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Keywords = petrified tree

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20 pages, 3072 KB  
Article
First Microbial Survey of a Submerged Petrified Forest in the Black Sea: Culture-Based and Metagenomic Insights
by Mihail Iliev, Ralitsa Ilieva, Slavil Peykov, Viktoria Terziyska, Anton Pelkin and Lyubomir Kenderov
Diversity 2025, 17(8), 583; https://doi.org/10.3390/d17080583 - 20 Aug 2025
Viewed by 800
Abstract
The submerged petrified forest in Sozopol Bay, located along Bulgaria’s southeastern coast in the Black Sea, is an extraordinarily rare natural phenomenon that has remained unexplored in terms of microbial diversity until now. This study focuses on characterizing the microbial communities associated with [...] Read more.
The submerged petrified forest in Sozopol Bay, located along Bulgaria’s southeastern coast in the Black Sea, is an extraordinarily rare natural phenomenon that has remained unexplored in terms of microbial diversity until now. This study focuses on characterizing the microbial communities associated with this unique habitat. Ancient petrified tree remnants located at depths of 18–20 m were sampled in August–September 2024, targeting four tree trunks from different sites within the bay. The quantitative assessment of selected bacterial groups, essential for nutrient cycling, organic matter degradation, and marine ecosystem health, revealed distinct community profiles. 16S rDNA sequencing of cultivated isolates identified a diverse microbial community predominantly composed of γ-Proteobacteria, with key representatives such as Vibrio aestuarianus, Vibrio orientalis, Pseudoalteromonas, and Cobetia sp. The culture-independent approach confirmed the dominance of Proteobacteria, along with other prevalent phyla like Bacteroidetes, Planctomycetes, and Actinobacteria. The most abundant taxa included Woeseia oceani, Ilumatobacter coccineus, Halioglobus maricola, and Vibrio breoganii. Archaea made up about 3% of classified reads. Fungal sequences accounted for less than 2% of the total reads, indicating a low fungal prevalence. These results provide essential baseline data for future monitoring and the conservation of this unique habitat and its diverse microbial communities. Full article
(This article belongs to the Special Issue Diversity in 2025)
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33 pages, 12144 KB  
Article
Initial Discoveries from the Rhizoliths Petrified Forest of Chania
by Emmanouil Manoutsoglou
Heritage 2025, 8(7), 242; https://doi.org/10.3390/heritage8070242 - 22 Jun 2025
Viewed by 4884
Abstract
This study presents the initial scientific characterization of the recently discovered Rhizoliths Petrified Forest of Chania, located at Stavros in the Akrotiri peninsula of Crete, Greece. Unlike most known petrified forests that primarily preserve tree trunks, this site uniquely features an abundance of [...] Read more.
This study presents the initial scientific characterization of the recently discovered Rhizoliths Petrified Forest of Chania, located at Stavros in the Akrotiri peninsula of Crete, Greece. Unlike most known petrified forests that primarily preserve tree trunks, this site uniquely features an abundance of rhizoliths—fossilized root systems preserved through calcium carbonate mineralization. The rhizoliths exist within aeolianite formations along the coastal front, with diverse morphologies and sizes ranging from small trace-like forms to massive, branched structures exceeding one meter in length. The rhizoliths are exposed within historic Venetian quarries that operated from Minoan times through the medieval period at Stavros Bay, where quarrying operations have revealed these fossilized root systems preserved in coastal dune deposits. The site also contains in situ petrified trunks, calcrete formations, and biokarstic dissolution features that further enhance its scientific value. Microscopic examination of rhizolith samples has revealed valuable information about their internal structure, showing clear biogenic characteristics. The preservation of rhizolith structures and associated sedimentary features provides valuable insight into the Quaternary paleoenvironment, including former vegetation patterns, soil stabilization processes, and paleoclimatic conditions. The alternating layers of aeolianites and paleosols suggest cyclical environmental changes, with periods of active dune formation alternating with more stable conditions allowing soil development and vegetation establishment. This study documents the Stavros rhizoliths and their paleoenvironmental significance, contributing to the comparative understanding of similar features documented at other global sites. Full article
(This article belongs to the Section Geoheritage and Geo-Conservation)
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19 pages, 8304 KB  
Article
Visualisation of Fossilised Tree Trunks for XR, Using Geospatial Digitisation Techniques Derived from UAS and Terrestrial Data, Aided by Computational Photography
by Charalampos Psarros, Nikolaos Zouros and Nikolaos Soulakellis
Electronics 2025, 14(6), 1146; https://doi.org/10.3390/electronics14061146 - 14 Mar 2025
Viewed by 793
Abstract
The aim of this research is to investigate and use a variety of immersive multisensory media techniques in order to create convincing digital models of fossilised tree trunks for use in XR (Extended Reality). This is made possible through the use of geospatial [...] Read more.
