-invasive brain stimulation techniques, such as transcranial direct current stimulation (tDCS), which have shown promise in alleviating Long COVID symptoms. AI can optimize treatment protocols by analyzing neuroimaging data, predicting individual responses, and automating adjustments in real time. While the potential benefits are vast, ethical considerations and data privacy must be rigorously addressed. The synergy of AI and PET scans in Long COVID research offers hope in understanding and mitigating the complexities of this condition. Full article
(This article belongs to the Special Issue Advances of AI in Neuroimaging)
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