Search Results (15)

The Volga is the largest river in Europe and its headwaters comprise reference or least disturbed conditions. In the headwaters of the Volga (445 km) upstream of Tver, 27 diatom samples (18 from the Volga and nine from selected tributaries) were collected in shallow water along the banks from different habitats, wherefrom 270 taxa (244 pennate and 26 centric) were identified. Most benthic taxa were found within Naviculaceae (40 taxa), Fragilariaceae (29 taxa), Bacillariaceae (27 taxa), Achnanthaceae (23 taxa), Gomphonemataceae (19 taxa), Cymbellaceae (17 taxa), and 16 taxa belong to the Amphora-complex. Species richness in the Volga and its tributaries was comparable; the mean value was 46 in the Volga and 50 in the tributaries. Regarding the saprobic index, the source region (reach R1) was characterized by a large proportion of xeno- and oligo-saprobic species, with the proportion of oligo-beta and beta-meso-saprobic species increasing along the continuum. This study provides a first comprehensive checklist of benthic diatoms for the Volga headwaters and analyzes longitudinal changes as well as the interplay between abiotic parameters and the diatom community in the headwaters of the Volga. Full article

Different communities of primary producers were surveyed in a series of five river reservoirs on the Sava River in southeast Slovenia. Seasonal differences of phytoplanktonic and phytobenthic communities were studied in the reservoirs of hydroelectric power plants. Macrophytes were surveyed in the summer, while phytoplankton and periphyton were sampled in the winter and summer of 2021. The taxonomic composition of diatoms was studied in greater detail and additionally analysed. The results showed that the species composition of phytoplankton and phytobenthos differed between seasons. The communities were also more similar between the seasons at the same sampling site than between the sampling sites. Temperature was the parameter that had the greatest impact on the taxonomic composition of phytoplanktonic and phytobenthic communities. In total, 51 algal taxa and 81 species of diatoms were recorded, respectively. Furthermore, 15 species of aquatic macrophytes were found. The abundance of phytoplankton was the highest in the lowest reservoir in the series, in Brežice, where the temperature was also the highest. The number of macrophytes also increased downstream, but their abundances were low, mainly due to coarse substrate on the banks consisting of rocks and boulders. Constructing additional reservoirs on this section of the Sava River could increase the probability of the substantial growth of phytoplankton and cyanobacteria within it. On the other hand, providing patches of finer substrates (gravel, pebbles) would support the abundance of macrophyte species, which could control the concentrations of nutrients in the summer and prevent the blooms more efficiently. Full article

Throughout the world, river basins are directly or indirectly affected by human activities, reducing local and global biodiversity and preventing the ecosystem from properly functioning. Our research focused on the Irpin River basin (Ukraine), whose water bodies have experienced various impacts due to human activities, including the unexpected extremes caused by military operations in the catchment area: long-term flooding, disturbance of free flow, significant water level fluctuations, etc. The study hypothesized that the primary factors determining the structural and spatial distribution of quantitative indicators of microalgae and aquatic macrophytes are the result of various hydromorphological changes, that lead to changes in the physical and chemical parameters of the aquatic environment. Very high values of chlorophyll a in the water column (59–106 µg · L⁻¹), an increase in the abundance (number of cells) and biomass of algae (due to the predominance of certain groups in the transformed sections), as well as saprobic index were recorded in the sections of the Irpin River basin that underwent significant hydromorphological changes. Our results revealed a strong correlation between phytoplanktonic (in the water column) chlorophyll a levels and water temperature (r = 0.76, p < 0.001), as well as organic phosphorus and polyphosphate concentrations (r = 0.61, p < 0.01). ANOVA and Monte Carlo permutation tests in a Canonical Correspondence Analysis (CCA) showed that the abundance of different divisions of phytoplankton and phytobenthos were significantly and similarly related to several environmental variables. We observed a positive correlation between the number of cyanobacteria and the concentration of ammonium nitrogen, nitrites, and phosphorus compounds. An increase in dissolved organic matter in the water can explain the increase in the biomass of Dinoflagellata and Euglenophyta. Species richness and the cover values of the macrophytes also clearly reflected changes in vegetation activity in sections of the Irpin River caused by hydromorphological changes. The results indicated that long-term flooding had the most negative impact on macrophyte communities. At some sites, the impact was so severe that the number of macrophyte species was very low. The total number of macrophyte species showed a significant negative correlation with total suspended solids (r = −0.51, p < 0.05) and phytoplankton chlorophyll a concentration (r = −0.73, p < 0.001). Our results provide a scientific basis for predicting changes in riverine microalgal and aquatic macrophyte communities due to extreme hydrological events. Full article