The aim of this research is to investigate and use a variety of immersive multisensory media techniques in order to create convincing digital models of fossilised tree trunks for use in XR (Extended Reality). This is made possible through the use of geospatial data derived from aerial imaging using UASs, terrestrial material captured using cameras and the incorporation of both the visual and audio elements for better immersion, accessed and explored in 6 Degrees of Freedom (6DoF). Immersiveness is a key factor of output that is especially engaging to the user. Both conventional and alternative methods are explored and compared, emphasising the advantages made possible with the help of Machine Learning Computational Photography. The material is collected using both UAS and terrestrial camera devices, including a multi-sensor 3D-360° camera, using stitched panoramas as sources for photogrammetry processing. Difficulties such as capturing large free-standing objects using terrestrial means are overcome using practical solutions involving mounts and remote streaming solutions. The key research contributions are comparisons between different imaging techniques and photogrammetry processes, resulting in significantly higher fidelity outputs. Conclusions indicate that superior fidelity can be achieved through the help of Machine Learning Computational Photography processes, and higher resolutions and technical specs of equipment do not necessarily translate into superior outputs. Full article
(This article belongs to the Special Issue AI Synergy: Vision, Language, and Modality)
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15 pages, 3398 KB  
Review
Dating Amber: Review and Perspective
by Su-Chin Chang, Yuling Li and Daran Zheng
Minerals 2023, 13(7), 948; https://doi.org/10.3390/min13070948 - 15 Jul 2023
Cited by 5 | Viewed by 4470
Abstract
Amber is a fossilized tree resin that ranges in age from the Carboniferous to the Cenozoic. It occurs globally from the Arctic to Antarctica. As the resin petrifies and turns into amber, it can enclose and preserve other materials. Amber with inclusions can [...] Read more.
Amber is a fossilized tree resin that ranges in age from the Carboniferous to the Cenozoic. It occurs globally from the Arctic to Antarctica. As the resin petrifies and turns into amber, it can enclose and preserve other materials. Amber with inclusions can help reconstruct past biodiversity and ecosystems. Some amber contains fossils representing the oldest and most detailed records of critical evolutionary traits or markers. Inclusions can even capture behavioral indicators previously only observed in extant organisms. Evidence of insect pollination of flowering plants and dragonfly mating behavior appears in amber, as does the morphological specialization of insects, indicating sociality and social parasitism. Dating amber deposits can help calibrate evolutionary events and inform reconstructions of past ecosystems. While the direct dating of amber remains impossible, age constraints on most amber deposits are based on correlations or relative dating, methods that come with significant uncertainties. This study discusses two cases using 40Ar/39Ar and U–Pb geochronologic methods to constrain the ages of amber deposits in China and the paleo-ecosystems they record. This paper also summarizes how radio-isotopic dating and other techniques combined with the analysis of inclusions in amber can help elucidate biogeography and the dynamic relationship between life and the physical environment. Full article
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17 pages, 2258 KB  
Article
How Can the Engineering Parameters of the NIR Grader Affect the Efficiency of Seed Grading?
by Tatyana P. Novikova, Clíssia Barboza Mastrangelo, Paweł Tylek, Svetlana A. Evdokimova and Arthur I. Novikov
Agriculture 2022, 12(12), 2125; https://doi.org/10.3390/agriculture12122125 - 10 Dec 2022
Cited by 14 | Viewed by 2191
Abstract
The automated grading of Scots pine seeds in the near-infrared wavelength region (NIR grading) is a starting point for further actions, such as coating and priming. This reduces the time and financial costs and increases the accuracy of seed viability classification compared to [...] Read more.