Genomic and chemical analysis has revealed that numerous species of filamentous cyanobacteria harbor complex secondary metabolisms tailored to their particular ecological niche. The metabolomic analysis of strains and environmental samples from benthic cyanobacterial mats (BCMs) from coral reefs has the potential to expand the library of marine cyanobacteria-derived natural products. In this study, cyanobacterial strains were obtained from phytobenthos collected from coral reefs in Abrolhos, Brazil and Ishigaki, Japan. Phylogenetic analysis of isolates shows high similarity to previously described members of benthic mats and also suggests the geographic expansion of the Adonisia lineage. Chemical analysis by untargeted liquid chromatography-high resolution mass spectrometry and data processing via MZmine and FBMN-GNPS confirmed the presence of a wide diversity of secondary metabolites. In addition, similarity analysis applying the newly developed tool DBsimilarity indicated the broad coverage of various biosynthetic and chemical classes of compounds previously reported for cyanobacteria. This report is one of the first applications of untargeted metabolomics workflow and similarity network construction for groups of marine filamentous cyanobacteria isolated from benthic mats on corals reefs. Full article

This study explored the biodiversity of Fucales along the islands of Lipari and Vulcano, almost ten years after the last studies on the phytobenthos of these islands. To carry out this research, a monitoring activity was conducted through both scuba dives and snorkelling activities. Through this study, a total of 13 species (four belonging to Cystoseira, three to Ericaria, two to Gongolaria, and four to Sargassum) was observed. When comparing the present data with past studies, nine species were previously reported, ten taxa were not found in the present study, and four taxa were reported here for the first time in the Aeolian Archipelago. The alpha (local) diversity was higher in Vulcano than in Lipari. Moreover, the beta (turnover) diversity showed a different assemblage in species grouping between the two islands. Since some of the observed species are currently considered rare or in regression, their finding in the Aeolian Archipelago is of particular interest. Therefore, they should receive special consideration, particularly in light of the possible future establishment of a marine protected area (MPA) in the Aeolian Archipelago. Full article

The structure of phytobenthic diatom communities was studied to reveal differences between natural and channelized river sections in Slovenia. As part of the national monitoring of surface waters, samples of phytobenthos were collected at 85 sites throughout the country according to standard protocols. At the same time, basic environmental parameters were also assessed. Trophic (TI) and saprobic (SI) indices were calculated based on diatoms and other algae, while diversity indices and gradient analyses were performed only for the diatom community. The results showed that channelized rivers harbor significantly more diverse benthic diatom communities than natural sections, mainly due to the significantly higher number of motile diatom taxa that are able to take advantage of more nutrient-rich and less-shaded river sections because of their high adaptability. Selected environmental parameters explained 34% of the variability in diatom community structure when taxa were classified into ecological types. The removal of Achnanthidium minutissimum yielded clearer results (24.1%) than the total species matrix (22.6%). Therefore, we suggest excluding this taxon from calculations of TI, SI, or other indices when it is determined as A. minutissimum complex, because A. minutissimum complex was most abundant in both types of reaches in our study and has a wide ecological amplitude, which reduces the indicative power of the diatom community in the evaluation of environmental conditions and ecological status. Full article

Phytobenthos, major primary producers in freshwater, may be periodically exposed to herbicides through runoff, spray drift, and leaching, but experimental work on their response to herbicides is limited. Outdoor flumes were used to measure the recovery of intact phytobenthic biofilms, following a short-term pulse to a glyphosate-based herbicide (GBH) and chlorotoluron (CLT), singly or as a mixture (GBHC). Two days following the removal of the herbicides, significant declines in biomass and rates of areal gross maximum photosynthesis were recorded in GBH and GBHC-treated flumes. Herbicide pulses negatively impacted the biomass of phytobenthos, measured as chlorophyll a, which in turn may have alleviated resource limitation, evidenced by significant increases in biomass-specific rates of gross maximum photosynthesis. After 4.5 days, biomass concentrations were similar in controls and treatments, indicating biofilm recovery in the GBH and GBHC biofilms, though the proportion of green algae relative to diatoms was significantly higher in GBH and GBHC-impacted biofilms. Significant increases were recorded in the Trophic Diatom Index (TDI), indicating benthic diatom development along different trajectories, following the herbicide pulse. Collectively, these results indicate greater insights into herbicide impacts on phytobenthos may be gained by working with the whole phytobenthic community. Full article

The present study aimed to detect any changes in concentrations of nutrients and evaluate the impact on the quality of two hemiboreal streams that collect a discharge from two fertilized Scots pine stands. In 2017, nitrogen-containing mineral fertilizer was spread in pine stands on mineral soil located near the first stream. In 2018, potassium containing wood ash was spread in pine stands on organic soil near the second stream. From 2017 to 2020, surveys of physico-chemical parameters, diatoms, macrophytes, and macroinvertebrates were performed to determine the possible effects of fertilization on the ecological quality of the streams. A control site upstream of the fertilized forest stand and a treatment site downstream of the fertilized forest stand was monitored at each stream. Water quality indices, chemical parameters of surface water, and indicator species analysis showed no short-term impact of forest soil improvement with wood ash and ammonium nitrate. We found no clear patterns before and after the fertilization events in both streams, although we did observe inter- and intra-annual differences in aquatic biota and stream ecological quality mainly caused by local environmental factors. Full article

In the context of increasing occurrences of toxic cyanobacterial blooms worldwide, their monitoring in Belgium is currently performed by regional environmental agencies (in two of three regions) using different protocols and is restricted to some selected recreational ponds and lakes. Therefore, a global assessment based on the comparison of existing datasets is not possible. For this study, 79 water samples from a monitoring of five lakes in Wallonia and occasional blooms in Flanders and Brussels, including a canal, were analyzed. A Liquid Chromatography with tandem mass spectrometry (LC-MS/MS) method allowed to detect and quantify eight microcystin congeners. The mcyE gene was detected using PCR, while dominant cyanobacterial species were identified using 16S RNA amplification and direct sequencing. The cyanobacterial diversity for two water samples was characterized with amplicon sequencing. Microcystins were detected above limit of quantification (LOQ) in 68 water samples, and the World Health Organization (WHO) recommended guideline value for microcystins in recreational water (24 µg L⁻¹) was surpassed in 18 samples. The microcystin concentrations ranged from 0.11 µg L⁻¹ to 2798.81 µg L⁻¹ total microcystin. For 45 samples, the dominance of the genera Microcystis sp., Dolichospermum sp., Aphanizomenon sp., Cyanobium/Synechococcus sp., Planktothrix sp., Romeria sp., Cyanodictyon sp., and Phormidium sp. was shown. Moreover, the mcyE gene was detected in 75.71% of all the water samples. Full article

The European Water Framework Directive 2000/60/EC (WFD) has been implemented over the past 20 years, using physicochemical, biological and hydromorphological elements to assess the ecological status of surface waters. Benthic diatoms (i.e., phytobenthos) are one of the most common biological quality elements (BQEs) used in surface water monitoring and are particularly successful in detecting eutrophication, organic pollution and acidification. Herein, we reviewed their implementation in river biomonitoring for the purposes of the WFD, highlighting their advantages and disadvantages over other BQEs, and we discuss recent advances that could be applied in future biomonitoring. Until now, phytobenthos have been intercalibrated by the vast majority (26 out of 28) of EU Member States (MS) in 54% of the total water bodies assessed and was the most commonly used BQE after benthic invertebrates (85% of water bodies), followed by fish (53%), macrophytes (27%) and phytoplankton (4%). To meet the WFD demands, numerous taxonomy-based quality indices have been developed among MS, presenting, however, uncertainties possibly related to species biogeography. Recent development of different types of quality indices (trait-based, DNA sequencing and predictive modeling) could provide more accurate results in biomonitoring, but should be validated and intercalibrated among MS before their wide application in water quality assessments. Full article

The Sasyk Reservoir is one of the largest seaside reservoirs in Ukraine, artificially maintained as a freshwater area including various floodplain areas. The Reservoir originated from an estuary to now being an almost freshwater reservoir. The diatoms (Bacillariophyta) in benthos were investigated for analyzing the coastal zone diversity of the Black Sea inside the borders of Ukraine. The indicated diatom composition was formed by 97 species (100 infraspecies taxa). Some rare marine and freshwater taxa were noted, as well as three species reported in Ukrainian territory for the first time (Navicula vandamii Schoeman et R.E.M. Archibald, Sellaphora difficillima (Hustedt) C.E. Wetzel, L. Ector et D.G. Mann, and Mastogloia laterostrata Hustedt). The bioindicative characteristics of the diatom composition testified to the freshwater condition of the reservoir. Changes to the salinity level of the Sasyk Reservoir were exposed due to the composition of benthic diatoms. The presence of mesohalobous species (7 taxa) acknowledges conditions that are typical for estuaries and mouths of rivers and reveals the salinity changes in the Sasyk Reservoir. Likewise, the prevailing number of oligohalobous diatoms (61 taxa) reveal presence of freshwater in the reservoir. The implementation of the Polish phytobenthos lake assessment method for the nearby Ukrainian Reservoir was conducted for the first time. The multimetric Diatom Index for lake values varied from 0.39 to 0.76, and revealed alterations in the status over the Sasyk sites, ranging from good, moderate, to poor. Thus, it may be concluded that the current ecological status relating to the composition of benthic diatoms of the reservoir located in the coastal zone of the Black Sea is evaluated as having a moderate status class with some exceptions. Full article