The automated grading of Scots pine seeds in the near-infrared wavelength region (NIR grading) is a starting point for further actions, such as coating and priming. This reduces the time and financial costs and increases the accuracy of seed viability classification compared to invasive techniques. The NIR-based wave reflected from each pine seed must be detected and processed with sufficient accuracy. To focus the reflected beam, we used fiber-optic Bragg grating, a Bragg mirror, and diffraction grating. For each focusing option based on the DOE matrix, one experiment of 20 runs (n = 20) and three replicas (m = 3) in each run was conducted. In each replica, we used 100 conditioned and 100 non-conditioned seeds (NC + NNC = 200) selected randomly from five samples weighing 50 g from a seedlot weighing 1 kg extracted from cones collected from a natural tree stand. Three experiments were conducted on the NIR grading of Scots pine seeds using an optoelectronic device. An adequate DOE regression model of the grading efficiency function was obtained. The functions included the following arguments: angle of incidence of the optical beam, NIR wavelength reflected from the seed, and height of the seed pipeline. The influence of the inclination angle of the light source relative to the plane of pine seed movement on the grading quality prevails over other factors. The NIR grading of Scots pine seeds allows the separation of seeds according to the viability index, which is important, since dead petrified seeds (possibly up to 25%) may occur in the seed batch, which cannot be eliminated by either seed size or mass. The peak of NIR grading is achieved by combining the average grader engineering parameters: 968–973 nm for the wavelength and 44–46 degrees for the inclination angle of the reflected beam at a seed pipe size of 0.18–0.23 m. Full article
(This article belongs to the Special Issue Recent Advances in Modern Seed Technology)
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24 pages, 14925 KB  
Article
Puyango, Ecuador Petrified Forest, a Geological Heritage of the Cretaceous Albian-Middle, and Its Relevance for the Sustainable Development of Geotourism
by Fernando Morante-Carballo, Geanella Herrera-Narváez, Nelson Jiménez-Orellana and Paúl Carrión-Mero
Sustainability 2020, 12(16), 6579; https://doi.org/10.3390/su12166579 - 14 Aug 2020
Cited by 18 | Viewed by 6159
Abstract
Geodiversity treaties have multiplied and given rise to geological heritage as a singular value of protection and preservation for territories. The Puyango Petrified Forest (PPF) is a recognized Ecuadorian reserve, which was declared a National Heritage Treasure. It has an area of 2659 [...] Read more.
Geodiversity treaties have multiplied and given rise to geological heritage as a singular value of protection and preservation for territories. The Puyango Petrified Forest (PPF) is a recognized Ecuadorian reserve, which was declared a National Heritage Treasure. It has an area of 2659 hectares, and it is located in the south of Ecuador, between the provinces of El Oro and Loja. The petrified trunks and trees were buried by volcanic lava, dating from the Cretaceous Period, 96 to 112 million years ago. Thus, silicification and carbonization, two important fossilization events, have produced hundreds of samples of paleontological wealth in Puyango. The objective of this work is to methodologically assess the geodiversity of a fraction of the PPF by registering its geological heritage and value for its preservation and sustainable development. The methodology is based on: (i) Analysis of information on the territory used for tourist visits, as a pilot study area. Presentation of paleontological components and their main sections to enhance their geotouristics value; (ii) Assessment of the geological heritage for its geotourism categorization with a recognized scientific methodology and one proposed by the co-authors propose; and (iii) Analysis of Strengths, Weaknesses, Opportunities, and Threats (SWOT) as a guide for protection and development strategies. Findings reveal the high geotourism potential for a Geopark Project in Puyango, since only 300 hectares are used for tourism and the remaining area is a virgin environment for research and improving knowledge of geodiversity and biodiversity. Full article
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16 pages, 9016 KB  
Article
Geovisualization of the Excavation Process in the Lesvos Petrified Forest, Greece Using Augmented Reality
by Ermioni-Eirini Papadopoulou, Vlasios Kasapakis, Christos Vasilakos, Apostolos Papakonstantinou, Nikolaos Zouros, Athanasia Chroni and Nikolaos Soulakellis
ISPRS Int. J. Geo-Inf. 2020, 9(6), 374; https://doi.org/10.3390/ijgi9060374 - 7 Jun 2020
Cited by 10 | Viewed by 3745
Abstract
Augmented reality (AR), in conjunction with 3D geovisualization methods, can provide significant support in monitoring geoconservation activities in protected geosites, such as the excavation process in fossil sites. The excavation process requires a monitoring methodology that will provide a complete and accurate overview [...] Read more.