The aim of this work is to simulate the dissolved oxygen deficiency in the coastal zone that sometimes occurs during the summer water stagnation. We consider the main components of the marine ecosystem that play a major role in such processes—concentrations of nitrogen, phosphorus and sulfur compounds in water, dissolved and particular organic matter, oxygen, biomass of phytoplankton and macroalgae. We use the object-based modeling technique to simulate the spatio-temporal variability of the ecosystem in a 2D domain. In comparison with the traditional approach, it gives several advantages: more precise parametrizations of the biological components’ functionality; higher spatial resolution; possibility to account for the individual variability of hydrobionts; easy inclusion of an arbitrary number of species in the model. Our model included three species of phytoplankton and seven macroalgae. Individual-based modules control their functionality. Species of phytoplankton and seaweeds chosen for simulations are typical for the coastal zone of Crimea. In the simulations, we study the contribution of micro- and macroalgae to the processes of self-purification of a semi-enclosed basin in case of a sharp increase in nutrient concentration in water. Full article

Freshwater ecosystems have been severely damaged worldwide by a multitude of human pressures, such as pollution, nutrient enrichment, damming or overexploitation, and this has been more intense over the past five decades. It is therefore important that the impacts of such stressors can be effectively detected, monitored and assessed in order to provide adequate legislative tools and to protect and restore freshwater ecosystems. The use of aquatic biota to detect, measure and track changes in the environment is often known as freshwater biomonitoring and is based on the premise that the presence or absence of biotic assemblages at a given site reflects its degree of environmental quality. For over a century, since the early pollution-oriented indicators, freshwater monitoring has been developing and testing progressively more complex indicator systems, and increasing the plethora of pressures addressed, using different biological groups, such as benthic macroinvertebrates, macrophytes, fish, phytoplankton and phytobenthos. There is an increasing demand for precision and accuracy in bioassessment. In this Special Issue, five high-quality papers were selected and are briefly presented herein, that cover a wide range of issues and spatial contexts relevant to freshwater biomonitoring. Full article

Substratum collected during diving surveys of sublittoral communities off the Greek island of Rhodes (Dodecanese, South-East Aegean) in late 2015 was incubated in the laboratory. Among the emerging macroalgal germlings, there was the second-ever record and isolate of the small benthic multicellular alga Schizocladia ischiensis of the poorly known monotypic Schizocladiophyceae, the sister group of the brown algae (Phaeophyceae). Its nuclear ribosomal small subunit, Rubisco spacer (rbcL, psaA, and psbC sequences (in total 5237 bp)) were similar to those of the only previous isolate of the species from Ischia, western Mediterranean. Our new strain formed branched upright thalli attached to the substratum by an amorphous substance secreted at the bottom of the basal cell. It is possible that S. ischiensis is a common member of the infralittoral and circalittoral communities in the Mediterranean and generally overlooked because of its minute size. Germling emergence appears to represent the method of choice to reveal benthic algae of this small size. Full article

The Federal State of Saxony (Germany) transposed the EU Water Framework Directive into state law, identifying 617 surface water bodies (rivers and streams) for implementation of the water framework directive (WFD). Their ecological status was classified by biological quality elements (macrophytes and phytobenthos, benthic invertebrates and fish, and in large rivers, phytoplankton) and specific synthetic and non-synthetic pollutants. Hydromorphological and physico-chemical quality elements were used to identify significant anthropogenic pressures, which surface water bodies are susceptible to, and to assess the effect of these pressures on the status of surface water bodies. In 2009, the data for classification of the ecological status and the main pressures and impacts on water bodies were published in the river basin management plans (RBMP) of the Elbe and Oder rivers. To that date, only 23 (4%) streams achieved an ecological status of “good”, while the rest failed to achieve the environmental objective. The two main reasons for the failure were significant alterations to the stream morphology (81% of all streams) and nutrient enrichment (62%) caused by point (industrial and municipal waste water treatment plants) and non-point (surface run-off from arable fields, discharges from urban drainages and decentralized waste water treatment plants) sources. It was anticipated that a further 55 streams would achieve the environmental objective by 2015, but the remaining 539 need extended deadlines. Full article