Augmented reality (AR), in conjunction with 3D geovisualization methods, can provide significant support in monitoring geoconservation activities in protected geosites, such as the excavation process in fossil sites. The excavation process requires a monitoring methodology that will provide a complete and accurate overview of the fossils, their dimensions, and location within the different pyroclastic horizons, and the progress of the excavation works. The main purpose of this paper is the development of a user-friendly augmented map application, specifically designed for tracking the position of petrified tree trunks, providing information for their geometric features, and mapping the spatiotemporal changes occurring in the surrounding space. It also aims to probe whether the rapid acquisition of a 4K video can generate cartographic derivatives of petrified findings during a geosite excavation. A database accumulated 2D and 3D cartographic information, while the geovisualization environment displayed the surface alterations, at two scales: a) 1:500 (excavation area) and b) 1:50 (trench level). Unmanned aerial systems (UASs), used for data acquisition in three excavation periods, consisted of two flights at two different altitudes: one to record changes throughout the study area and the other to provide information on trunks at trench level, via a high-resolution (4K) video. Image-based 3D modeling followed, in which image georeferencing was conducted with ground control points (GCPs). Finally, 2D and 3D geovisualizations were created to depict the excavation changes through time. The cartographic products generated at two cartographic scales depicted the spatiotemporal changes of the excavation. Full article
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20 pages, 15877 KB  
Article
Multi-Stage Silicification of Pliocene Wood: Re-Examination of an 1895 Discovery from Idaho, USA
by Mike Viney, Dagmar Dietrich, George Mustoe, Paul Link, Thomas Lampke, Jens Götze and Ronny Rößler
Geosciences 2016, 6(2), 21; https://doi.org/10.3390/geosciences6020021 - 26 Apr 2016
Cited by 20 | Viewed by 8290
Abstract
The 1895 discovery of a petrified tree near Clover Creek in south-central Idaho, USA, attracted worldwide attention and resulted in the naming of a new species of ancient oak, Quercinium pliocaenicum Schuster. For more than a century, the discovery has largely been forgotten, [...] Read more.
The 1895 discovery of a petrified tree near Clover Creek in south-central Idaho, USA, attracted worldwide attention and resulted in the naming of a new species of ancient oak, Quercinium pliocaenicum Schuster. For more than a century, the discovery has largely been forgotten, even though specimens reside in reputable museums. Reinvestigation of the locality in 2014/2015 resulted in newly-collected specimens and a wealth of new data. Optical microscopy confirms the cellular anatomy used for the original taxonomic study. X-ray diffraction, scanning electron microscopy, energy-dispersive electron spectroscopy, Raman spectroscopy and cathodoluminescence microscopy reveal details of the mineralization, showing the presence of opal-CT as the primary component, with chalcedony as a lesser constituent. This mineralogy suggests petrifaction occurred in at least two stages, beginning with opalization of cellular tissue, leaving open vessels that became filled with chalcedony during a later mineralization episode. Clover Creek oak represents relict flora growing in a wetter climate before the uplift of the Cascade Range created a rain shadow that caused profound desertification of the inland Pacific Northwest. Full article
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